View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4381_low_3 (Length: 786)

Name: NF4381_low_3
Description: NF4381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4381_low_3
NF4381_low_3
[»] chr2 (46 HSPs)
chr2 (1-767)||(39458734-39459514)
chr2 (3-684)||(39473287-39473990)
chr2 (154-700)||(39152240-39152756)
chr2 (247-696)||(39369836-39370285)
chr2 (1-245)||(39222325-39222569)
chr2 (431-698)||(39421696-39421963)
chr2 (394-694)||(39137757-39138045)
chr2 (325-562)||(39215438-39215675)
chr2 (99-331)||(39137399-39137631)
chr2 (438-680)||(39414664-39414906)
chr2 (3-189)||(39390455-39390641)
chr2 (156-331)||(39422042-39422217)
chr2 (399-609)||(39161722-39161932)
chr2 (399-609)||(39207262-39207472)
chr2 (403-680)||(39397731-39398008)
chr2 (42-195)||(39458607-39458760)
chr2 (487-698)||(39381375-39381586)
chr2 (3-218)||(39390216-39390431)
chr2 (36-227)||(39603211-39603402)
chr2 (384-629)||(39468204-39468449)
chr2 (36-245)||(39603001-39603210)
chr2 (171-331)||(39487744-39487904)
chr2 (487-609)||(39389090-39389212)
chr2 (38-135)||(39192552-39192649)
chr2 (38-135)||(39198232-39198329)
chr2 (36-136)||(39451761-39451861)
chr2 (333-419)||(39414883-39414969)
chr2 (399-562)||(39222765-39222928)
chr2 (221-331)||(44614579-44614689)
chr2 (344-461)||(39137665-39137782)
chr2 (198-310)||(39415097-39415209)
chr2 (487-562)||(39192440-39192515)
chr2 (487-562)||(39198120-39198195)
chr2 (541-628)||(44624027-44624114)
chr2 (36-94)||(39415739-39415797)
chr2 (208-329)||(39222238-39222359)
chr2 (72-133)||(39468207-39468268)
chr2 (357-425)||(2361517-2361585)
chr2 (355-419)||(39381612-39381676)
chr2 (198-330)||(39415545-39415677)
chr2 (281-328)||(39161835-39161882)
chr2 (281-328)||(39207312-39207359)
chr2 (344-387)||(39421965-39422008)
chr2 (198-252)||(39467934-39467988)
chr2 (142-263)||(39221311-39221432)
chr2 (206-299)||(39389673-39389766)
[»] chr7 (3 HSPs)
chr7 (36-331)||(19807286-19807581)
chr7 (394-693)||(19807707-19807994)
chr7 (344-461)||(19807615-19807732)
[»] chr5 (1 HSPs)
chr5 (40-332)||(17059267-17059559)
[»] chr6 (1 HSPs)
chr6 (399-699)||(16113179-16113479)
[»] chr8 (2 HSPs)
chr8 (523-625)||(45342054-45342156)
chr8 (150-315)||(40347343-40347508)
[»] chr3 (2 HSPs)
chr3 (235-329)||(51574930-51575024)
chr3 (198-254)||(51574562-51574618)


Alignment Details
Target: chr2 (Bit Score: 702; Significance: 0; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 702; E-Value: 0
Query Start/End: Original strand, 1 - 767
Target Start/End: Original strand, 39458734 - 39459514
Alignment:
Q  1 ctaaagagaagcaacttgatggtcgaggggaagaacatgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttt 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39458734 ctaaagagaagcaacttgatggccgaggggaagtacatgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttt 39458833  T
Q  101 tgaaagtcaagtggaggagctcaaatcaaaagagagacaagtgaaaggacaagttaaggaacttgagtgtaaagagaagaaaattgatggccgagcaaag 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39458834 tgaaagtcaagtggaggagctcaaatcaaaagagagacaattgaaaggacaagttaaggaacttgagtgtaaagagaagaaaattgatggtcgagcaaag 39458933  T
Q  201 gagattgaatcaaaagaggatgaatttgaaggccgggtgaaggagttggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39458934 gagattgaatcaaaagaggatgaatttgaaggccgggtgaaggagttggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaag 39459033  T
Q  301 aaaagcaatttgaaggacaagtgaaggagtttaaaggtcaagggaaggagtttgaatcaaagaaggaggaattcaaaggtcaggttaagcagctcaattc 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39459034 aaaagcaatttgaaggacaagtgaaggagtttaaaggtcaagggaaggagtttgaatcaaataaggaggaattcaaaggtcaggttaagcagctcaattc 39459133  T
Q  401 aaaaaagaagcaatttgaaagccagtttgaggacttaaaattaaaagagaagcaatttgaagaacagcggaaagaattcgaggctgaagagaataagttc 500  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39459134 aaaaaagaagcaatttgaaagccagtttgaggacttcaaattaaaagagaagcaatttgaagaacagcggaaagaattcgatgctgaagagaataagttc 39459233  T
Q  501 aaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattttgatggacaagtgaagg 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39459234 aaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattttgatggacaagtgaagg 39459333  T
Q  601 agcctgagttgacagtgaaacaatatgaaccattaatgaactattttgatgaggaaacagaatcgggtaagtgttcttattcatttagcttattgaa--- 697  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  39459334 agcctgagttgacagtgaaacaatatgaaccattaatgaactattttgatgaggaaacagaatcgggtaagtgttcttattcatttagcttattgaaaat 39459433  T
Q  698 -----------aatttcatttaatgatgtgttattttttacaacctgatctacacatatgagggagcttaaaggtaggaat 767  Q
               ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39459434 ttcatttcaacaatttcatttaatgatgtgttattttttataacctgatctacacatatgagggagcttaaaggtaggaat 39459514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 3 - 684
Target Start/End: Complemental strand, 39473990 - 39473287
Alignment:
Q  3 aaagagaagcaacttgatggtcgaggggaagaacatgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttttg 102  Q
    ||||||||||| |||||||| |||| ||| || ||| |||||||| |||||||||| ||| |||| ||||||| ||| ||||||||||||||   ||| |    
T  39473990 aaagagaagcagcttgatggccgagtggaggagcataaatcaaaacagagagaatttgaaagccaggtgaaggggctagaatctaaaaagaagaatttag 39473891  T
Q  103 aaagtcaagtggaggagctcaaatcaaaagagagacaagtgaaaggacaagttaaggaacttgagtgtaaagag-aagaaaattgatggccgagcaaagg 201  Q
    |||  ||||||||||| ||||||||| |||| |||||| ||||||||||||||||||||||||||| | |  || ||| || |||||| | |||  ||||    
T  39473890 aaatgcaagtggaggatctcaaatcagaagaaagacaattgaaaggacaagttaaggaacttgagtctgacaaggaagcaacttgatgtcagagtgaagg 39473791  T
Q  202 agattgaatcaaaagaggatgaatttgaaggccgggtgaaggagttggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaaga 301  Q
     | | ||| |||| |||| |||| |||||||  |||||||| ||  ||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  39473790 ggttagaaccaaaggagggtgaacttgaagggtgggtgaagaagccggaatcagaaaagaagcatttcgagagccaactgaaggagctcgaatcaaaaga 39473691  T
Q  302 aaagcaatttgaaggacaagtgaaggagtt---------------------taaaggtcaagggaaggagtttgaatcaaagaaggaggaattcaaaggt 380  Q
    |||| ||||| | |||||||||||||||||                     |||  |||||| |||||||||| || | |||||||||||||||||||||    
T  39473690 aaagaaatttaatggacaagtgaaggagttccagtcaaaagaggaggaatttaacagtcaagtgaaggagtttaaaacgaagaaggaggaattcaaaggt 39473591  T
Q  381 caggttaagcagctcaattcaaaaaagaagcaatttgaaagccagtttgaggacttaaaattaaaagagaagcaatttgaagaacagcggaaagaattcg 480  Q
    | ||||||| |||| || | |||||||||||||||| ||| | || ||||||| || |||| || || |||||||||||||||||   |||||||| |||    
T  39473590 cgggttaaggagcttaaataaaaaaagaagcaatttaaaaccaaggttgaggaattcaaatcaatagcgaagcaatttgaagaacgatggaaagaactcg 39473491  T
Q  481 aggctgaagagaataagttcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataa 580  Q
    || |  ||||||||||||||||||||||||||||    |||||||||||||| |||||  |||||||| ||||| ||||||| ||||||||||| |||||    
T  39473490 agtcaaaagagaataagttcaaagtactagtgaagtcactcaagttaaaagagaagcaggttgaaggagaagtcgaggatcccgagtcaaagctaaataa 39473391  T
Q  581 ttttgatggacaagtgaaggagcctgagttgacagtgaaacaatatgaaccattaatgaactattttgatgaggaaacagaatcgggtaagtgttcttat 680  Q
       |||||||  |  |||||||||||||||||||| ||||| ||||||||||||||| || |||||||||||||||| |||||||||||| |||||||||    
T  39473390 acatgatggaacaccgaaggagcctgagttgacagagaaacgatatgaaccattaataaaatattttgatgaggaaatagaatcgggtaaatgttcttat 39473291  T
Q  681 tcat 684  Q
    ||||    
T  39473290 tcat 39473287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 154 - 700
Target Start/End: Original strand, 39152240 - 39152756
Alignment:
Q  154 ttaaggaacttgagtgtaaagagaagaaaattgatggccgagcaaaggagattgaatcaaaagaggatgaatttgaaggccgggtgaaggagttggaatc 253  Q
    ||||||||||||||| |||||||||  || ||||||| ||||  |||| | |||||||||||||||||||||||||||||| ||||||| || |||||||    
T  39152240 ttaaggaacttgagtctaaagagaaacaacttgatggacgagtgaaggggtttgaatcaaaagaggatgaatttgaaggccaggtgaagaagctggaatc 39152339  T
Q  254 agaaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaagaaaagcaatttgaaggacaagtgaaggagtttaaaggtcaagggaaggagttt 353  Q
    |||||||||||||||||||||| | |||||||||||||||||||  |||||| ||||    || | ||||||| ||||||||    ||||||||          
T  39152340 agaaaagaagcatttcgagagccgactgaaggagctcgaatcaatggaaaaggaattcaccggtctagtgaagaagtttaaa---aaagggaag------ 39152430  T
Q  354 gaatcaaagaaggaggaattcaaaggtcaggttaagcagctcaattcaaaaaagaagcaatttgaaagccagtttgaggacttaaaattaaaagagaagc 453  Q
                |||||||||||||||||||||||| |||| || |||||||||||| ||||||||| |||| |||||||||| |||  |||||||||||    
T  39152431 ------------gaggaattcaaaggtcaggttaaggagcttaaatcaaaaaagaagaaatttgaaatccaggttgaggacttcaaaacaaaagagaagc 39152518  T
Q  454 aatttgaagaacagcggaaagaattcgaggctgaagagaataagttcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagt 553  Q
    |||||||| ||| | |||||||  ||||| |  ||||||||||          | |||||| ||||||||||||||||| |||||  |||||| | |||     
T  39152519 aatttgaaaaacggtggaaagagctcgagtcaaaagagaataa---------tccagtgaaggagctcaagttaaaagagaagcagcttgaagtagaagc 39152609  T
Q  554 caaggatccagagtcaaagcttaataattttgatggacaagtgaaggagcctgagttgacagtgaaacaatatgaaccattaatgaactattttgatgag 653  Q
    ||||||||  ||||||||||| |||||   |||||||||   |||||||| ||| ||||||| ||||||||||| ||||||||| || ||||||||||||    
T  39152610 caaggatcttgagtcaaagctaaataaacatgatggacagtcgaaggagcatgatttgacagagaaacaatatggaccattaataaaatattttgatgag 39152709  T
Q  654 gaaacagaatcgggtaagtgttcttattcatttagcttattgaaaat 700  Q
    |||| |||||| ||||| |||| |||||  | ||| |||||||||||    
T  39152710 gaaatagaatcaggtaaatgtttttatttgtctagtttattgaaaat 39152756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 247 - 696
Target Start/End: Original strand, 39369836 - 39370285
Alignment:
Q  247 tggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaagaaaagcaatttgaaggacaagtgaaggagtttaaaggtcaagggaa 346  Q
    ||||||| |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| || |||    
T  39369836 tggaatcggaaaagaagcatatcgagagcagactgcaggagctcgaatcaaaagaaaagcaatttgaaggacaaaagaaggagtttaaaggtcgagtgaa 39369935  T
Q  347 ggagtttgaatcaaagaaggaggaattcaaaggtcaggttaagcagctcaattcaaaaaagaagcaatttgaaagccagtttgaggacttaaaattaaaa 446  Q
    || | ||||||||||| ||||||||||  ||||||  |||||| || |||| ||| ||| |||||||||||||| |||  | ||| |||| ||||  |||    
T  39369936 ggtgcttgaatcaaaggaggaggaatttgaaggtcgagttaaggagttcaagtcagaaaggaagcaatttgaaacccaagtcgagcacttcaaatcgaaa 39370035  T
Q  447 gagaagcaatttgaagaacagcggaaagaattcgaggctgaagagaataagttcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaag 546  Q
    || ||||||||||||| || | |||||||| | |||    ||||||| ||||||| ||| |  ||||| ||| || | |||||||| ||||| |||| |     
T  39370036 gaaaagcaatttgaaggacggtggaaagaacttgagttaaaagagaacaagttcatagtgcaggtgaaggagttcgaattaaaagagaagcagtttggaa 39370135  T
Q  547 gacaagtcaaggatccagagtcaaagcttaataattttgatggacaagtgaaggagcctgagttgacagtgaaacaatatgaaccattaatgaactattt 646  Q
    |||||||||||| ||  ||||||||| | ||||| || ||||||||| | ||| ||||||||| ||||  ||||||||||||  ||||||   |  || |    
T  39370136 gacaagtcaagggtcttgagtcaaagatgaataaattggatggacaactaaagaagcctgagtcgacaaagaaacaatatgacgcattaacagagcatat 39370235  T
Q  647 tgatgaggaaacagaatcgggtaagtgttcttattcatttagcttattga 696  Q
    ||  ||||||| ||| | |||||| ||||||||||||| ||| |||||||    
T  39370236 tgccgaggaaaaagatttgggtaaatgttcttattcatctagtttattga 39370285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 39222325 - 39222569
Alignment:
Q  1 ctaaagagaagcaacttgatggtcgaggggaagaacatgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttt 100  Q
    ||||||||||||||||||| || | || | | || ||| |||||||| |||||| ||||||||||||  ||||||| || ||||| ||||||||   |||    
T  39222325 ctaaagagaagcaacttgaaggccaagtgaaggagcataaatcaaaagagagaggattcgaaggccaactgaaggaactggaatccaaaaagaagcattt 39222424  T
Q  101 tgaaagtcaagtggaggagctcaaatcaaaagagagacaagtgaaaggacaagttaaggaacttgagtgtaaagagaagaaaattgatggccgagcaaag 200  Q
    ||||| ||||||||||||| |||||||||||||||| ||| |||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||  |||    
T  39222425 tgaaaatcaagtggaggagttcaaatcaaaagagaggcaattgaaaggacaggttaaggaaattgagtctaaagagaagaaatttgatggccgagtgaag 39222524  T
Q  201 gagattgaatcaaaagaggatgaatttgaaggccgggtgaaggag 245  Q
    ||| ||||||| ||||||||||| |||||||||||  ||||||||    
T  39222525 gagtttgaatctaaagaggatgactttgaaggccgaatgaaggag 39222569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 431 - 698
Target Start/End: Complemental strand, 39421963 - 39421696
Alignment:
Q  431 ggacttaaaattaaaagagaagcaatttgaagaacagcggaaagaattcgaggctgaagagaataagttcaaagtactagtgaaagagctcaagttaaaa 530  Q
    |||||| |||||||| |||||| |||||||||||||  |||||||| || || |  ||||||||||||||||||||||||||||||||||||| ||||||    
T  39421963 ggacttcaaattaaacgagaagaaatttgaagaacaatggaaagaactcaagtcaaaagagaataagttcaaagtactagtgaaagagctcaaattaaaa 39421864  T
Q  531 gacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattttgatggacaagtgaaggagcctgagttgacagtgaaacaatatgaac 630  Q
    ||||||| ||||| || || |||||||||||| ||||| ||||| ||||| || |||| |||| ||||||||||||||||||||| |||||| ||||       
T  39421863 gacaagcgatttggagcactagtcaaggatcccgagtcgaagctaaataagttagatgaacaactgaaggagcctgagttgacagagaaacagtatg--- 39421767  T
Q  631 cattaat-ga--actattttgatgaggaaacagaatcgggtaagtgttcttattcatttagcttattgaaa 698  Q
    | ||||| ||  | ||||||||||||||||  ||||| ||||| ||||||||||||| ||  |||||||||    
T  39421766 ctttaatagaagaatattttgatgaggaaaatgaatctggtaaatgttcttattcatctaatttattgaaa 39421696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 394 - 694
Target Start/End: Original strand, 39137757 - 39138045
Alignment:
Q  394 tcaattcaaaaaagaagcaatttgaaagccagtttgaggacttaaaattaaaagagaagcaatttgaagaacagcggaaagaattcgaggctgaagagaa 493  Q
    |||| |||||| |||||||| ||||||||||  | ||||| |  |||| ||||||||||||| ||||||||| | |||||||| ||||| |  |||||||    
T  39137757 tcaaatcaaaagagaagcaacttgaaagccaagtcgaggattacaaatcaaaagagaagcaaattgaagaacggtggaaagaactcgagtcaaaagagaa 39137856  T
Q  494 taagttcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattttgatggacaa 593  Q
    ||||||||||||||| || ||||||||||||||||||||            ||||||  |||||||||| |  ||||||||  |||| ||||||||||||    
T  39137857 taagttcaaagtactggtcaaagagctcaagttaaaaga------------aggacagatcaaggatcctggttcaaagctggataaatttgatggacaa 39137944  T
Q  594 gtgaaggagcctgagttgacagtgaaacaatatgaaccattaatgaactattttgatgaggaaacagaatcgggtaagtgttcttattcatttagcttat 693  Q
     |||||||||||||  |||||| |||||||| |||| |||| || ||||||||||||||||||| ||||||||||||| |||||||||||| ||| ||||    
T  39137945 ttgaaggagcctgaactgacagagaaacaatttgaatcattgataaactattttgatgaggaaaaagaatcgggtaagagttcttattcatctagtttat 39138044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 325 - 562
Target Start/End: Original strand, 39215438 - 39215675
Alignment:
Q  325 aggagtttaaaggtcaagggaaggagtttgaatcaaagaaggaggaattcaaaggtcaggttaagcagctcaattcaaaaaagaagcaatttgaaagcca 424  Q
    |||| ||||||||||||| | ||||| ||||||||||  |||||||||||||||| | ||||||| |||||| || ||||||||||||||||||||| ||    
T  39215438 aggaatttaaaggtcaagtggaggagcttgaatcaaatgaggaggaattcaaaggccgggttaaggagctcagtttaaaaaagaagcaatttgaaagaca 39215537  T
Q  425 gtttgaggacttaaaattaaaagagaagcaatttgaagaacagcggaaagaattcgaggctgaagagaataagttcaaagtactagtgaaagagctcaag 524  Q
      |||||  |||  ||| |||||||||||||||||||| || | |||||||| | |||    |||||||||||||||||||||  || || ||| |||||    
T  39215538 agttgagagctttgaatcaaaagagaagcaatttgaaggacggtggaaagaacttgagttaaaagagaataagttcaaagtacaggtaaaggagttcaag 39215637  T
Q  525 ttaaaagacaagcaatttgaaggacaagtcaaggatcc 562  Q
    |||||||| ||||| |||| ||||||||||||||||||    
T  39215638 ttaaaagagaagcagtttggaggacaagtcaaggatcc 39215675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 99 - 331
Target Start/End: Original strand, 39137399 - 39137631
Alignment:
Q  99 tttgaaagtcaagtggaggagctcaaatcaaaagagagaca-agtgaaaggacaagttaaggaacttgagtgtaaagagaagaaaattgatggccgagca 197  Q
    |||||||| |||||||||||||| |||||||||||||| || ||| || |||||| |||| |||||||||| ||||||||||||| |||||||||||       
T  39137399 tttgaaagccaagtggaggagcttaaatcaaaagagaggcatagtcaa-ggacaatttaaagaacttgagtctaaagagaagaaacttgatggccgactg 39137497  T
Q  198 aaggagattgaatcaaaagaggatgaatttgaaggccgggtgaaggagttggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaa 297  Q
    |||||| |  | | |||||||||||||||||||||| ||||||||||  | ||||| |||||||||||||| |||||| | | |||| |||| ||| ||     
T  39137498 aaggagttaaagttaaaagaggatgaatttgaaggcagggtgaaggaactcgaatctgaaaagaagcattttgagagccgacagaagcagcttgaaacac 39137597  T
Q  298 aagaaaagcaatttgaaggacaagtgaaggagtt 331  Q
    |||||||||||| ||||| |||| ||||||||||    
T  39137598 aagaaaagcaatatgaagaacaaatgaaggagtt 39137631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 438 - 680
Target Start/End: Complemental strand, 39414906 - 39414664
Alignment:
Q  438 aaattaaaagagaagcaatttgaagaacagcggaaagaattcgaggctgaagagaataagttcaaagtactagtgaaagagctcaagttaaaagacaagc 537  Q
    |||| |||||||||||||||||||||||   |||||||| || || |  | ||||||||||||||| |||| || ||||||||||||||||| || || |    
T  39414906 aaatcaaaagagaagcaatttgaagaacgatggaaagaactcaagacaaatgagaataagttcaaactactggtcaaagagctcaagttaaatgagaaac 39414807  T
Q  538 aatttgaaggacaagtcaaggatccagagtcaaagcttaataattttgatggacaagtgaaggagcctgagttgacagtgaaacaatatgaaccattaat 637  Q
    | |||||||||||||| |||||||| |||||||||||  | || |||||||||||   ||||||| ||||||||| ||  |||||||||||||| |||||    
T  39414806 agtttgaaggacaagttaaggatcctgagtcaaagctggaaaaatttgatggacaccggaaggagtctgagttgagagaaaaacaatatgaaccgttaat 39414707  T
Q  638 gaactattttgatgaggaaacagaatcgggtaagtgttcttat 680  Q
     ||  |||||||||||| ||   |||||||||| |||||||||    
T  39414706 aaaagattttgatgagggaagcaaatcgggtaaatgttcttat 39414664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 3 - 189
Target Start/End: Complemental strand, 39390641 - 39390455
Alignment:
Q  3 aaagagaagcaacttgatggtcgaggggaagaacatgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttttg 102  Q
    ||||||||||||| |||  | |||| | | || |||||||||||| |||||||||| ||||||||  ||||||| || |||||||||| |||   |||||    
T  39390641 aaagagaagcaacatgaaagccgagtgaaggagcatgaatcaaaagagagagaatttgaaggccaaatgaaggaactggaatctaaaaggaagcattttg 39390542  T
Q  103 aaagtcaagtggaggagctcaaatcaaaagagagacaagtgaaaggacaagttaaggaacttgagtgtaaagagaagaaaattgatg 189  Q
    |||| |||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| |||||||||| || ||||||    
T  39390541 aaagccaagtggaggagctcaaaacagaagagaggcaattgaaaggacaagttaaggaacttgagtctaaagagaagcaatttgatg 39390455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 156 - 331
Target Start/End: Complemental strand, 39422217 - 39422042
Alignment:
Q  156 aaggaacttgagtgtaaagagaagaaaattgatggccgagcaaaggagattgaatcaaaagaggatgaatttgaaggccgggtgaaggagttggaatcag 255  Q
    ||||| ||||||| |||||||||| || |||||||||| |   ||| | ||||||||||||||||||||||| ||||||| ||| || || |||||||||    
T  39422217 aaggaccttgagtctaaagagaagcaacttgatggccgggatgaggggtttgaatcaaaagaggatgaatttcaaggccgagtggagaagctggaatcag 39422118  T
Q  256 aaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaagaaaagcaatttgaaggacaagtgaaggagtt 331  Q
    ||||||||||||| || ||| | |||||||| |||||||||| ||||||| |||| || |||||| ||||||||||    
T  39422117 aaaagaagcattttgaaagccgactgaaggatctcgaatcaatagaaaagaaattcgatggacaaatgaaggagtt 39422042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 399 - 609
Target Start/End: Original strand, 39161722 - 39161932
Alignment:
Q  399 tcaaaaaagaagcaatttgaaagccagtttgaggacttaaaattaaaagagaagcaatttgaagaacagcggaaagaattcgaggctgaagagaataagt 498  Q
    |||||||| ||||| |||||||| ||  |||||||||| |||| |||| |||| |||||||||| || | |||| ||| | ||| |  ||||| |||||     
T  39161722 tcaaaaaataagcattttgaaagacaagttgaggacttcaaatcaaaacagaaacaatttgaaggacggtggaatgaactggagacgaaagagtataagc 39161821  T
Q  499 tcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattttgatggacaagtgaa 598  Q
    ||||||||   | ||| |||||||| |||||||| |||||||||||||||||||||||||||||  |||||||| | ||||| |||||||||||| | ||    
T  39161822 tcaaagtaaatgagaaggagctcaacttaaaagaaaagcaatttgaaggacaagtcaaggatcctaagtcaaagatgaataaatttgatggacaactaaa 39161921  T
Q  599 ggagcctgagt 609  Q
    |||||||||||    
T  39161922 ggagcctgagt 39161932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 399 - 609
Target Start/End: Complemental strand, 39207472 - 39207262
Alignment:
Q  399 tcaaaaaagaagcaatttgaaagccagtttgaggacttaaaattaaaagagaagcaatttgaagaacagcggaaagaattcgaggctgaagagaataagt 498  Q
    |||||||| ||||| |||||||| ||  |||||||||| |||| |||| |||| |||||||||| || | |||| ||| | ||| |  ||||| |||||     
T  39207472 tcaaaaaataagcattttgaaagacaagttgaggacttcaaatcaaaacagaaacaatttgaaggacggtggaatgaactggagacgaaagagtataagc 39207373  T
Q  499 tcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattttgatggacaagtgaa 598  Q
    ||||||||   | ||| |||||||| |||||||| |||||||||||||||||||||||||||||  |||||||| | ||||| |||||||||||| | ||    
T  39207372 tcaaagtaaatgagaaggagctcaacttaaaagaaaagcaatttgaaggacaagtcaaggatcctaagtcaaagatgaataaatttgatggacaactaaa 39207273  T
Q  599 ggagcctgagt 609  Q
    |||||||||||    
T  39207272 ggagcctgagt 39207262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 403 - 680
Target Start/End: Complemental strand, 39398008 - 39397731
Alignment:
Q  403 aaaagaagcaatttgaaagccagtttgaggacttaaaattaaaagagaagcaatttgaagaacagcggaaagaattcgaggctgaagagaataagttcaa 502  Q
    |||| ||||| |||||||||||  ||||||| || |||| |||||| |||||| ||||||||| | ||||| || | ||| |  |||||||| |||||||    
T  39398008 aaaataagcactttgaaagccaagttgaggatttcaaatcaaaagataagcaaattgaagaacggtggaaaaaacttgagtcaaaagagaatcagttcaa 39397909  T
Q  503 agtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattttgatggacaagtgaaggag 602  Q
    ||||   ||| | |||||  |||||||||| |||||  ||| ||| | ||||||||| |  ||||||| |||  |||| |||||||||||| ||||||||    
T  39397908 agtaaaggtgcaggagcttgagttaaaagagaagcaggttgcaggtcgagtcaaggaacttgagtcaaggctggataaatttgatggacaactgaaggag 39397809  T
Q  603 cctgagttgacagtgaaacaatatgaaccattaatgaactattttgatgaggaaacagaatcgggtaagtgttcttat 680  Q
    ||||||||||||| ||||||||||||| | ||||  || ||| |  ||||||||| ||||||||||||  ||||||||    
T  39397808 cctgagttgacagggaaacaatatgaagcgttaaaaaaatatatcaatgaggaaaaagaatcgggtaaaggttcttat 39397731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 39458607 - 39458760
Alignment:
Q  42 tcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttttgaaagtcaagtggaggagctcaaatcaaaagagagacaag 141  Q
    |||||||||||||| || ||||  || ||||||||||| |||||| |||||||  |||||||||| |||||||||||| ||  |||| || |||| |||     
T  39458607 tcaaaaaagagagattttgaagagcaggtgaaggagctggaatctgaaaagaagagttttgaaagccaagtggaggagttcgtatcacaacagaggcaat 39458706  T
Q  142 tgaaaggacaagttaaggaacttgagtgtaaagagaagaaaattgatggccgag 195  Q
    ||||||||||||||||||||||||||| |||||||||| || ||||||||||||    
T  39458707 tgaaaggacaagttaaggaacttgagtctaaagagaagcaacttgatggccgag 39458760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 487 - 698
Target Start/End: Complemental strand, 39381586 - 39381375
Alignment:
Q  487 aagagaataagttcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattttga 586  Q
    |||||||| |||||||||||    |||| ||||||||||||||||| ||||| |||||| |||||| ||||||||| || |||||||| ||||| || ||    
T  39381586 aagagaatgagttcaaagtaaagatgaatgagctcaagttaaaagagaagcagtttgaaagacaagacaaggatcctgattcaaagctaaataaattgga 39381487  T
Q  587 tggacaagtgaaggagcctgagttgacagtgaaacaatatgaaccattaatgaactattttgatgaggaaacagaatcgggtaagtgttcttattcattt 686  Q
    ||||||| |||| |||||| | |||||||  |||||||||||| ||||||  || ||| |||| |||||   |||||| ||||| ||||||||||||| |    
T  39381486 tggacaaatgaaagagcctaaattgacaggtaaacaatatgaagcattaagaaaatatattgacgaggagcaagaatctggtaaatgttcttattcatat 39381387  T
Q  687 agcttattgaaa 698  Q
    || ||| |||||    
T  39381386 agtttactgaaa 39381375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 218
Target Start/End: Complemental strand, 39390431 - 39390216
Alignment:
Q  3 aaagagaagcaacttgatggtcgaggggaagaacatgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttttg 102  Q
    ||||||||||||| |||  | |||| | | || |||| ||||||| |||||||||| ||||||||  ||||||| || |||||||||| |||   |||||    
T  39390431 aaagagaagcaacatgaaagccgagtgaaggagcatggatcaaaagagagagaatttgaaggccaaatgaaggaactggaatctaaaaggaagcattttg 39390332  T
Q  103 aaagtcaagtggaggagctcaaatcaaaagagagacaagtgaaaggacaagttaaggaacttgagtgtaaagagaagaaaattgatggccgagcaaagga 202  Q
    |||| |||||||||||||||||| |||||| ||  ||| |||||||| |||||||||||||||||| || ||||| | || ||||| |||| |  |||||    
T  39390331 aaagccaagtggaggagctcaaaacaaaagtgaagcaattgaaaggagaagttaaggaacttgagtctagagagatgcaatttgattgccgtgtgaagga 39390232  T
Q  203 gattgaatcaaaagag 218  Q
      |||| |||||||||    
T  39390231 ttttgagtcaaaagag 39390216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 36 - 227
Target Start/End: Original strand, 39603211 - 39603402
Alignment:
Q  36 catgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttttgaaagtcaagtggaggagctcaaatcaaaagaga 135  Q
    |||||||||||| |||||||||| |||   || | ||||||||| ||||||||||||||   ||||||||| |||||||||||| ||| |||||||  |     
T  39603211 catgaatcaaaagagagagaatttgaaattcaagcgaaggagctggaatctaaaaagaagcattttgaaagccaagtggaggagttcacatcaaaactgt 39603310  T
Q  136 gacaagtgaaaggacaagttaaggaacttgagtgtaaagagaagaaaattgatggccgagcaaaggagattgaatcaaaagaggatgaattt 227  Q
    | ||| |||||||||||||||||||||||||||  ||||||||| || ||||| || | |  || | | ||||||||||||||| |||||||    
T  39603311 ggcaattgaaaggacaagttaaggaacttgagtacaaagagaagcaatttgatagcagggtgaaagcgtttgaatcaaaagaggttgaattt 39603402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 629
Target Start/End: Original strand, 39468204 - 39468449
Alignment:
Q  384 gttaagcagctcaattcaaaaaagaagcaatttgaaagccagtttgaggacttaaaattaaaagagaagcaatttgaagaacagcggaaagaattcgagg 483  Q
    |||||| ||||| | |||||||||||  | ||||| || ||  ||||||| || |||| |||||| ||||||||||| |||| | | ||||||||  ||     
T  39468204 gttaaggagctcgaatcaaaaaagaaatattttgacagtcaagttgaggatttcaaatcaaaagataagcaatttgatgaacggtgtaaagaattgaagt 39468303  T
Q  484 ctgaagagaataagttcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattt 583  Q
    |  ||||||||  ||||||||||   ||||| ||| ||||||||||||| |||||  ||||||||||||||||||| |   ||||||||   | ||| ||    
T  39468304 caaaagagaatcggttcaaagtaaaggtgaaggagttcaagttaaaagagaagcagattgaaggacaagtcaaggaacttcagtcaaagtcgattaagtt 39468403  T
Q  584 tgatggacaagtgaaggagcctgagttgacagtgaaacaatatgaa 629  Q
    ||| ||||||| ||||||||||||||||| || |||||||||||||    
T  39468404 tgacggacaagcgaaggagcctgagttgaaagggaaacaatatgaa 39468449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 36 - 245
Target Start/End: Original strand, 39603001 - 39603210
Alignment:
Q  36 catgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttttgaaagtcaagtggaggagctcaaatcaaaagaga 135  Q
    |||||||||||| | ||||| || |||||||| |||| |||||| ||||||||||||||   ||||||||| || ||||||||||||| ||||||   |     
T  39603001 catgaatcaaaagaaagagagtttgaaggccaagtgacggagctggaatctaaaaagaagcattttgaaagccatgtggaggagctcacatcaaatctgt 39603100  T
Q  136 gacaagtgaaaggacaagttaaggaacttgagtgtaaagagaagaaaattgatggccgagcaaaggagattgaatcaaaagaggatgaatttgaaggccg 235  Q
    | ||| |||||||||| |||||||||||||| |  ||||||||  |  ||||| |||| |  || |   |||||||||||||||||||||||||||||||    
T  39603101 ggcaattgaaaggacaggttaaggaacttgaatccaaagagaaacagtttgatagccgggtgaaagcatttgaatcaaaagaggatgaatttgaaggccg 39603200  T
Q  236 ggtgaaggag 245  Q
     | |||||||    
T  39603201 agcgaaggag 39603210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 171 - 331
Target Start/End: Complemental strand, 39487904 - 39487744
Alignment:
Q  171 aaagagaagaaaattgatggccgagcaaaggagattgaatcaaaagaggatgaatttgaaggccgggtgaaggagttggaatcagaaaagaagcatttcg 270  Q
    ||||||||| || |||||||||||   |||||| |  | | ||||||||||||||||||||||||||||||||||   ||||| |||||||||||||  |    
T  39487904 aaagagaagcaacttgatggccgaatgaaggagttaaagttaaaagaggatgaatttgaaggccgggtgaaggagcccgaatctgaaaagaagcattctg 39487805  T
Q  271 agagcaggctgaaggagctcgaatcaaaagaaaagcaatttgaaggacaagtgaaggagtt 331  Q
    ||||| | | ||||||||||||| || |||||||||||  ||||| |||| ||||||||||    
T  39487804 agagccgacagaaggagctcgaagcacaagaaaagcaacatgaagaacaaatgaaggagtt 39487744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 487 - 609
Target Start/End: Complemental strand, 39389212 - 39389090
Alignment:
Q  487 aagagaataagttcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattttga 586  Q
    ||||| ||||||||||||||   ||||| |||||||| |||||||| ||||| |||||||| |||||||| ||||| ||||||||||| ||||| |||||    
T  39389212 aagagtataagttcaaagtaaaggtgaaggagctcaacttaaaagaaaagcagtttgaagggcaagtcaacgatcctgagtcaaagctgaataaatttga 39389113  T
Q  587 tggacaagtgaaggagcctgagt 609  Q
    ||||||| | |||||||| ||||    
T  39389112 tggacaaataaaggagcccgagt 39389090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 39192649 - 39192552
Alignment:
Q  38 tgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttttgaaagtcaagtggaggagctcaaatcaaaagaga 135  Q
    |||||||||| ||||||||||||||||||| |||||||| || ||||||| ||||||   |||| ||||||||||||||||| |||||||||||||||    
T  39192649 tgaatcaaaagagagagaattcgaaggccaagtgaaggaacttgaatctagaaagaagcattttaaaagtcaagtggaggagttcaaatcaaaagaga 39192552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 39198329 - 39198232
Alignment:
Q  38 tgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttttgaaagtcaagtggaggagctcaaatcaaaagaga 135  Q
    |||||||||| ||||||||||||||||||| |||||||| || ||||||| ||||||   |||| ||||||||||||||||| |||||||||||||||    
T  39198329 tgaatcaaaagagagagaattcgaaggccaagtgaaggaacttgaatctagaaagaagcattttaaaagtcaagtggaggagttcaaatcaaaagaga 39198232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 39451761 - 39451861
Alignment:
Q  36 catgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttttgaaagtcaagtggaggagctcaaatcaaaagaga 135  Q
    ||||||||||||  ||||||||| |||||| | |||||||| || ||||||||||||||   ||||||||| ||||||||||||||||||||||||||||    
T  39451761 catgaatcaaaagtgagagaatttgaaggcaaagtgaaggatctggaatctaaaaagaagcattttgaaagccaagtggaggagctcaaatcaaaagaga 39451860  T
Q  136 g 136  Q
    |    
T  39451861 g 39451861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 333 - 419
Target Start/End: Complemental strand, 39414969 - 39414883
Alignment:
Q  333 aaaggtcaagggaaggagtttgaatcaaagaaggaggaattcaaaggtcaggttaagcagctcaattcaaaaaagaagcaatttgaa 419  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||||||| |||||| | ||||| |||||| ||||||||||||||    
T  39414969 aaaggtcaagtgaaggagtttgaatcaaaggaggaggagttcaaaggtcaagttaaggaactcaaatcaaaagagaagcaatttgaa 39414883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 399 - 562
Target Start/End: Original strand, 39222765 - 39222928
Alignment:
Q  399 tcaaaaaagaagcaatttgaaagccagtttgaggacttaaaattaaaagagaagcaatttgaagaacagcggaaagaattcgaggctgaagagaataagt 498  Q
    |||||||||||||| || ||||||||  | ||||| || |||| |||||||||||||||||||||||   ||||  || | ||| | |||||||||||||    
T  39222765 tcaaaaaagaagcatttcgaaagccaagtcgaggagtttaaatcaaaagagaagcaatttgaagaacgatggaataaacttgagtcagaagagaataagt 39222864  T
Q  499 tcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatcc 562  Q
    |||||| |   ||||| |||||||| || ||||| |||   |||||||||||||||||||||||    
T  39222865 tcaaagcaaaggtgaaggagctcaacttcaaagaaaagtggtttgaaggacaagtcaaggatcc 39222928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 221 - 331
Target Start/End: Original strand, 44614579 - 44614689
Alignment:
Q  221 tgaatttgaaggccgggtgaaggagttggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaagaaaagcaatttgaaggacaa 320  Q
    |||||||||||||| |||| |||| || ||||||||||||||||||||||||||| | |  |||||  | ||||||||||||||| |||||||| ||  |    
T  44614579 tgaatttgaaggcctggtggaggactttgaatcagaaaagaagcatttcgagagccgacaaaaggaatttgaatcaaaagaaaaggaatttgaaagaaga 44614678  T
Q  321 gtgaaggagtt 331  Q
    |||||||||||    
T  44614679 gtgaaggagtt 44614689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 344 - 461
Target Start/End: Original strand, 39137665 - 39137782
Alignment:
Q  344 gaaggagtttgaatcaaagaaggaggaattcaaaggtcaggttaagcagctcaattcaaaaaagaagcaatttgaaagccagtttgaggacttaaaatta 443  Q
    |||||| |||||||||||| | ||||| ||| ||| ||| |||||| ||||||| ||||||||||||||||| |||| |||  ||||||| || |||| |    
T  39137665 gaaggattttgaatcaaaggatgaggagttcgaagatcaagttaaggagctcaaatcaaaaaagaagcaattcgaaaaccaagttgaggatttcaaatca 39137764  T
Q  444 aaagagaagcaatttgaa 461  Q
    |||||||||||| |||||    
T  39137765 aaagagaagcaacttgaa 39137782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 39415209 - 39415097
Alignment:
Q  198 aaggagattgaatcaaaagaggatgaatttgaaggccgggtgaaggagttggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaa 297  Q
    |||||| |||| ||||||||| |  ||  |||||| || ||||||||| ||||||||||||||||||||||||| |||   ||||||||||| |||||||    
T  39415209 aaggagcttgagtcaaaagagaagcaacatgaaggtcgagtgaaggagctggaatcagaaaagaagcatttcgaaagccaactgaaggagcttgaatcaa 39415110  T
Q  298 aagaaaagcaatt 310  Q
    ||||||| |||||    
T  39415109 aagaaaatcaatt 39415097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 487 - 562
Target Start/End: Complemental strand, 39192515 - 39192440
Alignment:
Q  487 aagagaataagttcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatcc 562  Q
    |||||||||||||||||| |   ||||| |||||||| |||||||| ||||| |||||||||| ||||||||||||    
T  39192515 aagagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagcagtttgaaggactagtcaaggatcc 39192440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 487 - 562
Target Start/End: Complemental strand, 39198195 - 39198120
Alignment:
Q  487 aagagaataagttcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatcc 562  Q
    |||||||||||||||||| |   ||||| |||||||| |||||||| ||||| |||||||||| ||||||||||||    
T  39198195 aagagaataagttcaaagcaaaggtgaaggagctcaacttaaaagaaaagcagtttgaaggactagtcaaggatcc 39198120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 541 - 628
Target Start/End: Original strand, 44624027 - 44624114
Alignment:
Q  541 ttgaaggacaagtcaaggatccagagtcaaagcttaataattttgatggacaagtgaaggagcctgagttgacagtgaaacaatatga 628  Q
    |||||| |||| |||||||||   |||||||||| |||||||||| |||||||   ||||||| ||||||||||| ||||||| ||||    
T  44624027 ttgaagtacaaatcaaggatcttaagtcaaagctgaataattttggtggacaaccaaaggagcttgagttgacagagaaacaacatga 44624114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 39415797 - 39415739
Alignment:
Q  36 catgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaa 94  Q
    |||| ||||||| |||||||||| |||||||| |||||||||||  |||||||||||||    
T  39415797 catgcatcaaaagagagagaatttgaaggccaggtgaaggagctgaaatctaaaaagaa 39415739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 329
Target Start/End: Original strand, 39222238 - 39222359
Alignment:
Q  208 aatcaaaagaggatgaatttgaaggccgggtgaaggagttggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaagaaaagca 307  Q
    |||||||||||   ||||||||||||| || |||| || |||||||  ||| |||||||||||| |||    |||||||| | || || ||||| |||||    
T  39222238 aatcaaaagagagggaatttgaaggccaggcgaagcagctggaatctaaaaggaagcatttcgaaagccaaatgaaggagtttgagtctaaagagaagca 39222337  T
Q  308 atttgaaggacaagtgaaggag 329  Q
    | ||||||| ||||||||||||    
T  39222338 acttgaaggccaagtgaaggag 39222359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 39468207 - 39468268
Alignment:
Q  72 aaggagctcgaatctaaaaagaattgttttgaaagtcaagtggaggagctcaaatcaaaaga 133  Q
    |||||||||||||| |||||||| | |||||| |||||||| |||||  |||||||||||||    
T  39468207 aaggagctcgaatcaaaaaagaaatattttgacagtcaagttgaggatttcaaatcaaaaga 39468268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 357 - 425
Target Start/End: Original strand, 2361517 - 2361585
Alignment:
Q  357 tcaaagaaggaggaattcaaaggtcaggttaagcagctcaattcaaaaaagaagcaatttgaaagccag 425  Q
    |||||| ||||||||||| || | ||||| ||| ||||  | |||||||||||||||||||||||||||    
T  2361517 tcaaagcaggaggaattcgaaaggcaggtgaaggagcttgaatcaaaaaagaagcaatttgaaagccag 2361585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 355 - 419
Target Start/End: Complemental strand, 39381676 - 39381612
Alignment:
Q  355 aatcaaagaaggaggaattcaaaggtcaggttaagcagctcaattcaaaaaagaagcaatttgaa 419  Q
    ||||||||||||||||| |||||||||| |||||| || || | ||||| |||||| ||||||||    
T  39381676 aatcaaagaaggaggaactcaaaggtcaagttaaggagttcgagtcaaagaagaagaaatttgaa 39381612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 330
Target Start/End: Complemental strand, 39415677 - 39415545
Alignment:
Q  198 aaggagattgaatcaaaagaggatgaatttgaaggccgggtgaaggagttggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaa 297  Q
    |||||| || |||||||||||   |||||||||||||   |||||||  ||| |||| || ||||||||||| | || ||  |||||||||| ||  |||    
T  39415677 aaggagtttaaatcaaaagagagggaatttgaaggccaaatgaaggaactggcatcaaaacagaagcatttcaaaaggagaatgaaggagcttgaggcaa 39415578  T
Q  298 aagaaaagcaatttgaaggacaagtgaaggagt 330  Q
    |||| ||||||  |||||| |||||||||||||    
T  39415577 aagagaagcaacatgaaggtcaagtgaaggagt 39415545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 39161835 - 39161882
Alignment:
Q  281 gaaggagctcgaatcaaaagaaaagcaatttgaaggacaagtgaagga 328  Q
    |||||||||| | | ||||||||||||||||||||||||||| |||||    
T  39161835 gaaggagctcaacttaaaagaaaagcaatttgaaggacaagtcaagga 39161882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 39207359 - 39207312
Alignment:
Q  281 gaaggagctcgaatcaaaagaaaagcaatttgaaggacaagtgaagga 328  Q
    |||||||||| | | ||||||||||||||||||||||||||| |||||    
T  39207359 gaaggagctcaacttaaaagaaaagcaatttgaaggacaagtcaagga 39207312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 39422008 - 39421965
Alignment:
Q  344 gaaggagtttgaatcaaagaaggaggaattcaaaggtcaggtta 387  Q
    |||||||||| |||||||| ||||| ||||||||||||||||||    
T  39422008 gaaggagtttaaatcaaaggaggagcaattcaaaggtcaggtta 39421965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 39467934 - 39467988
Alignment:
Q  198 aaggagattgaatcaaaagaggatgaatttgaaggccgggtgaaggagttggaat 252  Q
    |||||| ||||||||||||||||  |||||||||||| | |||||||| ||||||    
T  39467934 aaggagtttgaatcaaaagaggagaaatttgaaggccagatgaaggagctggaat 39467988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 263
Target Start/End: Original strand, 39221311 - 39221432
Alignment:
Q  142 tgaaaggacaagttaaggaacttgagtgtaaagagaagaaaattgatggccgagcaaaggagattgaatcaaaagaggatgaatttgaaggccgggtgaa 241  Q
    |||||||||| ||| |||||||||| |  ||||||||| || ||||||||| ||  |||||| | |||||  || || || | |||||| | | ||||||    
T  39221311 tgaaaggacaggttgaggaacttgactccaaagagaagcaacttgatggccaagtgaaggagctggaatctcaaaagaatcactttgaaagtcaggtgaa 39221410  T
Q  242 ggagttggaatcagaaaagaag 263  Q
    |||||| |||||| ||||||||    
T  39221411 ggagtttgaatcaaaaaagaag 39221432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 299
Target Start/End: Complemental strand, 39389766 - 39389673
Alignment:
Q  206 tgaatcaaaagaggatgaatttgaaggccgggtgaaggagttggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaa 299  Q
    ||||||||| ||| | ||||||||||| |  | ||||||| |||||||  |||||||||||||||| |||| | ||  ||||||| ||||||||    
T  39389766 tgaatcaaaggagaaggaatttgaaggtcaagcgaaggagctggaatctaaaaagaagcatttcgaaagcatgatggtggagctcaaatcaaaa 39389673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 5e-49; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 36 - 331
Target Start/End: Original strand, 19807286 - 19807581
Alignment:
Q  36 catgaatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttttgaaagtcaagtggaggagctcaaatcaaaagaga 135  Q
    |||| ||||||| |||||||||| ||| ||||  ||| |||||   |||||||||||||    |||||||| |||||||||||||| |||||||||||||    
T  19807286 catgcatcaaaagagagagaatttgaaagccaaatgatggagcagcaatctaaaaagaagctgtttgaaagccaagtggaggagcttaaatcaaaagaga 19807385  T
Q  136 gacaagtgaaaggacaagttaaggaacttgagtgtaaagagaagaaaattgatggccgagcaaaggagattgaatcaaaagaggatgaatttgaaggccg 235  Q
    ||||     ||||||||||||| |||||||||| ||||| |||| || |||||||| ||   |||||| |  | | ||||||||||||||||||||||||    
T  19807386 gacatactcaaggacaagttaaagaacttgagtctaaagcgaagcaacttgatggctgactgaaggagttaaagttaaaagaggatgaatttgaaggccg 19807485  T
Q  236 ggtgaaggagttggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaagaaaagcaatttgaaggacaagtgaaggagtt 331  Q
    || ||||||| | ||||| ||||||||||||||||||||| | | ||||  ||||||| || |||||||||||| ||||| |||| ||||||||||    
T  19807486 ggcgaaggagctcgaatctgaaaagaagcatttcgagagccgacagaagcggctcgaaacacaagaaaagcaatatgaagaacaaatgaaggagtt 19807581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 394 - 693
Target Start/End: Original strand, 19807707 - 19807994
Alignment:
Q  394 tcaattcaaaaaagaagcaatttgaaagccagtttgaggacttaaaattaaaagagaagcaatttgaagaacagcggaaagaattcgaggctgaagagaa 493  Q
    |||| |||||| |||||||| ||||||||||  | ||||| |  |||| ||||||||| ||| ||||||||  | |||||||| ||||| |  |||||||    
T  19807707 tcaaatcaaaagagaagcaacttgaaagccaagtcgaggaatacaaatcaaaagagaatcaaattgaagaaaggtggaaagaactcgagtcaaaagagaa 19807806  T
Q  494 taagttcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattttgatggacaa 593  Q
    ||||||||||||||| || ||||||||||||||||||||            |||| || |||||||||| |  ||||||||  |||| ||||||||||||    
T  19807807 taagttcaaagtactggtcaaagagctcaagttaaaaga------------aggaaaaatcaaggatcctggttcaaagctggataaatttgatggacaa 19807894  T
Q  594 gtgaaggagcctgagttgacagtgaaacaatatgaaccattaatgaactattttgatgaggaaacagaatcgggtaagtgttcttattcatttagcttat 693  Q
     |||||||| |||||||||||| |||||||| |||| ||||||| ||||||||||||||||||| || |||||||||  |||||||||||| ||| ||||    
T  19807895 ttgaaggagtctgagttgacagagaaacaatttgaatcattaataaactattttgatgaggaaaaagcatcgggtaaaagttcttattcatctagtttat 19807994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 344 - 461
Target Start/End: Original strand, 19807615 - 19807732
Alignment:
Q  344 gaaggagtttgaatcaaagaaggaggaattcaaaggtcaggttaagcagctcaattcaaaaaagaagcaatttgaaagccagtttgaggacttaaaatta 443  Q
    |||||| |||||||||||| | ||||  ||| ||||||  |||||| || |||| | ||||||||||||||| |||| |||  |||||||||| |||| |    
T  19807615 gaaggattttgaatcaaaggatgaggggttcgaaggtcgagttaaggagttcaaataaaaaaagaagcaattcgaaaaccaagttgaggacttcaaatca 19807714  T
Q  444 aaagagaagcaatttgaa 461  Q
    |||||||||||| |||||    
T  19807715 aaagagaagcaacttgaa 19807732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 7e-45; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 40 - 332
Target Start/End: Original strand, 17059267 - 17059559
Alignment:
Q  40 aatcaaaaaagagagaattcgaaggccatgtgaaggagctcgaatctaaaaagaattgttttgaaagtcaagtggaggagctcaaatcaaaagagagaca 139  Q
    |||||||| |||| ||||| |||||||  ||||||||||| ||||||||||| ||   |||||| |  ||||||||||||||||||||||||||||| ||    
T  17059267 aatcaaaagagagtgaatttgaaggcctagtgaaggagctggaatctaaaaaaaaggattttgatatccaagtggaggagctcaaatcaaaagagaggca 17059366  T
Q  140 agtgaaaggacaagttaaggaacttgagtgtaaagagaagaaaattgatggccgagcaaaggagattgaatcaaaagaggatgaatttgaaggccgggtg 239  Q
    | || ||||| ||||| |||| ||||||| || | |||| | | |||||||||||  |||||| |||||||||||| ||| ||||||||||||||| ||     
T  17059367 attggaaggagaagttcaggatcttgagtctagaaagaatacacttgatggccgacaaaaggaaattgaatcaaaaaagggtgaatttgaaggccgagtc 17059466  T
Q  240 aaggagttggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaagaaaagcaatttgaaggacaagtgaaggagttt 332  Q
     |||| ||   ||||||||| | | |||| |||| | | ||||||||||||||| |||||||||| || || |||| | ||||||||||||||    
T  17059467 gaggactttacatcagaaaaaatggattttgagatccgactgaaggagctcgaaacaaaagaaaaacatttcgaagaaaaagtgaaggagttt 17059559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 399 - 699
Target Start/End: Original strand, 16113179 - 16113479
Alignment:
Q  399 tcaaaaaagaagcaatttgaaagccagtttgaggacttaaaattaaaagagaagcaatttgaagaacagcggaaagaattcgaggctgaagagaataagt 498  Q
    |||||||| ||||| || ||||||||  ||||| | || |||| ||| || |||||||||||||||| | |||||||| ||||  |  |||||||| |||    
T  16113179 tcaaaaaataagcatttggaaagccaagttgagtatttcaaatcaaacgataagcaatttgaagaacggtggaaagaactcgaatcaaaagagaatcagt 16113278  T
Q  499 tcaaagtactagtgaaagagctcaagttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattttgatggacaagtgaa 598  Q
    ||||||||   | ||| ||||||||||||||||| |||||  |||||| |||||||||||| |  ||||||||||| ||  | ||||  |||||| ||||    
T  16113279 tcaaagtaaaggagaaggagctcaagttaaaagagaagcagattgaagtacaagtcaaggagcttgagtcaaagctgaacgaatttggcggacaactgaa 16113378  T
Q  599 ggagcctgagttgacagtgaaacaatatgaaccattaatgaactattttgatgaggaaacagaatcgggtaagtgttcttattcatttagcttattgaaa 698  Q
    |||||||||||| |||| |||||| | |||| |||| |  ||  || |||| ||||||| ||||||||||||||||||| |||||| ||| |||||||||    
T  16113379 ggagcctgagttaacagggaaacactctgaagcatttaaaaaacatattgacgaggaaaaagaatcgggtaagtgttctcattcatctagtttattgaaa 16113478  T
Q  699 a 699  Q
    |    
T  16113479 a 16113479  T

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Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 523 - 625
Target Start/End: Original strand, 45342054 - 45342156
Alignment:
Q  523 agttaaaagacaagcaatttgaaggacaagtcaaggatccagagtcaaagcttaataattttgatggacaagtgaaggagcctgagttgacagtgaaaca 622  Q
    |||||||||| || || |||||||  ||| ||||||| |  ||||||||||| |||||||| ||||||||| | ||||||| ||||||||||  ||||||    
T  45342054 agttaaaagagaatcagtttgaagtgcaaatcaaggaccttgagtcaaagctgaataatttggatggacaaataaaggagcttgagttgacaaagaaaca 45342153  T
Q  623 ata 625  Q
    |||    
T  45342154 ata 45342156  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 315
Target Start/End: Original strand, 40347343 - 40347508
Alignment:
Q  150 caagttaaggaacttgagtgtaaagagaagaaaattgatggccgagcaaaggagattgaatcaaaagaggatgaatttgaaggccgggtgaaggagttgg 249  Q
    ||||||||| ||||||| | | || |||| | | ||||||| |||| ||| ||| ||||||| ||| ||| |||||||||| | | | ||||||| || |    
T  40347343 caagttaagaaacttgaatctgaaaagaatatacttgatggtcgagtaaatgagtttgaatctaaaaagggtgaatttgaatggctgatgaaggactttg 40347442  T
Q  250 aatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaagaaaagcaatttgaag 315  Q
    ||||||||||   | ||||||||||| | |  |||||| | ||||||||||||||| | |||||||    
T  40347443 aatcagaaaaattgaatttcgagagccgacaaaaggagtttgaatcaaaagaaaaggagtttgaag 40347508  T

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Target: chr3 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 51574930 - 51575024
Alignment:
Q  235 gggtgaaggagttggaatcagaaaagaagcatttcgagagcaggctgaaggagctcgaatcaaaagaaaagcaatttgaaggacaagtgaaggag 329  Q
    |||| |||||| | |||||||||||||||||||| || |||    ||||||| ||| |||||||||| || |||||||||||||  |||||||||    
T  51574930 gggtaaaggaggttgaatcagaaaagaagcattttgaaagccaagtgaaggaactcaaatcaaaagagaaacaatttgaaggacgggtgaaggag 51575024  T

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Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 51574562 - 51574618
Alignment:
Q  198 aaggagattgaatcaaaagaggatgaatttgaaggccgggtgaaggagttggaatca 254  Q
    |||||||||  |||||||||||| | ||||||||| |||||||||||||| ||||||    
T  51574562 aaggagattacatcaaaagaggaggcatttgaaggtcgggtgaaggagtttgaatca 51574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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