View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4384-Insertion-10 (Length: 335)

Name: NF4384-Insertion-10
Description: NF4384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4384-Insertion-10
NF4384-Insertion-10
[»] chr2 (3 HSPs)
chr2 (123-335)||(21177512-21177711)
chr2 (122-188)||(44352679-44352745)
chr2 (123-174)||(3925578-3925630)
[»] chr8 (7 HSPs)
chr8 (122-322)||(17061371-17061559)
chr8 (122-322)||(17586799-17586987)
chr8 (122-226)||(17221106-17221210)
chr8 (134-226)||(17221215-17221307)
chr8 (123-168)||(40012202-40012247)
chr8 (123-174)||(18022053-18022105)
chr8 (122-189)||(19784270-19784338)
[»] chr1 (3 HSPs)
chr1 (122-335)||(19841485-19841672)
chr1 (122-188)||(37221015-37221081)
chr1 (120-168)||(41033259-41033307)
[»] chr6 (3 HSPs)
chr6 (123-226)||(28116828-28116931)
chr6 (122-188)||(22042300-22042366)
chr6 (123-188)||(16599809-16599874)
[»] chr5 (1 HSPs)
chr5 (123-226)||(16224181-16224284)
[»] chr4 (5 HSPs)
chr4 (123-222)||(14497006-14497105)
chr4 (122-169)||(812736-812783)
chr4 (285-335)||(55782448-55782495)
chr4 (285-335)||(55846628-55846675)
chr4 (122-189)||(1621874-1621942)
[»] chr3 (7 HSPs)
chr3 (119-206)||(8054709-8054795)
chr3 (137-169)||(8062603-8062635)
chr3 (123-174)||(9180105-9180157)
chr3 (137-169)||(11970040-11970072)
chr3 (285-317)||(11970381-11970413)
chr3 (285-317)||(11983562-11983594)
chr3 (137-169)||(11983896-11983928)
[»] chr7 (2 HSPs)
chr7 (8-66)||(3641711-3641769)
chr7 (123-188)||(10555949-10556014)
[»] scaffold0023 (2 HSPs)
scaffold0023 (123-210)||(130445-130531)
scaffold0023 (123-210)||(134539-134625)
[»] scaffold0526 (1 HSPs)
scaffold0526 (123-188)||(10455-10520)
[»] scaffold1281 (1 HSPs)
scaffold1281 (123-170)||(1912-1959)
[»] scaffold0661 (1 HSPs)
scaffold0661 (123-180)||(963-1020)
[»] scaffold0050 (1 HSPs)
scaffold0050 (123-188)||(18980-19045)
[»] scaffold0571 (1 HSPs)
scaffold0571 (122-189)||(675-743)
[»] scaffold0208 (1 HSPs)
scaffold0208 (137-169)||(14122-14154)
[»] scaffold0144 (1 HSPs)
scaffold0144 (285-317)||(12672-12704)
[»] scaffold0045 (1 HSPs)
scaffold0045 (122-189)||(33683-33751)
[»] scaffold0036 (1 HSPs)
scaffold0036 (137-169)||(109657-109689)


Alignment Details
Target: chr2 (Bit Score: 137; Significance: 2e-71; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 123 - 335
Target Start/End: Complemental strand, 21177711 - 21177512
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagattaattggacacttgtaataatcatacggtcttca 222  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||  ||| |||||||||||||||| |||||||||||    
T  21177711 ggcaaaagttatggtgcataagccataacttatgcaccatgcataaggtcttcacagccatcggatcgattagacacttgtaataatcctacggtcttca 21177612  T
Q  223 gctccaacattcagatcccacattcaaatctcacattcattgattgagtcagttgtgcccgacgaaaccaaactctcacaacctcgccggaaaccaccgt 322  Q
    ||||| ||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21177611 gctcccacattcag-------------atctcacattcattgattgagtcagttgtgcccgacgaaaccaaactctcacaacctcgccggaaaccaccgt 21177525  T

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Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 44352745 - 44352679
Alignment:
Q  122 cggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagat 188  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |  ||||| |||||||||    
T  44352745 cggcaaaagttatggtgcataagccataacttatgcaccatgcataagttaatcacaaccatcagat 44352679  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 3925578 - 3925630
Alignment:
Q  123 ggcaaaagttatggtgcataag-ccttaacttatgcaccatgcataaggtctt 174  Q
    |||||||||||||||||||||| ||||  |||||||||| |||||||| ||||    
T  3925578 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataagctctt 3925630  T

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Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 122 - 322
Target Start/End: Complemental strand, 17061559 - 17061371
Alignment:
Q  122 cggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagattaattggacacttgtaataatcatacggtcttc 221  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  17061559 cggcaaaagttatggtgcataagccataacttatgcaccatgcataaggtcttcacagccatcagatcaattggacacttgtaataatcctacggtcttc 17061460  T
Q  222 agctccaacattcagatcccacattcaaatctcacattcattgattgagtcagttgtgcccgacgaaaccaaactctcacaacctcgccggaaaccaccg 321  Q
    ||        ||||||||||||||||| | | |||||||||||||    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17061459 ag--------ttcagatcccacattcagaccccacattcattgat----tcagttgtgcccgacgaaaccaaacgctcacaacctcgccggaaaccaccg 17061372  T

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Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 122 - 322
Target Start/End: Original strand, 17586799 - 17586987
Alignment:
Q  122 cggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagattaattggacacttgtaataatcatacggtcttc 221  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  17586799 cggcaaaagttatggtgcataagccataacttatgcaccatgcataaggtcttcacagccatcagatcaattggacacttgtaataatcctacggtcttc 17586898  T
Q  222 agctccaacattcagatcccacattcaaatctcacattcattgattgagtcagttgtgcccgacgaaaccaaactctcacaacctcgccggaaaccaccg 321  Q
    ||        ||||||||||||||||| | | |||||||||||||    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  17586899 ag--------ttcagatcccacattcagaccccacattcattgat----tcagttgtgcccgacgaaaccaaacgctcacaacctcgccggaaaccaccg 17586986  T

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Target: chr8; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 17221106 - 17221210
Alignment:
Q  122 cggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagattaattggacacttgtaataatcatacggtcttc 221  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  17221106 cggcaaaagttatggtgcataagccataacttatgcaccatgcataaggtcttcacagccatcagatcaattggacacttgtaataatcctacggtcttc 17221205  T
Q  222 agctc 226  Q
    |||||    
T  17221206 agctc 17221210  T

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Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 17221215 - 17221307
Alignment:
Q  134 tggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagattaattggacacttgtaataatcatacggtcttcagctc 226  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  17221215 tggtgcataagccataacttatgcaccatgcataaggtcttcacagccatcagatcaattggacacttgtaataatcctacggtcttcagctc 17221307  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 40012247 - 40012202
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataa 168  Q
    ||||||||||||||||||||||  ||  ||||||||||||||||||    
T  40012247 ggcaaaagttatggtgcataaggatttccttatgcaccatgcataa 40012202  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 18022053 - 18022105
Alignment:
Q  123 ggcaaaagttatggtgcataag-ccttaacttatgcaccatgcataaggtctt 174  Q
    |||||||||||||||||||||| ||||  |||||||||| |||||||| ||||    
T  18022053 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataagctctt 18022105  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 19784270 - 19784338
Alignment:
Q  122 cggcaaaagttatggtgcataagcc-ttaacttatgcaccatgcataaggtcttcacagccatcagatt 189  Q
    ||||||||||||||||||||||||| ||  |||||||||| |||||||   | ||||| ||||||||||    
T  19784270 cggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatt 19784338  T

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Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 122 - 335
Target Start/End: Original strand, 19841485 - 19841672
Alignment:
Q  122 cggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagattaattggacacttgtaataatcatacggtcttc 221  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  19841485 cggcaaaagttatggtgcataagccataacttatgcaccatgcataaggtcttcacagccatcagatcaattggacacttgtaataatcctac-gtcttc 19841583  T
Q  222 agctccaacattcagatcccacattcaaatctcacattcattgattgagtcagttgtgcccgacgaaaccaaactctcacaacctcgccggaaaccaccg 321  Q
    |||        |||||||||||||||                 ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  19841584 agc--------tcagatcccacattc-----------------attgattcagttgtgcccgacgaaaccaaacgctcacaacctcgccggaaaccactg 19841658  T

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Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 37221015 - 37221081
Alignment:
Q  122 cggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagat 188  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| |||  || |||||||||    
T  37221015 cggcaaaagttatggtgcataaaccataacttatgcaccatgcataaggacttgtcaaccatcagat 37221081  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 41033259 - 41033307
Alignment:
Q  120 agcggcaaaagttatggtgcataagccttaacttatgcaccatgcataa 168  Q
    |||||||||||||||||||||||||  ||  |||||||||||| |||||    
T  41033259 agcggcaaaagttatggtgcataaggatttccttatgcaccatacataa 41033307  T

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Target: chr6 (Bit Score: 84; Significance: 7e-40; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 28116828 - 28116931
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagattaattggacacttgtaataatcatacggtcttca 222  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  28116828 ggcaaaagttatggtgcataagccataacttatgcaccatgcataagatcttcacaaccatcagatcaattggacacttgtaataatcctacggtcttca 28116927  T
Q  223 gctc 226  Q
    ||||    
T  28116928 gctc 28116931  T

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Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 22042366 - 22042300
Alignment:
Q  122 cggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagat 188  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |  ||||| |||||||||    
T  22042366 cggcaaaagttatggtgcataagccataacttatgcaccatgcataagttaatcacaaccatcagat 22042300  T

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Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 16599809 - 16599874
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagat 188  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||  || |||||||||    
T  16599809 ggcaaaagttatggtgcataagccataacttatgcaccatgcataaggacttgtcaaccatcagat 16599874  T

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Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 16224284 - 16224181
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagattaattggacacttgtaataatcatacggtcttca 222  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  16224284 ggcaaaagttatggtgcataagccataacttatgcaccatgaataaggtgttcacaaccatcagatcaattggacacttgtaataatcctacggtcttca 16224185  T
Q  223 gctc 226  Q
    ||||    
T  16224184 gctc 16224181  T

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Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 14497006 - 14497105
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagattaattggacacttgtaataatcatacggtcttca 222  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||| |||||| ||||||||| |||||||||||    
T  14497006 ggcaaaagttatggtgcataagccataacttatgcaccatgcataaggtcttcacaaccatcagatcaatttgacactagtaataatcctacggtcttca 14497105  T

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Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 812783 - 812736
Alignment:
Q  122 cggcaaaagttatggtgcataagccttaacttatgcaccatgcataag 169  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  812783 cggcaaaagttatggtgcataatccataacttatgcaccatgcataag 812736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 55782495 - 55782448
Alignment:
Q  285 cgaaaccaaactctcacaacctcgccggaaaccaccgtcgctgtgtttgtc 335  Q
    ||||||||||| ||||||||||||||||||   ||||||||||||||||||    
T  55782495 cgaaaccaaacgctcacaacctcgccggaa---accgtcgctgtgtttgtc 55782448  T

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Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 55846675 - 55846628
Alignment:
Q  285 cgaaaccaaactctcacaacctcgccggaaaccaccgtcgctgtgtttgtc 335  Q
    ||||||||||| ||||||||||||||||||   ||||||||||||||||||    
T  55846675 cgaaaccaaacgctcacaacctcgccggaa---accgtcgctgtgtttgtc 55846628  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 1621874 - 1621942
Alignment:
Q  122 cggcaaaagttatggtgcataagcc-ttaacttatgcaccatgcataaggtcttcacagccatcagatt 189  Q
    ||||||||||||||||||||||||| ||  |||||||||| |||||||   | ||||| ||||||||||    
T  1621874 cggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatt 1621942  T

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Target: chr3 (Bit Score: 52; Significance: 9e-21; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 8054709 - 8054795
Alignment:
Q  119 gagcggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagattaattggacacttgtaat 206  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |  ||||| |||||||| |||  |||||||||||||    
T  8054709 gagcggcaaaagttatggtgcataagccataacttatgcaccatgcataagttaatcacaaccatcaga-taacaggacacttgtaat 8054795  T

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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 8062635 - 8062603
Alignment:
Q  137 tgcataagccttaacttatgcaccatgcataag 169  Q
    |||||||||| ||||||||||||||||||||||    
T  8062635 tgcataagccataacttatgcaccatgcataag 8062603  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 9180157 - 9180105
Alignment:
Q  123 ggcaaaagttatggtgcataag-ccttaacttatgcaccatgcataaggtctt 174  Q
    |||||||||||||||||||||| ||||  |||||||||| |||||||| ||||    
T  9180157 ggcaaaagttatggtgcataagtccttcccttatgcaccctgcataagctctt 9180105  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 11970040 - 11970072
Alignment:
Q  137 tgcataagccttaacttatgcaccatgcataag 169  Q
    |||||||||| ||||||||||||||||||||||    
T  11970040 tgcataagccataacttatgcaccatgcataag 11970072  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 317
Target Start/End: Original strand, 11970381 - 11970413
Alignment:
Q  285 cgaaaccaaactctcacaacctcgccggaaacc 317  Q
    ||||||||||| |||||||||||||||||||||    
T  11970381 cgaaaccaaacgctcacaacctcgccggaaacc 11970413  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 317
Target Start/End: Complemental strand, 11983594 - 11983562
Alignment:
Q  285 cgaaaccaaactctcacaacctcgccggaaacc 317  Q
    ||||||||||| |||||||||||||||||||||    
T  11983594 cgaaaccaaacgctcacaacctcgccggaaacc 11983562  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 11983928 - 11983896
Alignment:
Q  137 tgcataagccttaacttatgcaccatgcataag 169  Q
    |||||||||| ||||||||||||||||||||||    
T  11983928 tgcataagccataacttatgcaccatgcataag 11983896  T

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Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 3641769 - 3641711
Alignment:
Q  8 tcgtcgacgctatccttgtccgtcgttacagagtgaaatcacgttgtttgtttgtagtg 66  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  3641769 tcgtcgacgctatccttgtccgtcgttacacagggaaatcacgttgtttgtttgtagtg 3641711  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 10555949 - 10556014
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagat 188  Q
    ||||||||||||||||||||||  ||  |||||||||||| |||||||   ||||| |||||||||    
T  10555949 ggcaaaagttatggtgcataaggatttgcttatgcaccatacataaggaaatcacaaccatcagat 10556014  T

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Target: scaffold0023 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 130531 - 130445
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagattaattggacacttgtaataatc 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |  ||||| |||||||| |||  |||||| ||||||||||    
T  130531 ggcaaaagttatggtgcataagccataacttatgcaccatgcataagttaatcacaaccatcaga-taacaggacacgtgtaataatc 130445  T

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Target: scaffold0023; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 134625 - 134539
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagattaattggacacttgtaataatc 210  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |  ||||| |||||||| |||  |||||| ||||||||||    
T  134625 ggcaaaagttatggtgcataagccataacttatgcaccatgcataagttaatcacaaccatcaga-taacaggacacgtgtaataatc 134539  T

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Target: scaffold0526 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 10455 - 10520
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagat 188  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||  || |||||||||    
T  10455 ggcaaaagttatggtgcataagccataacttatgcaccatgcataaggacttgtcaaccatcagat 10520  T

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Target: scaffold1281 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold1281
Description:

Target: scaffold1281; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 1959 - 1912
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataagg 170  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  1959 ggcaaaagttatggtgcataagccataacttatgcaccatgcataagg 1912  T

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Target: scaffold0661 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 963 - 1020
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagc 180  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||||    
T  963 ggcaaaaattatggtgcataagccataacttatgtaccatgcataaggtctttacagc 1020  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 19045 - 18980
Alignment:
Q  123 ggcaaaagttatggtgcataagccttaacttatgcaccatgcataaggtcttcacagccatcagat 188  Q
    ||||||||||||||||||||||  ||  |||||||||||| |||||||   ||||| |||||||||    
T  19045 ggcaaaagttatggtgcataaggatttgcttatgcaccatacataaggaaatcacaaccatcagat 18980  T

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Target: scaffold0571 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 743 - 675
Alignment:
Q  122 cggcaaaagttatggtgcataagcc-ttaacttatgcaccatgcataaggtcttcacagccatcagatt 189  Q
    ||||||||||||||||||||||||| ||  |||||||||| |||||||   | ||||| ||||||||||    
T  743 cggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatt 675  T

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Target: scaffold0208 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 14122 - 14154
Alignment:
Q  137 tgcataagccttaacttatgcaccatgcataag 169  Q
    |||||||||| ||||||||||||||||||||||    
T  14122 tgcataagccataacttatgcaccatgcataag 14154  T

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Target: scaffold0144 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 317
Target Start/End: Original strand, 12672 - 12704
Alignment:
Q  285 cgaaaccaaactctcacaacctcgccggaaacc 317  Q
    ||||||||||| |||||||||||||||||||||    
T  12672 cgaaaccaaacgctcacaacctcgccggaaacc 12704  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 33683 - 33751
Alignment:
Q  122 cggcaaaagttatggtgcataagcc-ttaacttatgcaccatgcataaggtcttcacagccatcagatt 189  Q
    ||||||||||||||||||||||||| ||  |||||||||| |||||||   | ||||| ||||||||||    
T  33683 cggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatt 33751  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 109689 - 109657
Alignment:
Q  137 tgcataagccttaacttatgcaccatgcataag 169  Q
    |||||||||| ||||||||||||||||||||||    
T  109689 tgcataagccataacttatgcaccatgcataag 109657  T

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