View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4381_low_93 (Length: 210)
Name: NF4381_low_93
Description: NF4381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4381_low_93 |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 51108745 - 51108549
Alignment:
| Q |
1 |
tgtgttttctctttcatttcagtttcaaccaaagcccaagaatgaggatcatgacacagaggagccacagttgaccgaccaaataaaagatgaatatgtc |
100 |
Q |
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| T |
51108745 |
tgtgttttctctttcatttcagtttcaaccaaagcacaagaatgaggatcatgacacagacgagccacagttgaacgaccaaataaaagatgaatatgtc |
51108646 |
T |
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| Q |
101 |
aagcccgtggaagatgatggtaagcatataacaatacaataactcaatgaagtagcatctttaattatattatctccatccttaaatatgtcttgat |
197 |
Q |
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| T |
51108645 |
aagcccgtggaagatgatggtaagcatataacaatacaataactcaatgaagtagcatctttaattatattatctccatccttaaatatgtcttgat |
51108549 |
T |
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