View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4382_high_9 (Length: 305)

Name: NF4382_high_9
Description: NF4382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4382_high_9
NF4382_high_9
[»] chr3 (20 HSPs)
chr3 (93-272)||(37742723-37742899)
chr3 (94-269)||(44380252-44380427)
chr3 (2-93)||(26529809-26529900)
chr3 (171-266)||(50934501-50934596)
chr3 (96-263)||(33509684-33509851)
chr3 (133-267)||(47426350-47426484)
chr3 (204-274)||(32319473-32319543)
chr3 (201-269)||(10179868-10179936)
chr3 (171-267)||(47186175-47186271)
chr3 (98-269)||(35094544-35094717)
chr3 (171-267)||(31187145-31187241)
chr3 (201-269)||(10018671-10018739)
chr3 (171-267)||(42664673-42664769)
chr3 (171-267)||(34029366-34029462)
chr3 (94-269)||(17466271-17466446)
chr3 (201-269)||(10123211-10123279)
chr3 (115-265)||(39498689-39498838)
chr3 (94-148)||(19619217-19619271)
chr3 (214-266)||(21963073-21963125)
chr3 (212-252)||(25859037-25859077)
[»] chr2 (12 HSPs)
chr2 (95-269)||(34392080-34392254)
chr2 (94-269)||(7381690-7381864)
chr2 (93-253)||(23863800-23863958)
chr2 (171-269)||(21603957-21604055)
chr2 (94-269)||(37357915-37358094)
chr2 (93-244)||(4779608-4779759)
chr2 (94-272)||(4775629-4775808)
chr2 (93-157)||(21606149-21606213)
chr2 (94-246)||(25275620-25275771)
chr2 (196-262)||(14565953-14566019)
chr2 (208-267)||(37811091-37811150)
chr2 (173-236)||(41095863-41095926)
[»] chr5 (14 HSPs)
chr5 (95-269)||(19357261-19357434)
chr5 (94-269)||(11607532-11607707)
chr5 (94-262)||(33858536-33858704)
chr5 (93-267)||(1826259-1826433)
chr5 (133-269)||(39570080-39570216)
chr5 (171-269)||(9827786-9827884)
chr5 (171-267)||(38010689-38010785)
chr5 (94-251)||(33271630-33271787)
chr5 (171-267)||(13015381-13015477)
chr5 (171-267)||(29989962-29990058)
chr5 (200-267)||(13086753-13086820)
chr5 (171-267)||(13478120-13478216)
chr5 (118-212)||(42148201-42148295)
chr5 (171-266)||(13421085-13421180)
[»] chr4 (17 HSPs)
chr4 (94-267)||(12473704-12473877)
chr4 (94-267)||(12528113-12528286)
chr4 (100-269)||(35869575-35869744)
chr4 (94-269)||(22343335-22343510)
chr4 (126-266)||(33249404-33249544)
chr4 (96-266)||(52910050-52910219)
chr4 (94-269)||(51811912-51812087)
chr4 (111-269)||(21260792-21260950)
chr4 (94-269)||(55590480-55590644)
chr4 (171-267)||(52012778-52012874)
chr4 (181-275)||(34829168-34829262)
chr4 (171-267)||(9799438-9799534)
chr4 (208-263)||(49998486-49998541)
chr4 (171-266)||(49999663-49999758)
chr4 (94-163)||(1796654-1796723)
chr4 (93-155)||(35781021-35781083)
chr4 (226-269)||(33174516-33174560)
[»] chr1 (11 HSPs)
chr1 (94-267)||(2569037-2569209)
chr1 (96-267)||(29119324-29119495)
chr1 (98-269)||(32676134-32676305)
chr1 (171-267)||(8809715-8809811)
chr1 (93-267)||(46435462-46435624)
chr1 (118-269)||(8462127-8462277)
chr1 (174-269)||(25161307-25161402)
chr1 (195-269)||(7214510-7214584)
chr1 (218-266)||(16679821-16679868)
chr1 (94-153)||(15387156-15387215)
chr1 (208-267)||(35998252-35998311)
[»] chr6 (8 HSPs)
chr6 (93-266)||(1211841-1212014)
chr6 (94-267)||(5403874-5404047)
chr6 (202-272)||(11753162-11753232)
chr6 (94-269)||(32644836-32645009)
chr6 (171-267)||(34245567-34245663)
chr6 (174-266)||(11113557-11113649)
chr6 (93-138)||(10503256-10503301)
chr6 (112-163)||(26526385-26526436)
[»] chr7 (9 HSPs)
chr7 (94-269)||(35341534-35341709)
chr7 (94-267)||(48250154-48250329)
chr7 (94-269)||(48072387-48072560)
chr7 (94-243)||(32694568-32694717)
chr7 (174-263)||(31306951-31307041)
chr7 (112-163)||(40856949-40857000)
chr7 (208-266)||(36776062-36776120)
chr7 (171-267)||(40893116-40893213)
chr7 (203-267)||(40856392-40856456)
[»] chr8 (8 HSPs)
chr8 (93-267)||(24337827-24338001)
chr8 (94-269)||(11254026-11254200)
chr8 (100-275)||(41179567-41179742)
chr8 (171-260)||(18168392-18168481)
chr8 (171-260)||(18631949-18632038)
chr8 (171-267)||(1514803-1514899)
chr8 (134-259)||(4708345-4708470)
chr8 (215-266)||(32825954-32826005)
[»] scaffold0229 (1 HSPs)
scaffold0229 (94-266)||(13003-13176)
[»] scaffold0032 (1 HSPs)
scaffold0032 (94-269)||(34192-34365)
[»] scaffold0519 (1 HSPs)
scaffold0519 (94-269)||(11193-11367)
[»] scaffold0263 (2 HSPs)
scaffold0263 (218-266)||(23094-23142)
scaffold0263 (171-266)||(23174-23263)
[»] scaffold0041 (1 HSPs)
scaffold0041 (171-267)||(73071-73168)


Alignment Details
Target: chr3 (Bit Score: 109; Significance: 8e-55; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 93 - 272
Target Start/End: Complemental strand, 37742899 - 37742723
Alignment:
Q  93 gggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggta 192  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||| ||||       ||||||||||||||||||||||    
T  37742899 gggatagcacttgtgtaacataatggtatataccattgcccaattataatgtgccacgtggcacactctttaaaaaaatatatcaaataaagcattggta 37742800  T
Q  193 atgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaaccc 272  Q
    |||||| |||||||||||||| |||||||||| |||||| |||||||||||||||||||||   ||||||||||||||||    
T  37742799 atgtaacattggtaggtggcatactctaattgaccaatgatatataccattggtaccttaa---tacacaagtggaaccc 37742723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 44380427 - 44380252
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    ||||| |||||||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||       ||||||||||||||||||  |||    
T  44380427 ggataacacttgtgtaccataatggtatataccattgtccaattagaatgtgtcacgtggcacaccctttaaaaaagtatatcaaataaagcatttataa 44380328  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     ||||||||| |||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  44380327 agtaatattgataggtgacacactataattggtcaatagtatataccattggtaccttaatggtacacaagtggaa 44380252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 26529809 - 26529900
Alignment:
Q  2 catagtcaataaatatgtaaggacccaattttttgttatggatatttttccttcaattagcaaaaccctttactttactcatgcaagaatgg 93  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  26529809 catagtcaataaatatgcaaggacccaattttttggtatggatatttttccttcaattagcaaaaccatttacttcactcattcaagaatgg 26529900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 171 - 266
Target Start/End: Complemental strand, 50934596 - 50934501
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    |||||||||||| |||||  ||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50934596 tatatcaaataatgcatttataaagtaacattggtaagtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 50934501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 96 - 263
Target Start/End: Complemental strand, 33509851 - 33509684
Alignment:
Q  96 atagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatg 195  Q
    ||||||||||||||  ||||||||||||  ||||||  ||||| |||||| || |||||||| |||||       || ||||||||||||||   ||| |    
T  33509851 atagcacttgtgtacaataatggtatatatcattgtctaattagaatgtgccatgtggcacatcctttaaaaaaatacatcaaataaagcatctataaag 33509752  T
Q  196 taatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaa 263  Q
    |||||||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||||||||||||    
T  33509751 taatattggtaggtggcacactctaattggtcaatgatatatactattagtaccttaatggtacacaa 33509684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 267
Target Start/End: Complemental strand, 47426484 - 47426350
Alignment:
Q  133 caattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatgg 232  Q
    |||||| |||||  || ||||||||||||||       |||||||||||||||||   ||| |||| |||| |||||| |||||||||||||||||||||    
T  47426484 caattagaatgtaccatgtggcacaccctttaaaaaaatatatcaaataaagcatctataaagtaacattgataggtgacacactctaattggccaatgg 47426385  T
Q  233 tatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||||| |||||||||||||||||||||||||||    
T  47426384 tatatactattggtaccttaatggtacacaagtgg 47426350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 32319473 - 32319543
Alignment:
Q  204 gtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaacccca 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  32319473 gtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtagaatccca 32319543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 10179868 - 10179936
Alignment:
Q  201 ttggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  10179868 ttggtaggtggcacactctaattgaccaatggtatataccattggtactttaatggtacacaagtggaa 10179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 267
Target Start/End: Complemental strand, 47186271 - 47186175
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    |||||||||||||| |||  ||| |||| ||||||| |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  47186271 tatatcaaataaagtatttataaagtaacattggtatgtggcacactcttattggccaatgttatataacattggtaccttaatggtacacaagtgg 47186175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 98 - 269
Target Start/End: Complemental strand, 35094717 - 35094544
Alignment:
Q  98 agcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatgta 197  Q
    |||| ||||||| ||||||||||| |  |||||| |||||| ||||||||||||| |||| |||||       |||||||||||||  |||  ||| |||    
T  35094717 agcatttgtgtaccataatggtatgtatcattgtccaattagaatgtgtcacgtgacacatcctttaaaaaaatatatcaaataaaatatttataaagta 35094618  T
Q  198 atattggtaggtggcacactc--taattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
    | |||||||||||||| ||||  ||||| | ||||||||||||||| |||||| ||||||||||  ||||||||    
T  35094617 acattggtaggtggcatactctataattagtcaatggtatataccactggtactttaatggtactgaagtggaa 35094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 31187145 - 31187241
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||||||||||| ||||  ||| |||| ||||||| |||||||||||| ||||| ||||| |||||| ||||||||||||||||||||| ||||||    
T  31187145 tatatcaaataaaacatttataaagtaacattggtatgtggcacactcttattggtcaatgttatataacattggtaccttaatggtacataagtgg 31187241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 10018671 - 10018739
Alignment:
Q  201 ttggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
    ||||||||||||||||| | |||| ||||||||||||| ||||||||| ||||||||||||||||||||    
T  10018671 ttggtaggtggcacacttttattgaccaatggtatataacattggtactttaatggtacacaagtggaa 10018739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 267
Target Start/End: Complemental strand, 42664769 - 42664673
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||||||||||| ||||  |||  ||| ||||||| |||||||||||| ||||| ||||| |||||| | ||||||||||||||||||||||||||    
T  42664769 tatatcaaataaaacatttataaaataacattggtatgtggcacactcttattggtcaatgttatataactttggtaccttaatggtacacaagtgg 42664673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 34029366 - 34029462
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||||||||||| ||||  ||| |||| ||| ||| |||||||||||| ||||  ||||| |||||| ||||||||||||||||||| ||||||||    
T  34029366 tatatcaaataaaacatttataaagtaacattagtatgtggcacactcttattgatcaatgttatataacattggtaccttaatggtaaacaagtgg 34029462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 17466446 - 17466271
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    ||||| || ||||||| | ||||||||||| |||||| ||| ||| | ||||  |||||||| |||||||       |||||||| |||| ||||  |||    
T  17466446 ggataacatttgtgtaccgtaatggtatataccattgctcagttagattgtggtacgtggcataccctttaaaaaaatatatcaactaaatcatttataa 17466347  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     |||| |||| |||||| ||||||||||||| |||||| |||||||||||| ||  | ||| |||||||| |||||    
T  17466346 agtaacattgataggtgacacactctaattgaccaatgatatataccattgatatttgaatcgtacacaaatggaa 17466271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 10123211 - 10123279
Alignment:
Q  201 ttggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
    ||||||||||||||||| | |||| ||| || |||||| ||||| ||| ||||||||||||||||||||    
T  10123211 ttggtaggtggcacacttttattgaccattgatatataacattgatactttaatggtacacaagtggaa 10123279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 265
Target Start/End: Original strand, 39498689 - 39498838
Alignment:
Q  115 atggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatgtaatattggtaggtggcac 214  Q
    ||||||||| | |||| ||||||| |||||||||||||||||| |||||       ||||| |||||||  |||  |||  ||| || | |||||| |||    
T  39498689 atggtatatactattgctcaattagaatgtgtcacgtggcacatcctttaaaaat-tatattaaataaaatatttataaaataacatcgataggtgacac 39498787  T
Q  215 actctaattggccaatggtatataccattggtaccttaatggtacacaagt 265  Q
    ||| |||||| |||||  |||||| ||||||||| ||||||||||||||||    
T  39498788 actttaattgaccaataatatatatcattggtactttaatggtacacaagt 39498838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 19619271 - 19619217
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtca 148  Q
    ||||||||| |||||| ||||||||||||| ||||||  |||||| |||||||||    
T  19619271 ggatagcacatgtgtaccataatggtatataccattgcccaattaaaatgtgtca 19619217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 21963073 - 21963125
Alignment:
Q  214 cactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    |||||| ||||| ||||| |||||| ||||| ||||||||||||||| |||||    
T  21963073 cactcttattggtcaatgttatataacattgataccttaatggtacataagtg 21963125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 25859037 - 25859077
Alignment:
Q  212 cacactctaattggccaatggtatataccattggtacctta 252  Q
    |||||||||||||||||||| |||||| |||||||| ||||    
T  25859037 cacactctaattggccaatgttatataacattggtagctta 25859077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 5e-53; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 95 - 269
Target Start/End: Original strand, 34392080 - 34392254
Alignment:
Q  95 gatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaat 194  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||| | |||| || ||||||||||||||       ||||||||||||||||||  |||     
T  34392080 gatagcacttgtgtaccataatggtatataccattgtccaattagattgtgccatgtggcacaccctttaaaaaaatatatcaaataaagcatttataaa 34392179  T
Q  195 gtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34392180 gtaagattggtaggtggcacactctaattggccaatggtatataccattggtacctcaatggtacacaagtggaa 34392254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 7381864 - 7381690
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||| ||||| |||  |||||||||||| | ||||  |||||| |||||||||| || |||| |||||       |||||||||||||| |||  |||    
T  7381864 ggatagaacttgcgtactataatggtatatactattgcccaattaaaatgtgtcacatgacacatcctttaaaaaa-tatatcaaataaagaatttataa 7381766  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     |||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  7381765 agtaacattggtagatggcacactctaattggccaatagtatataccattggtaccttaatggtacacaagcggaa 7381690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 93 - 253
Target Start/End: Original strand, 23863800 - 23863958
Alignment:
Q  93 gggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggta 192  Q
    ||||||||||| ||||| ||||||| |||||  |||||| |||||| |||||| || ||||||||||||||       ||||||||||||||||||  ||    
T  23863800 gggatagcactagtgtaccataatgatatatatcattgtccaattagaatgtgccatgtggcacaccctttaaaaatatatatcaaataaagcatttata 23863899  T
Q  193 atgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaa 253  Q
    | |||| ||||||||||||||||||||||||| |||||   ||||||||||||||||||||    
T  23863900 aagtaacattggtaggtggcacactctaattgaccaat--aatataccattggtaccttaa 23863958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 21604055 - 21603957
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
    ||||||||||||| ||||  ||| |||| |||||||||||  ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21604055 tatatcaaataaaacatttataaagtaacattggtaggtgatacactataattggtcaatggtatataccattggtaccttaatggtacacaagtggaa 21603957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 94 - 269
Target Start/End: Original strand, 37357915 - 37358094
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnnta----tatcaaataaagcattg 189  Q
    |||||||||||||||| |||||| |||||| ||||||| |||||| ||||||||||||||||||   |||        |    ||| ||||||||||||     
T  37357915 ggatagcacttgtgtatcataatagtatataccattgtccaattagaatgtgtcacgtggcacatagtttaaaaaaaaaaaaatattaaataaagcattt 37358014  T
Q  190 gtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     ||| |||| |||| |||||| |||||||||||| | |||||||||||| |||||||||||||||| |||||||||||||    
T  37358015 ataaagtaacattgataggtgacacactctaattagtcaatggtatatatcattggtaccttaatgatacacaagtggaa 37358094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 244
Target Start/End: Complemental strand, 4779759 - 4779608
Alignment:
Q  93 gggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggta 192  Q
    |||||| |||||||||| ||||||||||||| ||||||| |||||| ||||||||||||| |||| |||||       |||||||||||||| |||  ||    
T  4779759 gggataacacttgtgtatcataatggtatataccattgtccaattagaatgtgtcacgtgacacatcctttaaaaaaatatatcaaataaagtatttata 4779660  T
Q  193 atgtaatattggtaggtggcacactctaattggccaatggtatataccattg 244  Q
    | |||| |||| |||| |||||||| ||| ||  ||||||||||||| ||||    
T  4779659 aagtaacattgttaggcggcacactataagtgatcaatggtatatactattg 4779608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 94 - 272
Target Start/End: Complemental strand, 4775808 - 4775629
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagca-ttggta 192  Q
    ||||| || ||||||| ||||||||||||| ||||||| |||||| | |||| || |||||||| |||||       ||||| ||||||| || ||  ||    
T  4775808 ggataacatttgtgtaccataatggtatataccattgtccaattaaattgtgccatgtggcacatcctttaaaaaaatatattaaataaaacaattaata 4775709  T
Q  193 atgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaaccc 272  Q
    | |||| |||||||| ||  ||| ||||||||||||||  |||||| |||||||| |||||||||||| |||||| ||||    
T  4775708 aagtaagattggtagatgagacattctaattggccaataatatatatcattggtagcttaatggtacataagtggtaccc 4775629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 21606213 - 21606149
Alignment:
Q  93 gggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcaca 157  Q
    |||||||||||| |||| ||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  21606213 gggatagcacttctgtatcataatggtatataccattgtccaattagaatgtgtcacgtggcaca 21606149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 246
Target Start/End: Original strand, 25275620 - 25275771
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    ||||||||||| |||| |||||||||||||  |||||| |||||| ||||| |||||||||||| |||||       |||||||||||||| |||   ||    
T  25275620 ggatagcacttctgtatcataatggtatatatcattgtccaattagaatgtatcacgtggcacatcctttaaaaaagtatatcaaataaagtatt-taaa 25275718  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggt 246  Q
     |||| |||| ||||||||||||  ||||||  |||| ||||| || ||||||    
T  25275719 agtaacattgataggtggcacacaataattgatcaatcgtataaactattggt 25275771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 14565953 - 14566019
Alignment:
Q  196 taatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacaca 262  Q
    ||||||||||| || |||||||||| |||  ||||| |||||| ||||||||||||| |||||||||    
T  14565953 taatattggtatgtagcacactctacttgatcaatgatatataacattggtaccttagtggtacaca 14566019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 37811150 - 37811091
Alignment:
Q  208 gtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    |||||||||| | ||||||||||| |||||| |||||||| |  ||||||||||||||||    
T  37811150 gtggcacactttcattggccaatgttatataacattggtatcccaatggtacacaagtgg 37811091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 41095863 - 41095926
Alignment:
Q  173 tatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtata 236  Q
    ||||||||||||||||  ||| |||| ||||||||||||  ||||||||||| ||||| |||||    
T  41095863 tatcaaataaagcatttataaagtaacattggtaggtggtgcactctaattgaccaattgtata 41095926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 95 - 269
Target Start/End: Original strand, 19357261 - 19357434
Alignment:
Q  95 gatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaat 194  Q
    ||||||||||||||| |||||||||||||  |||||| |||||| |||||||||||||| ||| |||||       ||||||||||||||||||  |||     
T  19357261 gatagcacttgtgtaccataatggtatatatcattgtccaattagaatgtgtcacgtgggacatcctttaaaaaa-tatatcaaataaagcatttataaa 19357359  T
Q  195 gtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19357360 gtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccctaatggtacacaagtggaa 19357434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 94 - 269
Target Start/End: Original strand, 11607532 - 11607707
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||||||||||||| ||||||| ||||| ||||||| |||||| |||||| | |||||||||||||||       ||||||||||||| ||||  |||    
T  11607532 ggatagcacttgtgtaccataatgatatataccattgtccaattagaatgtggcccgtggcacaccctttaaaaaagtatatcaaataaaacatttataa 11607631  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  11607632 agtaatattggtaggtggcacactataattggtcaatggtatataccattggtaccttaatggtatacaagtggaa 11607707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 94 - 262
Target Start/End: Original strand, 33858536 - 33858704
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||||||||||||| ||||||||||||| ||||||  |||||| ||||||||||||||||||||||||       ||||||||||||| ||||  |||    
T  33858536 ggatagcacttgtgtaccataatggtatataccattgcccaattagaatgtgtcacgtggcacaccctttaaaaaagtatatcaaataaaacatttataa 33858635  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacaca 262  Q
     |||| |||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||||||    
T  33858636 agtaacattggtaggtggcacactataattggtcaatgatatatactattggtaccttaatggtacaca 33858704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 93 - 267
Target Start/End: Complemental strand, 1826433 - 1826259
Alignment:
Q  93 gggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggta 192  Q
    |||||| |||||||||| ||||||| |||||  ||||||||||||| |||||| || ||||||||  ||||       |||||||||||||||||    |    
T  1826433 gggatatcacttgtgtatcataatgatatatatcattgttcaattaaaatgtgccatgtggcacatactttaaaaaaatatatcaaataaagcatctaca 1826334  T
Q  193 atgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    | |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  1826333 aagtaatattggtaggtgacacactctaattgaccaatggtatataccattggtactttaatggtacacaagtgg 1826259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 269
Target Start/End: Original strand, 39570080 - 39570216
Alignment:
Q  133 caattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatgg 232  Q
    |||||| ||| ||||| ||||||||||||||       ||||||||||||| ||||  ||| |||| ||||||||||| |||||||||||||||||||||    
T  39570080 caattagaatatgtcaggtggcacaccctttaaaaaagtatatcaaataaaacatttataaagtaacattggtaggtgacacactctaattggccaatgg 39570179  T
Q  233 tatataccattggtaccttaatggtacacaagtggaa 269  Q
    |||||||||||| ||| |||||| |||||||||||||    
T  39570180 tatataccattgatactttaatgatacacaagtggaa 39570216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 9827884 - 9827786
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
    |||||||||||||  |||  ||| ||||||||||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||||||||||    
T  9827884 tatatcaaataaaatatttataaagtaatattggtaggtggtacactctaattgactaaaggtatataccattggtaccttaatggtacacaagtggaa 9827786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 38010689 - 38010785
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    |||||||||||||| |||  ||| |||| ||||||| |||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  38010689 tatatcaaataaagtatttataaagtaacattggtatgtggcacactcttattggccaatgttatataacattggtaccttaatggtacacaagtgg 38010785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 94 - 251
Target Start/End: Complemental strand, 33271787 - 33271630
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    ||||||||||| |||| ||||||||||||| | ||||  |||||| |||||| |||||||| || |||||       ||||||||||||||||||  | |    
T  33271787 ggatagcacttatgtaccataatggtatatactattgcccaattagaatgtgccacgtggcgcatcctttaaaaaaatatatcaaataaagcatttatca 33271688  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtacctt 251  Q
     |||| |||| ||| || |||||||||||||||||||| |||||| ||||||||||||    
T  33271687 agtaacattgatagatgacacactctaattggccaatgatatatatcattggtacctt 33271630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 267
Target Start/End: Complemental strand, 13015477 - 13015381
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    |||||||||||||  |||  ||| |||| ||||||| |||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  13015477 tatatcaaataaaatatttataaagtaacattggtatgtggcacactcttattggtcaatgttatataacattggtaccttaatggtacacaagtgg 13015381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 267
Target Start/End: Complemental strand, 29990058 - 29989962
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||||||||||| ||||  ||| |||| ||||||| |||||||||||| ||||| ||||| |||||| ||||| ||||||||||||||||||||||    
T  29990058 tatatcaaataaaacatttataaagtaacattggtatgtggcacactcttattggtcaatgttatataacattgataccttaatggtacacaagtgg 29989962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 13086820 - 13086753
Alignment:
Q  200 attggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||||| |||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  13086820 attggtatgtggcacactcttattggtcaatgttatataacattggtaccttaatggtacacaagtgg 13086753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 13478120 - 13478216
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    |||||||||||||  |||  ||| |||| | ||||| |||||||||||| ||||| ||||| |||||| ||||||| ||||||||||||||||||||    
T  13478120 tatatcaaataaaatatttataaagtaacaatggtatgtggcacactcttattggtcaatgttatataacattggttccttaatggtacacaagtgg 13478216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 42148295 - 42148201
Alignment:
Q  118 gtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatgtaatattggtaggtggc 212  Q
    |||||| |||||||||||||| ||||||  |||||| |||||||||       ||||||||||||| ||||  ||| |||| |||||||||||||    
T  42148295 gtatataccattgttcaattagaatgtgcaacgtggtacaccctttaaaaaaatatatcaaataaaacatttataaagtaacattggtaggtggc 42148201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 266
Target Start/End: Original strand, 13421085 - 13421180
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    ||||| ||||||||||||  ||| |||| |||| ||  ||  ||||||| ||||  ||||| |||||| ||||| |||||||||||||||||||||    
T  13421085 tatattaaataaagcatttataaagtaacattgatatttgatacactcttattgatcaatgttatataacattgataccttaatggtacacaagtg 13421180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 94 - 267
Target Start/End: Complemental strand, 12473877 - 12473704
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||| ||| ||||||||||       |||||||||||||||||   |||    
T  12473877 ggatagcacttgtgtaccataatggtatataccattgctcaattagaatgtgtcatgtgccacaccctttaaaaaaatatatcaaataaagcatctataa 12473778  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12473777 agtaacattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtatacaagtgg 12473704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 94 - 267
Target Start/End: Complemental strand, 12528286 - 12528113
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||| ||| ||||||||||       |||||||||||||||||   |||    
T  12528286 ggatagcacttgtgtaccataatggtatataccattgctcaattagaatgtgtcatgtgccacaccctttaaaaaaatatatcaaataaagcatctataa 12528187  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12528186 agtaacattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtatacaagtgg 12528113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 100 - 269
Target Start/End: Original strand, 35869575 - 35869744
Alignment:
Q  100 cacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatgtaat 199  Q
    ||||||| || ||||||||||||| |||||||||||||| ||||||||||||||||||||||||       ||||||||||||| ||||  ||  ||||     
T  35869575 cacttgtctaccataatggtatataccattgttcaattagaatgtgtcacgtggcacaccctttaaaaaagtatatcaaataaaacatttatatagtaac 35869674  T
Q  200 attggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
    |||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35869675 attggtaggtggcacattataattggtcaatggtatataccattggtaccttaatggtacacaagtggaa 35869744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 22343510 - 22343335
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    ||||| ||| |||||| |||||||||||||  ||||||||||||| ||||||||| |||||||| |||||       ||||||||||||||||||  |||    
T  22343510 ggatatcacctgtgtaccataatggtatatatcattgttcaattagaatgtgtcatgtggcacatcctttaaaataatatatcaaataaagcatttataa 22343411  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     |||| |||| ||| || |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  22343410 agtaacattgatagatgacacactctaattggtcaatgatatataccattgataccttaatggtacacaagtggaa 22343335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 126 - 266
Target Start/End: Original strand, 33249404 - 33249544
Alignment:
Q  126 cattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattgg 225  Q
    ||||| ||||||| | |||| || ||||||||||||||       ||||||||||||||||||  ||| |||| ||||||||||| ||||||||||||||    
T  33249404 cattgctcaattagattgtgccatgtggcacaccctttaaaaatatatatcaaataaagcatttataaagtaacattggtaggtgacacactctaattgg 33249503  T
Q  226 ccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  33249504 ccaattgtatataccatttgtaccttaatggtacacaagtg 33249544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 96 - 266
Target Start/End: Original strand, 52910050 - 52910219
Alignment:
Q  96 atagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatg 195  Q
    ||||||||| |||| ||| ||||||||| |||||| |||||||   |||| ||||||||| ||| |||       | ||||||||||||||||  ||| |    
T  52910050 atagcacttatgtaccattatggtatataccattgatcaattagggtgtgccacgtggcataccttttaatttttt-tatcaaataaagcatttataaag 52910148  T
Q  196 taatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||    
T  52910149 taatattggtaggtggcacactttaattggccaatggtatataacattggtaccattatggtacacaagtg 52910219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 51812087 - 51811912
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    ||||| ||||||| || ||||||||||||| ||||| | |||||| |||||||||| |||||||||||||       ||||||||| |||  |||  |||    
T  51812087 ggataacacttgtatatcataatggtatataccattatccaattagaatgtgtcacatggcacaccctttaaaaaaatatatcaaaaaaaaaatttataa 51811988  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     |||| |||||||||||||| ||||||||||||||||  |||||| | ||| |||||||||||||||| |||||||    
T  51811987 agtaacattggtaggtggcatactctaattggccaataatatatatctttgataccttaatggtacacgagtggaa 51811912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 269
Target Start/End: Complemental strand, 21260950 - 21260792
Alignment:
Q  111 cataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatgtaatattggtaggtg 210  Q
    |||||||||||||  ||||   |||||| |||||| || ||||||||||||||       ||||||||||||| ||||  ||| |||| |||||||||||    
T  21260950 cataatggtatataacattacccaattagaatgtgccatgtggcacaccctttaaaaaaatatatcaaataaaacatttataaagtaacattggtaggtg 21260851  T
Q  211 gcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     |||||||||||||||||||| |||||| ||||||||||||||||||| | ||||||||    
T  21260850 acacactctaattggccaatgatatatatcattggtaccttaatggtatataagtggaa 21260792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 55590644 - 55590480
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||||||||| ||| ||||||||||||| ||||||  |||||| |||||||||||||||||| |||||       ||||||||||||||             
T  55590644 ggatagcacttgcgtaccataatggtatattccattgcccaattagaatgtgtcacgtggcacatcctttaaaaaagtatatcaaataaag--------- 55590554  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
      ||| ||||||||||| |||||| ||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  55590553 --taacattggtaggtgacacactataattgatcaatgatatataccattggtaccttaatggtacacaagtggaa 55590480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 267
Target Start/End: Complemental strand, 52012874 - 52012778
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||||||||||| ||||  ||| |||| ||||||| |||||||||| | ||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  52012874 tatatcaaataaaacatttataaagtaacattggtatgtggcacacttttattggtcaatgttatataacattggtaccttaatggtacacaagtgg 52012778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 275
Target Start/End: Original strand, 34829168 - 34829262
Alignment:
Q  181 aaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaaccccaa 275  Q
    ||||||||  ||| |||| ||||||||||| |||||| |||||||||| || |||||| ||||||||||||||| ||||| ||||| || |||||    
T  34829168 aaagcatttataaagtaacattggtaggtgacacactttaattggccattgatatatatcattggtaccttaatagtacataagtgaaatcccaa 34829262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 9799438 - 9799534
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||| ||||||| ||||  ||| |||| ||||||| |||||||| |||  |||| ||||| |||||| ||||||||||||||||||| ||||||||    
T  9799438 tatattaaataaaacatttataaagtaacattggtatgtggcacattcttgttggtcaatgttatataacattggtaccttaatggtatacaagtgg 9799534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 49998541 - 49998486
Alignment:
Q  208 gtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaa 263  Q
    ||||||||| |||||||||||||| ||||||  |||||||||||||||||||||||    
T  49998541 gtggcacaccctaattggccaatgatatataatattggtaccttaatggtacacaa 49998486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 266
Target Start/End: Original strand, 49999663 - 49999758
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    ||||||||||||||||||  |||  ||| ||||||| ||| ||||||||||||| ||||||  | ||| |||| ||| ||| ||||||||||||||    
T  49999663 tatatcaaataaagcatttataaaataacattggtatgtgacacactctaattgaccaatgacacataacattagtatcttgatggtacacaagtg 49999758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 1796723 - 1796654
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacacccttt 163  Q
    ||||| |||||||||| ||||||||||||| ||||||| |||||| | |||| |||||| |||| |||||    
T  1796723 ggataacacttgtgtaccataatggtatataccattgtccaattaaattgtgccacgtgacacatccttt 1796654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 35781083 - 35781021
Alignment:
Q  93 gggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggca 155  Q
    |||||| |||||| ||| ||||||||||||| ||||||  |||||| |||||| |||||||||    
T  35781083 gggatatcacttgcgtaccataatggtatataccattgcccaattagaatgtgccacgtggca 35781021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 33174560 - 33174516
Alignment:
Q  226 ccaatggtatataccattggta-ccttaatggtacacaagtggaa 269  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||    
T  33174560 ccaatggtatatactcttggtaaccttaatggtacacaagtggaa 33174516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 94 - 267
Target Start/End: Complemental strand, 2569209 - 2569037
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||||||||||||||||||||| ||||| | ||||   ||||| |||||| ||| |||||||||||||       |||||||||||||||||||||||    
T  2569209 ggatagcacttgtgtaacataatgatatatactattgcctaattagaatgtgccacatggcacaccctttaaaaaa-tatatcaaataaagcattggtaa 2569111  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  2569110 tgtaacattggtaggtggcacactctaattggcaaatgatatataccattggtaccttaatggtacacaagtgg 2569037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 96 - 267
Target Start/End: Original strand, 29119324 - 29119495
Alignment:
Q  96 atagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatg 195  Q
    |||||| ||||||| ||||| ||||||| | ||||  |||||| |||||| || ||||||||||||||       |||||||||||||||||   ||| |    
T  29119324 atagcatttgtgtaccataagggtatatacaattgcccaattagaatgtgccatgtggcacaccctttaaaaaaatatatcaaataaagcatctataaag 29119423  T
Q  196 taatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29119424 taacaatgataggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 29119495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 98 - 269
Target Start/End: Complemental strand, 32676305 - 32676134
Alignment:
Q  98 agcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatgta 197  Q
    |||| |||||||  |||||||||||| ||||||| |||||| | |||| || ||||||||  ||||       ||||||||||||||||||  ||| |||    
T  32676305 agcatttgtgtactataatggtatataccattgtccaattagattgtgccatgtggcacatgctttaaaaaaatatatcaaataaagcatttataaagta 32676206  T
Q  198 atattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
    | ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32676205 acattggtaggtggtgcattctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 32676134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 8809715 - 8809811
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||||||||||| ||||  ||| |||| ||||||| |||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  8809715 tatatcaaataaaacatttataaagtaacattggtacgtggcacactcttattggtcaatgttatataacattggtaccttaatggtacacaagtgg 8809811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 93 - 267
Target Start/End: Original strand, 46435462 - 46435624
Alignment:
Q  93 gggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggta 192  Q
    ||||||| ||||||||| ||||||||||||| ||||||  |||||| ||||||||| ||| ||||||||||       |||||||||||||||||   ||    
T  46435462 gggataggacttgtgtaccataatggtatataccattgcccaattagaatgtgtcatgtgacacaccctttaaaaatatatatcaaataaagcatctata 46435561  T
Q  193 atgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    |            ||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46435562 a------------aggtgacgcactctaattggccaattgtatataccattggtaccttaatggtacacaagtgg 46435624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 269
Target Start/End: Complemental strand, 8462277 - 8462127
Alignment:
Q  118 gtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatgtaatattggtaggtggcacact 217  Q
    |||||| ||||||| |||||| ||||||||||||||||| ||||||       ||||| ||||||| ||||  |||  ||| ||||||||||||||||||    
T  8462277 gtatataccattgtccaattaaaatgtgtcacgtggcacgccctttaaaaaagtatattaaataaaacatttataaaataacattggtaggtggcacact 8462178  T
Q  218 ctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     ||||||  ||||| |||||||||||||||| |||||  |||||||||||||    
T  8462177 ataattgatcaatgatatataccattggtactttaat-atacacaagtggaa 8462127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 174 - 269
Target Start/End: Complemental strand, 25161402 - 25161307
Alignment:
Q  174 atcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
    |||||||||| ||||  ||| |||| |||| ||||||||||||| ||||||| ||||||||||||||||||  || ||||||||||||||||||||    
T  25161402 atcaaataaaacatttataaagtaacattgttaggtggcacactgtaattggtcaatggtatataccattgagactttaatggtacacaagtggaa 25161307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 7214510 - 7214584
Alignment:
Q  195 gtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
    ||||||| | |||||| ||||||||||||| |||||  ||||||| ||| ||||||||||||||||||| |||||    
T  7214510 gtaatatcgataggtgacacactctaattgaccaataatatatactattagtaccttaatggtacacaaatggaa 7214584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 16679821 - 16679868
Alignment:
Q  218 ctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  16679821 ctaattggc-aatagtatataacattggtaccttaatggtacacaagtg 16679868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 15387156 - 15387215
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtgg 153  Q
    ||||| ||||| |||| |||||||||||||   |||||||||||| ||||||||||||||    
T  15387156 ggataacacttatgtaccataatggtatataatattgttcaattaaaatgtgtcacgtgg 15387215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 35998311 - 35998252
Alignment:
Q  208 gtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    |||||||||||| |||   ||||| |||||| ||||||||||||||||||| ||||||||    
T  35998311 gtggcacactcttattaatcaatgttatataacattggtaccttaatggtatacaagtgg 35998252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 6e-43; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 93 - 266
Target Start/End: Original strand, 1211841 - 1212014
Alignment:
Q  93 gggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggta 192  Q
    |||||| |||||||||| ||||||||||||| ||||||  | |||| |||||| |||||||||||||||||       ||||||||||||||||| | ||    
T  1211841 gggatatcacttgtgtaccataatggtatataccattgccccattagaatgtgccacgtggcacaccctttaaaaaaatatatcaaataaagcatcgata 1211940  T
Q  193 atgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    | |||| ||||  ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1211941 aagtaacattgaaaggtggcacacactaattagccaatggtatataccattggtaccttaatggtacacaagtg 1212014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 94 - 267
Target Start/End: Original strand, 5403874 - 5404047
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||| ||||||||| |||  || ||||||       ||||||||||||| |||   |||    
T  5403874 ggatagcacttgtgtaccataatggtatataccattgtccaattagaatgtgtcatgtgatacgccctttaaaaaaatatatcaaataaaacatctataa 5403973  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
     |||| |||||||||||||| ||||||| || |||||  ||||||||||| |||||||||||||||||||||||    
T  5403974 agtaacattggtaggtggcagactctaactgaccaataatatataccattagtaccttaatggtacacaagtgg 5404047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 11753232 - 11753162
Alignment:
Q  202 tggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaaccc 272  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  11753232 tggtaggtgggacactctaattggccgatggtatataccattggtaccttaatggtacacaagtggtaccc 11753162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 94 - 269
Target Start/End: Original strand, 32644836 - 32645009
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||||||||||||| ||||||||||||| |||||||||||||| | ||| ||| ||||||||||||||       |||| ||||||||| |||  |||    
T  32644836 ggatagcacttgtgta-cataatggtatataccattgttcaattagattgtatcatgtggcacaccctttaaaaaaatataacaaataaagtatt-ttaa 32644933  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     |||| ||| ||||||| |||||  ||||||||||||| ||||||| || | || |||||||||||||| ||||||    
T  32644934 agtaacatttgtaggtgacacaccttaattggccaatgatatatactatcgatatcttaatggtacacaggtggaa 32645009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 267
Target Start/End: Complemental strand, 34245663 - 34245567
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    |||||||||||||| |||  ||| |||| ||||||| |||||||||| | ||||| ||||| |||||| ||||  ||||||||||||||||||||||    
T  34245663 tatatcaaataaagtatttataaagtaacattggtacgtggcacacttttattggtcaatgttatataacattaataccttaatggtacacaagtgg 34245567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 11113649 - 11113557
Alignment:
Q  174 atcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    ||||||||||||| |   || |||| ||| ||| ||| |||||||| ||| | ||||| |||||| |||||||||||||||||||||||||||    
T  11113649 atcaaataaagcacttacaaagtaacattagtatgtgacacactcttattagtcaatgttatatagcattggtaccttaatggtacacaagtg 11113557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 10503256 - 10503301
Alignment:
Q  93 gggatagcacttgtgtaacataatggtatatgccattgttcaatta 138  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  10503256 gggatagcacttgtgtaccataatggtatataccattgtccaatta 10503301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 163
Target Start/End: Original strand, 26526385 - 26526436
Alignment:
Q  112 ataatggtatatgccattgttcaattataatgtgtcacgtggcacacccttt 163  Q
    |||||||||| | | |||||||||||| ||||||||||||| ||||||||||    
T  26526385 ataatggtatctactattgttcaattagaatgtgtcacgtgacacacccttt 26526436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 35341709 - 35341534
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    ||||| ||||| | || ||||||| |||||  |||||| |||||| ||||||||||||||||||||||||       ||||||||||||| ||||  |||    
T  35341709 ggataacacttatctaccataatgatatatatcattgtccaattagaatgtgtcacgtggcacaccctttaaaaaagtatatcaaataaaacatttataa 35341610  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     |||| |||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  35341609 agtaacattggtaggtggcacactataattggtcaatggtatatatcattggtaccttaatggtacacaagtggaa 35341534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 94 - 267
Target Start/End: Complemental strand, 48250329 - 48250154
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtg--gcacaccctttnnnnnnntatatcaaataaagcattggt 191  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||| |||||| ||| ||  ||| |||||||        ||||||||||||||||   |    
T  48250329 ggatagcacttgtgtaccataatggtatataccattgtccaattagaatgtgacacatgtagcataccctttaaaaaaaaatatcaaataaagcatctat 48250230  T
Q  192 aatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    || |||| ||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||    
T  48250229 aaagtaacattggtaggtggcacactctaattgaccaatgatatatatcattggtaccttaatggtacacaagtgg 48250154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 48072560 - 48072387
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||||||||||||| ||||||||||||| ||||||  |||||| |||||| |||||||||||||||||       || ||||||||||  |||  |||    
T  48072560 ggatagcacttgtgtaccataatggtatataccattgcccaattagaatgtgccacgtggcacaccctttaaaaaaatacatcaaataaaatatttataa 48072461  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
      ||| ||||  | |||||||||||||||||  ||||||  ||||| |||||||||||||| ||||||||||||||    
T  48072460 aataacattgaaatgtggcacactctaattgatcaatgg--tatactattggtaccttaatagtacacaagtggaa 48072387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 94 - 243
Target Start/End: Original strand, 32694568 - 32694717
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    ||||||||||||||||  |||||||||||| ||||||   ||||| ||||||||||||||||||||||||       |||||||||||||| |||  |||    
T  32694568 ggatagcacttgtgtactataatggtatataccattgcctaattagaatgtgtcacgtggcacaccctttaaaaaaatatatcaaataaagaatttataa 32694667  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccatt 243  Q
     |||| |||| ||| ||| |||||||||||  ||||||||||||| ||||    
T  32694668 agtaacattgatagatgggacactctaatttaccaatggtatatatcatt 32694717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 31306951 - 31307041
Alignment:
Q  174 atcaaataaagcattggtaatgtaatattggtaggtggcacactct-aattggccaatggtatataccattggtaccttaatggtacacaa 263  Q
    |||||||||||||||  ||| |||| |||||||||| ||||||| | |||||| ||||| |||||| ||||| ||| ||||||||||||||    
T  31306951 atcaaataaagcatttataaagtaacattggtaggtagcacactttaaattggacaatgatatatatcattgatactttaatggtacacaa 31307041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 40857000 - 40856949
Alignment:
Q  112 ataatggtatatgccattgttcaattataatgtgtcacgtggcacacccttt 163  Q
    ||||||||||||  |||||| |||||| ||||||||| ||||||||||||||    
T  40857000 ataatggtatatatcattgtccaattagaatgtgtcatgtggcacacccttt 40856949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 36776062 - 36776120
Alignment:
Q  208 gtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    ||||||||||||||||  |||||| |||||| ||  |||||||||||||||| ||||||    
T  36776062 gtggcacactctaattcaccaatgttatataacagcggtaccttaatggtacgcaagtg 36776120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 40893116 - 40893213
Alignment:
Q  171 tatatcaaataaa-gcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||||||||||| |||||  ||| |||| |||| ||| ||  ||| |||||||| ||||||||||||||||||  ||| || |||||| ||||||||    
T  40893116 tatatcaaataaaagcatttataaagtaacattgatagatgagacattctaattgaccaatggtatataccattaatactttgatggtatacaagtgg 40893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 40856456 - 40856392
Alignment:
Q  203 ggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    |||||||| |||||||||||||  ||||  |||||| |||| ||||||||||| |||| ||||||    
T  40856456 ggtaggtgacacactctaattgatcaataatatatatcattagtaccttaatgatacataagtgg 40856392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 93 - 267
Target Start/End: Original strand, 24337827 - 24338001
Alignment:
Q  93 gggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggta 192  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||| ||||||  | ||||||||||||||       |||||||||||||||||   ||    
T  24337827 gggatagcacttgtgtaccataatggtatataccattgtccaattagaatgtgctatgtggcacaccctttaaaaatatatatcaaataaagcatctata 24337926  T
Q  193 atgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    | |||| |||||||| |||||||||||||||| || |||||||||||||||| ||||||||| ||||||||||||    
T  24337927 aagtaacattggtagatggcacactctaattgaccgatggtatataccattgctaccttaatagtacacaagtgg 24338001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 94 - 269
Target Start/End: Original strand, 11254026 - 11254200
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||||| ||||||| ||||||||||||| |||||| ||| ||| ||||||||||||||||||||||||       ||||||||||||| ||||  |||    
T  11254026 ggatagcatttgtgtaccataatggtatataccattgctcagttagaatgtgtcacgtggcacaccctttaaaaatgtatatcaaataaaacatttataa 11254125  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     |||| |||||||||||| | ||| ||| ||| ||||| |||||| ||||||||  ||||||||||||||||||||    
T  11254126 agtaacattggtaggtggtatactataa-tggtcaatgatatatatcattggtaatttaatggtacacaagtggaa 11254200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 100 - 275
Target Start/End: Original strand, 41179567 - 41179742
Alignment:
Q  100 cacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatgtaat 199  Q
    |||||||||| ||||||||||||| ||||||  |||||| |||||| || |||||||| || ||       ||||| ||||||| ||||  ||| ||||     
T  41179567 cacttgtgtaccataatggtatataccattgcccaattagaatgtgccatgtggcacatccattaaaaaaatatattaaataaaacatttataaagtaac 41179666  T
Q  200 attggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaaccccaa 275  Q
    || |||||||| |||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  41179667 atcggtaggtgacacactttaattggccaatgatatatatcattggtaccttaatggtacacaagtggaatcccaa 41179742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 18168481 - 18168392
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtaca 260  Q
    |||||||||||||| |||  ||| |||| |||||||||||| ||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  18168481 tatatcaaataaagtatttataaagtaagattggtaggtgggacactctaattgatcaatgatatataccattggtaccttaatggtaca 18168392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 18632038 - 18631949
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtaca 260  Q
    |||||||||||||| |||  ||| |||| |||||||||||| ||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  18632038 tatatcaaataaagtatttataaagtaagattggtaggtgggacactctaattgatcaatgatatataccattggtaccttaatggtaca 18631949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 171 - 267
Target Start/End: Complemental strand, 1514899 - 1514803
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||||||||||| ||||  ||| |||| ||||||| |||| ||||||| ||||  ||||| |||||| ||||||||||||||||||||||||||||    
T  1514899 tatatcaaataaaacatttataaagtaacattggtatgtggtacactcttattgatcaatgttatataacattggtaccttaatggtacacaagtgg 1514803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 134 - 259
Target Start/End: Original strand, 4708345 - 4708470
Alignment:
Q  134 aattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggt 233  Q
    ||||| |||||| |||||||||||||||||       ||||||||||||| ||||  ||| |||| ||||||||||| |||||| ||||||||  ||| |    
T  4708345 aattagaatgtgccacgtggcacaccctttaaaaatatatatcaaataaaacatttataaagtaacattggtaggtgacacactttaattggcgcatgat 4708444  T
Q  234 atataccattggtaccttaatggtac 259  Q
    |||| |||||||||||||| ||||||    
T  4708445 atatgccattggtaccttagtggtac 4708470  T

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Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 32825954 - 32826005
Alignment:
Q  215 actctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    |||||||||||||||||||||| | ||||| ||| |||||||||||||||||    
T  32825954 actctaattggccaatggtatacaacattgatactttaatggtacacaagtg 32826005  T

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Target: scaffold0229 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 94 - 266
Target Start/End: Original strand, 13003 - 13176
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcaca-ccctttnnnnnnntatatcaaataaagcattggta 192  Q
    |||||||||||||||| ||||||||||||| ||||||  | |||| |||||| ||||||||||| ||||||       ||||||||||||||||| | ||    
T  13003 ggatagcacttgtgtaccataatggtatataccattgccccattagaatgtgccacgtggcacaaccctttaaaaaaatatatcaaataaagcatcgata 13102  T
Q  193 atgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    | |||| ||||  ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13103 aagtaacattgaaaggtggcacacactaattagccaatggtatataccattggtaccttaatggtacacaagtg 13176  T

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Target: scaffold0032 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 34365 - 34192
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||||| ||||||| ||||| |||||||  |||| | |||||| ||||||||||||| ||||||||||       |||||||||||||  |||  |||    
T  34365 ggatagcatttgtgtaccataa-ggtatataacattatccaattagaatgtgtcacgtgacacaccctttaaaaaa-tatatcaaataaaatatttataa 34268  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     |||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  34267 agtaatattggtaagtggcacactctaattggccaataatatataccattggtaccttaatggtacacaagtggaa 34192  T

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Target: scaffold0519 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 94 - 269
Target Start/End: Complemental strand, 11367 - 11193
Alignment:
Q  94 ggatagcacttgtgtaacataatggtatatgccattgttcaattataatgtgtcacgtggcacaccctttnnnnnnntatatcaaataaagcattggtaa 193  Q
    |||||||| ||||||| ||||||||||||| |||||| ||| ||| ||||||||||||||||||||||||       ||||||||||||| ||||  |||    
T  11367 ggatagcatttgtgtaccataatggtatataccattgctcagttagaatgtgtcacgtggcacaccctttaaaaatgtatatcaaataaaacatttataa 11268  T
Q  194 tgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtggaa 269  Q
     |||| |||||||||||| | ||| ||| ||| ||||| |||||| ||||||||  ||||||||||||||||||||    
T  11267 agtaacattggtaggtggtatactataa-tggtcaatgatatatatcattggtaatttaatggtacacaagtggaa 11193  T

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Target: scaffold0263 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 23142 - 23094
Alignment:
Q  218 ctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  23142 ctaattggccaatagtatataccattggtaccttaatgatacacaagtg 23094  T

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Target: scaffold0263; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 266
Target Start/End: Original strand, 23174 - 23263
Alignment:
Q  171 tatatcaaataaagcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtg 266  Q
    |||||||||||||  |||  ||| |||| |||||||||||||||||||||||||||||||| ||||      | ||||||||||||||||||||||    
T  23174 tatatcaaataaaatatttataaagtaaaattggtaggtggcacactctaattggccaatgatata------tcgtaccttaatggtacacaagtg 23263  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 267
Target Start/End: Complemental strand, 73168 - 73071
Alignment:
Q  171 tatatcaaataaa-gcattggtaatgtaatattggtaggtggcacactctaattggccaatggtatataccattggtaccttaatggtacacaagtgg 267  Q
    ||||||||||||| |||||  ||| |||| |||| ||| ||  ||| |||||||| ||||||||||||||||||  ||| || |||||| ||||||||    
T  73168 tatatcaaataaaagcatttataaagtaacattgatagatgagacattctaattgaccaatggtatataccattaatactttgatggtatacaagtgg 73071  T

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