View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4381_low_8 (Length: 629)
Name: NF4381_low_8
Description: NF4381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4381_low_8 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 611; Significance: 0; HSPs: 31)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 611; E-Value: 0
Query Start/End: Original strand, 1 - 619
Target Start/End: Complemental strand, 8932565 - 8931947
Alignment:
| Q |
1 |
ctataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8932565 |
ctataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctc |
8932466 |
T |
|
| Q |
101 |
tcttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8932465 |
tcttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttg |
8932366 |
T |
|
| Q |
201 |
catcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8932365 |
catcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttg |
8932266 |
T |
|
| Q |
301 |
caaaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaa |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8932265 |
caaaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaa |
8932166 |
T |
|
| Q |
401 |
agtttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaa |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8932165 |
agtttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaa |
8932066 |
T |
|
| Q |
501 |
attttctttccctattggatttacaatgaattgattgaagaaagggagatagatatatctggagaagctaccgatgaagaaaagaaaaatgtgaagaaga |
600 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
8932065 |
attttctttccctattggatttacaatgaattgatggaagaaagggagatagatatatctggagaagctaccgatgaggaaaagaaaaatgtgaagaaga |
8931966 |
T |
|
| Q |
601 |
tgttcataattgctctgtg |
619 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
8931965 |
tgttcataattgctctgtg |
8931947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 537; E-Value: 0
Query Start/End: Original strand, 3 - 619
Target Start/End: Complemental strand, 8956485 - 8955869
Alignment:
| Q |
3 |
ataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctc |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8956485 |
ataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgcattgagggatcaaaacgtgctcttgtttatgatttcatgcccaatggctctc |
8956386 |
T |
|
| Q |
103 |
ttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgca |
202 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8956385 |
ttgatagatatatttcctctagggaagatcatatttccttaacttataagcaaatgtatgagatatctcttggagttgcacgtggaattgcttatttgca |
8956286 |
T |
|
| Q |
203 |
tcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgca |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| | |||||||||||||| || |||||||||||||||||| |
|
|
| T |
8956285 |
tcaaggttgtgacatgcaaattttacattttgatatcaagcctcataacattcttcttgacaaagacttcatcgccaaggtttcagactttggtcttgca |
8956186 |
T |
|
| Q |
303 |
aaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaag |
402 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
8956185 |
aaactttatcctgttgacaatagcattgtaactttgacggctgcaagaggaacaattggttacatggctccggaattattctacaaaaatattggtaaag |
8956086 |
T |
|
| Q |
403 |
tttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaat |
502 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8956085 |
tttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaat |
8955986 |
T |
|
| Q |
503 |
tttctttccctattggatttacaatgaattgattgaagaaagggagatagatatatctggagaagctaccgatgaagaaaagaaaaatgtgaagaagatg |
602 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
8955985 |
tttctttccctattggatttacaatgaattgattgaagaaagagagatagatatatctggagaagctaccgatgaggaaaagaaaaatgtgaagaagatg |
8955886 |
T |
|
| Q |
603 |
ttcataattgctctgtg |
619 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
8955885 |
ttcataattgctctgtg |
8955869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 512; E-Value: 0
Query Start/End: Original strand, 3 - 614
Target Start/End: Complemental strand, 8921158 - 8920547
Alignment:
| Q |
3 |
ataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctc |
102 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
8921158 |
ataggaaaaatacatcacgccaatgtggtgcgacttgttggattttgtgttgagggatcaaaacgtgctcttgtttatgatttcatgccaaatggctctc |
8921059 |
T |
|
| Q |
103 |
ttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgca |
202 |
Q |
| |
|
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8921058 |
ttgatagatatatttcctctagagaagatcacatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgca |
8920959 |
T |
|
| Q |
203 |
tcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgca |
302 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
8920958 |
tcaaggctgtgacatgcaaattttacattttgacatcaagcctcataacatacttcttgaccatgacttcatcgccaaagtttcagacttcggtcttgca |
8920859 |
T |
|
| Q |
303 |
aaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaag |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
8920858 |
aaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagagttgttctacaaaaatattggtaaag |
8920759 |
T |
|
| Q |
403 |
tttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaat |
502 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
|
|
| T |
8920758 |
tctcctataaggccgatgtatatagctttggaatgctcttgatggaaatagcaaacaggagaagaaatttgaactcaaatgcaaatgattcagaccaaat |
8920659 |
T |
|
| Q |
503 |
tttctttccctattggatttacaatgaattgattgaagaaagggagatagatatatctggagaagctaccgatgaagaaaagaaaaatgtgaagaagatg |
602 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
8920658 |
tttctttccctattggatctacaatgaattgattgaagaaagggagatagaaatattgggagaagctaccaatgaggaaaagaaaaatgtgaagaagatg |
8920559 |
T |
|
| Q |
603 |
ttcataattgct |
614 |
Q |
| |
|
|||||||||||| |
|
|
| T |
8920558 |
ttcataattgct |
8920547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 3 - 619
Target Start/End: Complemental strand, 8942479 - 8941863
Alignment:
| Q |
3 |
ataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctc |
102 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
8942479 |
ataggaagaatacatcacaccaatgtggtgcgacttattggattttgtgttgagggatcaaaaagagctcttgtttatgatttcatgcccaatggctctc |
8942380 |
T |
|
| Q |
103 |
ttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgca |
202 |
Q |
| |
|
|||||| |||||| || ||||||||||| |||||||||||||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
8942379 |
ttgataaatatatatcatctagagaagatcatatttccttaacttataaacaaatatatgagatatctcttgccgttgcacgtggaattgcttatttgca |
8942280 |
T |
|
| Q |
203 |
tcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgca |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || || ||||| |||||||||||| |
|
|
| T |
8942279 |
tcaaggttgtgacatgcaaattttacattttgatatcaagcctcataacatacttcttgaccaggacttcattgcaaaggtttcagattttggtcttgca |
8942180 |
T |
|
| Q |
303 |
aaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaag |
402 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8942179 |
aaactttatcctattgaaaatagcattgtaactatgaccgctgctagaggtacaattggttacatggcaccagaattgttctacaaaaatattggtaaag |
8942080 |
T |
|
| Q |
403 |
tttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaat |
502 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8942079 |
tttcctataaagccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttaaactcaaatgcagatgattcaagccaaat |
8941980 |
T |
|
| Q |
503 |
tttctttccctattggatttacaatgaattgattgaagaaagggagatagatatatctggagaagctaccgatgaagaaaagaaaaatgtgaagaagatg |
602 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||| ||| ||||| ||||| |||||||||||||| ||| |
|
|
| T |
8941979 |
tttctttccctattggatttacaatgaattggttgaagaaagggagatagaaatattgggagaagttacggatgaggaaaaaaaaaatgtgaagaaaatg |
8941880 |
T |
|
| Q |
603 |
ttcataattgctctgtg |
619 |
Q |
| |
|
|||||| ||||| |||| |
|
|
| T |
8941879 |
ttcatagttgctttgtg |
8941863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 3 - 613
Target Start/End: Original strand, 9317938 - 9318545
Alignment:
| Q |
3 |
ataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctc |
102 |
Q |
| |
|
||||||| |||||| || | |||||||| ||||| |||| |||||| |||||| |||||||||||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
9317938 |
ataggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctc |
9318037 |
T |
|
| Q |
103 |
ttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgca |
202 |
Q |
| |
|
|||||| ||| |||||||||| ||| || |||| |||||| ||| ||||||| ||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
9318038 |
ttgataaatacatttcctctaaagatgatgttattgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcgtggaattgcttatttgca |
9318137 |
T |
|
| Q |
203 |
tcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgca |
302 |
Q |
| |
|
| |||| |||||||||||||| || ||||| ||||||||||| |||||||| |||||||| || |||| || ||||||| |||||||||||||| ||| |
|
|
| T |
9318138 |
tgaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaactttattcccaaagtttcagactttggtctggca |
9318237 |
T |
|
| Q |
303 |
aaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaag |
402 |
Q |
| |
|
|| ||||||||| ||||| ||||||||| ||||| ||||| || |||||||||||||| |||||||| || ||||||||||||||||||||||| || |
|
|
| T |
9318238 |
aagctttatccaaatgacattagcattgtcactttaactgcagctagaggaacaattggatacatggctcctgaattgttctacaaaaatattggaggag |
9318337 |
T |
|
| Q |
403 |
tttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaat |
502 |
Q |
| |
|
| ||||| ||||||||||| ||||||||||||||||| || |||||||| |||| | || ||||||||| || || |||| ||| |||||| ||||| |
|
|
| T |
9318338 |
tatcctacaaggccgatgtatatagctttggaatgcttttgatggaaatggcaagtaagaaaagaaatttaaatccacatgccgatcgttcaagtcaaat |
9318437 |
T |
|
| Q |
503 |
tttctttccctattggatttacaatgaattgattgaagaaagggagatagatatatctggagaagctaccgatgaagaaaagaaaaatgtgaagaagatg |
602 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||||||||||| | ||||||||| ||| | ||| ||| | || ||||| || ||||||||||||||| |
|
|
| T |
9318438 |
tttctttcccatttggatttataatcaattgattgaagacaaggagatagaaata---gatgaaattacatacgaggaaaataataatgtgaagaagatg |
9318534 |
T |
|
| Q |
603 |
ttcataattgc |
613 |
Q |
| |
|
||||||||||| |
|
|
| T |
9318535 |
ttcataattgc |
9318545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 3 - 553
Target Start/End: Complemental strand, 9320364 - 9319814
Alignment:
| Q |
3 |
ataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctc |
102 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||||| |||| ||||||||||| |||||| ||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
9320364 |
ataggaagaatacatcacaccaatgtggttcgacttattgggttttgtgttgaaggatcaaagcgtgctcttgtttatgaattcatgtccaatggctctc |
9320265 |
T |
|
| Q |
103 |
ttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgca |
202 |
Q |
| |
|
|||||| |||||||||||||||||| || ||| || ||| |||| || ||||||| ||||||||||||||||| || ||||| || |||||||| || |
|
|
| T |
9320264 |
ttgataaatatatttcctctagagaggatactatctctctaaattatcagaaaatgtatgagatatctcttggagtggctcgtggtatggcttatttaca |
9320165 |
T |
|
| Q |
203 |
tcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgca |
302 |
Q |
| |
|
|||||| ||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| || |||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
9320164 |
tcaaggatgtgacatgcaaattttgcattttgatatcaagccccataacatccttcttgatgagaactttatccccaaagtttcagactttggtcttgct |
9320065 |
T |
|
| Q |
303 |
aaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaag |
402 |
Q |
| |
|
|| |||||||| ||| | ||||||||| ||||| ||||| ||||||||||||||||| || ||||| || ||||||||||||||||||||||| || |
|
|
| T |
9320064 |
aagctttatcctaatgagattagcattgtcactttaactgcagcaagaggaacaattggatatatggctcctgaattgttctacaaaaatattggaggag |
9319965 |
T |
|
| Q |
403 |
tttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaat |
502 |
Q |
| |
|
| ||||| ||||| ||||| |||||||| |||||||| || |||||||| |||| | || |||||| || || || |||| || |||||| ||||| |
|
|
| T |
9319964 |
tatcctacaaggctgatgtatatagcttcggaatgcttttgatggaaatggcaagtaagaaaagaaacttaaatccacatgccgaacgttcaagtcaaat |
9319865 |
T |
|
| Q |
503 |
tttctttccctattggatttacaatgaattgattgaagaaagggagataga |
553 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||| ||| |||||||| ||||| |
|
|
| T |
9319864 |
tttctttcccatttggatttataatcaattggctgatgaaagggaaataga |
9319814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 3 - 553
Target Start/End: Complemental strand, 9350681 - 9350131
Alignment:
| Q |
3 |
ataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctc |
102 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||| |||| ||||||||||| |||||| ||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
9350681 |
ataggaagaatacatcacaccaatgtggtttgacttattgggttttgtgttgaaggatcaaagcgtgctcttgtttatgaattcatgtccaatggctctc |
9350582 |
T |
|
| Q |
103 |
ttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgca |
202 |
Q |
| |
|
|||||| |||||||||||||||||| || ||| || ||| |||| || ||||||| ||||||||| ||||||| || ||||| || |||||||| || |
|
|
| T |
9350581 |
ttgataaatatatttcctctagagaggatactatctctctaagttatcagaaaatgtatgagatatctgttggagtggctcgtggtatggcttatttaca |
9350482 |
T |
|
| Q |
203 |
tcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgca |
302 |
Q |
| |
|
|||||| ||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| || |||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
9350481 |
tcaaggatgtgacatgcaaattttgcattttgatatcaagccccataacatccttcttgatgagaactttatccccaaagtttcagactttggtcttgct |
9350382 |
T |
|
| Q |
303 |
aaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaag |
402 |
Q |
| |
|
|| |||||||| ||| | ||||||||| ||||| ||||| ||||||||||||||||| || ||||| || || |||||||||||||||||||| || |
|
|
| T |
9350381 |
aagctttatcctaatgagattagcattgtcactttaactgcagcaagaggaacaattggatatatggctcctgagttgttctacaaaaatattggaggag |
9350282 |
T |
|
| Q |
403 |
tttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaat |
502 |
Q |
| |
|
| ||||| ||||| ||||| |||||||| |||||||| || |||||||| |||| | || ||||||||| || || |||| || |||||| ||||| |
|
|
| T |
9350281 |
tatcctacaaggctgatgtatatagcttcggaatgcttttgatggaaatcgcaagtaagaaaagaaatttaaatccacatgccgaacgttcaagtcaaat |
9350182 |
T |
|
| Q |
503 |
tttctttccctattggatttacaatgaattgattgaagaaagggagataga |
553 |
Q |
| |
|
|||||||||| ||||||||| ||| ||||| ||| |||||||| ||||| |
|
|
| T |
9350181 |
tttctttcccatttggatttataatcaattggctgatgaaagggaaataga |
9350131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 3 - 610
Target Start/End: Original strand, 9254676 - 9255280
Alignment:
| Q |
3 |
ataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctc |
102 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||| |||| |||||||||||| |||||| ||||||||||||||||| |||||| ||||||| |||| |
|
|
| T |
9254676 |
ataggaagaatacatcacaccaatgtggctcgacttattgggttttgtgttgagggatcaaagcgtgctcttgtttatgaattcatgtccaatggttctc |
9254775 |
T |
|
| Q |
103 |
ttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgca |
202 |
Q |
| |
|
|||||| |||||||||||||||||| || ||| || ||| |||| || ||||||||||||||||||||||||| || | ||| ||||||||||| || |
|
|
| T |
9254776 |
ttgataaatatatttcctctagagaggatactatctctctaagttatcagaaaatgtacgagatatctcttggagtggctcatggtattgcttatttaca |
9254875 |
T |
|
| Q |
203 |
tcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgca |
302 |
Q |
| |
|
|||||| || || ||||||||||| ||||| || |||||||| |||||||| ||||| || || |||| | | ||||||| |||||||||||||||||| |
|
|
| T |
9254876 |
tcaaggatgcgaaatgcaaattttgcattttgacatcaagccccataacatccttctcgatgagaactttaaccccaaagtttcagactttggtcttgca |
9254975 |
T |
|
| Q |
303 |
aaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaag |
402 |
Q |
| |
|
| ||||||||| ||| | ||| ||||| ||||| || || ||||| || |||||||| |||||||| || |||||||||||| |||||||||| || |
|
|
| T |
9254976 |
cagctttatccaaatgagattagtattgtcactttaaccgcagcaagggggacaattggatacatggctcctgaattgttctaccaaaatattggaggag |
9255075 |
T |
|
| Q |
403 |
tttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaat |
502 |
Q |
| |
|
| || || ||||||||||| ||||||||||||||||| || || ||||| |||| | || ||||||||| || || |||| ||| |||||| ||||| |
|
|
| T |
9255076 |
tatcgtacaaggccgatgtatatagctttggaatgcttttgattgaaatggcaagtaagaaaagaaatttaaatccacatgccgatcgttcaagtcaaat |
9255175 |
T |
|
| Q |
503 |
tttctttccctattggatttacaatgaattgattgaagaaagggagatagatatatctgga-gaagctaccgatgaagaaaagaaaaatgtgaagaagat |
601 |
Q |
| |
|
|||||||||| ||||||||| || ||||||||||||||| ||||||||| | |||| ||| ||| |||| ||||| || |||||||||||||| |
|
|
| T |
9255176 |
tttctttcccatttggatttatgatcaattgattgaagaaaaggagatagaaa----tggatgaaattacatatgaggaaaataataatgtgaagaagat |
9255271 |
T |
|
| Q |
602 |
gttcataat |
610 |
Q |
| |
|
||||||||| |
|
|
| T |
9255272 |
gttcataat |
9255280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 153 - 500
Target Start/End: Original strand, 9453622 - 9453969
Alignment:
| Q |
153 |
caaatgtacgagatatctcttggagttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataaca |
252 |
Q |
| |
|
||||| || ||||||||||||||||| || ||||||||| | ||| | |||||||| ||||| ||||||||||| ||||| ||||| |||||||| |||| |
|
|
| T |
9453622 |
caaatatatgagatatctcttggagtggctcgtggaatttcatatcttcatcaagggtgtgatatgcaaattttgcattttgatattaagcctcacaaca |
9453721 |
T |
|
| Q |
253 |
tacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgcaaaactttatccagttgacaatagcattgtaactttgactgctgcaagagg |
352 |
Q |
| |
|
| ||||||||| | | |||||| | ||||| ||||| |||||||||||||| |||||||| |||||||||||||||| ||||||| || |||||||| |
|
|
| T |
9453722 |
tccttcttgacgaaaatttcatccctaaagtttcagattttggtcttgcaaagctttatcctattgacaatagcattgtcgctttgacagcagcaagagg |
9453821 |
T |
|
| Q |
353 |
aacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaatgctcttaatggaaata |
452 |
Q |
| |
|
|||||||||||||||||| || |||||||||||| |||||||||| | | | || | ||||||||||||||||| ||||||||||| | || ||||| |
|
|
| T |
9453822 |
aacaattggttacatggctcctgaattgttctaccaaaatattgggagaatatcacacaaggccgatgtgtatagttttggaatgcttctgattgaaatt |
9453921 |
T |
|
| Q |
453 |
gcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaa |
500 |
Q |
| |
|
|||| ||||| ||||||||||| ||| |||| || ||||||||||| |
|
|
| T |
9453922 |
gcaagtaggagtagaaatttgaattcacatgctgagcattcaagccaa |
9453969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 24 - 523
Target Start/End: Original strand, 9432506 - 9433005
Alignment:
| Q |
24 |
aatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctcttgatagatatatttcctcta |
123 |
Q |
| |
|
|||||||| |||| ||||| |||||||| || ||||||||| ||||||||||| || | ||||||||||||||| ||||||| |||||||| | | |
|
|
| T |
9432506 |
aatgtggtaagactcgttgggttttgtgtcgaaggatcaaaacgcgctcttgtttacgagtacatgcccaatggctcacttgataaatatattttcaaca |
9432605 |
T |
|
| Q |
124 |
gagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaat |
223 |
Q |
| |
|
||| | ||| || || || | | ||||| || ||||||||||||||||| || | ||||||| | ||| | ||||| |||||||| |||||||| |
|
|
| T |
9432606 |
aagagggagttatatctctatctaacgaccaaatatatgagatatctcttggagtggctcttggaatttcatatcttcatcagggttgtgatatgcaaat |
9432705 |
T |
|
| Q |
224 |
tttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgcaaaactttatccagttgacaat |
323 |
Q |
| |
|
||| ||||| ||||| |||||||| ||||| ||||| ||| | | |||||| | ||||| || ||||||||||||||||| |||||||| ||||||| |
|
|
| T |
9432706 |
tttgcattttgatattaagcctcacaacatccttctggacgaaaatttcatccctaaagtttcggactttggtcttgcaaagctttatcctattgacaaa |
9432805 |
T |
|
| Q |
324 |
agcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgt |
423 |
Q |
| |
|
||||||| |||||||| || |||||||||||||||||||||||||| || |||||||||||| |||||||||| | | | || | ||||||||||||| |
|
|
| T |
9432806 |
agcattgccactttgacggcagcaagaggaacaattggttacatggctcctgaattgttctaccaaaatattgggagaatatcacacaaggccgatgtgt |
9432905 |
T |
|
| Q |
424 |
atagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaattttctttccctattggattta |
523 |
Q |
| |
|
|||| ||||||||||| || || ||||| |||| || |||||||||||||| ||| |||| || ||||||| ||| ||| || |||| ||||||||| |
|
|
| T |
9432906 |
atagttttggaatgcttttgattgaaatcgcaagtagaagaagaaatttgaattcacatgctgagcattcaagtcaactttatttccccttttggattta |
9433005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 153 - 523
Target Start/End: Complemental strand, 9399944 - 9399574
Alignment:
| Q |
153 |
caaatgtacgagatatctcttggagttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataaca |
252 |
Q |
| |
|
||||| || ||||||||||||||||| || | |||||| | ||| | ||||| |||||||| ||||||||||| ||||| ||||| |||||||| |||| |
|
|
| T |
9399944 |
caaatatatgagatatctcttggagtggctcaaggaatttcatatcttcatcagggttgtgatatgcaaattttgcattttgatattaagcctcacaaca |
9399845 |
T |
|
| Q |
253 |
tacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgcaaaactttatccagttgacaatagcattgtaactttgactgctgcaagagg |
352 |
Q |
| |
|
| ||||||||| | | |||||| | ||||| || ||||||||||||||||| |||||||| ||||||| ||||||| ||||||| || |||||||| |
|
|
| T |
9399844 |
tccttcttgacgaaaatttcatccctaaagtttcggactttggtcttgcaaagctttatcctattgacaaaagcattgccactttgatggcagcaagagg |
9399745 |
T |
|
| Q |
353 |
aacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaatgctcttaatggaaata |
452 |
Q |
| |
|
|||||||||||||||||| || ||| |||||| | |||||||||| | | || |||||||| ||||||||||||||||| ||||| || || ||||| |
|
|
| T |
9399744 |
aacaattggttacatggctcctgaactgttcttccaaaatattgggggaatatcatataaggctgatgtgtatagctttggtatgcttttgattgaaatt |
9399645 |
T |
|
| Q |
453 |
gcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaattttctttccctattggattta |
523 |
Q |
| |
|
|||| ||||||||||||||||| ||| |||| || ||||||| ||| ||| || |||| ||||||||| |
|
|
| T |
9399644 |
gcaagtaggagaagaaatttgaattcacatgctgagcattcaagtcaactttatttccccttttggattta |
9399574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 1 - 523
Target Start/End: Original strand, 9485835 - 9486357
Alignment:
| Q |
1 |
ctataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctc |
100 |
Q |
| |
|
||||||||| |||| |||| | |||||||| |||| |||| |||||||| || ||| ||||||||||||||||| || | ||||||||||||||| |
|
|
| T |
9485835 |
ctataggaagaatatatcattcaaatgtggtaagactcattgggttttgtgtcgaaggatcgaaacgtgctcttgtttacgagtacatgcccaatggctc |
9485934 |
T |
|
| Q |
101 |
tcttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttg |
200 |
Q |
| |
|
||||||| |||||||| | | ||| | ||| || ||||| | | ||||| || ||||||||||||||||| || ||||||||| | ||| | |
|
|
| T |
9485935 |
acttgataaatatattttcaacaaagagggagttatatctctaactaacgaccaaatatatgagatatctcttggagtggctcgtggaatttcatatctt |
9486034 |
T |
|
| Q |
201 |
catcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttg |
300 |
Q |
| |
|
|||||||| |||| ||||||||||| ||||| ||||| |||||||| ||||| ||||||||| | | || || | ||||| || ||||||||||||| |
|
|
| T |
9486035 |
catcaaggctgtggtatgcaaattttgcattttgatattaagcctcacaacattcttcttgacgaaaattttgtccctaaagtttcggactttggtcttg |
9486134 |
T |
|
| Q |
301 |
caaaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaa |
400 |
Q |
| |
|
|||| |||||||| ||||||| ||||||| || ||||| || |||||||||||||| ||||||||||| || |||||||||||| ||||||| || |
|
|
| T |
9486135 |
caaagctttatcctattgacaaaagcattgccaccttgacagcagcaagaggaacaatcggttacatggctcctgaattgttctaccaaaatatcggagg |
9486234 |
T |
|
| Q |
401 |
agtttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaa |
500 |
Q |
| |
|
| | || || ||||| || ||||||||||||||||||| || || ||||| |||| || |||||||||||||| || |||| || ||||||| ||| |
|
|
| T |
9486235 |
aatatcatacaaggctgacatgtatagctttggaatgcttttgattgaaatggcaagtagaagaagaaatttgaatacacatgctgagcattcaagtcaa |
9486334 |
T |
|
| Q |
501 |
attttctttccctattggattta |
523 |
Q |
| |
|
||| |||||||| ||||||||| |
|
|
| T |
9486335 |
ctttactttcccttttggattta |
9486357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 40 - 448
Target Start/End: Original strand, 9104676 - 9105084
Alignment:
| Q |
40 |
ttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctcttgatagatatatttcctctagagaag--accatatt |
137 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||||| |||||||| ||||| |||||||||| || ||||| ||| | ||||| | |||| |
|
|
| T |
9104676 |
ttggattttgtattgagggatcaaaacgtgctcttgtttatgaattcatgcctaatggatctcttgataaatttattttctccaaagaagggagcataaa |
9104775 |
T |
|
| Q |
138 |
tccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaattttacatttcgata |
237 |
Q |
| |
|
| |||| || || |||| ||||| ||| | ||||||| || ||||| ||||||||| | || || || ||||| ||| | ||||||||||| |||| |
|
|
| T |
9104776 |
t--ttaagctacaacaaaatttacgatatagcaattggagtagctcgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgata |
9104873 |
T |
|
| Q |
238 |
tcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgcaaaactttatccagttgacaatagcattgtaacttt |
337 |
Q |
| |
|
||||||| || || || |||||||| || |||| ||| | ||| |||| |||||||| | ||||| || ||||| | || || ||| | | || | |
|
|
| T |
9104874 |
tcaagccccacaatatccttcttgatgagaactttatccctaaactatctgactttggattggcaaagctacatccaatagagaacagcgtcatcacaat |
9104973 |
T |
|
| Q |
338 |
gactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaatg |
437 |
Q |
| |
|
||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||| |
|
|
| T |
9104974 |
gactgctgcaagaggtacaattggatatatggctccagaattgttctacaaaaatattgggggagtttcctataaggctgatgtttatagctttgggatg |
9105073 |
T |
|
| Q |
438 |
ctcttaatgga |
448 |
Q |
| |
|
|| || ||||| |
|
|
| T |
9105074 |
cttttgatgga |
9105084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 40 - 448
Target Start/End: Original strand, 9096494 - 9096902
Alignment:
| Q |
40 |
ttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctcttgatagatatatttcctctagagaag--accatatt |
137 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||||| |||||||| ||||| |||||||||| || ||||| ||| | ||||| | |||| |
|
|
| T |
9096494 |
ttggattttgtattgagggatcaaaacgtgctcttgtttatgaattcatgcctaatggatctcttgataaatttattttctccaaagaagggagcataaa |
9096593 |
T |
|
| Q |
138 |
tccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaattttacatttcgata |
237 |
Q |
| |
|
| |||| || || |||| ||||| ||| | ||||||| || ||||| ||||||||| | || || || ||||| ||| | ||||||||||| |||| |
|
|
| T |
9096594 |
t--ttaagctacaacaaaatttacgatatagcaattggagtagctcgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttgata |
9096691 |
T |
|
| Q |
238 |
tcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgcaaaactttatccagttgacaatagcattgtaacttt |
337 |
Q |
| |
|
||||||| || || || |||||||| || |||| ||| | ||| |||| |||||||| | ||||| || ||||| | || || ||| | | || | |
|
|
| T |
9096692 |
tcaagccccacaatatccttcttgatgagaactttatccctaaactatctgactttggattggcaaagctacatccaatagagaacagcgtcatcacaat |
9096791 |
T |
|
| Q |
338 |
gactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaatg |
437 |
Q |
| |
|
||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||| |||||||||||| || ||||| ||||||||||| ||| |
|
|
| T |
9096792 |
gactgctgcaagaggtacaattggatatatggctccagaattgttctacaaaaatattgggggagtttcctataaagctgatgtttatagctttgggatg |
9096891 |
T |
|
| Q |
438 |
ctcttaatgga |
448 |
Q |
| |
|
|| || ||||| |
|
|
| T |
9096892 |
cttttgatgga |
9096902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 199 - 451
Target Start/End: Complemental strand, 9384491 - 9384239
Alignment:
| Q |
199 |
tgcatcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtct |
298 |
Q |
| |
|
|||||||||| ||||| ||||||||| ||||||| ||||||||||||||||| || ||||| ||| | || || | | || || || || ||||| || |
|
|
| T |
9384491 |
tgcatcaaggatgtgatatgcaaattctacattttgatatcaagcctcataatattcttctagacgaagagtttgttccaaaggtttcggattttggact |
9384392 |
T |
|
| Q |
299 |
tgcaaaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggt |
398 |
Q |
| |
|
|||||| || ||||| || || |||||||||| || || ||||| ||||||||||| | ||||||||||| || ||| |||||||||||||||||||| |
|
|
| T |
9384391 |
tgcaaagctatatcctgtgaacgatagcattgttaccttaactgcggcaagaggaactttgggttacatggctcctgaactgttctacaaaaatattggt |
9384292 |
T |
|
| Q |
399 |
aaagtttcctataaggccgatgtgtatagctttggaatgctcttaatggaaat |
451 |
Q |
| |
|
||| || || ||||| ||||| ||||||||||||||||| || |||||||| |
|
|
| T |
9384291 |
ggagtgtcttacaaggctgatgtatatagctttggaatgcttttgatggaaat |
9384239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 199 - 451
Target Start/End: Original strand, 9233903 - 9234155
Alignment:
| Q |
199 |
tgcatcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtct |
298 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| ||||||||||||||||| || ||||| ||| | || ||| | | || || || || ||||| || |
|
|
| T |
9233903 |
tgcatcaaggttgtgatatgcaaattctacattttgatatcaagcctcataatattcttctagacgaagatttcgttccaaaggtttcggattttggact |
9234002 |
T |
|
| Q |
299 |
tgcaaaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggt |
398 |
Q |
| |
|
|||||| ||||| || || || |||||||||| | || ||||| ||||||||||| | ||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
9234003 |
tgcaaagctttaccctgtgaacgatagcattgttccgttaactgcggcaagaggaactttgggttacatggctcctgaattgttctacaaaaatattggt |
9234102 |
T |
|
| Q |
399 |
aaagtttcctataaggccgatgtgtatagctttggaatgctcttaatggaaat |
451 |
Q |
| |
|
||| || || || || ||||| || || ||||||||||| || |||||||| |
|
|
| T |
9234103 |
ggagtgtcgtacaaagctgatgtatacagttttggaatgcttttgatggaaat |
9234155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 172 - 439
Target Start/End: Original strand, 8873885 - 8874152
Alignment:
| Q |
172 |
ttggagttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggactt |
271 |
Q |
| |
|
||||||| || ||||| ||||||||| | ||||| || ||||| ||| | ||||| ||||| ||||| |||||||| ||||| |||||||| || |||| |
|
|
| T |
8873885 |
ttggagtagctcgtgggattgcttatctccatcatggatgtgaaatgaagattttgcattttgatattaagcctcacaacatccttcttgatgagaactt |
8873984 |
T |
|
| Q |
272 |
catcgccaaagtatcagactttggtcttgcaaaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggca |
371 |
Q |
| |
|
| | ||||| || |||||||| | || || || ||||| || || ||||||||||| || ||||||| |||||||| || ||||| || ||||| |
|
|
| T |
8873985 |
tactccgaaagtctctgactttggattggctaagctatatcctgtggagaatagcattgtcacaatgactgcggcaagaggtaccattggatatatggct |
8874084 |
T |
|
| Q |
372 |
ccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaatgct |
439 |
Q |
| |
|
||||||||||| || |||||||||||| ||| ||||||||||| ||||| ||||| ||||| ||||| |
|
|
| T |
8874085 |
ccagaattgttttataaaaatattggtggagtgtcctataaggctgatgtttatagttttgggatgct |
8874152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 172 - 448
Target Start/End: Original strand, 9142688 - 9142964
Alignment:
| Q |
172 |
ttggagttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggactt |
271 |
Q |
| |
|
||||||| || || |||||||||||| | || || || ||||| ||| | || |||||||| ||||||||||| ||||| || || ||||| || |||| |
|
|
| T |
9142688 |
ttggagtagctcgaggaattgcttatctccaccatggatgtgaaatgaagatattacattttgatatcaagccccataatattctgcttgatgagaactt |
9142787 |
T |
|
| Q |
272 |
catcgccaaag-tatcagactttggtcttgcaaaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggc |
370 |
Q |
| |
|
|| |||||| |||| |||||||| || ||||| || ||||| |||| ||||||||||| || ||||||| |||||||| || ||||| || ||||| |
|
|
| T |
9142788 |
tatt-ccaaagatatctgactttggactcgcaaagctatatccgattgagaatagcattgtcacaatgactgcagcaagaggtactattggatatatggc |
9142886 |
T |
|
| Q |
371 |
accagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaatgctcttaatgga |
448 |
Q |
| |
|
|| || |||||||||||||||||||| ||| ||||||||||||||||| ||||| || || ||||| || ||||| |
|
|
| T |
9142887 |
tccggagttgttctacaaaaatattgggggagtgtcctataaggccgatgtttatagtttcgggatgcttttgatgga |
9142964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 40 - 448
Target Start/End: Complemental strand, 9000088 - 8999680
Alignment:
| Q |
40 |
ttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctcttgatagatatatttcctctagagaagaccatatttc |
139 |
Q |
| |
|
||||||||||| | ||| ||| |||||||||||||||||||| |||||||| ||||| || ||||||| || ||||| ||||| ||||| | | |
|
|
| T |
9000088 |
ttggattttgtatcgagggatcgaaacgtgctcttgtttatgaattcatgcctaatggatcacttgataaatttattttctctaaagaaggaagtgtaaa |
8999989 |
T |
|
| Q |
140 |
cttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaattttacatttcgatatc |
239 |
Q |
| |
|
||| |||| ||||| | || ||||| ||||||| || ||||| ||||||||| | || || || || || ||| | ||||||||||| |||||| |
|
|
| T |
8999988 |
tataagctatagccaaatttttgacatatcagttggagtagctcgtgggattgcttatctccaccatggatgcgaaatgaagattttacattttgatatc |
8999889 |
T |
|
| Q |
240 |
aagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgcaaaactttatccagttgacaatagcattgtaactttga |
339 |
Q |
| |
|
|||||||| ||||| |||||||| | |||||| | ||||| || ||||| || | || || || ||||| || || ||||||||||| || ||| |
|
|
| T |
8999888 |
aagcctcacaacatccttcttgatgaaaacttcacaccaaaagtctctgacttcggattggctaagctatatcccgtggagaatagcattgtcacaatga |
8999789 |
T |
|
| Q |
340 |
ctgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaatgct |
439 |
Q |
| |
|
|||| |||||||| || ||||| || ||||| |||||||||||||| ||||||||||| ||| || |||||||| ||||| ||||||||||| ||||| |
|
|
| T |
8999788 |
ctgcggcaagaggtaccattggatatatggctccagaattgttctataaaaatattgggggagtgtcttataaggctgatgtttatagctttgggatgct |
8999689 |
T |
|
| Q |
440 |
cttaatgga |
448 |
Q |
| |
|
|| ||||| |
|
|
| T |
8999688 |
tttgatgga |
8999680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 222 - 448
Target Start/End: Complemental strand, 8964755 - 8964529
Alignment:
| Q |
222 |
attttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgcaaaactttatccagttgaca |
321 |
Q |
| |
|
||||| ||||| ||||| |||||||| ||||| |||||||| || | |||| | | ||||| || |||||||| | || || || ||||| || || | |
|
|
| T |
8964755 |
attttgcattttgatattaagcctcacaacatccttcttgatgagaatttcaccccaaaagtctctgactttggattggctaagctatatcctgtagaga |
8964656 |
T |
|
| Q |
322 |
atagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgt |
421 |
Q |
| |
|
|||||||||| || |||| || |||||||| || ||||| || ||||| |||||||||||||| ||||||||||| ||| ||||||||||| ||||| |
|
|
| T |
8964655 |
atagcattgtcacaatgacagcggcaagaggtaccattggatatatggctccagaattgttctataaaaatattgggggagtgtcctataaggctgatgt |
8964556 |
T |
|
| Q |
422 |
gtatagctttggaatgctcttaatgga |
448 |
Q |
| |
|
||||||||||| ||||| || ||||| |
|
|
| T |
8964555 |
ttatagctttgggatgcttttgatgga |
8964529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 60 - 456
Target Start/End: Complemental strand, 9056966 - 9056570
Alignment:
| Q |
60 |
tcaaaacgtgctcttgtttatgatttcatgcccaatggctctcttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgt |
159 |
Q |
| |
|
|||||||| |||||||||||||| || |||| ||||| |||||||||| |||||||| ||||| ||||| ||| |||| || || ||| || |
|
|
| T |
9056966 |
tcaaaacgagctcttgtttatgaatttatgcgtaatggatctcttgataaatatattttctctaaagaagggagtataaatttaagctacaaccaattgc |
9056867 |
T |
|
| Q |
160 |
acgagatatctcttggagttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttct |
259 |
Q |
| |
|
|||| || || ||||||| || ||||| |||| |||| | ||| | || ||||| ||| ||||||| ||||| ||||||||||| || || || || || |
|
|
| T |
9056866 |
acgatatttcaattggagtagctcgtgggattgattatctccataatggatgtgaaatgaaaattttgcattttgatatcaagccacacaatatcctact |
9056767 |
T |
|
| Q |
260 |
tgaccaggacttcatcgccaaag-tatcagactttggtcttgcaaaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaat |
358 |
Q |
| |
|
|||| || | || || |||||| |||| |||||||| || ||||| || |||||| || ||||||||||| || ||||||| || | ||| ||||| |
|
|
| T |
9056766 |
tgacgagaattttatt-ccaaagatatctgactttggactcgcaaagctatatccaattacgaatagcattgtcacaatgactgcagccaaaggcacaat |
9056668 |
T |
|
| Q |
359 |
tggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaa |
456 |
Q |
| |
|
||| || ||||| || |||||||| ||||||||||||||| ||| || |||||||| ||||| ||||| ||||| ||||| || |||||||| |||| |
|
|
| T |
9056667 |
tggatatatggctcctgaattgttttacaaaaatattggtggagtgtcgtataaggctgatgtttatagttttggtatgcttttgatggaaatggcaa |
9056570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 318 - 451
Target Start/End: Complemental strand, 9488697 - 9488564
Alignment:
| Q |
318 |
gacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccg |
417 |
Q |
| |
|
|||||||||||||| || | || |||||||||||||| || || ||||||||||||||||||||||| || |||||||| ||| || || || || | |
|
|
| T |
9488697 |
gacaatagcattgtgtctcttacagctgcaagaggaactatgggatacatggcaccagaattgttctataagaatattggaggagtatcgtacaaagcag |
9488598 |
T |
|
| Q |
418 |
atgtgtatagctttggaatgctcttaatggaaat |
451 |
Q |
| |
|
|||| ||||||||||||||| | ||||||||||| |
|
|
| T |
9488597 |
atgtttatagctttggaatgttgttaatggaaat |
9488564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 9082224 - 9082313
Alignment:
| Q |
40 |
ttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctcttgatagatatatttcctctagagaag |
129 |
Q |
| |
|
|||||||||| ||||| ||| |||||||||||||||||||| |||||||| ||||| |||||||||| || ||||| ||||| ||||| |
|
|
| T |
9082224 |
ttggattttgcattgagggatccaaacgtgctcttgtttatgaattcatgcctaatggatctcttgataaatttattttctctaaagaag |
9082313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 339 - 448
Target Start/End: Complemental strand, 10974372 - 10974263
Alignment:
| Q |
339 |
actgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaatgc |
438 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| || ||| ||||||||| ||||||||| | | | || || || || ||||| ||||||||||| ||| |
|
|
| T |
10974372 |
actgctgcaagaggaacgattggatacatggcccctgaactgttctacagaaatattggcacaatatcttacaaagctgatgtctatagctttgggatgt |
10974273 |
T |
|
| Q |
439 |
tcttaatgga |
448 |
Q |
| |
|
| |||||||| |
|
|
| T |
10974272 |
tgttaatgga |
10974263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 9488975 - 9488909
Alignment:
| Q |
40 |
ttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctcttga |
106 |
Q |
| |
|
|||| ||||||||||||||| ||||| | || ||||||||||| |||||||| ||||| |||||||| |
|
|
| T |
9488975 |
ttggcttttgtgttgagaaaacaaaaagagcacttgtttatgagttcatgcctaatggttctcttga |
9488909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 8964937 - 8964848
Alignment:
| Q |
40 |
ttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctcttgatagatatatttcctctagagaag |
129 |
Q |
| |
|
|||| |||||||| ||| |||||| ||||||||||||||||| |||||| | ||||| || ||||||| || ||||| ||||| ||||| |
|
|
| T |
8964937 |
ttggtttttgtgtcgagggatcaaaccgtgctcttgtttatgaattcatgtctaatggatcccttgataaatttattttctctaaagaag |
8964848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 288 - 448
Target Start/End: Original strand, 9152358 - 9152517
Alignment:
| Q |
288 |
gactttggtcttgcaaaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctaca |
387 |
Q |
| |
|
|||||||| || ||||| || ||||| | || ||||||||||| | | ||||||| ||||| | |||||||| || ||||| | ||||||||| |||| |
|
|
| T |
9152358 |
gactttggactcgcaaagctatatccgctagagaatagcattgtca-tatgactgcatcaagatgtacaattggatatatggctctagaattgttttaca |
9152456 |
T |
|
| Q |
388 |
aaaatattggtaaagtttcctataaggccgatgtgtatagctttggaatgctcttaatgga |
448 |
Q |
| |
|
|||||| || ||| ||||||||||||||||| ||||| ||||| ||||| || ||||| |
|
|
| T |
9152457 |
taaatatcgggggagtgtcctataaggccgatgtttatagttttgggatgcttttgatgga |
9152517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 520
Target Start/End: Original strand, 9082521 - 9082704
Alignment:
| Q |
337 |
tgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaat |
436 |
Q |
| |
|
||||||| |||||||| |||||||| || ||||| || || || |||||||||||||| || ||| || || ||||| ||||| ||||| ||||| || |
|
|
| T |
9082521 |
tgactgcagcaagaggtacaattggatatatggctcctgagttattctacaaaaatatagggggagtgtcgtacaaggctgatgtttatagttttgggat |
9082620 |
T |
|
| Q |
437 |
gctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaattttctttccctattggat |
520 |
Q |
| |
|
||| || ||||| || |||| || ||| | ||| ||||| | || ||||| ||||||||||| ||| ||||||| |||||| |
|
|
| T |
9082621 |
gcttttgatggagatggcaagcaagaggaaaaacctgaacaccaaggcagagcattcaagccaactttattttcccttttggat |
9082704 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 9400034 - 9399980
Alignment:
| Q |
63 |
aaacgtgctcttgtttatgatttcatgcccaatggctctcttgatagatatattt |
117 |
Q |
| |
|
||||| ||||||||||| || | ||||||||||||||| ||||||| |||||||| |
|
|
| T |
9400034 |
aaacgagctcttgtttacgagtacatgcccaatggctcacttgataaatatattt |
9399980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 9453528 - 9453586
Alignment:
| Q |
59 |
atcaaaacgtgctcttgtttatgatttcatgcccaatggctctcttgatagatatattt |
117 |
Q |
| |
|
||||||||| ||||||||||| || | ||||||||| ||||| ||||||| |||||||| |
|
|
| T |
9453528 |
atcaaaacgcgctcttgtttacgagtacatgcccaaaggctcacttgataaatatattt |
9453586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 451
Target Start/End: Complemental strand, 9464078 - 9463970
Alignment:
| Q |
342 |
gctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaagtttcctataaggccgatgtgtatagctttggaatgctct |
441 |
Q |
| |
|
|||||||||||||| || || |||||||||||||| |||||||| || || ||||| ||| || || || || ||||| |||||| |||||||| | | |
|
|
| T |
9464078 |
gctgcaagaggaactatgggatacatggcaccagagttgttctataagaacattggaggagtatcgtacaaagcagatgtttatagc-ttggaatgttgt |
9463980 |
T |
|
| Q |
442 |
taatggaaat |
451 |
Q |
| |
|
|||||||||| |
|
|
| T |
9463979 |
taatggaaat |
9463970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 235; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 3 - 553
Target Start/End: Original strand, 15926844 - 15927394
Alignment:
| Q |
3 |
ataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctctc |
102 |
Q |
| |
|
||||||| |||||||||||||||||| || |||||| ||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
15926844 |
ataggaagaatacatcacaccaatgtagttcgacttattggattttgtgttgagggatcaaagcgtgctcttgtttatgaattcatgcccaatggttctc |
15926943 |
T |
|
| Q |
103 |
ttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttgca |
202 |
Q |
| |
|
|||||| ||||||||| ||||| || || ||| || ||||||||||||||||||| |||||||||||||||||||| ||||| || ||||| || || |
|
|
| T |
15926944 |
ttgataaatatatttcttctagcgaggatgctatctctctaacttataagcaaatgtatgagatatctcttggagttgctcgtggtatggcttacttaca |
15927043 |
T |
|
| Q |
203 |
tcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttgca |
302 |
Q |
| |
|
|||||| ||| ||||||||||||| ||||| || |||||||| |||||||| |||||||| || |||| ||| ||||||| || ||||||||||||||| |
|
|
| T |
15927044 |
tcaaggatgtaacatgcaaattttgcattttgacatcaagccccataacatccttcttgatgagaactttatccccaaagtttccgactttggtcttgca |
15927143 |
T |
|
| Q |
303 |
aaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaaag |
402 |
Q |
| |
|
|| |||||||| ||| | ||| ||||| ||||| ||||| ||||||||||| ||||| |||||||| || ||||| ||||||||||||||||| || |
|
|
| T |
15927144 |
aagctttatcctaatgagattagtattgtcactttaactgcagcaagaggaacgattggatacatggctcctgaattattctacaaaaatattggaggag |
15927243 |
T |
|
| Q |
403 |
tttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaat |
502 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||| || |||||||| |||| | |||||||||||| || || |||| ||| |||||||||| | |
|
|
| T |
15927244 |
tttcgtataaggccgatgtatatagctttggaatgcttttgatggaaatggcaagtaagagaagaaatttaaatccacatgcggatcgttcaagccaact |
15927343 |
T |
|
| Q |
503 |
tttctttccctattggatttacaatgaattgattgaagaaagggagataga |
553 |
Q |
| |
|
|||||| || | ||||||||| ||| ||||||||||| ||||||||||||| |
|
|
| T |
15927344 |
tttcttccctttttggatttataatcaattgattgaaaaaagggagataga |
15927394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 553
Target Start/End: Complemental strand, 9160056 - 9159504
Alignment:
| Q |
1 |
ctataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtgctcttgtttatgatttcatgcccaatggctc |
100 |
Q |
| |
|
||||||||| |||||| || | |||||||| ||||| ||||||||||||| |||| ||||||| || ||||||||||||| ||||||||||| ||||| |
|
|
| T |
9160056 |
ctataggaagaatacaccatgcaaatgtggtaagacttattggattttgtgtggagagatcaaaatgtactcttgtttatgaattcatgcccaacggctc |
9159957 |
T |
|
| Q |
101 |
tcttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatctcttggagttgcacgtggaattgcttatttg |
200 |
Q |
| |
|
|||||||| ||| |||||||||| ||| || |||| ||||||||||| ||||||| ||||||||| ||||||| || |||||||||||||||||| |
|
|
| T |
9159956 |
tcttgataaatacatttcctctaaagatgatgttattaatctaacttataagaaaatgtatgagatatctattggagtggctcgtggaattgcttatttg |
9159857 |
T |
|
| Q |
201 |
catcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggacttcatcgccaaagtatcagactttggtcttg |
300 |
Q |
| |
|
|||||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||||||| || |||| ||| |||| || || ||||||||||||| |
|
|
| T |
9159856 |
catcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatacttcttgacgagaactttatccccaaggtttctgactttggtcttg |
9159757 |
T |
|
| Q |
301 |
caaaactttatccagttgacaatagcattgtaactttgactgctgcaagaggaacaattggttacatggcaccagaattgttctacaaaaatattggtaa |
400 |
Q |
| |
|
|||| |||||||| ||||||||| ||||||| ||| ||||| |||||||||||||||||||| ||||| || || ||||||||||||||||||||| |
|
|
| T |
9159756 |
caaagctttatcctaatgacaatagtattgtaaatttaactgcagcaagaggaacaattggttatatggctcccgagttgttctacaaaaatattggtgg |
9159657 |
T |
|
| Q |
401 |
agtttcctataaggccgatgtgtatagctttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaa |
500 |
Q |
| |
|
||| || || ||||| ||||| ||||| ||||||||||| || |||||||| |||| | | |||||||||| || || |||| ||| |||||||||| |
|
|
| T |
9159656 |
agtatcatacaaggctgatgtttatagttttggaatgcttttgatggaaatggcaagtaagcgaagaaatttaaatccacatgcggatcgttcaagccaa |
9159557 |
T |
|
| Q |
501 |
attttctttccctattggatttacaatgaattgattgaagaaagggagataga |
553 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||||||||| |||||||| |
|
|
| T |
9159556 |
cttttctttccctattggatttataatcaattgattgaagaaaacgagataga |
9159504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 154 - 263
Target Start/End: Complemental strand, 27692731 - 27692622
Alignment:
| Q |
154 |
aaatgtacgagatatctcttggagttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacat |
253 |
Q |
| |
|
|||| ||||| || ||||||||| || | ||||||||| || || ||||||||||||||||||||||| |||| || ||||| || ||||||||||| |
|
|
| T |
27692731 |
aaatctacgacatttctcttggaatttcccgtggaattcaatacttacatcaaggttgtgacatgcaaatcatacactttgatataaaacctcataacat |
27692632 |
T |
|
| Q |
254 |
acttcttgac |
263 |
Q |
| |
|
||||||||| |
|
|
| T |
27692631 |
tcttcttgac |
27692622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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