View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4382-Insertion-15 (Length: 530)
Name: NF4382-Insertion-15
Description: NF4382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4382-Insertion-15 |
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Alignment Details
Target: chr6 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 8 - 498
Target Start/End: Original strand, 10676283 - 10676769
Alignment:
| Q |
8 |
atacatgacctaaatcccaagatcacacttttacttccccaccaaatcgaaccataattttgatacaaattgtcggagcaacaacttatagcaaaagtaa |
107 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |
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| T |
10676283 |
atacatgacctaaatcccaagatcacacttttacttccccaccaaatcgaaccataattttgatacaaattgttgaagcaacaacttatagcaaaagtaa |
10676382 |
T |
|
| Q |
108 |
ataaaatgataaaacaatgaaacacaatgtttagttactacgtctttgactacaagaaataggacaatgttacttctaaatcgtccctcaaattaaaaaa |
207 |
Q |
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| T |
10676383 |
ataaaatgataaaacaatgaaacacaatgtttagttactacgtctttgactacaagaaataggacaatgttacttctaaatcgtccctcaaataaaaaaa |
10676482 |
T |
|
| Q |
208 |
ataccatggtctatattgcaataatacttctaaatcgtccctnnnnnnnnnnnnnnntacttctaaatcgtattgtgggagtgggacttggcaaaacaca |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10676483 |
ataccatggtctatattgcaataatacttctaaatcgtccctaaaaaaataaaaaaatacttctaaatcgtattgtgggagtgggacttggcaaaacaca |
10676582 |
T |
|
| Q |
308 |
tgaaatttctcttcaaagttttannnnnnnnnacaagatttctcttcaaagtattgtcatctaaagcaccattgctttaaatattattttatcgtattgt |
407 |
Q |
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||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |
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| T |
10676583 |
tgaaatttctctt---agtttta-ttttttttacaagatttctcttcaaagtattgtcatctaaagcactattgctttaaatataattttatcgtattgt |
10676678 |
T |
|
| Q |
408 |
gataatattaaatctttaaaattgtgatactgaattataaaaaagaatttgattgatannnnnnnggggagattcatattttttaattctt |
498 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
10676679 |
gataatattaaatctttaaaattgtgatactgaattataaaaaagaatttgattgatatttttttggggagattcatattttttaattctt |
10676769 |
T |
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