View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4381_low_86 (Length: 225)

Name: NF4381_low_86
Description: NF4381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4381_low_86
NF4381_low_86
[»] chr8 (37 HSPs)
chr8 (1-206)||(4077555-4077760)
chr8 (158-206)||(12800890-12800938)
chr8 (158-197)||(12748924-12748963)
chr8 (159-206)||(18533693-18533740)
chr8 (158-197)||(32051531-32051570)
chr8 (159-198)||(33105415-33105454)
chr8 (158-205)||(33373743-33373790)
chr8 (153-197)||(8881293-8881337)
chr8 (158-206)||(19163526-19163574)
chr8 (165-197)||(30176418-30176450)
chr8 (139-196)||(39821884-39821945)
chr8 (158-206)||(42172233-42172281)
chr8 (158-197)||(444436-444475)
chr8 (159-194)||(24195273-24195308)
chr8 (158-197)||(24838169-24838208)
chr8 (158-197)||(27587244-27587283)
chr8 (159-194)||(29716702-29716737)
chr8 (159-197)||(13124362-13124400)
chr8 (159-197)||(19260578-19260616)
chr8 (158-196)||(22775651-22775689)
chr8 (159-197)||(24023414-24023452)
chr8 (166-196)||(32421600-32421630)
chr8 (165-206)||(7996970-7997011)
chr8 (158-195)||(8717476-8717513)
chr8 (158-195)||(10871895-10871932)
chr8 (139-197)||(11708986-11709048)
chr8 (158-195)||(42208470-42208507)
chr8 (158-195)||(44794916-44794953)
chr8 (154-197)||(1921739-1921783)
chr8 (158-206)||(14598188-14598236)
chr8 (158-190)||(19778088-19778120)
chr8 (158-198)||(20275187-20275227)
chr8 (158-198)||(21061814-21061854)
chr8 (158-194)||(27718896-27718932)
chr8 (137-181)||(35198552-35198596)
chr8 (165-197)||(36428693-36428725)
chr8 (158-194)||(37141380-37141416)
[»] chr2 (43 HSPs)
chr2 (139-206)||(20565065-20565136)
chr2 (139-197)||(29544627-29544689)
chr2 (165-206)||(31543042-31543083)
chr2 (153-206)||(31815877-31815930)
chr2 (158-198)||(25186240-25186280)
chr2 (158-197)||(42791318-42791357)
chr2 (158-196)||(25625739-25625777)
chr2 (161-203)||(26387541-26387583)
chr2 (160-198)||(44810730-44810768)
chr2 (165-206)||(5168569-5168610)
chr2 (139-197)||(10735830-10735892)
chr2 (158-195)||(36359337-36359374)
chr2 (158-194)||(8091160-8091196)
chr2 (153-197)||(24592845-24592889)
chr2 (165-197)||(27848188-27848220)
chr2 (158-197)||(660821-660860)
chr2 (158-197)||(8781649-8781688)
chr2 (158-197)||(22709108-22709147)
chr2 (159-206)||(23250310-23250357)
chr2 (158-197)||(29734714-29734753)
chr2 (167-206)||(35456810-35456849)
chr2 (139-195)||(35820302-35820362)
chr2 (158-197)||(43043164-43043203)
chr2 (159-197)||(20200729-20200767)
chr2 (158-196)||(23407018-23407056)
chr2 (158-196)||(24593399-24593437)
chr2 (153-195)||(30089067-30089109)
chr2 (153-195)||(30125671-30125713)
chr2 (139-197)||(7206125-7206187)
chr2 (165-198)||(10811098-10811131)
chr2 (158-195)||(12124568-12124605)
chr2 (165-206)||(37852040-37852081)
chr2 (165-197)||(4180727-4180759)
chr2 (165-197)||(4927448-4927480)
chr2 (158-206)||(9547399-9547447)
chr2 (153-197)||(11560516-11560560)
chr2 (158-206)||(12599855-12599903)
chr2 (158-190)||(20455914-20455946)
chr2 (158-194)||(24579670-24579706)
chr2 (158-206)||(25612283-25612331)
chr2 (165-197)||(27411122-27411154)
chr2 (165-197)||(40853817-40853849)
chr2 (158-198)||(43117188-43117228)
[»] chr3 (43 HSPs)
chr3 (153-197)||(11358252-11358296)
chr3 (153-206)||(10922298-10922351)
chr3 (153-197)||(34899115-34899159)
chr3 (158-197)||(38130958-38130997)
chr3 (158-205)||(39779047-39779094)
chr3 (153-196)||(45431966-45432009)
chr3 (158-197)||(48849762-48849801)
chr3 (158-196)||(41817522-41817560)
chr3 (153-206)||(7464481-7464534)
chr3 (158-199)||(13042797-13042838)
chr3 (158-199)||(13050874-13050915)
chr3 (158-195)||(48656900-48656937)
chr3 (158-206)||(25727957-25728005)
chr3 (160-195)||(913601-913636)
chr3 (158-197)||(1111840-1111879)
chr3 (158-197)||(4601867-4601906)
chr3 (165-196)||(16663236-16663267)
chr3 (158-197)||(16792973-16793012)
chr3 (158-197)||(25340923-25340962)
chr3 (158-197)||(25441499-25441538)
chr3 (159-206)||(25527828-25527875)
chr3 (139-195)||(27185477-27185537)
chr3 (158-193)||(40575612-40575647)
chr3 (158-195)||(88606-88643)
chr3 (158-195)||(35863814-35863851)
chr3 (158-195)||(38034810-38034847)
chr3 (165-197)||(334846-334878)
chr3 (165-197)||(552204-552236)
chr3 (158-194)||(7626463-7626499)
chr3 (153-197)||(7738687-7738731)
chr3 (158-194)||(8238587-8238623)
chr3 (158-198)||(20400100-20400140)
chr3 (170-198)||(20906478-20906506)
chr3 (87-123)||(24475418-24475454)
chr3 (158-198)||(27065730-27065770)
chr3 (158-190)||(28266739-28266771)
chr3 (158-198)||(33745122-33745162)
chr3 (158-198)||(35191815-35191855)
chr3 (159-199)||(41990581-41990621)
chr3 (165-193)||(48315027-48315055)
chr3 (169-197)||(49082708-49082736)
chr3 (158-194)||(49975807-49975843)
chr3 (158-198)||(55126029-55126069)
[»] chr5 (31 HSPs)
chr5 (158-205)||(20721073-20721120)
chr5 (159-206)||(13864368-13864415)
chr5 (158-197)||(22522800-22522839)
chr5 (158-197)||(40715948-40715987)
chr5 (153-198)||(6424901-6424946)
chr5 (139-197)||(6489007-6489069)
chr5 (139-197)||(32200446-32200508)
chr5 (139-197)||(34436851-34436913)
chr5 (158-206)||(10531563-10531611)
chr5 (159-195)||(42473918-42473954)
chr5 (158-197)||(6624799-6624838)
chr5 (158-197)||(34191456-34191495)
chr5 (83-118)||(36977676-36977711)
chr5 (139-206)||(15889411-15889482)
chr5 (139-206)||(16701571-16701642)
chr5 (158-196)||(37932353-37932391)
chr5 (158-195)||(4763187-4763224)
chr5 (159-196)||(16579374-16579411)
chr5 (159-196)||(18589867-18589904)
chr5 (153-198)||(18789054-18789099)
chr5 (158-195)||(25979867-25979904)
chr5 (158-195)||(42817113-42817150)
chr5 (158-194)||(10704333-10704369)
chr5 (153-197)||(11720912-11720955)
chr5 (165-197)||(14474864-14474896)
chr5 (158-194)||(20688063-20688099)
chr5 (165-193)||(21139151-21139179)
chr5 (165-197)||(24408525-24408557)
chr5 (166-198)||(27086109-27086141)
chr5 (158-198)||(31877951-31877991)
chr5 (158-194)||(33928662-33928698)
[»] chr7 (41 HSPs)
chr7 (158-199)||(20085756-20085797)
chr7 (139-194)||(11908980-11909035)
chr7 (158-197)||(18714471-18714510)
chr7 (158-197)||(19599168-19599207)
chr7 (158-197)||(27462435-27462474)
chr7 (158-196)||(10244750-10244788)
chr7 (153-198)||(3830086-3830131)
chr7 (137-206)||(5579691-5579764)
chr7 (159-195)||(7670458-7670494)
chr7 (158-194)||(19626527-19626563)
chr7 (158-206)||(27833391-27833439)
chr7 (158-206)||(28736623-28736671)
chr7 (158-194)||(46737808-46737844)
chr7 (167-206)||(145550-145589)
chr7 (159-206)||(12167431-12167478)
chr7 (158-197)||(19416537-19416576)
chr7 (166-197)||(23147321-23147352)
chr7 (159-194)||(39280820-39280855)
chr7 (158-197)||(46987109-46987148)
chr7 (158-197)||(48629064-48629103)
chr7 (153-195)||(16577861-16577903)
chr7 (153-195)||(16587759-16587801)
chr7 (165-195)||(42095944-42095974)
chr7 (137-196)||(43539104-43539167)
chr7 (153-194)||(18023697-18023738)
chr7 (159-200)||(25602941-25602982)
chr7 (165-194)||(42753529-42753558)
chr7 (165-194)||(45046217-45046246)
chr7 (152-197)||(47155103-47155148)
chr7 (158-190)||(2618702-2618734)
chr7 (158-194)||(5041362-5041398)
chr7 (82-118)||(9157546-9157582)
chr7 (165-197)||(10242510-10242542)
chr7 (158-206)||(18773746-18773794)
chr7 (158-198)||(35222947-35222987)
chr7 (165-197)||(36121682-36121714)
chr7 (158-206)||(39801729-39801777)
chr7 (158-194)||(40867053-40867089)
chr7 (158-194)||(42829236-42829272)
chr7 (158-194)||(47342436-47342472)
chr7 (158-194)||(48065225-48065260)
[»] chr1 (53 HSPs)
chr1 (157-206)||(39252136-39252185)
chr1 (158-206)||(8269358-8269406)
chr1 (158-206)||(28016180-28016228)
chr1 (158-197)||(25532996-25533035)
chr1 (159-197)||(12268983-12269021)
chr1 (139-206)||(17139507-17139578)
chr1 (165-198)||(3937520-3937553)
chr1 (153-206)||(27533261-27533314)
chr1 (158-195)||(34521191-34521228)
chr1 (153-197)||(41973273-41973317)
chr1 (166-197)||(2994789-2994820)
chr1 (158-197)||(5907822-5907861)
chr1 (158-197)||(6000142-6000181)
chr1 (158-197)||(8736458-8736497)
chr1 (83-122)||(12880551-12880590)
chr1 (159-198)||(15668522-15668561)
chr1 (158-197)||(18166625-18166664)
chr1 (158-193)||(19620599-19620634)
chr1 (158-197)||(26803450-26803489)
chr1 (158-196)||(10654447-10654485)
chr1 (159-197)||(11681247-11681285)
chr1 (167-197)||(19795115-19795145)
chr1 (139-198)||(33020041-33020104)
chr1 (165-195)||(34595902-34595932)
chr1 (139-206)||(39252247-39252318)
chr1 (158-195)||(1605419-1605456)
chr1 (158-195)||(1794619-1794656)
chr1 (158-191)||(4968620-4968653)
chr1 (153-206)||(9005697-9005750)
chr1 (158-195)||(26755639-26755676)
chr1 (158-195)||(29739360-29739397)
chr1 (139-197)||(41763154-41763216)
chr1 (165-197)||(3481591-3481623)
chr1 (169-197)||(6423760-6423788)
chr1 (158-198)||(9929229-9929269)
chr1 (158-198)||(11462920-11462960)
chr1 (165-197)||(12212325-12212357)
chr1 (136-197)||(13401594-13401659)
chr1 (158-194)||(16033452-16033488)
chr1 (158-206)||(16307672-16307720)
chr1 (169-205)||(18186711-18186747)
chr1 (158-206)||(29233964-29234012)
chr1 (158-206)||(29987102-29987150)
chr1 (159-195)||(32950762-32950798)
chr1 (153-197)||(33153879-33153923)
chr1 (158-194)||(34848499-34848535)
chr1 (166-194)||(36679621-36679649)
chr1 (158-190)||(38448872-38448904)
chr1 (158-190)||(40613046-40613078)
chr1 (166-194)||(45003431-45003459)
chr1 (158-190)||(45481516-45481548)
chr1 (158-194)||(46707895-46707931)
chr1 (165-197)||(49431992-49432024)
[»] chr4 (59 HSPs)
chr4 (158-198)||(675941-675981)
chr4 (158-206)||(11949753-11949801)
chr4 (158-198)||(20383511-20383551)
chr4 (139-196)||(20799394-20799455)
chr4 (158-197)||(49041980-49042019)
chr4 (159-197)||(19479476-19479514)
chr4 (139-206)||(21317328-21317399)
chr4 (158-195)||(7230303-7230340)
chr4 (153-194)||(17423179-17423220)
chr4 (153-206)||(23775536-23775589)
chr4 (153-194)||(25783451-25783492)
chr4 (158-206)||(9946450-9946498)
chr4 (165-197)||(11198358-11198390)
chr4 (158-206)||(21114295-21114343)
chr4 (158-198)||(28435246-28435286)
chr4 (158-206)||(37921769-37921817)
chr4 (165-197)||(44815971-44816003)
chr4 (165-197)||(47814250-47814282)
chr4 (158-198)||(49473668-49473708)
chr4 (158-194)||(49953405-49953441)
chr4 (165-197)||(54294421-54294453)
chr4 (139-195)||(5924649-5924709)
chr4 (158-197)||(7371547-7371586)
chr4 (157-200)||(16737093-16737136)
chr4 (139-195)||(50362140-50362200)
chr4 (158-197)||(56551591-56551630)
chr4 (159-197)||(3936651-3936689)
chr4 (158-196)||(22040673-22040711)
chr4 (158-196)||(43722788-43722826)
chr4 (139-194)||(54500569-54500628)
chr4 (159-197)||(54857614-54857652)
chr4 (158-195)||(281614-281651)
chr4 (165-198)||(6087777-6087810)
chr4 (158-195)||(12322696-12322733)
chr4 (158-195)||(16304099-16304136)
chr4 (165-206)||(17729456-17729497)
chr4 (165-206)||(18094435-18094476)
chr4 (153-206)||(21318243-21318296)
chr4 (159-196)||(23225889-23225926)
chr4 (165-206)||(24664981-24665022)
chr4 (158-195)||(29908079-29908116)
chr4 (165-206)||(48694640-48694681)
chr4 (159-200)||(50668364-50668405)
chr4 (158-206)||(8607150-8607198)
chr4 (165-197)||(10035295-10035327)
chr4 (153-205)||(14197422-14197474)
chr4 (165-197)||(14202478-14202510)
chr4 (165-197)||(19314197-19314229)
chr4 (158-206)||(19908715-19908763)
chr4 (153-197)||(22630359-22630403)
chr4 (158-206)||(24079830-24079878)
chr4 (158-190)||(34834012-34834044)
chr4 (166-194)||(37193280-37193308)
chr4 (153-197)||(38374975-38375019)
chr4 (158-198)||(38453288-38453328)
chr4 (158-194)||(42845048-42845084)
chr4 (158-190)||(46676504-46676536)
chr4 (158-194)||(49952571-49952607)
chr4 (165-197)||(50152237-50152269)
[»] scaffold1127 (1 HSPs)
scaffold1127 (159-198)||(1163-1202)
[»] chr6 (39 HSPs)
chr6 (137-197)||(655748-655812)
chr6 (158-197)||(8569732-8569771)
chr6 (153-198)||(24373708-24373753)
chr6 (158-195)||(33824904-33824941)
chr6 (165-197)||(291397-291429)
chr6 (153-205)||(32524411-32524463)
chr6 (158-197)||(2726416-2726455)
chr6 (153-196)||(8637437-8637480)
chr6 (159-206)||(15187087-15187134)
chr6 (159-206)||(15473472-15473519)
chr6 (159-198)||(18253337-18253376)
chr6 (158-197)||(20744161-20744200)
chr6 (158-197)||(29740505-29740544)
chr6 (158-197)||(33976267-33976306)
chr6 (164-206)||(2546209-2546251)
chr6 (159-197)||(9111071-9111109)
chr6 (159-193)||(12215777-12215811)
chr6 (159-197)||(13496140-13496178)
chr6 (153-195)||(16390447-16390489)
chr6 (153-195)||(17151254-17151296)
chr6 (158-196)||(31971552-31971590)
chr6 (159-197)||(34481413-34481451)
chr6 (165-206)||(4455586-4455627)
chr6 (158-195)||(8629697-8629734)
chr6 (158-191)||(28231430-28231463)
chr6 (158-206)||(788889-788937)
chr6 (158-198)||(3808116-3808156)
chr6 (158-190)||(4450285-4450317)
chr6 (153-193)||(8916477-8916517)
chr6 (165-205)||(9392659-9392699)
chr6 (158-206)||(12591017-12591065)
chr6 (159-199)||(12808893-12808933)
chr6 (153-197)||(14918299-14918343)
chr6 (159-195)||(15155759-15155795)
chr6 (158-206)||(16204780-16204828)
chr6 (158-194)||(19265526-19265562)
chr6 (158-206)||(24623307-24623355)
chr6 (158-194)||(26356083-26356119)
chr6 (166-198)||(26548282-26548314)
[»] scaffold1619 (1 HSPs)
scaffold1619 (158-198)||(1054-1094)
[»] scaffold0334 (1 HSPs)
scaffold0334 (158-206)||(5205-5253)
[»] scaffold0038 (1 HSPs)
scaffold0038 (158-191)||(31927-31960)
[»] scaffold0262 (1 HSPs)
scaffold0262 (166-198)||(15928-15960)
[»] scaffold0238 (1 HSPs)
scaffold0238 (158-198)||(25412-25452)
[»] scaffold0050 (1 HSPs)
scaffold0050 (158-206)||(53370-53418)
[»] scaffold0028 (1 HSPs)
scaffold0028 (158-194)||(72777-72813)
[»] scaffold0026 (1 HSPs)
scaffold0026 (158-190)||(75348-75380)
[»] scaffold0021 (1 HSPs)
scaffold0021 (158-206)||(161164-161212)
[»] scaffold0016 (1 HSPs)
scaffold0016 (158-194)||(99060-99096)


Alignment Details
Target: chr8 (Bit Score: 174; Significance: 9e-94; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 4077555 - 4077760
Alignment:
Q  1 caaaaaagttaatttttacttaatattttttaagttgtgttacgttgtgttacttaatannnnnnnnaaataattttatgagaatttattcaaaaatagt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  4077555 caaaaaagttaatttttacttaatattttttaagttgtgttacgttgtgttacttaatattttttaaaaataattttatgagaatttattcaaaaatagt 4077654  T
Q  101 aagagttatttcaaactcgttttataaaaatagtatttgtgagcttagctcagtagcgacaattcataatatatgcaaggtccggggttcaaaccccaac 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4077655 aaaagttatttcaaactcgttttataaaaatagtatttgtgagcttagctcagtagcgacaattcataatatatgcaaggttcggggttcaaaccccaac 4077754  T
Q  201 taccac 206  Q
    ||||||    
T  4077755 taccac 4077760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 12800938 - 12800890
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||||||||||||||||||||||||||||||| || |||||    
T  12800938 gacaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 12800890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 12748924 - 12748963
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  12748924 gacaatgcataatatatgcaaggtccggggttcaaacccc 12748963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 18533693 - 18533740
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  18533693 acaatgcataatatatgcaagatccggggttcaaaccccaaccaccac 18533740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 32051570 - 32051531
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  32051570 gacaatgcataatatatgcaaggtccggggttcaaacccc 32051531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 33105415 - 33105454
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  33105415 acaatgcataatatatgcaaggtccggggttcaaacccca 33105454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 33373790 - 33373743
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactacca 205  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  33373790 gacaattcataatatatgtaaggtctggggttcaaaccccaacaacca 33373743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 8881293 - 8881337
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||| |||||| ||||||||||||||||||| |||||||||||||    
T  8881293 gtagggacaatgcataatatatgcaaggtccagggttcaaacccc 8881337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 19163574 - 19163526
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| |||||| |||||||||||||||||||||||||| || |||||    
T  19163574 gacaatgcataatttatgcaaggtccggggttcaaaccccgaccaccac 19163526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 30176450 - 30176418
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||||||||||||||||||    
T  30176450 cataatatatgcaaggtccggggttcaaacccc 30176418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 39821884 - 39821945
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    ||||||||||||||||    || |||||| |||||||||||||||||| |||||||||||||    
T  39821884 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaaccc 39821945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 42172281 - 42172233
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||||||||||||| ||||| |||||||||||||| |||||    
T  42172281 gacaatgcataatatatgcaagatccggagttcaaaccccaaccaccac 42172233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 444436 - 444475
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||||||||||||||||||||||| |||||||    
T  444436 gacaatgcataatatatgcaaggtccggggtttaaacccc 444475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 194
Target Start/End: Original strand, 24195273 - 24195308
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaac 194  Q
    ||||| ||||||||||||||||||||||||||||||    
T  24195273 acaatacataatatatgcaaggtccggggttcaaac 24195308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 24838208 - 24838169
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  24838208 gacaatgcataaaatatgcaaggtccggggttcaaacccc 24838169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 27587244 - 27587283
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  27587244 gacaatgcatgatatatgcaaggtccggggttcaaacccc 27587283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 194
Target Start/End: Complemental strand, 29716737 - 29716702
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||||||||||||||||||||||||| |||||||    
T  29716737 acaattcataatatatgcaaggtccgggattcaaac 29716702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 13124400 - 13124362
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  13124400 acaatgcataaaatatgcaaggtccggggttcaaacccc 13124362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 19260616 - 19260578
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  19260616 acaatgcataatatatgtaaggtccggggttcaaacccc 19260578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 22775651 - 22775689
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  22775651 gacaatgcataatttatgcaaggtccggggttcaaaccc 22775689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 24023452 - 24023414
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  24023452 acaatgcataaaatatgcaaggtccggggttcaaacccc 24023414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 196
Target Start/End: Original strand, 32421600 - 32421630
Alignment:
Q  166 ataatatatgcaaggtccggggttcaaaccc 196  Q
    |||||||||||||||||||||||||||||||    
T  32421600 ataatatatgcaaggtccggggttcaaaccc 32421630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 7996970 - 7997011
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||||||||||||||| |||||||||||||| || |||||    
T  7996970 cataatatatgcaaggtctggggttcaaaccccgaccaccac 7997011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 8717513 - 8717476
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  8717513 gacaatgcataatatatgcaaggttcggggttcaaacc 8717476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 10871932 - 10871895
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  10871932 gacaatgcataatgtatgcaaggtccggggttcaaacc 10871895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 11708986 - 11709048
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||    || |||||| ||||||||||||||||||||  |||||||||||    
T  11708986 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccgaagttcaaacccc 11709048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 42208507 - 42208470
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  42208507 gacaatgcataatatatgcaaggtccgaggttcaaacc 42208470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 44794916 - 44794953
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  44794916 gacaatgcataatatatgcaaggtccggagttcaaacc 44794953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 1921739 - 1921783
Alignment:
Q  154 tagcgacaattcataa-tatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||    
T  1921739 tagcgacaatgcataaatatatgcaaggtccggggttcgaacccc 1921783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 14598236 - 14598188
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||||||| ||||||| ||||||||||||||| || |||||    
T  14598236 gacaatgcataatataagcaaggtgcggggttcaaaccccgaccaccac 14598188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 19778088 - 19778120
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttc 190  Q
    |||||| ||||||||||||||||||||||||||    
T  19778088 gacaatgcataatatatgcaaggtccggggttc 19778120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 20275227 - 20275187
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||||| ||||||||| ||||||||||||||||    
T  20275227 gacaatgcataatacatgcaaggttcggggttcaaacccca 20275187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 21061854 - 21061814
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||||| ||||||||| ||||||||||||||||    
T  21061854 gacaatgcataatacatgcaaggttcggggttcaaacccca 21061814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 27718932 - 27718896
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  27718932 gacaatgcataatatatgcaaggtccggagttcaaac 27718896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 35198596 - 35198552
Alignment:
Q  137 ttgtgagcttagctcagtagcgacaattcataatatatgcaaggt 181  Q
    ||||||||||||||||  || |||||| |||||||||||||||||    
T  35198596 ttgtgagcttagctcaacagggacaatgcataatatatgcaaggt 35198552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 36428725 - 36428693
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||| ||||||||||||||    
T  36428725 cataatatatgcaaggtcaggggttcaaacccc 36428693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 37141380 - 37141416
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  37141380 gacaatgcataatatatgcaaggttcggggttcaaac 37141416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 20565136 - 20565065
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||||||    || |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  20565136 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccaaccaccac 20565065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 29544627 - 29544689
Alignment:
Q  139 gtgagcttagctca----gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||    |||| |||||| |||||||||||||||||||||||||||||||||    
T  29544627 gtgagcttagctcaattggtagggacaatgcataatatatgcaaggtccggggttcaaacccc 29544689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 31543042 - 31543083
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  31543042 cataatatatgcaaggtccggggttcaaaccccaaccaccac 31543083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 31815930 - 31815877
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||| |||||| ||||||||||||||||||||||||||||||||| || |||||    
T  31815930 gtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 31815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 25186280 - 25186240
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  25186280 gacaatgcataatatatgcaaggtccggggttcaaacccca 25186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 42791318 - 42791357
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  42791318 gacaatgcataatatatgcaaggtccggggttcaaacccc 42791357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 25625739 - 25625777
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  25625739 gacaattcataatatatgtaaggtccggggttcaaaccc 25625777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 26387583 - 26387541
Alignment:
Q  161 aattcataatatatgcaaggtccggggttcaaaccccaactac 203  Q
    ||||||||||||||||||||||||| ||||||||||| |||||    
T  26387583 aattcataatatatgcaaggtccggagttcaaaccccgactac 26387541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 44810730 - 44810768
Alignment:
Q  160 caattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  44810730 caatacataatatatgcaaggtccggggttcaaacccca 44810768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 5168610 - 5168569
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||||||| ||||||||||||||| ||||||||    
T  5168610 cataatatatgcaaggttcggggttcaaaccccgactaccac 5168569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 10735892 - 10735830
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||    || ||| || |||||||||||||||||||||||||||||||||    
T  10735892 gtgagcttagctcagttggtagggacgatgcataatatatgcaaggtccggggttcaaacccc 10735830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 36359337 - 36359374
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||||||||||||||||||||||||||||    
T  36359337 gacaatgcataatatatgcaaggtccggggttcaaacc 36359374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 8091196 - 8091160
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||||||||||||||||    
T  8091196 gacaatgcataatatatgcaaggtccggggttcaaac 8091160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 24592889 - 24592845
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||    
T  24592889 gtagggacaatgcataatatatgcaaggtctggggttcaaacccc 24592845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 27848188 - 27848220
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||||||||||||||||||    
T  27848188 cataatatatgcaaggtccggggttcaaacccc 27848220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 660860 - 660821
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  660860 gacaatgcataatatatgcaaggtccagggttcaaacccc 660821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 8781688 - 8781649
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  8781688 gacaatgcataatgtatgcaaggtccggggttcaaacccc 8781649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 22709108 - 22709147
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  22709108 gacaatgcataaaatatgcaaggtccggggttcaaacccc 22709147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 23250357 - 23250310
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||| ||||||||||||||||||| ||||||||||||| || |||||    
T  23250357 acaatgcataatatatgcaaggtccagggttcaaaccccgaccaccac 23250310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 29734714 - 29734753
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  29734714 gacaatgcataatatatgcaaggtccgtggttcaaacccc 29734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 35456849 - 35456810
Alignment:
Q  167 taatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  35456849 taatatatgcaaggttcggggttcaaaccccaaccaccac 35456810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 35820362 - 35820302
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    ||||||||||||||||    || |||||| ||||||| |||||||||||||||||||||||    
T  35820362 gtgagcttagctcagttggtagggacaatgcataatacatgcaaggtccggggttcaaacc 35820302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 43043203 - 43043164
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  43043203 gacaatgcataatgtatgcaaggtccggggttcaaacccc 43043164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 20200729 - 20200767
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  20200729 acaatgcataatatatgcaaggtccagggttcaaacccc 20200767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 23407056 - 23407018
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  23407056 gacaatgcataatatatgcaaggtctggggttcaaaccc 23407018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 24593399 - 24593437
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  24593399 gacaatgcataatatatgcaaggtccggggttcgaaccc 24593437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 30089067 - 30089109
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||| |||||| |||||||||| ||||||||||||||||||||    
T  30089067 gtagggacaatgcataatatatacaaggtccggggttcaaacc 30089109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 30125671 - 30125713
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||| |||||| |||||||||| ||||||||||||||||||||    
T  30125671 gtagggacaatgcataatatatacaaggtccggggttcaaacc 30125713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 7206125 - 7206187
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||    || |||||| |||||||||||||||||||| |||| |||||||    
T  7206125 gtgagcttagctcagttggtagagacaatgcataatatatgcaaggtccgaggtttaaacccc 7206187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 10811098 - 10811131
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccca 198  Q
    ||||| ||||||||||||||||||||||||||||    
T  10811098 cataaaatatgcaaggtccggggttcaaacccca 10811131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 12124568 - 12124605
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  12124568 gacaatgcataatatatgcaaggtccggggttcgaacc 12124605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 37852040 - 37852081
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||||||||| |||||||||||| ||| |||||    
T  37852040 cataatatatgcaaggtccagggttcaaaccctaaccaccac 37852081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 4180727 - 4180759
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| |||||||||||||||||||||||||||    
T  4180727 cataaaatatgcaaggtccggggttcaaacccc 4180759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 4927480 - 4927448
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||| |||||||||||||||||||||    
T  4927480 cataatatatgtaaggtccggggttcaaacccc 4927448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 9547447 - 9547399
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| |||||||||||||||||  |||||||||||||| || |||||    
T  9547447 gacaatgcataatatatgcaaggtttggggttcaaaccccgaccaccac 9547399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 11560516 - 11560560
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||| |||||| ||||||||||||||||| | |||||||||||||    
T  11560516 gtagggacaatgcataatatatgcaaggttcagggttcaaacccc 11560560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 12599903 - 12599855
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| |||||||||||||||||| ||||||| |||||| || |||||    
T  12599903 gacaatacataatatatgcaaggtctggggttcgaaccccgaccaccac 12599855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 20455914 - 20455946
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttc 190  Q
    |||||| ||||||||||||||||||||||||||    
T  20455914 gacaatgcataatatatgcaaggtccggggttc 20455946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 24579706 - 24579670
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  24579706 gacaatgcataatatatgcaaggtccagggttcaaac 24579670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 25612331 - 25612283
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| |||||||||||||||||||||| ||||| |||| || |||||    
T  25612331 gacaatgcataatatatgcaaggtccgggattcaacccccgaccaccac 25612283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 27411122 - 27411154
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||||||||||| ||||||    
T  27411122 cataatatatgcaaggtccggggttcgaacccc 27411154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 40853849 - 40853817
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||||||||| |||||||||    
T  40853849 cataatatatgcaaggtccggggatcaaacccc 40853817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 43117228 - 43117188
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| |||||||||||||||||| | |||||||||||||    
T  43117228 gacaatgcataatatatgcaaggtctgaggttcaaacccca 43117188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 11358252 - 11358296
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  11358252 gtagcgacaattcataatatatgcaagatccggggttcaaacccc 11358296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 10922351 - 10922298
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||| |||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  10922351 gtagggacaatgcataatatatgcaagatccggggttcaaaccccgactaccac 10922298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 34899115 - 34899159
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||| |||||| |||||||||||||||||||||||||||||||||    
T  34899115 gtagggacaatgcataatatatgcaaggtccggggttcaaacccc 34899159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 38130997 - 38130958
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  38130997 gacaatgcataatatatgcaaggtccggggttcaaacccc 38130958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 39779047 - 39779094
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactacca 205  Q
    |||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  39779047 gacaatgcataatatatgcaaggttcggggttcaaaccccaaccacca 39779094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 45431966 - 45432009
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||| |||||| ||||||||||||||||||||||||||||||||    
T  45431966 gtagggacaatgcataatatatgcaaggtccggggttcaaaccc 45432009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 48849801 - 48849762
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  48849801 gacaatgcataatatatgcaaggtccggggttcaaacccc 48849762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 41817522 - 41817560
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  41817522 gacaatgcataatatatgcaaggtccggggttcaaaccc 41817560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 7464534 - 7464481
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||| |||||| ||||||||||| ||||||||||||||||||||| || |||||    
T  7464534 gtagggacaatgcataatatatgtaaggtccggggttcaaaccccgaccaccac 7464481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 13042838 - 13042797
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaa 199  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  13042838 gacaatttataatatatgcaaggtccggggttcgaaccccaa 13042797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 13050915 - 13050874
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaa 199  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  13050915 gacaatttataatatatgcaaggtccggggttcgaaccccaa 13050874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 48656937 - 48656900
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||||||||||||||||||||||||||||    
T  48656937 gacaatgcataatatatgcaaggtccggggttcaaacc 48656900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 25728005 - 25727957
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||||||||||||||||||||||||||| ||| || |||||    
T  25728005 gacaatgcataatatatgcaaggtccggggttcaaatcccgaccaccac 25727957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 195
Target Start/End: Complemental strand, 913636 - 913601
Alignment:
Q  160 caattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||| |||||||||||||||||||||||||||||||    
T  913636 caatgcataatatatgcaaggtccggggttcaaacc 913601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 1111879 - 1111840
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  1111879 gacaatacataatatatgcaaggtctggggttcaaacccc 1111840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 4601867 - 4601906
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||||| |||||||||||||||||||||||||    
T  4601867 gacaatgcataataaatgcaaggtccggggttcaaacccc 4601906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 196
Target Start/End: Complemental strand, 16663267 - 16663236
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaaccc 196  Q
    ||||||||||||||||||||||||||||||||    
T  16663267 cataatatatgcaaggtccggggttcaaaccc 16663236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 16793012 - 16792973
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  16793012 gacaatgcataatatatgcaaggtccagggttcaaacccc 16792973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 25340962 - 25340923
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  25340962 gacaatgcataaaatatgcaaggtccggggttcaaacccc 25340923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 25441538 - 25441499
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  25441538 gacaatgcataatatatgcaaggtctggggttcaaacccc 25441499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 25527875 - 25527828
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||| ||||||| ||||||||||||| |||||| |||||    
T  25527875 acaattcataatacatgcaagttccggggttcaaaacccaaccaccac 25527828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 27185477 - 27185537
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    ||||||||||||||||    || |||||| |||||||||||||||||| ||||||||||||    
T  27185477 gtgagcttagctcagttggtagggacaatacataatatatgcaaggtctggggttcaaacc 27185537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Complemental strand, 40575647 - 40575612
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaa 193  Q
    |||||| |||||||||||||||||||||||||||||    
T  40575647 gacaatgcataatatatgcaaggtccggggttcaaa 40575612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 88643 - 88606
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  88643 gacaatacataatatatgcaaagtccggggttcaaacc 88606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 35863851 - 35863814
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  35863851 gacaatacataatatatgcaaggtctggggttcaaacc 35863814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 38034847 - 38034810
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  38034847 gacaatacataaaatatgcaaggtccggggttcaaacc 38034810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 334878 - 334846
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| |||||||||||||||||||||||||||    
T  334878 cataaaatatgcaaggtccggggttcaaacccc 334846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 552204 - 552236
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||||| |||||||||||||    
T  552204 cataatatatgcaaggtccagggttcaaacccc 552236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 7626499 - 7626463
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  7626499 gacaatgcataaaatatgcaaggtccggggttcaaac 7626463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 7738687 - 7738731
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||| |||||| ||||| |||||||||||||||||||||| ||||    
T  7738687 gtagggacaatgcataaaatatgcaaggtccggggttcaagcccc 7738731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 8238587 - 8238623
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| |||||||||||||||||| |||||||||||    
T  8238587 gacaatgcataatatatgcaaggtctggggttcaaac 8238623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 20400100 - 20400140
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| |||||||||||||||||| | |||||||||||||    
T  20400100 gacaatacataatatatgcaaggtctgaggttcaaacccca 20400140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 20906506 - 20906478
Alignment:
Q  170 tatatgcaaggtccggggttcaaacccca 198  Q
    |||||||||||||||||||||||||||||    
T  20906506 tatatgcaaggtccggggttcaaacccca 20906478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 24475418 - 24475454
Alignment:
Q  87 tattcaaaaatagtaagagttatttcaaactcgtttt 123  Q
    |||||||||||||||  ||||||||||||||||||||    
T  24475418 tattcaaaaatagtagaagttatttcaaactcgtttt 24475454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 27065770 - 27065730
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||| ||||||||||||| ||||||||||||||    
T  27065770 gacaatgcataaaatatgcaaggtccagggttcaaacccca 27065730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 28266739 - 28266771
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttc 190  Q
    |||||| ||||||||||||||||||||||||||    
T  28266739 gacaatgcataatatatgcaaggtccggggttc 28266771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 33745122 - 33745162
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||| |||||||||||| |||||||||||||||    
T  33745122 gacaatgcataaaatatgcaaggtctggggttcaaacccca 33745162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 35191855 - 35191815
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| |||||||||||||||||| ||||||| |||||||    
T  35191855 gacaatgcataatatatgcaaggtctggggttcgaacccca 35191815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 41990621 - 41990581
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccccaa 199  Q
    ||||| |||||||||||||||||||| ||||| ||||||||    
T  41990621 acaatacataatatatgcaaggtccgaggttcgaaccccaa 41990581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 48315055 - 48315027
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaa 193  Q
    |||||||||||||||||||||||||||||    
T  48315055 cataatatatgcaaggtccggggttcaaa 48315027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 197
Target Start/End: Complemental strand, 49082736 - 49082708
Alignment:
Q  169 atatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||||||||||||||    
T  49082736 atatatgcaaggtccggggttcaaacccc 49082708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 49975843 - 49975807
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| |||||||||||||||||| |||||||||||    
T  49975843 gacaatgcataatatatgcaaggtctggggttcaaac 49975807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 55126029 - 55126069
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||||||||||||||| || |||||||||||||    
T  55126029 gacaatacataatatatgcaaggttcgaggttcaaacccca 55126069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 20721073 - 20721120
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactacca 205  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  20721073 gacaatacataatatatgcaaggtccggggttcaaaccccgactacca 20721120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 13864368 - 13864415
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||| ||||||||||||||||||||||||||||||||| || |||||    
T  13864368 acaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 13864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 22522839 - 22522800
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  22522839 gacaatgcataatatatgcaaggtccggggttcaaacccc 22522800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 40715987 - 40715948
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  40715987 gacaatgcataatatatgcaaggtccggggttcaaacccc 40715948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 6424946 - 6424901
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||| |||||| |||||||||| |||||||||||||||||||||||    
T  6424946 gtagggacaatgcataatatatacaaggtccggggttcaaacccca 6424901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 6489007 - 6489069
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||    || |||||| |||||||||||||||||| ||||||||||||||    
T  6489007 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaacccc 6489069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 32200508 - 32200446
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||    || |||||| |||||||||||||||||||||||||||| ||||    
T  32200508 gtgagcttagctcagttgacagggacaatgcataatatatgcaaggtccggggttcaagcccc 32200446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 34436851 - 34436913
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||    || |||||| |||||||||||||||| ||||||||||||||||    
T  34436851 gtgagcttagctcagttggtagggacaatgcataatatatgcaagggccggggttcaaacccc 34436913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 10531563 - 10531611
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||||||||||| |||||| |||||||||||| ||||||||    
T  10531563 gacaatgcataatatatgcacggtccgtggttcaaaccccgactaccac 10531611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 42473918 - 42473954
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacc 195  Q
    ||||| |||||||||||||||||||||||||||||||    
T  42473918 acaatgcataatatatgcaaggtccggggttcaaacc 42473954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 6624799 - 6624838
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  6624799 gacaatgcataatatatgcaaggtccggggttcgaacccc 6624838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 34191456 - 34191495
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  34191456 gacaatgcataaaatatgcaaggtccggggttcaaacccc 34191495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 118
Target Start/End: Complemental strand, 36977711 - 36977676
Alignment:
Q  83 aatttattcaaaaatagtaagagttatttcaaactc 118  Q
    |||||||||||||||||||| |||||||||||||||    
T  36977711 aatttattcaaaaatagtaaaagttatttcaaactc 36977676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 15889411 - 15889482
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||||||    || |||||| ||||||||||||||||||  ||||||||||||| || |||||    
T  15889411 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctagggttcaaaccccgaccaccac 15889482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 16701642 - 16701571
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||||||    || ||||||  ||||||||||||||||||||| |||||||||| || |||||    
T  16701642 gtgagcttagctcagttggtagggacaatgaataatatatgcaaggtccgggattcaaaccccgaccaccac 16701571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 37932353 - 37932391
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  37932353 gacaatgcataatatatgcaaggtccggggttcgaaccc 37932391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 4763224 - 4763187
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  4763224 gacaatgcataatatatgtaaggtccggggttcaaacc 4763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 16579411 - 16579374
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  16579411 acaatgcataatatatgcaaggtccgtggttcaaaccc 16579374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 18589904 - 18589867
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  18589904 acaatgcataatatatgcaaggtccggggtttaaaccc 18589867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 18789054 - 18789099
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||| |||||| ||||| ||||||||||| ||||||||||||||||    
T  18789054 gtagagacaatgcataaaatatgcaaggttcggggttcaaacccca 18789099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 25979867 - 25979904
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  25979867 gacaatgcataatgtatgcaaggtccggggttcaaacc 25979904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 42817150 - 42817113
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  42817150 gacaatgcataatatatacaaggtccggggttcaaacc 42817113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 10704369 - 10704333
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  10704369 gacaatgcataaaatatgcaaggtccggggttcaaac 10704333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 11720912 - 11720955
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||| |||||| ||||||||||||||||| |||||||||||||||    
T  11720912 gtagggacaatgcataatatatgcaaggt-cggggttcaaacccc 11720955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 14474864 - 14474896
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||||| |||||||||||||    
T  14474864 cataatatatgcaaggtccagggttcaaacccc 14474896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 20688063 - 20688099
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  20688063 gacaatgcataatatatgcaaggtccggagttcaaac 20688099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 193
Target Start/End: Complemental strand, 21139179 - 21139151
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaa 193  Q
    |||||||||||||||||||||||||||||    
T  21139179 cataatatatgcaaggtccggggttcaaa 21139151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 24408525 - 24408557
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||| ||||||||||||||    
T  24408525 cataatatatgcaaggtctggggttcaaacccc 24408557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 27086109 - 27086141
Alignment:
Q  166 ataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||||||||||||||| ||||||||||||||    
T  27086109 ataatatatgcaaggtccagggttcaaacccca 27086141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 31877951 - 31877991
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||||||||||||| || |||||||||||||||    
T  31877951 gacaatgcataatatatgcaagatcaggggttcaaacccca 31877991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 33928662 - 33928698
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  33928662 gacaatgcataatatatgcaaggtccggggtttaaac 33928698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 20085797 - 20085756
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaa 199  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  20085797 gacaatgcataatatatgcaaggtccggggttcaaaccccaa 20085756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 11909035 - 11908980
Alignment:
Q  139 gtgagcttagctcagtagcgacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||||||||||||| | |||||| |||||||||||||||||| || ||||||||    
T  11909035 gtgagcttagctcagttgggacaatgcataatatatgcaaggtctggtgttcaaac 11908980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 18714471 - 18714510
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  18714471 gacaatgcataatatatgcaaggtccggggttcaaacccc 18714510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 19599168 - 19599207
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  19599168 gacaatgcataatatatgcaaggtccggggttcaaacccc 19599207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 27462474 - 27462435
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  27462474 gacaatgcataatatatgcaaggtccggggttcaaacccc 27462435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 10244750 - 10244788
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  10244750 gacaatgcataatatatgcaaggtccggggttcaaaccc 10244788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 3830086 - 3830131
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||    
T  3830086 gtagggacaatgcataatatatgcaaggtccagggttcaaacccca 3830131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 5579691 - 5579764
Alignment:
Q  137 ttgtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||||||||    || |||| | |||||||||||||||||| |||||||||||||| || |||||    
T  5579691 ttgtgagcttagctcagttggtagggacagtgcataatatatgcaaggtctggggttcaaaccccgaccaccac 5579764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 7670458 - 7670494
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacc 195  Q
    ||||| |||||||||||||||||||||||||||||||    
T  7670458 acaatgcataatatatgcaaggtccggggttcaaacc 7670494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 19626563 - 19626527
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||||||||||||||||    
T  19626563 gacaatgcataatatatgcaaggtccggggttcaaac 19626527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 27833439 - 27833391
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||||||||| ||||||||||||||||||||| || |||||    
T  27833439 gacaatgcataatatatgtaaggtccggggttcaaaccccgaccaccac 27833391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 28736671 - 28736623
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||| |||||||||||||||| ||||||||||||||| |||||    
T  28736671 gacaatgcatgatatatgcaaggtccgaggttcaaaccccaaccaccac 28736623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 46737808 - 46737844
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||||||||||||||||    
T  46737808 gacaatgcataatatatgcaaggtccggggttcaaac 46737844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 145550 - 145589
Alignment:
Q  167 taatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  145550 taatatatgcaaggtccggggttcaaaccccgaccaccac 145589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 12167431 - 12167478
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||| |||||||||| ||||||||||| ||||||||||||| |||||    
T  12167431 acaatgcataatatattcaaggtccgggattcaaaccccaaccaccac 12167478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 19416537 - 19416576
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  19416537 gacaatgcataaaatatgcaaggtccggggttcaaacccc 19416576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 197
Target Start/End: Original strand, 23147321 - 23147352
Alignment:
Q  166 ataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||||||||||||||||||    
T  23147321 ataatatatgcaaggtccggggttcaaacccc 23147352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 194
Target Start/End: Complemental strand, 39280855 - 39280820
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaac 194  Q
    ||||| ||||||||||||||||||||||||||||||    
T  39280855 acaatgcataatatatgcaaggtccggggttcaaac 39280820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 46987109 - 46987148
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  46987109 gacaatgcataatatatgcaaggtccggggttcgaacccc 46987148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 48629103 - 48629064
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||||||||||||||||||||||| |||||||    
T  48629103 gacaatgcataatatatgcaaggtccggggtttaaacccc 48629064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 16577903 - 16577861
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||| |||||| |||||||||||||||||| ||||||||||||    
T  16577903 gtagggacaatacataatatatgcaaggtctggggttcaaacc 16577861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 16587759 - 16587801
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||| |||||| |||||||||||||||||| ||||||||||||    
T  16587759 gtagggacaatacataatatatgcaaggtctggggttcaaacc 16587801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Complemental strand, 42095974 - 42095944
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacc 195  Q
    |||||||||||||||||||||||||||||||    
T  42095974 cataatatatgcaaggtccggggttcaaacc 42095944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 43539167 - 43539104
Alignment:
Q  137 ttgtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    ||||||||||||||||||    ||  ||||| ||||||||||| ||||||||||||||||||||    
T  43539167 ttgtgagcttagctcagttgataggaacaatgcataatatatgtaaggtccggggttcaaaccc 43539104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 18023697 - 18023738
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||| |||||| ||||||||||||||||||| ||||||||||    
T  18023697 gtagggacaatgcataatatatgcaaggtccagggttcaaac 18023738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 25602941 - 25602982
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccccaac 200  Q
    ||||| |||||||||||||||| |||||||| ||||||||||    
T  25602941 acaatgcataatatatgcaaggcccggggttgaaaccccaac 25602982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 194
Target Start/End: Complemental strand, 42753558 - 42753529
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaac 194  Q
    ||||||||||||||||||||||||||||||    
T  42753558 cataatatatgcaaggtccggggttcaaac 42753529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 194
Target Start/End: Complemental strand, 45046246 - 45046217
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaac 194  Q
    ||||||||||||||||||||||||||||||    
T  45046246 cataatatatgcaaggtccggggttcaaac 45046217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 47155148 - 47155103
Alignment:
Q  152 agtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| |||||| ||||||||||||||||||| |||||| ||||||    
T  47155148 agtagggacaatgcataatatatgcaaggtccagggttcgaacccc 47155103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 2618702 - 2618734
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttc 190  Q
    |||||| ||||||||||||||||||||||||||    
T  2618702 gacaatgcataatatatgcaaggtccggggttc 2618734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 5041362 - 5041398
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| |||||||||||||||||| |||||||||||    
T  5041362 gacaatgcataatatatgcaaggtctggggttcaaac 5041398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 9157546 - 9157582
Alignment:
Q  82 gaatttattcaaaaatagtaagagttatttcaaactc 118  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  9157546 gaatttactcaaaaatagtaaaagttatttcaaactc 9157582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 10242510 - 10242542
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||||| |||||||||||||    
T  10242510 cataatatatgcaaggtccagggttcaaacccc 10242542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 18773794 - 18773746
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||| ||||| ||||||||||||||||||||| || |||||    
T  18773794 gacaatgcataaaatatgtaaggtccggggttcaaaccccgaccaccac 18773746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 35222947 - 35222987
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||| |||||||||||||| |||||||||||||||    
T  35222947 gacaatgcatgatatatgcaaggtctggggttcaaacccca 35222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 36121682 - 36121714
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| |||||||||||||||||||||||||||    
T  36121682 cataaaatatgcaaggtccggggttcaaacccc 36121714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 39801729 - 39801777
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||||||||||||| |||||||| | ||||||||| |||||    
T  39801729 gacaatgcataatatatgcaagatccggggtacgaaccccaaccaccac 39801777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 40867053 - 40867089
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| |||| |||||||||||||||||||||||||    
T  40867053 gacaatgcatagtatatgcaaggtccggggttcaaac 40867089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 42829272 - 42829236
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  42829272 gacaatgcataatatatgcaagctccggggttcaaac 42829236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 47342472 - 47342436
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  47342472 gacaatgcataatatatgcaaggtccggagttcaaac 47342436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 48065225 - 48065260
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||||||||||||||||||||| ||||||||||||    
T  48065225 gacaattcataatatatgcaaggt-cggggttcaaac 48065260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 39252185 - 39252136
Alignment:
Q  157 cgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| |||||    
T  39252185 cgacaatacataatatatgcaaggtccggggttcaaactccaaccaccac 39252136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 8269406 - 8269358
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||||||||||||||||||||||||||||||| || |||||    
T  8269406 gacaatacataatatatgcaaggtccggggttcaaaccccgaccaccac 8269358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 28016228 - 28016180
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  28016228 gacaatacataaaatatgcaagatccggggttcaaaccccaactaccac 28016180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 25532996 - 25533035
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  25532996 gacaatgcataatatatgcaaggtccggggttcaaacccc 25533035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 12269021 - 12268983
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  12269021 acaatgcataatatatgcaaggtccggggttcaaacccc 12268983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 17139578 - 17139507
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||||||    || |||||| |||||||||| |||||||||||||||||||||| || |||||    
T  17139578 gtgagcttagctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgaccaccac 17139507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 198
Target Start/End: Complemental strand, 3937553 - 3937520
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccca 198  Q
    ||||||||||||||||||||||||||||||||||    
T  3937553 cataatatatgcaaggtccggggttcaaacccca 3937520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 27533261 - 27533314
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||| || |||||    
T  27533261 gtagggacaatgcataatatatgcaaggttcggggttcaaaccccgaccaccac 27533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 34521228 - 34521191
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||||||||||||||||||||||||||||    
T  34521228 gacaatgcataatatatgcaaggtccggggttcaaacc 34521191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 41973273 - 41973317
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||| |||||| |||||||||||||||||||||||||| ||||||    
T  41973273 gtagggacaatgcataatatatgcaaggtccggggttcgaacccc 41973317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 197
Target Start/End: Original strand, 2994789 - 2994820
Alignment:
Q  166 ataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||||||||||||||||||    
T  2994789 ataatatatgcaaggtccggggttcaaacccc 2994820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 5907822 - 5907861
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  5907822 gacaatgcataatatatgcaaggtccagggttcaaacccc 5907861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 6000181 - 6000142
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  6000181 gacaatgcataatatatgcaaggtccgaggttcaaacccc 6000142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 8736458 - 8736497
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  8736458 gacaatgcataaaatatgcaaggtccggggttcaaacccc 8736497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 12880590 - 12880551
Alignment:
Q  83 aatttattcaaaaatagtaagagttatttcaaactcgttt 122  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  12880590 aatttactcaaaaatagtaaaagttatttcaaactcgttt 12880551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 15668522 - 15668561
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  15668522 acaatgcataaaatatgcaaggtccggggttcaaacccca 15668561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 18166625 - 18166664
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||| ||||||||||||||||||    
T  18166625 gacaatgcataatatatgcaaagtccggggttcaaacccc 18166664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 193
Target Start/End: Original strand, 19620599 - 19620634
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaa 193  Q
    |||||| |||||||||||||||||||||||||||||    
T  19620599 gacaatacataatatatgcaaggtccggggttcaaa 19620634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 26803489 - 26803450
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||| ||||||||||||||||||    
T  26803489 gacaatgcataatatatgcaaagtccggggttcaaacccc 26803450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 10654485 - 10654447
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  10654485 gacaatgcataatatatgcaaggtccgtggttcaaaccc 10654447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 11681247 - 11681285
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  11681247 acaatgcataatatatgcaaggtctggggttcaaacccc 11681285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 197
Target Start/End: Complemental strand, 19795145 - 19795115
Alignment:
Q  167 taatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||||||||||||||||    
T  19795145 taatatatgcaaggtccggggttcaaacccc 19795115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 33020104 - 33020041
Alignment:
Q  139 gtgagcttagctca----gtagcgacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    ||||||||||||||    |||| |||||| |||||||||||||||||| | |||||||||||||    
T  33020104 gtgagcttagctcaactggtagggacaatgcataatatatgcaaggtctgaggttcaaacccca 33020041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Original strand, 34595902 - 34595932
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacc 195  Q
    |||||||||||||||||||||||||||||||    
T  34595902 cataatatatgcaaggtccggggttcaaacc 34595932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 39252318 - 39252247
Alignment:
Q  139 gtgagcttagctcagtag----cgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||||||||||||| |    ||||||| ||||||||||| ||||||| |||||||||| ||||| |||||    
T  39252318 gtgagcttagctcagttgatatcgacaatacataatatatgtaaggtccagggttcaaactccaaccaccac 39252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 1605419 - 1605456
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  1605419 gacaatgcataaaatatgcaaggtccggggttcaaacc 1605456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 1794619 - 1794656
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  1794619 gacaatgcataatatatgcaagatccggggttcaaacc 1794656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 4968653 - 4968620
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttca 191  Q
    |||||| |||||||||||||||||||||||||||    
T  4968653 gacaatgcataatatatgcaaggtccggggttca 4968620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 9005697 - 9005750
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||| |||||| ||||||||||| ||||||  |||||||||||||||| |||||    
T  9005697 gtagggacaatacataatatatggaaggtcatgggttcaaaccccaaccaccac 9005750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 26755639 - 26755676
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  26755639 gacaatgcattatatatgcaaggtccggggttcaaacc 26755676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 29739360 - 29739397
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  29739360 gacaatgcataaaatatgcaaggtccggggttcaaacc 29739397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 197
Target Start/End: Complemental strand, 41763216 - 41763154
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||    || || ||| ||||| |||||||||||||||||||||||||||    
T  41763216 gtgagcttagctcagttggtagggataatgcataaaatatgcaaggtccggggttcaaacccc 41763154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 3481591 - 3481623
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||| ||||||||||||||    
T  3481591 cataatatatgcaaggtctggggttcaaacccc 3481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 197
Target Start/End: Complemental strand, 6423788 - 6423760
Alignment:
Q  169 atatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||||||||||||||    
T  6423788 atatatgcaaggtccggggttcaaacccc 6423760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 9929269 - 9929229
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||||||||||||||||| ||||| ||||||||    
T  9929269 gacaatgcataatatatgcaaggtccagggttaaaacccca 9929229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 11462960 - 11462920
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||| |||||||||||||||||||| |||||||    
T  11462960 gacaatgcataaaatatgcaaggtccggggttcgaacccca 11462920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 12212325 - 12212357
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||| ||||||||||||||||||    
T  12212325 cataatatatgcaacgtccggggttcaaacccc 12212357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 13401594 - 13401659
Alignment:
Q  136 tttgtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||| |||||    || |||||| ||||||||||| ||||| |||||||||||||||    
T  13401594 tttgtgagcttagttcagttgatagagacaatgcataatatatgtaaggttcggggttcaaacccc 13401659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 16033488 - 16033452
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| |||||||||||||||||| |||||||||||    
T  16033488 gacaatgcataatatatgcaaggtctggggttcaaac 16033452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 16307672 - 16307720
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| |||||||||||||||||| |||| ||||||||| || |||||    
T  16307672 gacaatgcataatatatgcaaggtctggggatcaaaccccgaccaccac 16307720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 18186711 - 18186747
Alignment:
Q  169 atatatgcaaggtccggggttcaaaccccaactacca 205  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  18186711 atatatgcaaggttcggggttcaaaccccaaccacca 18186747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 29234012 - 29233964
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||| |||||||||||| ||||||| ||||||||| |||||    
T  29234012 gacaatgcataaaatatgcaaggtctggggttcgaaccccaaccaccac 29233964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 29987150 - 29987102
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| |||||||||||||||||| || |||| ||||||||| |||||    
T  29987150 gacaatgcataatatatgcaaggtctggagttcgaaccccaaccaccac 29987102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 32950798 - 32950762
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacc 195  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  32950798 acaatgcataatatatgcaaggtccggagttcaaacc 32950762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 33153923 - 33153879
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||| |||||| ||||||||||| |||||||| ||||||||||||    
T  33153923 gtagggacaatgcataatatatgtaaggtccgaggttcaaacccc 33153879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 34848499 - 34848535
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    ||||||||||||||||||||||||| | |||||||||    
T  34848499 gacaattcataatatatgcaaggtctgaggttcaaac 34848535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 36679621 - 36679649
Alignment:
Q  166 ataatatatgcaaggtccggggttcaaac 194  Q
    |||||||||||||||||||||||||||||    
T  36679621 ataatatatgcaaggtccggggttcaaac 36679649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 38448904 - 38448872
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttc 190  Q
    |||||| ||||||||||||||||||||||||||    
T  38448904 gacaatgcataatatatgcaaggtccggggttc 38448872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 40613046 - 40613078
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttc 190  Q
    |||||| ||||||||||||||||||||||||||    
T  40613046 gacaatgcataatatatgcaaggtccggggttc 40613078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 45003431 - 45003459
Alignment:
Q  166 ataatatatgcaaggtccggggttcaaac 194  Q
    |||||||||||||||||||||||||||||    
T  45003431 ataatatatgcaaggtccggggttcaaac 45003459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 45481516 - 45481548
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttc 190  Q
    |||||| ||||||||||||||||||||||||||    
T  45481516 gacaatgcataatatatgcaaggtccggggttc 45481548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 46707895 - 46707931
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  46707895 gacaatgcataatatatgcaagttccggggttcaaac 46707931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 49432024 - 49431992
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||| |||||||||||||||||||||    
T  49432024 cataatatatgtaaggtccggggttcaaacccc 49431992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 675941 - 675981
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  675941 gacaatgcataatatatgcaaggtccggggttcaaacccca 675981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 11949801 - 11949753
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||||||||||||||||||||||||||||||| || |||||    
T  11949801 gacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 11949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 20383511 - 20383551
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  20383511 gacaatgcataatatatgcaaggtccggggttcaaacccca 20383551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 20799455 - 20799394
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    ||||||||||||||||    || |||||| ||||||||||||||||||||||||||||||||    
T  20799455 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccc 20799394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 49042019 - 49041980
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  49042019 gacaatgcataatatatgcaaggtccggggttcaaacccc 49041980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 19479514 - 19479476
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  19479514 acaatgcataatatatgcaaggtccggggttcaaacccc 19479476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 21317399 - 21317328
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||||||    || |||||| |||||||||||||||||| |||||||||||| |||| |||||    
T  21317399 gtgagcttagctcagttggtagagacaatgcataatatatgcaaggtcaggggttcaaacctcaaccaccac 21317328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 7230303 - 7230340
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||||||||||||||||||||||||||||    
T  7230303 gacaatgcataatatatgcaaggtccggggttcaaacc 7230340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 17423220 - 17423179
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||| |||||| ||||||||||||||||||||||||||||||    
T  17423220 gtagagacaatgcataatatatgcaaggtccggggttcaaac 17423179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 23775536 - 23775589
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||| |||||| ||||||||||||||||||| |||||| ||||||||| |||||    
T  23775536 gtagggacaatgcataatatatgcaaggtccagggttcgaaccccaaccaccac 23775589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 25783492 - 25783451
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||| |||||| ||||||||||||||||||||||||||||||    
T  25783492 gtagggacaatgcataatatatgcaaggtccggggttcaaac 25783451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 9946450 - 9946498
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||| ||||||||||||||||||||||||||| || |||||    
T  9946450 gacaatgcataaaatatgcaaggtccggggttcaaaccccgaccaccac 9946498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 11198358 - 11198390
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||||||||||||||||||    
T  11198358 cataatatatgcaaggtccggggttcaaacccc 11198390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 21114343 - 21114295
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||| ||||||||||||||||||||||||||||| || |||||    
T  21114343 gacaatgcatgatatatgcaaggtccggggttcaaaccccgaccaccac 21114295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 28435286 - 28435246
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  28435286 gacaatgcataatatatgcaaggttcggggttcaaacccca 28435246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 37921769 - 37921817
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| |||||||||||||||||||||| ||||||||||  |||||||    
T  37921769 gacaatgcataatatatgcaaggtccgggattcaaaccccggctaccac 37921817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 44815971 - 44816003
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||||||||||||||||||    
T  44815971 cataatatatgcaaggtccggggttcaaacccc 44816003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 47814282 - 47814250
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||||||||||||||||||    
T  47814282 cataatatatgcaaggtccggggttcaaacccc 47814250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 49473668 - 49473708
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| |||||||||||||||||||||||||| |||||||    
T  49473668 gacaatgcataatatatgcaaggtccggggttcgaacccca 49473708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 49953441 - 49953405
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||||||||||||||||    
T  49953441 gacaatgcataatatatgcaaggtccggggttcaaac 49953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 54294453 - 54294421
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||||||||||||||||||    
T  54294453 cataatatatgcaaggtccggggttcaaacccc 54294421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 5924649 - 5924709
Alignment:
Q  139 gtgagcttagctcagtagc----gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||||||||||||| ||    |||||| ||||||||||| |||||||||||||||||||    
T  5924649 gtgagcttagctcagttgctatggacaatacataatatatggaaggtccggggttcaaacc 5924709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 7371586 - 7371547
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  7371586 gacaatacataatatatgcaaggtccggggttcgaacccc 7371547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 200
Target Start/End: Original strand, 16737093 - 16737136
Alignment:
Q  157 cgacaattcataatatatgcaaggtccggggttcaaaccccaac 200  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||    
T  16737093 cgacaatgcataatatatgcaaggtcgggggttcaaatcccaac 16737136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 50362200 - 50362140
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    ||||||||||||||||    || |||||| ||||||||||||||||||| |||||||||||    
T  50362200 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccagggttcaaacc 50362140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 56551630 - 56551591
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  56551630 gacaatgcataatatatgcaaggtccgaggttcaaacccc 56551591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 3936651 - 3936689
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  3936651 acaatgcataatatatgcaaggtccggggttcgaacccc 3936689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 22040673 - 22040711
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  22040673 gacaatgcataatatatgcaaggttcggggttcaaaccc 22040711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 43722788 - 43722826
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  43722788 gacaatgcataatatatgtaaggtccggggttcaaaccc 43722826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 54500569 - 54500628
Alignment:
Q  139 gtgagcttagctcagt----agcgacaattcataatatatgcaaggtccggggttcaaac 194  Q
    ||||||||||||||||    || |||||| ||||||||||| ||||||||||||||||||    
T  54500569 gtgagcttagctcagttggtagagacaatgcataatatatgtaaggtccggggttcaaac 54500628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 54857652 - 54857614
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  54857652 acaatgcataaaatatgcaaggtccggggttcaaacccc 54857614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 281614 - 281651
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  281614 gacaatgcataatatatgaaaggtccggggttcaaacc 281651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 6087777 - 6087810
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||||||||||||||| |||||||||||||||    
T  6087777 cataatatatgcaaggtctggggttcaaacccca 6087810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 12322696 - 12322733
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  12322696 gacaatgcataatatatgcaagttccggggttcaaacc 12322733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 16304136 - 16304099
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  16304136 gacaatgcataatatatgcaaggtccgggattcaaacc 16304099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 17729456 - 17729497
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||||||||||||||| |||||||||||||| || |||||    
T  17729456 cataatatatgcaaggtctggggttcaaaccccgaccaccac 17729497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 18094435 - 18094476
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||||||||| |||||||||||| ||| |||||    
T  18094435 cataatatatgcaaggtccagggttcaaaccctaaccaccac 18094476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 21318296 - 21318243
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||| |||||| ||||||||||||||||||  ||||||||||||| || |||||    
T  21318296 gtagggacaatgcataatatatgcaaggtctagggttcaaaccccgaccaccac 21318243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 23225889 - 23225926
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  23225889 acaattcataatatatgcaagattcggggttcaaaccc 23225926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 24665022 - 24664981
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||||||||||||||||||||||| |||||| || |||||    
T  24665022 cataatatatgcaaggtccggggttcgaaccccgaccaccac 24664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 29908079 - 29908116
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  29908079 gacaatgcataatatatgcaaggtccggagttcaaacc 29908116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 48694681 - 48694640
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||||||||||||||||| | |||||||||||| |||||||    
T  48694681 cataatatatgcaaggtccagagttcaaaccccagctaccac 48694640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 50668364 - 50668405
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccccaac 200  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||    
T  50668364 acaatacataatatatgtaaggttcggggttcaaaccccaac 50668405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 8607150 - 8607198
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| |||||| |||| ||||||||| ||||||||||| ||||||||    
T  8607150 gacaatgcataatgtatgtaaggtccggagttcaaaccccgactaccac 8607198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 10035295 - 10035327
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||| ||||||||||||||    
T  10035295 cataatatatgcaaggtctggggttcaaacccc 10035327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 14197474 - 14197422
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaaccccaactacca 205  Q
    |||| |||||| ||||||||||| ||| ||||||||||||||| |||| ||||    
T  14197474 gtagggacaatgcataatatatgtaagatccggggttcaaacctcaaccacca 14197422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 14202510 - 14202478
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||| |||||||||||||||||||||    
T  14202510 cataatatatgtaaggtccggggttcaaacccc 14202478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 19314197 - 19314229
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||||||||| |||||||||    
T  19314197 cataatatatgcaaggtccggggctcaaacccc 19314229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 19908715 - 19908763
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| |||||||||||||||||||| ||||| |||||| || |||||    
T  19908715 gacaatgcataatatatgcaaggtccgaggttcgaaccccgaccaccac 19908763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 22630403 - 22630359
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||| |||||| |||||||||||||||||| | ||||||||||||    
T  22630403 gtagtgacaatgcataatatatgcaaggtctgaggttcaaacccc 22630359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 24079878 - 24079830
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||| ||||||||||||||| ||||||||||| || |||||    
T  24079878 gacaatgcataaaatatgcaaggtccggagttcaaaccccgaccaccac 24079830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 34834044 - 34834012
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttc 190  Q
    |||||| ||||||||||||||||||||||||||    
T  34834044 gacaatgcataatatatgcaaggtccggggttc 34834012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 37193280 - 37193308
Alignment:
Q  166 ataatatatgcaaggtccggggttcaaac 194  Q
    |||||||||||||||||||||||||||||    
T  37193280 ataatatatgcaaggtccggggttcaaac 37193308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 38374975 - 38375019
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||| |||||| |||||||||||||||||| || |||||||||||    
T  38374975 gtagggacaatgcataatatatgcaaggtctggagttcaaacccc 38375019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 38453288 - 38453328
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||||||||||||||||| |||||| |||||||    
T  38453288 gacaatgcataatatatgcaaggtccagggttcgaacccca 38453328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 42845048 - 42845084
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  42845048 gacaatgcataatatatgcaaggtccggggttaaaac 42845084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Complemental strand, 46676536 - 46676504
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttc 190  Q
    |||||| ||||||||||||||||||||||||||    
T  46676536 gacaatgcataatatatgcaaggtccggggttc 46676504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 49952607 - 49952571
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  49952607 gacaatgcataatatatgtaaggtccggggttcaaac 49952571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 50152269 - 50152237
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||||||||||||||| |||||||||||||||    
T  50152269 cataatatatgcaaggttcggggttcaaacccc 50152237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1127 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 1202 - 1163
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  1202 acaatgcataatatatgcaaggtccggggttcaaacccca 1163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 655812 - 655748
Alignment:
Q  137 ttgtgagcttagctcagtag----cgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||| |    ||||||| |||||||||||||||||||||||||| ||||||    
T  655812 ttgtgagcttagctcagttggtatcgacaatgcataatatatgcaaggtccggggttcgaacccc 655748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 8569732 - 8569771
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  8569732 gacaatgcataatatatgcaaggtccggggttcaaacccc 8569771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 24373753 - 24373708
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||| |||||| |||||||||||||||||| |||||||||||||||    
T  24373753 gtagagacaatgcataatatatgcaaggtcaggggttcaaacccca 24373708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 33824904 - 33824941
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| |||||||||||||||||||||||||||||||    
T  33824904 gacaatgcataatatatgcaaggtccggggttcaaacc 33824941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 291397 - 291429
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||||||||||||||||||||||||||||||    
T  291397 cataatatatgcaaggtccggggttcaaacccc 291429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 32524463 - 32524411
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaaccccaactacca 205  Q
    |||| |||||| |||||||||||||| |||| |||||||||||||||| ||||    
T  32524463 gtagggacaatgcataatatatgcaaagtccagggttcaaaccccaaccacca 32524411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 2726455 - 2726416
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||||||||||| ||||||    
T  2726455 gacaatgcataatatatgcaaggtccggggttcgaacccc 2726416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 8637480 - 8637437
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||| |||||| |||||||||||||||||||| |||||||||||    
T  8637480 gtagggacaatgcataatatatgcaaggtccgaggttcaaaccc 8637437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 15187087 - 15187134
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||| |||||||||||||||||||| |||||||||||| || |||||    
T  15187087 acaatgcataatatatgcaaggtccgaggttcaaaccccgaccaccac 15187134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 15473519 - 15473472
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    ||||| |||||||||||||||||||| |||||||||||| || |||||    
T  15473519 acaatgcataatatatgcaaggtccgaggttcaaaccccgaccaccac 15473472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 18253376 - 18253337
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  18253376 acaatgcataatatatgcaaggtccagggttcaaacccca 18253337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 20744161 - 20744200
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  20744161 gacaatgcataatatatgcaaggtctggggttcaaacccc 20744200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 29740505 - 29740544
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  29740505 gacaatgcataatatacgcaaggtccggggttcaaacccc 29740544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 33976267 - 33976306
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  33976267 gacaatgcataaaatatgcaaggtccggggttcaaacccc 33976306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 2546209 - 2546251
Alignment:
Q  164 tcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||||||||||||||| ||||||||||||||| || |||||    
T  2546209 tcataatatatgcaaggtacggggttcaaaccccgaccaccac 2546251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 9111071 - 9111109
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  9111071 acaatgcataatatatgcaaggtccggggttcgaacccc 9111109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 193
Target Start/End: Original strand, 12215777 - 12215811
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaa 193  Q
    ||||| |||||||||||||||||||||||||||||    
T  12215777 acaatgcataatatatgcaaggtccggggttcaaa 12215811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 13496140 - 13496178
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  13496140 acaatgcataatatatgcaaggtccggagttcaaacccc 13496178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 16390447 - 16390489
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||| |||||| ||||||||||| |||||||||||||||||||    
T  16390447 gtagggacaatgcataatatatgtaaggtccggggttcaaacc 16390489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Original strand, 17151254 - 17151296
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||| |||||| |||||||||||||||||| ||||||||||||    
T  17151254 gtagtgacaatacataatatatgcaaggtctggggttcaaacc 17151296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 31971552 - 31971590
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccc 196  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  31971552 gacaatgcataatatatgcaaggtccgaggttcaaaccc 31971590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 34481451 - 34481413
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  34481451 acaatgcattatatatgcaaggtccggggttcaaacccc 34481413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 4455627 - 4455586
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||||||||||||||| |||||||||||||| || |||||    
T  4455627 cataatatatgcaaggtctggggttcaaaccccgaccaccac 4455586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 8629734 - 8629697
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacc 195  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  8629734 gacaatgcataatatatgcaaggttcggggttcaaacc 8629697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 28231463 - 28231430
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttca 191  Q
    |||||| |||||||||||||||||||||||||||    
T  28231463 gacaatgcataatatatgcaaggtccggggttca 28231430  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 788889 - 788937
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||||||||||||||| ||| ||||||||||| || |||||    
T  788889 gacaatgcataatatatgcaaggttcggagttcaaaccccgaccaccac 788937  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 3808156 - 3808116
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| |||||||||||||||||||| | |||||||||||    
T  3808156 gacaatgcataatatatgcaaggtccgagattcaaacccca 3808116  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 4450285 - 4450317
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttc 190  Q
    |||||| ||||||||||||||||||||||||||    
T  4450285 gacaatgcataatatatgcaaggtccggggttc 4450317  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 8916517 - 8916477
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaa 193  Q
    |||| |||||| ||||||||||||||||||||| |||||||    
T  8916517 gtagggacaatacataatatatgcaaggtccggagttcaaa 8916477  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 9392699 - 9392659
Alignment:
Q  165 cataatatatgcaaggtccggggttcaaaccccaactacca 205  Q
    |||||||||||||||||||| |||| ||||||| |||||||    
T  9392699 cataatatatgcaaggtccgaggtttaaaccccgactacca 9392659  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 12591065 - 12591017
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||||||||||||||| |||| || |||||||||| |||||    
T  12591065 gacaatgcataatatatgcaaggttcgggatttaaaccccaaccaccac 12591017  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 12808893 - 12808933
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaaccccaa 199  Q
    ||||| |||||||||||||||||| ||||||| ||||||||    
T  12808893 acaatgcataatatatgcaaggtctggggttcgaaccccaa 12808933  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 14918343 - 14918299
Alignment:
Q  153 gtagcgacaattcataatatatgcaaggtccggggttcaaacccc 197  Q
    |||| |||||| |||||||||| ||||||| ||||||||||||||    
T  14918343 gtagggacaatgcataatatatacaaggtctggggttcaaacccc 14918299  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 15155759 - 15155795
Alignment:
Q  159 acaattcataatatatgcaaggtccggggttcaaacc 195  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  15155759 acaatgcataatatatgcaaggtctggggttcaaacc 15155795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 16204828 - 16204780
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| |||||| |||||||||||||||||||||| ||| || |||||    
T  16204828 gacaatgcataatgtatgcaaggtccggggttcaaatcccgaccaccac 16204780  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 19265562 - 19265526
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  19265562 gacaatgcataaaatatgcaaggtccggggttcaaac 19265526  T

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Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 24623355 - 24623307
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||||||||| ||||| ||||||||||||||| || |||||    
T  24623355 gacaatgcataatatatgtaaggttcggggttcaaaccccgaccaccac 24623307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 26356119 - 26356083
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  26356119 gacaatgcataatatatgcaaggttcggggttcaaac 26356083  T

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Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Original strand, 26548282 - 26548314
Alignment:
Q  166 ataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||||||||||||| ||||||||||||||||    
T  26548282 ataatatatgcaaggttcggggttcaaacccca 26548314  T

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Target: scaffold1619 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1619
Description:

Target: scaffold1619; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 1054 - 1094
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| |||||||||||||||||||||| |||||||||||    
T  1054 gacaatgcataatatatgcaaggtccgggattcaaacccca 1094  T

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Target: scaffold0334 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 5205 - 5253
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| |||||||||||||||||| | ||||||||||||||| |||||    
T  5205 gacaatgcataatatatgcaaggtctgaggttcaaaccccaaccaccac 5253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 191
Target Start/End: Complemental strand, 31960 - 31927
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttca 191  Q
    |||||| |||||||||||||||||||||||||||    
T  31960 gacaatgcataatatatgcaaggtccggggttca 31927  T

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Target: scaffold0262 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 198
Target Start/End: Complemental strand, 15960 - 15928
Alignment:
Q  166 ataatatatgcaaggtccggggttcaaacccca 198  Q
    ||||||||||||||||| |||||||||||||||    
T  15960 ataatatatgcaaggtctggggttcaaacccca 15928  T

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Target: scaffold0238 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 25412 - 25452
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaacccca 198  Q
    |||||| ||||||||||||||||||| |||||| |||||||    
T  25412 gacaatgcataatatatgcaaggtccagggttcgaacccca 25452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 53418 - 53370
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||| |||||||||||| |||||||||||||| || |||||    
T  53418 gacaatgcataaaatatgcaaggtctggggttcaaaccccgaccaccac 53370  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 72813 - 72777
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  72813 gacaatgcataatatatgcaaggtccagggttcaaac 72777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 75348 - 75380
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttc 190  Q
    |||||| ||||||||||||||||||||||||||    
T  75348 gacaatgcataatatatgcaaggtccggggttc 75380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 161164 - 161212
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaaccccaactaccac 206  Q
    |||||| ||||| ||||||||||| ||||||||||||||| || |||||    
T  161164 gacaatgcataaaatatgcaaggttcggggttcaaaccccgaccaccac 161212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Original strand, 99060 - 99096
Alignment:
Q  158 gacaattcataatatatgcaaggtccggggttcaaac 194  Q
    |||||| |||||||||||||||||| |||||||||||    
T  99060 gacaatgcataatatatgcaaggtctggggttcaaac 99096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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