View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4383_low_8 (Length: 239)
Name: NF4383_low_8
Description: NF4383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4383_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 42208796 - 42209026
Alignment:
| Q |
1 |
ttcttctgccatttcaatcttatatgattatgttgtataaggtatatgccaaatgccaaaaggttgcagtaggaacataaaaacatctaggatggcaccc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
42208796 |
ttcttctgccatttcaatcttatatgattatgttgtataaggtatatgccaaatgccaaaaggttgcagtaggaacataaaaacatctaggatggcatcc |
42208895 |
T |
|
| Q |
101 |
tgccttaagtgatgaggaaaaaataaatgcattaccggtcaaaatccaaggtcaaagcttgggaacgcttctctttcactcgagatatcctcggcactct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42208896 |
tgccttaagtgatgaggaaaaaataaatgcattaccggtcaaaatccaaggtcaaagcttgggaacgcttctctttcactcgagatatcctcggcactct |
42208995 |
T |
|
| Q |
201 |
gtccttcattggaaatagggcaagaataatc |
231 |
Q |
| |
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|||||||||||||||||||||||||| |||| |
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| T |
42208996 |
gtccttcattggaaatagggcaagaagaatc |
42209026 |
T |
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