View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4381_low_90 (Length: 217)
Name: NF4381_low_90
Description: NF4381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4381_low_90 |
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Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 40398129 - 40398329
Alignment:
| Q |
1 |
cgtcaacaaaaagaagagtaccggcaactctcccaagcatttgaatggtcatggagtatgccgatgaggatttgagataagatctccagcttttccaatc |
100 |
Q |
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| T |
40398129 |
cgtcaacaaaaagaagagtaccggcaactctcccaagcatttgaatggtcatggagtatgccgatgaggatttgagataagatctccagcttttccaatc |
40398228 |
T |
|
| Q |
101 |
aatagcaagcatatgctttacaacagattgctttcccatgttcgccggtgatataacataacctccacctacaaaataatgtaatttgtaatccttcaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40398229 |
aatagcaagcatatgctttacaacagattgctttcccatgttcgccggtgatataacataacctccacctacaaaataatgtaatttgtaatccttcaac |
40398328 |
T |
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| Q |
201 |
t |
201 |
Q |
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| T |
40398329 |
t |
40398329 |
T |
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