View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4382_low_1 (Length: 255)
Name: NF4382_low_1
Description: NF4382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4382_low_1 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 50747437 - 50747165
Alignment:
| Q |
1 |
tccaaacgctgctccacaaaatccaataaaactacccaacacaatttgccacccaaattccatttcctgcaacaatacaaataaacaaaagaagcacttt |
100 |
Q |
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| T |
50747437 |
tccaaacgctgctccacaaaatccaataaaactacccaacacaatttgccacccaaattccatttcctgcaacaatacaaataaacaaaagaagcacttt |
50747338 |
T |
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| Q |
101 |
attatattacccaaagttacaataactgacaaaa-----------------acatatccatagaatgaaggaat-aaactaaatatttatcttttgattt |
182 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
50747337 |
attatattacccaaagttacaataactgacaaaaacatgtgaaaaacaaaaacatatccatagaatgaaggaataaaactaaatatttatcttttgattt |
50747238 |
T |
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| Q |
183 |
agattcaactttaagataaaacaaagacataaaatccaacagaaaagtgaaatcttaccggccacacgtgttg |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50747237 |
agattcaactttaagataaaacaaagacataaaatccaacagaaaagtgaaatcttaccggccacacgtgttg |
50747165 |
T |
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