View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4384-Insertion-6 (Length: 531)

Name: NF4384-Insertion-6
Description: NF4384
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4384-Insertion-6
NF4384-Insertion-6
[»] chr4 (50 HSPs)
chr4 (199-329)||(11241558-11241688)
chr4 (215-329)||(3930348-3930462)
chr4 (68-170)||(6373255-6373357)
chr4 (215-329)||(13198676-13198790)
chr4 (215-319)||(16555695-16555799)
chr4 (206-318)||(5206138-5206250)
chr4 (215-329)||(22681652-22681765)
chr4 (212-318)||(35393545-35393651)
chr4 (8-72)||(6373379-6373443)
chr4 (237-322)||(8488278-8488363)
chr4 (231-320)||(27304894-27304983)
chr4 (394-497)||(3930179-3930284)
chr4 (394-497)||(11241389-11241494)
chr4 (394-500)||(13198854-13198963)
chr4 (444-498)||(3930480-3930534)
chr4 (443-500)||(8488185-8488243)
chr4 (395-500)||(35393726-35393832)
chr4 (263-320)||(49178636-49178693)
chr4 (396-503)||(54508809-54508918)
chr4 (444-498)||(16555514-16555569)
chr4 (444-500)||(24775783-24775840)
chr4 (444-500)||(36095814-36095871)
chr4 (444-496)||(22681576-22681628)
chr4 (447-497)||(7603422-7603472)
chr4 (444-497)||(16555817-16555871)
chr4 (444-500)||(293217-293274)
chr4 (498-531)||(6373230-6373263)
chr4 (271-320)||(16555818-16555866)
chr4 (446-498)||(22681881-22681934)
chr4 (444-496)||(43292038-43292091)
chr4 (394-493)||(49178763-49178866)
chr4 (444-496)||(7603146-7603197)
chr4 (444-499)||(18077202-18077258)
chr4 (444-503)||(26207746-26207806)
chr4 (444-499)||(43051252-43051308)
chr4 (445-494)||(54509116-54509167)
chr4 (394-433)||(3844431-3844470)
chr4 (444-498)||(5205987-5206042)
chr4 (394-496)||(8488431-8488534)
chr4 (444-483)||(27304731-27304770)
chr4 (394-483)||(39415239-39415330)
chr4 (444-498)||(50678778-50678833)
chr4 (444-498)||(56505692-56505747)
chr4 (444-497)||(169439-169493)
chr4 (444-498)||(11241661-11241715)
chr4 (445-497)||(5206231-5206283)
chr4 (271-320)||(8181996-8182045)
chr4 (271-320)||(16555520-16555568)
chr4 (446-494)||(47219203-47219252)
chr4 (444-499)||(9023680-9023736)
[»] scaffold0802 (3 HSPs)
scaffold0802 (215-329)||(1288-1402)
scaffold0802 (394-497)||(1118-1224)
scaffold0802 (444-497)||(1420-1474)
[»] chr8 (64 HSPs)
chr8 (215-329)||(15156053-15156167)
chr8 (215-329)||(12281196-12281310)
chr8 (215-319)||(37752186-37752290)
chr8 (215-329)||(765806-765920)
chr8 (213-329)||(43162405-43162521)
chr8 (215-319)||(43245943-43246047)
chr8 (215-329)||(34313932-34314046)
chr8 (215-329)||(41662271-41662385)
chr8 (216-319)||(16929013-16929115)
chr8 (231-320)||(18019875-18019964)
chr8 (215-318)||(74864-74967)
chr8 (208-320)||(7127828-7127940)
chr8 (246-326)||(9465675-9465755)
chr8 (394-497)||(34313765-34313868)
chr8 (394-498)||(15155882-15155989)
chr8 (231-320)||(37670132-37670221)
chr8 (394-499)||(18020037-18020142)
chr8 (247-320)||(33748161-33748236)
chr8 (394-499)||(41662105-41662213)
chr8 (444-494)||(9465874-9465923)
chr8 (394-497)||(12281374-12281480)
chr8 (394-497)||(16929191-16929296)
chr8 (394-497)||(37752365-37752470)
chr8 (394-497)||(43162234-43162341)
chr8 (394-433)||(765983-766022)
chr8 (394-498)||(33747983-33748089)
chr8 (444-497)||(43245871-43245925)
chr8 (448-499)||(6092775-6092825)
chr8 (407-494)||(9930550-9930633)
chr8 (444-499)||(13936721-13936776)
chr8 (444-499)||(25439126-25439181)
chr8 (448-497)||(3307338-3307388)
chr8 (444-498)||(3463641-3463694)
chr8 (444-497)||(15156185-15156239)
chr8 (444-497)||(22851390-22851444)
chr8 (394-495)||(74688-74789)
chr8 (444-493)||(43162539-43162588)
chr8 (245-310)||(43597892-43597957)
chr8 (445-482)||(43598756-43598793)
chr8 (458-498)||(767720-767760)
chr8 (444-499)||(9823361-9823417)
chr8 (444-499)||(43246176-43246232)
chr8 (445-499)||(7127923-7127978)
chr8 (446-500)||(12281121-12281176)
chr8 (444-479)||(16928961-16928996)
chr8 (263-322)||(22786930-22786989)
chr8 (448-490)||(7127660-7127702)
chr8 (444-497)||(9822748-9822802)
chr8 (447-497)||(11007563-11007613)
chr8 (444-497)||(23123338-23123392)
chr8 (394-432)||(37670021-37670059)
chr8 (444-497)||(37752084-37752138)
chr8 (444-497)||(39724048-39724102)
chr8 (444-497)||(41662403-41662457)
chr8 (451-500)||(9465604-9465653)
chr8 (271-320)||(12281427-12281475)
chr8 (446-498)||(13026634-13026687)
chr8 (444-501)||(23123517-23123573)
chr8 (444-476)||(74984-75016)
chr8 (444-495)||(765736-765788)
chr8 (447-475)||(9930842-9930870)
chr8 (263-319)||(11007651-11007707)
chr8 (444-503)||(13937389-13937449)
chr8 (444-499)||(20861638-20861694)
[»] chr1 (43 HSPs)
chr1 (199-329)||(8108890-8109020)
chr1 (212-329)||(17518472-17518588)
chr1 (215-329)||(41082980-41083094)
chr1 (215-329)||(47955378-47955492)
chr1 (215-319)||(22149580-22149683)
chr1 (394-494)||(8108724-8108826)
chr1 (394-498)||(17518302-17518408)
chr1 (394-498)||(47955556-47955663)
chr1 (394-503)||(31848142-31848252)
chr1 (444-501)||(13589659-13589716)
chr1 (444-498)||(41083211-41083265)
chr1 (394-501)||(22149399-22149506)
chr1 (410-505)||(1176709-1176804)
chr1 (444-495)||(17518602-17518653)
chr1 (444-499)||(20480166-20480221)
chr1 (444-501)||(49284405-49284463)
chr1 (444-500)||(8108993-8109050)
chr1 (444-500)||(39692000-39692057)
chr1 (444-497)||(50615621-50615674)
chr1 (444-497)||(50623449-50623502)
chr1 (446-501)||(22149701-22149757)
chr1 (444-499)||(47955304-47955360)
chr1 (215-317)||(31847966-31848067)
chr1 (199-250)||(48190798-48190848)
chr1 (444-497)||(6002237-6002291)
chr1 (394-432)||(41083158-41083196)
chr1 (444-497)||(48190771-48190825)
chr1 (442-499)||(48313790-48313848)
chr1 (444-497)||(20371353-20371406)
chr1 (197-234)||(24671281-24671318)
chr1 (444-497)||(27172116-27172169)
chr1 (448-497)||(49318447-49318496)
chr1 (200-228)||(4692431-4692459)
chr1 (200-228)||(6703892-6703920)
chr1 (200-228)||(9347549-9347577)
chr1 (445-497)||(20480613-20480665)
chr1 (271-319)||(22149701-22149748)
chr1 (200-228)||(32162757-32162785)
chr1 (203-251)||(39690825-39690872)
chr1 (450-494)||(46057199-46057243)
chr1 (200-228)||(46824276-46824304)
chr1 (444-496)||(47498495-47498547)
chr1 (199-250)||(48191333-48191382)
[»] chr2 (49 HSPs)
chr2 (212-329)||(6171325-6171442)
chr2 (215-329)||(20347332-20347446)
chr2 (215-329)||(30190995-30191109)
chr2 (215-329)||(32673011-32673125)
chr2 (212-319)||(11883692-11883799)
chr2 (215-322)||(26737655-26737763)
chr2 (215-319)||(40469607-40469711)
chr2 (241-321)||(15920911-15920991)
chr2 (246-320)||(40221489-40221563)
chr2 (215-320)||(17345803-17345908)
chr2 (394-503)||(20347157-20347268)
chr2 (394-497)||(6171156-6171261)
chr2 (394-497)||(30191173-30191279)
chr2 (394-497)||(32672842-32672948)
chr2 (444-501)||(32673143-32673200)
chr2 (394-477)||(15920799-15920883)
chr2 (394-497)||(40469427-40469533)
chr2 (444-500)||(2638817-2638874)
chr2 (444-500)||(11883620-11883677)
chr2 (444-500)||(40469729-40469786)
chr2 (446-498)||(17346037-17346089)
chr2 (444-499)||(24832329-24832385)
chr2 (444-500)||(26737479-26737534)
chr2 (446-500)||(6495723-6495778)
chr2 (444-499)||(7980003-7980058)
chr2 (199-250)||(18296670-18296720)
chr2 (444-497)||(11883926-11883980)
chr2 (444-501)||(20347464-20347522)
chr2 (444-494)||(41790494-41790544)
chr2 (444-499)||(18296693-18296749)
chr2 (442-497)||(26737779-26737835)
chr2 (444-498)||(2639482-2639537)
chr2 (444-502)||(8851582-8851641)
chr2 (448-483)||(15321405-15321440)
chr2 (444-495)||(18055050-18055100)
chr2 (444-494)||(18055316-18055367)
chr2 (444-502)||(26692391-26692450)
chr2 (444-498)||(26841586-26841641)
chr2 (444-498)||(30190922-30190977)
chr2 (446-497)||(40221313-40221364)
chr2 (444-494)||(43495484-43495535)
chr2 (442-499)||(6171454-6171512)
chr2 (444-497)||(7591850-7591904)
chr2 (271-320)||(11883628-11883676)
chr2 (271-320)||(11883927-11883975)
chr2 (271-320)||(24832336-24832384)
chr2 (271-320)||(40469730-40469778)
chr2 (445-496)||(6495468-6495519)
chr2 (444-496)||(18750126-18750178)
[»] scaffold1221 (3 HSPs)
scaffold1221 (199-329)||(1537-1667)
scaffold1221 (394-494)||(1731-1834)
scaffold1221 (444-497)||(1511-1564)
[»] chr6 (35 HSPs)
chr6 (215-329)||(18242024-18242138)
chr6 (215-319)||(3403867-3403971)
chr6 (215-319)||(30388242-30388346)
chr6 (215-320)||(2762555-2762660)
chr6 (246-320)||(10039844-10039918)
chr6 (215-320)||(13579529-13579634)
chr6 (394-497)||(33971994-33972098)
chr6 (246-320)||(11656583-11656657)
chr6 (394-500)||(18241851-18241960)
chr6 (396-500)||(23250589-23250694)
chr6 (444-505)||(21031971-21032032)
chr6 (261-322)||(33972188-33972249)
chr6 (442-498)||(10039675-10039731)
chr6 (448-499)||(31598732-31598783)
chr6 (394-497)||(11656730-11656836)
chr6 (445-499)||(31598274-31598328)
chr6 (394-497)||(30388062-30388166)
chr6 (444-510)||(2354810-2354877)
chr6 (444-498)||(3403989-3404044)
chr6 (444-497)||(3403717-3403771)
chr6 (444-494)||(3825530-3825580)
chr6 (444-498)||(13579651-13579705)
chr6 (444-497)||(18242156-18242210)
chr6 (449-498)||(21032285-21032335)
chr6 (263-321)||(33658560-33658618)
chr6 (444-485)||(30388362-30388403)
chr6 (448-479)||(12714450-12714481)
chr6 (444-499)||(33655115-33655170)
chr6 (444-498)||(33829636-33829691)
chr6 (444-498)||(23250892-23250946)
chr6 (444-497)||(33828990-33829044)
chr6 (271-320)||(3403722-3403770)
chr6 (271-320)||(3403990-3404038)
chr6 (446-494)||(23250772-23250821)
chr6 (444-499)||(7654548-7654604)
[»] chr5 (46 HSPs)
chr5 (215-329)||(25115829-25115943)
chr5 (215-329)||(25174921-25175035)
chr5 (215-319)||(18433087-18433191)
chr5 (215-318)||(34576937-34577040)
chr5 (215-318)||(26020522-26020625)
chr5 (195-320)||(5187574-5187699)
chr5 (199-317)||(9665582-9665700)
chr5 (199-284)||(22429138-22429223)
chr5 (394-498)||(25175099-25175206)
chr5 (394-500)||(18433265-18433373)
chr5 (394-498)||(25116007-25116116)
chr5 (394-497)||(34577113-34577217)
chr5 (215-317)||(5779742-5779844)
chr5 (444-498)||(22429196-22429250)
chr5 (394-498)||(22428933-22429037)
chr5 (445-494)||(23011383-23011432)
chr5 (445-494)||(41382896-41382945)
chr5 (445-497)||(23011079-23011131)
chr5 (444-498)||(33324838-33324893)
chr5 (443-501)||(41383166-41383224)
chr5 (445-500)||(25940518-25940574)
chr5 (444-499)||(26020448-26020504)
chr5 (446-494)||(31569910-31569958)
chr5 (444-498)||(5187830-5187885)
chr5 (446-497)||(12441042-12441093)
chr5 (444-498)||(18816951-18817006)
chr5 (444-497)||(18433015-18433069)
chr5 (263-317)||(23011261-23011315)
chr5 (394-497)||(9665776-9665879)
chr5 (446-498)||(43464194-43464246)
chr5 (444-483)||(9665570-9665609)
chr5 (446-500)||(34147512-34147567)
chr5 (444-501)||(11350804-11350861)
chr5 (444-497)||(18817611-18817665)
chr5 (447-497)||(22729008-22729058)
chr5 (444-502)||(22729440-22729498)
chr5 (444-494)||(34576870-34576920)
chr5 (444-500)||(5187548-5187605)
chr5 (271-320)||(5187831-5187879)
chr5 (262-315)||(12441196-12441249)
chr5 (452-497)||(12441320-12441364)
chr5 (271-320)||(18433020-18433068)
chr5 (444-500)||(19514963-19515020)
chr5 (444-501)||(37610198-37610255)
chr5 (444-501)||(37780316-37780373)
chr5 (264-320)||(9869739-9869795)
[»] chr3 (49 HSPs)
chr3 (215-329)||(20968888-20969002)
chr3 (215-329)||(10293680-10293793)
chr3 (215-319)||(18874961-18875065)
chr3 (215-318)||(9026805-9026907)
chr3 (394-502)||(20968713-20968824)
chr3 (394-497)||(10293857-10293963)
chr3 (246-320)||(3644721-3644795)
chr3 (444-497)||(21896511-21896564)
chr3 (394-498)||(47870822-47870926)
chr3 (444-500)||(47871122-47871178)
chr3 (444-497)||(10293608-10293662)
chr3 (410-494)||(9026739-9026823)
chr3 (451-498)||(10771503-10771550)
chr3 (444-497)||(3644783-3644837)
chr3 (447-499)||(17441066-17441119)
chr3 (444-501)||(26007178-26007235)
chr3 (445-498)||(18874881-18874935)
chr3 (444-497)||(3353128-3353181)
chr3 (445-497)||(8314013-8314066)
chr3 (445-498)||(8315083-8315136)
chr3 (263-320)||(13657622-13657679)
chr3 (394-497)||(17372298-17372403)
chr3 (442-494)||(23630033-23630086)
chr3 (444-497)||(42673296-42673349)
chr3 (262-319)||(45060774-45060830)
chr3 (262-318)||(4947377-4947433)
chr3 (394-497)||(9026982-9027086)
chr3 (269-321)||(18874885-18874936)
chr3 (444-494)||(1101090-1101141)
chr3 (394-433)||(13657513-13657552)
chr3 (443-497)||(20969018-20969073)
chr3 (171-251)||(21895657-21895736)
chr3 (394-433)||(26540817-26540856)
chr3 (442-497)||(42627544-42627599)
chr3 (262-320)||(1101091-1101148)
chr3 (444-494)||(1928434-1928484)
chr3 (445-479)||(4947278-4947312)
chr3 (444-494)||(14015964-14016014)
chr3 (444-497)||(18875191-18875245)
chr3 (444-494)||(26540694-26540744)
chr3 (447-497)||(28702278-28702328)
chr3 (445-498)||(45060872-45060926)
chr3 (263-320)||(17372474-17372531)
chr3 (443-496)||(17372593-17372645)
chr3 (271-320)||(18875192-18875240)
chr3 (444-497)||(42672978-42673031)
chr3 (446-498)||(47665910-47665963)
chr3 (200-228)||(47666333-47666361)
chr3 (444-499)||(53687886-53687942)
[»] chr7 (54 HSPs)
chr7 (215-329)||(9412193-9412307)
chr7 (215-329)||(3687525-3687639)
chr7 (195-320)||(6908391-6908515)
chr7 (206-317)||(35080132-35080243)
chr7 (206-318)||(5349641-5349753)
chr7 (231-319)||(13772793-13772881)
chr7 (231-322)||(15567164-15567255)
chr7 (231-319)||(33628466-33628554)
chr7 (215-320)||(34235856-34235961)
chr7 (394-500)||(9412020-9412129)
chr7 (394-497)||(3687353-3687461)
chr7 (394-498)||(23686667-23686772)
chr7 (445-498)||(6908212-6908265)
chr7 (445-497)||(38191566-38191619)
chr7 (444-496)||(8953889-8953941)
chr7 (444-482)||(5349733-5349771)
chr7 (444-506)||(36527375-36527437)
chr7 (444-501)||(13744233-13744290)
chr7 (444-498)||(13863312-13863367)
chr7 (394-500)||(15566989-15567095)
chr7 (394-472)||(5349489-5349566)
chr7 (394-494)||(27096290-27096392)
chr7 (394-494)||(27181911-27182013)
chr7 (444-497)||(48359320-48359373)
chr7 (445-497)||(23686421-23686473)
chr7 (444-495)||(29291808-29291860)
chr7 (445-497)||(35079960-35080012)
chr7 (444-483)||(35080223-35080263)
chr7 (444-499)||(44600135-44600191)
chr7 (444-498)||(9412325-9412380)
chr7 (444-498)||(13772640-13772695)
chr7 (215-258)||(29291982-29292025)
chr7 (444-502)||(30857904-30857963)
chr7 (444-498)||(33628660-33628715)
chr7 (444-497)||(3687656-3687710)
chr7 (447-496)||(5735253-5735303)
chr7 (394-432)||(6908280-6908318)
chr7 (444-497)||(13772901-13772955)
chr7 (444-494)||(22740591-22740641)
chr7 (444-497)||(29292041-29292095)
chr7 (446-499)||(38826915-38826969)
chr7 (444-497)||(44599489-44599543)
chr7 (450-494)||(5735553-5735598)
chr7 (445-494)||(6908485-6908534)
chr7 (271-320)||(9412028-9412076)
chr7 (271-320)||(18925230-18925279)
chr7 (444-500)||(20419324-20419381)
chr7 (444-499)||(3205093-3205149)
chr7 (444-499)||(17156965-17157021)
chr7 (446-497)||(18925062-18925114)
chr7 (444-496)||(18925322-18925373)
chr7 (444-499)||(22740154-22740210)
chr7 (444-476)||(34235978-34236010)
chr7 (446-493)||(38191387-38191435)
[»] scaffold0319 (4 HSPs)
scaffold0319 (215-319)||(6575-6679)
scaffold0319 (444-497)||(6697-6750)
scaffold0319 (444-499)||(6392-6448)
scaffold0319 (271-320)||(6399-6447)
[»] scaffold0192 (3 HSPs)
scaffold0192 (215-319)||(25247-25351)
scaffold0192 (444-499)||(25369-25425)
scaffold0192 (271-320)||(25370-25418)
[»] scaffold0110 (3 HSPs)
scaffold0110 (215-321)||(45683-45789)
scaffold0110 (394-499)||(45535-45642)
scaffold0110 (444-498)||(45807-45861)
[»] scaffold0002 (2 HSPs)
scaffold0002 (215-312)||(411993-412090)
scaffold0002 (444-497)||(411923-411976)
[»] scaffold0598 (2 HSPs)
scaffold0598 (222-320)||(6752-6850)
scaffold0598 (394-479)||(6626-6710)
[»] scaffold0015 (3 HSPs)
scaffold0015 (215-322)||(16925-17032)
scaffold0015 (394-497)||(17103-17209)
scaffold0015 (444-497)||(16853-16905)
[»] scaffold0001 (7 HSPs)
scaffold0001 (246-317)||(439001-439072)
scaffold0001 (396-498)||(439151-439254)
scaffold0001 (444-497)||(438930-438984)
scaffold0001 (445-494)||(183367-183416)
scaffold0001 (263-317)||(183544-183598)
scaffold0001 (271-317)||(439203-439248)
scaffold0001 (271-320)||(438935-438983)
[»] scaffold0009 (2 HSPs)
scaffold0009 (394-501)||(205683-205790)
scaffold0009 (444-499)||(205861-205914)
[»] scaffold0376 (2 HSPs)
scaffold0376 (444-499)||(7453-7508)
scaffold0376 (444-497)||(7600-7653)
[»] scaffold0328 (1 HSPs)
scaffold0328 (444-497)||(6795-6849)
[»] scaffold0460 (1 HSPs)
scaffold0460 (444-497)||(763-816)
[»] scaffold0433 (1 HSPs)
scaffold0433 (394-433)||(10690-10729)
[»] scaffold0176 (1 HSPs)
scaffold0176 (444-503)||(19615-19674)
[»] scaffold0069 (1 HSPs)
scaffold0069 (444-497)||(50507-50560)
[»] scaffold0041 (1 HSPs)
scaffold0041 (444-499)||(38695-38751)


Alignment Details
Target: chr4 (Bit Score: 107; Significance: 2e-53; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 199 - 329
Target Start/End: Complemental strand, 11241688 - 11241558
Alignment:
Q  199 ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcag 298  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |    
T  11241688 ttttgccaattgtgggattttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaatttcacttttgccccttatctttttg 11241589  T
Q  299 ctaattgtgcgattttgcaccctcacttata 329  Q
    |||||||||||||||||||||||||||||||    
T  11241588 ctaattgtgcgattttgcaccctcacttata 11241558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 3930462 - 3930348
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||    
T  3930462 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgtccaattgcacttttgtcccttatctttttgctaattgtgcgatttt 3930363  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  3930362 gcaccctcacttata 3930348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 6373357 - 6373255
Alignment:
Q  68 tcttgatgatgaaaattaaagaaaattaagtgtgttttagtttcttaaagctaaatttcaatttaatctaaacctaattttaatccttctatagtttaat 167  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  6373357 tcttgatgatgaaaattaaagaaaattaagtgtgttttggtttcttaaagctaaatttcaatttaatctaaacctaattttaatccttctacaatttaat 6373258  T
Q  168 ctt 170  Q
    |||    
T  6373257 ctt 6373255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 13198676 - 13198790
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||   ||||||||||||||||    
T  13198676 attttgcaccccatctttttgccccctttctgattttgcacctcatctttgtgttcaattgcacttttgtcccttatcttttttctaattgtgcgatttt 13198775  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  13198776 gcaccctcacttata 13198790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 16555799 - 16555695
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||    
T  16555799 attttgcaccccatctttttgccccctttctgattttacaccccatctttgtgttcaattgcacttttcccccttatctttttgctaattgtgcgatttt 16555700  T
Q  315 gcacc 319  Q
    |||||    
T  16555699 gcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 5206250 - 5206138
Alignment:
Q  206 aattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattg 305  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||  ||||||||    
T  5206250 aattgtgcgattttgcaccctatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttcttccccctatctttttgctaattg 5206151  T
Q  306 tgcgattttgcac 318  Q
    |||||||||||||    
T  5206150 tgcgattttgcac 5206138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 22681652 - 22681765
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  22681652 attttgcaccccatctttttgcccc-tttctaattttgcaccccatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtgcgatttt 22681750  T
Q  315 gcaccctcacttata 329  Q
    ||||  |||||||||    
T  22681751 gcacattcacttata 22681765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 212 - 318
Target Start/End: Original strand, 35393545 - 35393651
Alignment:
Q  212 gcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgat 311  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||||  ||||||||||||||    
T  35393545 gcaattttgcaccccatctttttaccccctttttgattttgcaccctatctttgtgttcaattgaacttttgccccctatctttttgctaattgtgcgat 35393644  T
Q  312 tttgcac 318  Q
    |||||||    
T  35393645 tttgcac 35393651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 6373443 - 6373379
Alignment:
Q  8 atttttatagatgtttttctttggaaagagtgactaacattatttgttaaacatatttgttcttg 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6373443 atttttatagatgtttttctttggaaagagtgactaacattatttgttaaacatatttgttcttg 6373379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 8488278 - 8488363
Alignment:
Q  237 cccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccctc 322  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||  ||||||||||| |||||||||||||    
T  8488278 cccctttctgattttgcaccccgtctttgtgttcaattgcacttttgccccctatgtttttgctaattgtgcaattttgcaccctc 8488363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 231 - 320
Target Start/End: Complemental strand, 27304983 - 27304894
Alignment:
Q  231 ttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    ||||||||| |||||||||||||||||||| |||| |||||||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  27304983 ttttgccccttttctgattttgcaccccatatttgagttcaattgcactttttccccctatctttttgctaattgtgcgattttgcaccc 27304894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 3930284 - 3930179
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaat 491  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||| |||||| ||||||||||||||||| ||||||    
T  3930284 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcataattaataaaagataggggaaaaagtgcaat 3930185  T
Q  492 taagcc 497  Q
    ||||||    
T  3930184 taagcc 3930179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 11241494 - 11241389
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagat-aggggaaaaaatgcaat 491  Q
    ||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||| ||| | |||| ||||||    
T  11241494 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaagaggggatgcaaaatcgcacaattaacaaaagataaggaggaaaagtgcaat 11241395  T
Q  492 taagcc 497  Q
    ||||||    
T  11241394 taagcc 11241389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 394 - 500
Target Start/End: Original strand, 13198854 - 13198963
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaa 490  Q
    ||||||||| ||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||||||||||| |||| |||| |||||    
T  13198854 acaaaacacggttggcaaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaa 13198953  T
Q  491 ttaagccttt 500  Q
    ||||||||||    
T  13198954 ttaagccttt 13198963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 3930480 - 3930534
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  3930480 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcct 3930534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 443 - 500
Target Start/End: Complemental strand, 8488243 - 8488185
Alignment:
Q  443 aggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagccttt 500  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  8488243 aggggtgcaaaatcgcacaattaacaaaagatatggaaaaaaaatgcaattaagccttt 8488185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 395 - 500
Target Start/End: Original strand, 35393726 - 35393832
Alignment:
Q  395 caaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatta 493  Q
    ||||||||| ||| |||||||| ||||||||||||||||        |||||| |||||| ||||||||||| ||||||||||||  |||| ||||||||    
T  35393726 caaaacacaattgacaaaagatggggtgcaaaatcgctcataaaaaagagggggtgcaaattcgcacaattagcaaaagatagggtgaaaagtgcaatta 35393825  T
Q  494 agccttt 500  Q
    |||||||    
T  35393826 agccttt 35393832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 320
Target Start/End: Original strand, 49178636 - 49178693
Alignment:
Q  263 ttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    ||||||||||||||||||||||||| |||||||  || ||||||||||||||||||||    
T  49178636 ttgtgttcaattgcacttttgccccctatctttttgccaattgtgcgattttgcaccc 49178693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 503
Target Start/End: Complemental strand, 54508918 - 54508809
Alignment:
Q  396 aaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngag-gggtgcaaaatcgcacaattaacaaaagatagg-ggaaaaaatgcaatta 493  Q
    |||||||| || ||||||||||||||||||||||||||        ||| |||||||||||| |||||||  |||||||| || ||||||| ||||||||    
T  54508918 aaaacacaatttgcaaaagatagggtgcaaaatcgctcaaaaaaaagagagggtgcaaaatcacacaattggcaaaagattggaggaaaaagtgcaatta 54508819  T
Q  494 agcctttaat 503  Q
    ||||||||||    
T  54508818 agcctttaat 54508809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 498
Target Start/End: Complemental strand, 16555569 - 16555514
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagat-aggggaaaaaatgcaattaagcct 498  Q
    ||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  16555569 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcct 16555514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 500
Target Start/End: Original strand, 24775783 - 24775840
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagg-ggaaaaaatgcaattaagccttt 500  Q
    ||||||||||||||||||||| |||||||||||| || |||| |||||||||||||||    
T  24775783 ggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagccttt 24775840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 500
Target Start/End: Complemental strand, 36095871 - 36095814
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagccttt 500  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||    
T  36095871 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccttt 36095814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 496
Target Start/End: Complemental strand, 22681628 - 22681576
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagc 496  Q
    ||||||||||||||||||||| ||||||||||||||  ||| |||||||||||    
T  22681628 ggggtgcaaaatcgcacaattgacaaaagataggggggaaagtgcaattaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 497
Target Start/End: Original strand, 7603422 - 7603472
Alignment:
Q  447 gtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||   ||||||||||||||||| ||||||||||||    
T  7603422 gtgcaaaatcgcacaattgtaaaaagataggggaaaaagtgcaattaagcc 7603472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 16555817 - 16555871
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagat-aggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||| |||||||| ||||| |||| ||||||||||||    
T  16555817 ggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 500
Target Start/End: Original strand, 293217 - 293274
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagccttt 500  Q
    ||||||||||||||||||||| |||||  ||| ||||||||| |||||||||||||||    
T  293217 ggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagccttt 293274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 531
Target Start/End: Complemental strand, 6373263 - 6373230
Alignment:
Q  498 tttaatcttagtaaattagctattttaatcaaat 531  Q
    ||||||||||||||||||||||||||||||||||    
T  6373263 tttaatcttagtaaattagctattttaatcaaat 6373230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 16555866 - 16555818
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  16555866 aattgcacttttcccccttatctttt-gctaattgtgcgattttgcaccc 16555818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 446 - 498
Target Start/End: Original strand, 22681881 - 22681934
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagatagg-ggaaaaaatgcaattaagcct 498  Q
    |||||||||| ||||||||||||||||||||| || |||| |||||||||||||    
T  22681881 ggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaagcct 22681934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 496
Target Start/End: Complemental strand, 43292091 - 43292038
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaa-tgcaattaagc 496  Q
    ||||||||||||||||||||| |||||  ||||||||||||| |||||||||||    
T  43292091 ggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaagc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 493
Target Start/End: Original strand, 49178763 - 49178866
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnnga---ggggtgcaaaatcgcacaattaacaaaagatagggga-aaaaatgca 489  Q
    |||||||||| |||||||||||| ||||||||||||||||         |   |||||||||||||||||||||  |||||||||||||| |||| ||||    
T  49178763 acaaaacacaattggcaaaagatggggtgcaaaatcgctccaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgca 49178862  T
Q  490 atta 493  Q
    ||||    
T  49178863 atta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 496
Target Start/End: Complemental strand, 7603197 - 7603146
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagc 496  Q
    |||||||||||| |||||||||| |||||||||||| |||| |||||||||||    
T  7603197 ggggtgcaaaattgcacaattaaaaaaagatagggg-aaaagtgcaattaagc 7603146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 18077202 - 18077258
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||| ||||| |||||||  |||| ||||||||||||||    
T  18077202 ggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcctt 18077258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 503
Target Start/End: Original strand, 26207746 - 26207806
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggga-aaaaatgcaattaagcctttaat 503  Q
    |||||||||||||||||||||  ||||  |||||||  |||||||||||||||||||||||    
T  26207746 ggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcctttaat 26207806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 43051252 - 43051308
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcctt 499  Q
    ||||||||||||| |||||||  |||||||||||||  |||||||||||||||||||    
T  43051252 ggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcctt 43051308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 54509116 - 54509167
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagatagggg--aaaaaatgcaattaa 494  Q
    ||||||||||||||||||||| ||||| |||||||  |||||||||||||||    
T  54509116 gggtgcaaaatcgcacaattagcaaaaaatagggggaaaaaaatgcaattaa 54509167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Original strand, 3844431 - 3844470
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc 433  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  3844431 acaaaacacaattggcaaaagatggggtgcaaaatcgctc 3844470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 498
Target Start/End: Complemental strand, 5206042 - 5205987
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggg-gaaaaaatgcaattaagcct 498  Q
    |||||||||||||||  |||||||||||||||||| | |||| |||||||||||||    
T  5206042 ggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaagcct 5205987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 496
Target Start/End: Original strand, 8488431 - 8488534
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatt 492  Q
    |||||| ||| ||| |||||||| ||||||||||||||||        |||||| ||||||||||||||||||  |||||||| ||  |||| |||||||    
T  8488431 acaaaatacaattgacaaaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattagaaaaagataaggcgaaaagtgcaatt 8488530  T
Q  493 aagc 496  Q
    ||||    
T  8488531 aagc 8488534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 483
Target Start/End: Complemental strand, 27304770 - 27304731
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaa 483  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  27304770 ggggtgcaaaatcgcacaattagcagaagataggggaaaa 27304731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 483
Target Start/End: Complemental strand, 39415330 - 39415239
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gag-gggtgcaaaatcgcacaattaacaaaagataggggaaaa 483  Q
    |||||||||| ||| |||||||| ||||||||||||||||         ||| ||||||||||||||||||||| |||||||||||| ||||    
T  39415330 acaaaacacaattgacaaaagatggggtgcaaaatcgctcaaataaaaagagagggtgcaaaatcgcacaattagcaaaagatagggaaaaa 39415239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 498
Target Start/End: Complemental strand, 50678833 - 50678778
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||  |||||||||||||  |||| |||||||||||||    
T  50678833 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 50678778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 498
Target Start/End: Complemental strand, 56505747 - 56505692
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||  ||||||||| |||| |||| |||||||||||||    
T  56505747 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 56505692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 169439 - 169493
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| |||||  ||| |||| |||||||||||||||||    
T  169439 ggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 169493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 11241661 - 11241715
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    ||||||||||||| |||||||  ||||||||||||| |||| | |||||||||||    
T  11241661 ggggtgcaaaatcccacaattggcaaaagatagggggaaaagtacaattaagcct 11241715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 497
Target Start/End: Original strand, 5206231 - 5206283
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagat-aggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  5206231 gggtgcaaaatcgcacaattaa-aaaagataagggggaaaagtgcaattaagcc 5206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 8181996 - 8182045
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    ||||||||||||||||| |||| ||  || ||||||||||||||||||||    
T  8181996 aattgcacttttgccccctatcgttttgccaattgtgcgattttgcaccc 8182045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 16555520 - 16555568
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  16555520 aattgcacttttcccccttatcttt-tgttaattgtgcgattttgcaccc 16555568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 494
Target Start/End: Original strand, 47219203 - 47219252
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagatag-gggaaaaaatgcaattaa 494  Q
    |||||||||||||||||||| |||||||||| ||  ||||||||||||||    
T  47219203 ggtgcaaaatcgcacaattagcaaaagatagaggtgaaaaatgcaattaa 47219252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 9023680 - 9023736
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||||||||||| |||||  ||| |||| |||| ||||||||||||||    
T  9023680 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 9023736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 103; Significance: 5e-51; HSPs: 3)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 1402 - 1288
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  1402 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcgatttt 1303  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  1302 gcaccctcacttata 1288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 1224 - 1118
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaa 490  Q
    |||||||||| |||||||||||||||||||||||||||||         |||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  1224 acaaaacacaattggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaa 1125  T
Q  491 ttaagcc 497  Q
    |||||||    
T  1124 ttaagcc 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 1420 - 1474
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  ||||||||| ||||||||| ||||||||||||    
T  1420 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 5e-51; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 15156167 - 15156053
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  15156167 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcgatttt 15156068  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  15156067 gcaccctcacttata 15156053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 12281196 - 12281310
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  12281196 attttgcaccccatctttttgccccctttcagattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaactgtgcgatttt 12281295  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  12281296 gcaccctcacttata 12281310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 215 - 319
Target Start/End: Original strand, 37752186 - 37752290
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  37752186 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcgatttt 37752285  T
Q  315 gcacc 319  Q
    |||||    
T  37752286 gcacc 37752290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 765806 - 765920
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||    
T  765806 attttgcaccccatctttttgccccctttcagattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaaccgtgcgatttt 765905  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  765906 gcaccctcacttata 765920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 213 - 329
Target Start/End: Complemental strand, 43162521 - 43162405
Alignment:
Q  213 caattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatt 312  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  43162521 caattttgcacctcatctttttgtcccctttctgattttgcaccccatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtgcgatt 43162422  T
Q  313 ttgcaccctcacttata 329  Q
    ||||| |||||||||||    
T  43162421 ttgcatcctcacttata 43162405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 215 - 319
Target Start/End: Original strand, 43245943 - 43246047
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  43245943 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattacacttttgccccttatctttttgctaattgtgcgatttt 43246042  T
Q  315 gcacc 319  Q
    |||||    
T  43246043 gcacc 43246047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 34314046 - 34313932
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||  ||||||||| |||||||    
T  34314046 attttgcaccccatctttttgccccttttctgattttgcacctcatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtacgatttt 34313947  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  34313946 gcaccctcacttata 34313932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 41662385 - 41662271
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  41662385 attttgcaccccatctttttgccccctttctgattttgcaccttatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcgatttt 41662286  T
Q  315 gcaccctcacttata 329  Q
     |||| |||||||||    
T  41662285 acaccttcacttata 41662271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 216 - 319
Target Start/End: Original strand, 16929013 - 16929115
Alignment:
Q  216 ttttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttg 315  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  | |||||||| |||||||    
T  16929013 ttttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgtt-aattgcacttttgccccttatctttttgttaattgtgagattttg 16929111  T
Q  316 cacc 319  Q
    ||||    
T  16929112 cacc 16929115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 231 - 320
Target Start/End: Original strand, 18019875 - 18019964
Alignment:
Q  231 ttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||   ||||||||||||||||||||||    
T  18019875 ttttgccccctttctgattttgcaccgcatctttgtgttcaattgcacttttgccccctatctttttcctaattgtgcgattttgcaccc 18019964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 74967 - 74864
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||||||  |  ||||||||||||||    
T  74967 attttgcaccccatctttttgccccctttctgattttgcaccacatctttgtgtttaattgcacttttgtcccctatctttttgtcaattgtgcgatttt 74868  T
Q  315 gcac 318  Q
    ||||    
T  74867 gcac 74864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 7127940 - 7127828
Alignment:
Q  208 ttgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtg 307  Q
    |||||| ||||||||||| ||| |||| |||| |||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||  |||||||| |    
T  7127940 ttgtgcgattttgcaccctatctttttaccccttttctgattttgcatcccatttttgtgttcaattgcacttttaccccctatctttttgctaattgcg 7127841  T
Q  308 cgattttgcaccc 320  Q
     ||||||||||||    
T  7127840 tgattttgcaccc 7127828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 326
Target Start/End: Original strand, 9465675 - 9465755
Alignment:
Q  246 gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccctcactt 326  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||  ||||| ||||||||||||||||| |||||    
T  9465675 gattttgcaccctatctttgtgttcaattgcacttttgccccctatctttttgctaactgtgcgattttgcacccccactt 9465755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 34313868 - 34313765
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatt 492  Q
    ||||||||||||| ||||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||||| |||| |||||||    
T  34313868 acaaaacacagtttgcaaaagatagggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatagggg-aaaagtgcaatt 34313770  T
Q  493 aagcc 497  Q
    |||||    
T  34313769 aagcc 34313765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 394 - 498
Target Start/End: Complemental strand, 15155989 - 15155882
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaa 490  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||||||||||| |||| |||| |||||    
T  15155989 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaa 15155890  T
Q  491 ttaagcct 498  Q
    ||||||||    
T  15155889 ttaagcct 15155882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 320
Target Start/End: Complemental strand, 37670221 - 37670132
Alignment:
Q  231 ttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||| |||||  || ||| |||  |||||||||| ||||||||||||    
T  37670221 ttttgccccctttctgatttagcaccccatctttgtgtttaattgcatttttgtaccatatttttttgctaattgtgtgattttgcaccc 37670132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 18020037 - 18020142
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatt 492  Q
    ||||||| |||||| |||||||| ||||||||||||||||        |||||| |||||||||||||||||||||||||||| ||| |||| |||||||    
T  18020037 acaaaacgcagttgccaaaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagata-gggtaaaagtgcaatt 18020135  T
Q  493 aagcctt 499  Q
    |||||||    
T  18020136 aagcctt 18020142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 320
Target Start/End: Complemental strand, 33748236 - 33748161
Alignment:
Q  247 attttgcaccccatctttgtgttcaattgcacttttgcccctta--tctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||| |||||||||||||||||||||||||||||| ||  | |||  |||||||||||||||||||||||    
T  33748236 attttgcacctcatctttgtgttcaattgcacttttgccccctatttttttttgctaattgtgcgattttgcaccc 33748161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 41662213 - 41662105
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaa 490  Q
    |||||||||||||||||||||||| ||||||||||||||          |||||| |||||||||||||||||||||||||||| ||||||||  |||||    
T  41662213 acaaaacacagttggcaaaagatatggtgcaaaatcgcttaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtgcaa 41662114  T
Q  491 ttaagcctt 499  Q
    |||||||||    
T  41662113 ttaagcctt 41662105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 444 - 494
Target Start/End: Original strand, 9465874 - 9465923
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9465874 ggggtgcaaaatcgcacaattaacaaaagata-gggaaaaaatgcaattaa 9465923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 12281374 - 12281480
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagat-aggggaaaaaatgcaa 490  Q
    |||||||||||||| |||||||||||||| ||||||||||         |||||| ||||||||||||||||||||||||||| ||||| |||| |||||    
T  12281374 acaaaacacagttgacaaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaa 12281473  T
Q  491 ttaagcc 497  Q
    |||||||    
T  12281474 ttaagcc 12281480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 16929191 - 16929296
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagatagggga-aaaaatgcaat 491  Q
    |||||||||| ||| |||||||| ||||||||||||| ||        |||||| |||||||||||||||||| |||||||||||||| |||| ||||||    
T  16929191 acaaaacacaattgacaaaagatggggtgcaaaatcgttcaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaat 16929290  T
Q  492 taagcc 497  Q
    ||||||    
T  16929291 taagcc 16929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 37752365 - 37752470
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaat 491  Q
    |||||||||| ||| ||||| || ||||||||||||||||        |||||| |||||||||||||||||||||||||||| |||| |||| ||||||    
T  37752365 acaaaacacaattgacaaaatatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaat 37752464  T
Q  492 taagcc 497  Q
    ||||||    
T  37752465 taagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 43162341 - 43162234
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn---gagg-ggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgca 489  Q
    |||||||||| ||| |||||||||||||||||||||||||           |||| |||||||||||||||||||||||||| ||||||| |||| ||||    
T  43162341 acaaaacacaattgacaaaagatagggtgcaaaatcgctcaaaaaaaaaaagaggaggtgcaaaatcgcacaattaacaaaatatagggggaaaagtgca 43162242  T
Q  490 attaagcc 497  Q
    ||||||||    
T  43162241 attaagcc 43162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 433
Target Start/End: Original strand, 765983 - 766022
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc 433  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  765983 acaaaacacagttggcaaaagatagggtgcaaaatcgctc 766022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 498
Target Start/End: Complemental strand, 33748089 - 33747983
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc-nnnnnnnngag-gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaat 491  Q
    |||||||||| |||||||||||||||||||||||||||||         ||| || ||||||||| |||||||| ||||||||| || ||||| ||||||    
T  33748089 acaaaacacaattggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagcggatgcaaaatcacacaattagcaaaagatatggaaaaaagtgcaat 33747990  T
Q  492 taagcct 498  Q
    |||||||    
T  33747989 taagcct 33747983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 43245925 - 43245871
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||    
T  43245925 ggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaagcc 43245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 499
Target Start/End: Complemental strand, 6092825 - 6092775
Alignment:
Q  448 tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  6092825 tgcaaaatcgcacaattgacaaaagatagggg-gaaaatgcaattaagcctt 6092775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 494
Target Start/End: Complemental strand, 9930633 - 9930550
Alignment:
Q  407 ggcaaaagatagggtgcaaaatcgctcnnnnnnnngaggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    |||||||||||||||||||||||||||         | ||||||| |||||||||||||||||||||||  ||||||||| |||||||    
T  9930633 ggcaaaagatagggtgcaaaatcgctcaaaaa----aagggtgcacaatcgcacaattaacaaaagataaaggaaaaaatacaattaa 9930550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 13936776 - 13936721
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||   |||||||||||| |||| ||||||||||||||    
T  13936776 ggggtgcaaaatcgcacaattggtaaaagatagggggaaaagtgcaattaagcctt 13936721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 25439126 - 25439181
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||||||||||| |||||  |||||||||||| ||||||||| ||||    
T  25439126 ggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaaacctt 25439181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 448 - 497
Target Start/End: Complemental strand, 3307388 - 3307338
Alignment:
Q  448 tgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcc 497  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  3307388 tgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaagcc 3307338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 498
Target Start/End: Complemental strand, 3463694 - 3463641
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    |||||||||||| |||||||||||||||||||||||  |||||| ||||||||||    
T  3463694 ggggtgcaaaattgcacaattaacaaaagatagggg-gaaaatgtaattaagcct 3463641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 15156185 - 15156239
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||||||||||||    
T  15156185 ggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaagcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 22851444 - 22851390
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| ||||||||||||||  |||| ||||||||||||    
T  22851444 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagcc 22851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 495
Target Start/End: Complemental strand, 74789 - 74688
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngaggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatta 493  Q
    |||||||||| || |||||||||  ||||||||||||||          ||||||||||||||||||||||| |||||||| | || |||| ||||||||    
T  74789 acaaaacacaattagcaaaagatgaggtgcaaaatcgctaaaaaaaaaaaggggtgcaaaatcgcacaattagcaaaagatggagggaaaagtgcaatta 74690  T
Q  494 ag 495  Q
    ||    
T  74689 ag 74688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 493
Target Start/End: Original strand, 43162539 - 43162588
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatta 493  Q
    ||||||||||||||||| ||| |||||||||||||| |||| ||||||||    
T  43162539 ggggtgcaaaatcgcacgattgacaaaagatagggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 245 - 310
Target Start/End: Original strand, 43597892 - 43597957
Alignment:
Q  245 tgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcga 310  Q
    |||||||||| | || |||||||||||||||  |||||||||| |||||||  |||||||||||||    
T  43597892 tgattttgcatctcaactttgtgttcaattgtgcttttgccccctatctttttgctaattgtgcga 43597957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 482
Target Start/End: Original strand, 43598756 - 43598793
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaaa 482  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  43598756 gggtgcaaaatcgcacaattagcaaaagataggggaaa 43598793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 498
Target Start/End: Original strand, 767720 - 767760
Alignment:
Q  458 cacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  767720 cacaattaacaaaagatagggggaaaagtgcaattaagcct 767760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 9823361 - 9823417
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||  |||||||||||||  |||| ||||||||||||||    
T  9823361 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 9823417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 43246176 - 43246232
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||| |||||||| ||||||||| |||| |||| ||||||||||||||    
T  43246176 ggggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaagcctt 43246232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 499
Target Start/End: Original strand, 7127923 - 7127978
Alignment:
Q  445 gggtgcaaaatcgcacaa-ttaacaaaagataggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||| ||| |||||||||||| ||||| ||||||||| ||||    
T  7127923 gggtgcaaaatcgcacaaattagcaaaagatagggaaaaaagtgcaattaaacctt 7127978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 500
Target Start/End: Complemental strand, 12281176 - 12281121
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagccttt 500  Q
    |||||||||||||||||||  ||||||||| |||| |||| |||||||||||||||    
T  12281176 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccttt 12281121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 479
Target Start/End: Complemental strand, 16928996 - 16928961
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg 479  Q
    |||||||||||||||||||||| |||||||||||||    
T  16928996 ggggtgcaaaatcgcacaattagcaaaagatagggg 16928961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 22786930 - 22786989
Alignment:
Q  263 ttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccctc 322  Q
    ||||||| ||||||||||||||||||||||| |  |  | ||||||||||||||||||||    
T  22786930 ttgtgtttaattgcacttttgccccttatctatttgtcagttgtgcgattttgcaccctc 22786989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 490
Target Start/End: Complemental strand, 7127702 - 7127660
Alignment:
Q  448 tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaa 490  Q
    |||||||||||||||||| ||||||||||||| |||| |||||    
T  7127702 tgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaa 7127660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 9822802 - 9822748
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| | ||||||||||||  |||| ||||||||||||    
T  9822802 ggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagcc 9822748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 11007613 - 11007563
Alignment:
Q  447 gtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||| ||||||||||  | ||||||| |||||||||    
T  11007613 gtgcaaaatcgcacaattagcaaaagatagcaggaaaaatgtaattaagcc 11007563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 23123392 - 23123338
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagg-ggaaaaaatgcaattaagcc 497  Q
    |||||| |||||||||||||| |||||||||||| || |||| ||||||||||||    
T  23123392 ggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 23123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 432
Target Start/End: Complemental strand, 37670059 - 37670021
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgct 432  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  37670059 acaaaacacaattggcaaaagatggggtgcaaaatcgct 37670021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 37752138 - 37752084
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| ||||||||||||    
T  37752138 ggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 39724048 - 39724102
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  |||||||||||||  |||| ||||||||||||    
T  39724048 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 41662403 - 41662457
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  ||||||||| |||| |||| ||||||||||||    
T  41662403 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 500
Target Start/End: Complemental strand, 9465653 - 9465604
Alignment:
Q  451 aaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagccttt 500  Q
    ||||| |||||||| |||||||||||| | |||| |||||||||||||||    
T  9465653 aaaattgcacaattgacaaaagataggaggaaaagtgcaattaagccttt 9465604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 12281475 - 12281427
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  12281475 aattgcacttttcccccttatctttt-gttaattgtgcgattttgcaccc 12281427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 498
Target Start/End: Complemental strand, 13026687 - 13026634
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||  |||||||||||||  |||| |||||||||||||    
T  13026687 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 13026634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 23123517 - 23123573
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagccttta 501  Q
    |||||||||||||||||||||| ||||||||| |||  ||| |||||||||| |||||    
T  23123517 ggggtgcaaaatcgcacaattagcaaaagataaggg-gaaagtgcaattaagtcttta 23123573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 476
Target Start/End: Original strand, 74984 - 75016
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatag 476  Q
    |||||||||||||||||||||| ||||||||||    
T  74984 ggggtgcaaaatcgcacaattagcaaaagatag 75016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 495
Target Start/End: Complemental strand, 765788 - 765736
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaag 495  Q
    |||||||||||||||||||||  ||||||||| |||| |||| ||||||||||    
T  765788 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 447 - 475
Target Start/End: Original strand, 9930842 - 9930870
Alignment:
Q  447 gtgcaaaatcgcacaattaacaaaagata 475  Q
    |||||||||||||||||||||||||||||    
T  9930842 gtgcaaaatcgcacaattaacaaaagata 9930870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 11007651 - 11007707
Alignment:
Q  263 ttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcacc 319  Q
    ||||||| |||||||||||||| || |||||||  || |||||||||||||| ||||    
T  11007651 ttgtgtttaattgcacttttgctccctatctttttgccaattgtgcgattttacacc 11007707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 503
Target Start/End: Original strand, 13937389 - 13937449
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaa-tgcaattaagcctttaat 503  Q
    |||||||||| |||||||||| |||||| |||||||  |||| ||||||||||||| ||||    
T  13937389 ggggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagcctataat 13937449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 20861638 - 20861694
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||  || |  ||| ||||||||||||||||||||||||    
T  20861638 ggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaagcctt 20861694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 5e-51; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 199 - 329
Target Start/End: Complemental strand, 8109020 - 8108890
Alignment:
Q  199 ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcag 298  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||  |    
T  8109020 ttttgccaattgtgcgattttgcaccccatctttttgccccctttttgattttgcaccccatctttgtgttcaattgcacttttgccccatatctttttg 8108921  T
Q  299 ctaattgtgcgattttgcaccctcacttata 329  Q
    |||||||||||||||| ||||||||||||||    
T  8108920 ctaattgtgcgattttacaccctcacttata 8108890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 212 - 329
Target Start/End: Complemental strand, 17518588 - 17518472
Alignment:
Q  212 gcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgat 311  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  17518588 gcaattttgcaccc-atctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcgat 17518490  T
Q  312 tttgcaccctcacttata 329  Q
    ||||||||||||||||||    
T  17518489 tttgcaccctcacttata 17518472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 41082980 - 41083094
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||||||||    
T  41082980 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgtacttttgccccttatctttttactaattgtgcgatttt 41083079  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  41083080 gcaccctcacttata 41083094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 47955378 - 47955492
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  47955378 attttgcaccccatctttttgccccctttctgattttgcacctcatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtgcgatttt 47955477  T
Q  315 gcaccctcacttata 329  Q
    ||||||||| |||||    
T  47955478 gcaccctcaattata 47955492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 22149683 - 22149580
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||    
T  22149683 attttgcaccccatctttttgcccc-tttctgattttgcaccccatctttgtgtttaattgcacttttgccccttatctttttgctaattgtgcgatttt 22149585  T
Q  315 gcacc 319  Q
    |||||    
T  22149584 gcacc 22149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 394 - 494
Target Start/End: Complemental strand, 8108826 - 8108724
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnnga-ggggtgcaaaatcgcacaattaacaaaagataggg-gaaaaaatgcaat 491  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||| | |||| ||||||    
T  8108826 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaaagggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaat 8108727  T
Q  492 taa 494  Q
    |||    
T  8108726 taa 8108724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 394 - 498
Target Start/End: Complemental strand, 17518408 - 17518302
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc-nnnnnnnnga-ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaat 491  Q
    ||||||||||||||||||||||||||||||||||||||||         || |||||||||||||||||||||||||||||||| ||| |||  ||||||    
T  17518408 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataaggggaaaggtgcaat 17518309  T
Q  492 taagcct 498  Q
    |||||||    
T  17518308 taagcct 17518302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 394 - 498
Target Start/End: Original strand, 47955556 - 47955663
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc-nnnnnnnnga-ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaa 490  Q
    ||||||||||||||||||||||||||||||||||||||||         || ||||||||||||||||||||||| |||||||| |||| |||| |||||    
T  47955556 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaa 47955655  T
Q  491 ttaagcct 498  Q
    ||||||||    
T  47955656 ttaagcct 47955663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 394 - 503
Target Start/End: Original strand, 31848142 - 31848252
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngaggggtgcaaaatcgcacaattaacaaaagatagggga-aaaaatgcaatt 492  Q
    |||||||||| ||| |||||||| ||||||||||||||||          |||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  31848142 acaaaacacaattgacaaaagatggggtgcaaaatcgctcgaaaaaagagggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaatt 31848241  T
Q  493 aagcctttaat 503  Q
    |||||| ||||    
T  31848242 aagcctataat 31848252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 13589659 - 13589716
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagccttta 501  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  13589659 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagccttta 13589716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 41083211 - 41083265
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||||||||||    
T  41083211 ggggtgcaaaatcgcacaactaacaaaagatagggggaaaagtgcaattaagcct 41083265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 501
Target Start/End: Complemental strand, 22149506 - 22149399
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatt 492  Q
    ||||| |||| ||| |||||||| ||||||||||||||||        |||||| |||||||||||||||||| |||| |||||||| |||| |||||||    
T  22149506 acaaagcacaattgacaaaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattaccaaa-gatagggggaaaagtgcaatt 22149408  T
Q  493 aagccttta 501  Q
    |||||||||    
T  22149407 aagccttta 22149399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 505
Target Start/End: Complemental strand, 1176804 - 1176709
Alignment:
Q  410 aaaagatagggtgcaaaatcgctcnnnnnnnngaggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctttaatct 505  Q
    |||||||||||||||||||||||         ||||| |||||||||||||||||| ||||| |||||||  ||| |||||||||||| |||||||    
T  1176804 aaaagatagggtgcaaaatcgctaaaaaaaaagagggatgcaaaatcgcacaattagcaaaatataggggggaaagtgcaattaagccattaatct 1176709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 495
Target Start/End: Original strand, 17518602 - 17518653
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaag 495  Q
    |||||||||||||||||||||  ||||||||||||| |||| ||||||||||    
T  17518602 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 20480221 - 20480166
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||||||||||| |||||  ||||||| |||| ||||||||||||||    
T  20480221 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcctt 20480166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 49284463 - 49284405
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagccttta 501  Q
    |||||||||||||||||||||  |||||||||||||  |||| ||||||||||||||||    
T  49284463 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccttta 49284405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 500
Target Start/End: Original strand, 8108993 - 8109050
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagccttt 500  Q
    |||||||||||||||||||||  ||||||||| |||| |||| |||||||||||||||    
T  8108993 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccttt 8109050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 500
Target Start/End: Original strand, 39692000 - 39692057
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagccttt 500  Q
    ||||||||||||||||||||| |||||| ||| |||| |||| |||||||||||||||    
T  39692000 ggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagccttt 39692057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 50615621 - 50615674
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| |||||  ||||||| |||| ||||||||||||    
T  50615621 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 50623449 - 50623502
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| |||||  ||||||| |||| ||||||||||||    
T  50623449 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 501
Target Start/End: Original strand, 22149701 - 22149757
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagccttta 501  Q
    |||||||||||||||||||| ||||||||| |||| |||| ||||||||| ||||||    
T  22149701 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaaaccttta 22149757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 47955360 - 47955304
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||  ||||||||| |||| |||| ||||||||||||||    
T  47955360 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctt 47955304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 317
Target Start/End: Original strand, 31847966 - 31848067
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattt--tgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatt 312  Q
    ||||||||||| ||| |||||||||||||||| |||  || |||   |  ||||||| ||||||||||||||||  |||||||  || ||||||||||||    
T  31847966 attttgcacccgatctttttgccccctttctggtttgatggacc---ttcttgtgtttaattgcacttttgccctctatctttttgccaattgtgcgatt 31848062  T
Q  313 ttgca 317  Q
    |||||    
T  31848063 ttgca 31848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 48190798 - 48190848
Alignment:
Q  199 ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattt 250  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||| ||||    
T  48190798 ttttgccaattgtgcgattttgcaccccat-ctttttccccctttctaattt 48190848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 6002291 - 6002237
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcc 497  Q
    ||||||||||||| ||||||| ||||||||||||||  |||| ||||||||||||    
T  6002291 ggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagcc 6002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 432
Target Start/End: Original strand, 41083158 - 41083196
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgct 432  Q
    |||||||||||||||||||| || |||||||||||||||    
T  41083158 acaaaacacagttggcaaaatattgggtgcaaaatcgct 41083196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 48190825 - 48190771
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  |||||||||||||  |||| ||||||||||||    
T  48190825 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 48190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 442 - 499
Target Start/End: Original strand, 48313790 - 48313848
Alignment:
Q  442 gaggggtgcaaaatcgcacaattaacaaaagat-aggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||| ||||||||| |||||||| | |||||||| | ||||||||||||    
T  48313790 gaggggtgcaaaattgcacaattagcaaaagataatgggaaaaagtacaattaagcctt 48313848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 20371353 - 20371406
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  ||||  ||||||| |||| ||||||||||||    
T  20371353 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 24671281 - 24671318
Alignment:
Q  197 ttttttgccaattgtgcaattttgcaccccatcctttt 234  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  24671281 ttttttgccaattgtgcgattttgcactccatcctttt 24671318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 27172169 - 27172116
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  ||||  ||||||| |||| ||||||||||||    
T  27172169 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 27172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 497
Target Start/End: Original strand, 49318447 - 49318496
Alignment:
Q  448 tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||| | |||  ||||||| |||||||||||||||||    
T  49318447 tgcaaaatcgcacaattgataaactatagggggaaaaatgcaattaagcc 49318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 4692459 - 4692431
Alignment:
Q  200 tttgccaattgtgcaattttgcaccccat 228  Q
    |||||||||||||||||||||||||||||    
T  4692459 tttgccaattgtgcaattttgcaccccat 4692431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 6703920 - 6703892
Alignment:
Q  200 tttgccaattgtgcaattttgcaccccat 228  Q
    |||||||||||||||||||||||||||||    
T  6703920 tttgccaattgtgcaattttgcaccccat 6703892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 9347577 - 9347549
Alignment:
Q  200 tttgccaattgtgcaattttgcaccccat 228  Q
    |||||||||||||||||||||||||||||    
T  9347577 tttgccaattgtgcaattttgcaccccat 9347549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 497
Target Start/End: Original strand, 20480613 - 20480665
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||  ||||  ||||||| |||| ||||||||||||    
T  20480613 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20480665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 22149748 - 22149701
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcacc 319  Q
    |||||||||||| |||| |||||||  ||||||||||||||||||||||    
T  22149748 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 32162757 - 32162785
Alignment:
Q  200 tttgccaattgtgcaattttgcaccccat 228  Q
    |||||||||||||||||||||||||||||    
T  32162757 tttgccaattgtgcaattttgcaccccat 32162785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 39690825 - 39690872
Alignment:
Q  203 gccaattgtgcaattttgcaccccatccttttgccccctttctgatttt 251  Q
    ||||||||||| ||||||||||| |||||||| | ||||||||||||||    
T  39690825 gccaattgtgcgattttgcaccctatcctttt-ctccctttctgatttt 39690872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 450 - 494
Target Start/End: Original strand, 46057199 - 46057243
Alignment:
Q  450 caaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    |||||| ||| ||||| |||||||||||||||||| |||||||||    
T  46057199 caaaattgcataattagcaaaagataggggaaaaagtgcaattaa 46057243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 46824304 - 46824276
Alignment:
Q  200 tttgccaattgtgcaattttgcaccccat 228  Q
    |||||||||||||||||||||||||||||    
T  46824304 tttgccaattgtgcaattttgcaccccat 46824276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 496
Target Start/End: Original strand, 47498495 - 47498547
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagc 496  Q
    ||||||||||| ||||||||| |||||  ||||||| |||| |||||||||||    
T  47498495 ggggtgcaaaaccgcacaattgacaaactatagggggaaaagtgcaattaagc 47498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 48191382 - 48191333
Alignment:
Q  199 ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattt 250  Q
    |||||||||| |||| |||||||||||||||  ||| |||||||||||||||    
T  48191382 ttttgccaatggtgcgattttgcaccccatc--ttttccccctttctgattt 48191333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 2e-50; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 212 - 329
Target Start/End: Complemental strand, 6171442 - 6171325
Alignment:
Q  212 gcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgat 311  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  6171442 gcaattttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgttaattgtgcgat 6171343  T
Q  312 tttgcaccctcacttata 329  Q
    ||||||||||||||||||    
T  6171342 tttgcaccctcacttata 6171325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 20347446 - 20347332
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  20347446 attttgcaccccatctttttgtcccctttctgattttgcaccccatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtgcgatttt 20347347  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  20347346 gcaccctcacttata 20347332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 30190995 - 30191109
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  30190995 attttgcaccccatctttttgccccctttctgattttgcacctcatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtgcgatttt 30191094  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  30191095 gcaccctcacttata 30191109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 32673125 - 32673011
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  32673125 attttgcaccccatcttttcgccctctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcgatttt 32673026  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  32673025 gcaccctcacttata 32673011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 212 - 319
Target Start/End: Original strand, 11883692 - 11883799
Alignment:
Q  212 gcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgat 311  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  11883692 gcaattttgcacctcatctttttgccccctttatgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcgat 11883791  T
Q  312 tttgcacc 319  Q
    ||||||||    
T  11883792 tttgcacc 11883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 215 - 322
Target Start/End: Complemental strand, 26737763 - 26737655
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttc-aattgcacttttgccccttatctttcagctaattgtgcgattt 313  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||  ||||||||||||||||    
T  26737763 attttacaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaaattgcacttttgccccctatctttttgctaattgtgcgattt 26737664  T
Q  314 tgcaccctc 322  Q
    |||||||||    
T  26737663 tgcaccctc 26737655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 40469711 - 40469607
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||||    
T  40469711 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttcccccttatcgttttgctaattgtgcgatttt 40469612  T
Q  315 gcacc 319  Q
    |||||    
T  40469611 gcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 15920991 - 15920911
Alignment:
Q  241 tttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccct 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||  ||||||||||||||||| ||||||    
T  15920991 tttctgattttgcaccccatctttgtgttcaattgcacttttgccccctaactttttgctaattgtgcgattttacaccct 15920911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 40221563 - 40221489
Alignment:
Q  246 gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||  |||||||||||||||||||||||    
T  40221563 gattttgcaccccatctttgtgttcaattgcgcttttgccccctatctttttgctaattgtgcgattttgcaccc 40221489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 215 - 320
Target Start/End: Original strand, 17345803 - 17345908
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||| ||| ||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||| ||| |||  | |||||||||||||||    
T  17345803 attttgcaccctatctttttggcccccttttgattttgcactccatctttgtgttcaattgcacttttgccccctatatttttgttaattgtgcgatttt 17345902  T
Q  315 gcaccc 320  Q
     |||||    
T  17345903 tcaccc 17345908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 394 - 503
Target Start/End: Complemental strand, 20347268 - 20347157
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc-nnnnnnnngaggggtgcaaaatcgcacaattaacaaaagatag-gggaaaaaatgcaat 491  Q
    ||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||| ||| |||| || |||    
T  20347268 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagaggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaat 20347169  T
Q  492 taagcctttaat 503  Q
    ||||||| ||||    
T  20347168 taagcctataat 20347157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 6171261 - 6171156
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagg--ggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaat 491  Q
    |||||||||||||||||||||||||||||||||||| |||         |    |||||||||||||||||||||||||||||||||| |||| ||||||    
T  6171261 acaaaacacagttggcaaaagatagggtgcaaaatcactcaaaaaaaaaaaaaaggtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaat 6171162  T
Q  492 taagcc 497  Q
    ||||||    
T  6171161 taagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 30191173 - 30191279
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc-nnnnnnnnga-ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaa 490  Q
    ||||||||||||||||||||||||||||||||||||||||         || ||||||||||||||||||||||| |||||||| |||| |||| |||||    
T  30191173 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaa 30191272  T
Q  491 ttaagcc 497  Q
    |||||||    
T  30191273 ttaagcc 30191279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 32672948 - 32672842
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc-nnnnnnnngag-gggtgcaaaatcgcacaattaacaaaagatagggga-aaaaatgcaa 490  Q
    ||||||||||||||||||||||||||||||||||||||||         ||| ||||||||||||||||||||||||||||||| || | |||| |||||    
T  32672948 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagagggtgcaaaatcgcacaattaacaaaagataaggaacaaaagtgcaa 32672849  T
Q  491 ttaagcc 497  Q
    |||||||    
T  32672848 ttaagcc 32672842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 32673143 - 32673200
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagccttta 501  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||||    
T  32673143 ggggtgcaaaatcgcacaattggcaaaagataggggaaaaagtgcaattaaaccttta 32673200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 477
Target Start/End: Complemental strand, 15920883 - 15920799
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagatagg 477  Q
    |||||||||| |||||||||||| ||||||||||| ||||        |||||| ||||||||||||||||||||||||||||||    
T  15920883 acaaaacacaattggcaaaagatggggtgcaaaattgctcaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatagg 15920799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 40469533 - 40469427
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagatagg-ggaaaaaatgcaa 490  Q
    |||||||||| ||| |||||||||||||||||||||||||         |||||| |||||||||||||||||| ||||||||||| || |||||| |||    
T  40469533 acaaaacacaattgacaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggagggaaaaatacaa 40469434  T
Q  491 ttaagcc 497  Q
    |||||||    
T  40469433 ttaagcc 40469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 500
Target Start/End: Complemental strand, 2638874 - 2638817
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagccttt 500  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||    
T  2638874 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccttt 2638817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 500
Target Start/End: Complemental strand, 11883677 - 11883620
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagccttt 500  Q
    |||||||||||||||||||||| ||||||||| |||| |||| |||||||||||||||    
T  11883677 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccttt 11883620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 500
Target Start/End: Original strand, 40469729 - 40469786
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagccttt 500  Q
    |||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||    
T  40469729 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaaaccttt 40469786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 498
Target Start/End: Original strand, 17346037 - 17346089
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||| |||||||||  ||||||| |||||||||||||    
T  17346037 ggtgcaaaatcgcacaattagcaaaagataaaggaaaaagtgcaattaagcct 17346089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 24832385 - 24832329
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  24832385 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctt 24832329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 500
Target Start/End: Complemental strand, 26737534 - 26737479
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagccttt 500  Q
    |||||||||||||||||||||| ||||||||||| | |||| |||||||||||||||    
T  26737534 ggggtgcaaaatcgcacaattagcaaaagataggag-aaaagtgcaattaagccttt 26737479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 500
Target Start/End: Original strand, 6495723 - 6495778
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagataggg-gaaaaaatgcaattaagccttt 500  Q
    ||||||||||||||||||| ||||||||||||| | |||| |||||||||||||||    
T  6495723 ggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaagccttt 6495778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 7980003 - 7980058
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||| ||||  |||| ||||||| ||||||||||||||    
T  7980003 ggggtgcaaaatcgcacaattagcaaactatagaggaaaaagtgcaattaagcctt 7980058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 18296720 - 18296670
Alignment:
Q  199 ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattt 250  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  18296720 ttttgccaattgtgcgattttgcaccccat-ctttttccccctttctgattt 18296670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 11883926 - 11883980
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||| ||||||||| |||| |||| ||||||||||||    
T  11883926 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 20347464 - 20347522
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagccttta 501  Q
    |||||||||||||||||||||  ||||||||| |||| |||| ||||||||||||||||    
T  20347464 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccttta 20347522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 494
Target Start/End: Complemental strand, 41790544 - 41790494
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    ||||||||||||||||||||| |||||  ||||||| ||||||||||||||    
T  41790544 ggggtgcaaaatcgcacaattgacaaactatagggggaaaaatgcaattaa 41790494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 18296693 - 18296749
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||  |||||||||||||  |||| ||||||||||||||    
T  18296693 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 18296749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 497
Target Start/End: Original strand, 26737779 - 26737835
Alignment:
Q  442 gaggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||| ||| |||||||||||||  |||| ||||||||||||    
T  26737779 gaggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaagcc 26737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 2639482 - 2639537
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||  |||||||||||||  |||| |||||||||||||    
T  2639482 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 2639537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 502
Target Start/End: Original strand, 8851582 - 8851641
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctttaa 502  Q
    ||||||||||||||||||||| |||||  ||| |||| |||| |||||||||||||||||    
T  8851582 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctttaa 8851641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 483
Target Start/End: Complemental strand, 15321440 - 15321405
Alignment:
Q  448 tgcaaaatcgcacaattaacaaaagataggggaaaa 483  Q
    |||||||| |||||||||||||||||||||||||||    
T  15321440 tgcaaaattgcacaattaacaaaagataggggaaaa 15321405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 495
Target Start/End: Complemental strand, 18055100 - 18055050
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaag 495  Q
    |||||||||||||||||||||| |||||| |||||| |||| ||||||||||    
T  18055100 ggggtgcaaaatcgcacaattagcaaaag-tagggggaaaagtgcaattaag 18055050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 494
Target Start/End: Original strand, 18055316 - 18055367
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatag-gggaaaaaatgcaattaa 494  Q
    ||||||||||||||||||||| ||||||| ||| |||||||| |||||||||    
T  18055316 ggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaa 18055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 502
Target Start/End: Complemental strand, 26692450 - 26692391
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatag-gggaaaaaatgcaattaagcctttaa 502  Q
    ||||||||||||||||||||| |||||  |||| |||||||| ||||||||| |||||||    
T  26692450 ggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaaacctttaa 26692391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 498
Target Start/End: Complemental strand, 26841641 - 26841586
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||  |||||||||||||  |||| |||||||||||||    
T  26841641 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 26841586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 498
Target Start/End: Complemental strand, 30190977 - 30190922
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||  ||||||||| |||| |||| |||||||||||||    
T  30190977 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 30190922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 497
Target Start/End: Complemental strand, 40221364 - 40221313
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    |||||||||||| ||||||| ||||||||||||| |||  ||||||||||||    
T  40221364 ggtgcaaaatcgaacaattagcaaaagatagggggaaaggtgcaattaagcc 40221313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 494
Target Start/End: Original strand, 43495484 - 43495535
Alignment:
Q  444 ggggtgcaaaatcgcacaattaac-aaaagataggggaaaaaatgcaattaa 494  Q
    ||||||||||||||||||||| || |||||||||||| |||| |||||||||    
T  43495484 ggggtgcaaaatcgcacaattgacaaaaagatagggggaaaagtgcaattaa 43495535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 442 - 499
Target Start/End: Original strand, 6171454 - 6171512
Alignment:
Q  442 gaggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||||| |||||||  ||||||||| |||| |||| ||||||||||||||    
T  6171454 gaggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaagcctt 6171512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 7591850 - 7591904
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagg-ggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| |||||||||||| |  ||| |||||||||||||    
T  7591850 ggggtgcaaaatcgcacaattgacaaaagataggagtgaaagatgcaattaagcc 7591904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 11883628 - 11883676
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  11883628 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 11883676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 11883975 - 11883927
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  11883975 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 11883927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 24832336 - 24832384
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  24832336 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 24832384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 40469778 - 40469730
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  40469778 aattgcactttttccccctatctttt-gctaattgtgcgattttgcaccc 40469730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 496
Target Start/End: Complemental strand, 6495519 - 6495468
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggg-gaaaaaatgcaattaagc 496  Q
    ||||||||||||||||||||||| |||||||||| | |||| |||||||||||    
T  6495519 gggtgcaaaatcgcacaattaac-aaagatagggaggaaaagtgcaattaagc 6495468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 496
Target Start/End: Original strand, 18750126 - 18750178
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagc 496  Q
    ||||||||||||||||||||| |||||  ||||||| | || |||||||||||    
T  18750126 ggggtgcaaaatcgcacaattgacaaactatagggggagaagtgcaattaagc 18750178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 99; Significance: 1e-48; HSPs: 3)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 199 - 329
Target Start/End: Original strand, 1537 - 1667
Alignment:
Q  199 ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcag 298  Q
    ||||||||||||||  ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||  |    
T  1537 ttttgccaattgtgtgattttgcaccccatcttattgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgtctcttatctttttg 1636  T
Q  299 ctaattgtgcgattttgcaccctcacttata 329  Q
    |||||||||||||||||||||||||||||||    
T  1637 ctaattgtgcgattttgcaccctcacttata 1667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 394 - 494
Target Start/End: Original strand, 1731 - 1834
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc--nnnnnnnngagg-ggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaa 490  Q
    ||||||||||||||||||||||||||||||||||||||||          |||| |||||||||||||||||| ||||||||||||||| |||| |||||    
T  1731 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaagaaaagaggaggtgcaaaatcgcacaataaacaaaagatagggggaaaagtgcaa 1830  T
Q  491 ttaa 494  Q
    ||||    
T  1831 ttaa 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 1564 - 1511
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||| |||||||  |||||||||| ||||||| ||||||||||||    
T  1564 ggggtgcaaaatcacacaattggcaaaagatagaggaaaaagtgcaattaagcc 1511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 1e-48; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 18242138 - 18242024
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  18242138 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgttaattgtgcgatttt 18242039  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  18242038 gcaccctcacttata 18242024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 3403971 - 3403867
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  3403971 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcgatttt 3403872  T
Q  315 gcacc 319  Q
    |||||    
T  3403871 gcacc 3403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 30388346 - 30388242
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  30388346 attttgcaccccatctttttaccccctttctgattttgcacctcatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcgatttt 30388247  T
Q  315 gcacc 319  Q
    |||||    
T  30388246 gcacc 30388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 215 - 320
Target Start/End: Original strand, 2762555 - 2762660
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  2762555 attttgcacctcatctttttgccccctttttgattttgcaccccatctttgtgttcaattgcacttttgccccctatctttttgctaattgtgcgatttt 2762654  T
Q  315 gcaccc 320  Q
    ||||||    
T  2762655 gcaccc 2762660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 10039918 - 10039844
Alignment:
Q  246 gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  10039918 gattttgcaccccatctttgtgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 10039844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 215 - 320
Target Start/End: Complemental strand, 13579634 - 13579529
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||  ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||| ||| |||  ||||||||||| ||| |    
T  13579634 attttgcaccccatttttttggcccctttcttattttgcaccccatatttgtgttcaattgcacttttgccccctatatttttgctaattgtgcaattct 13579535  T
Q  315 gcaccc 320  Q
    ||||||    
T  13579534 gcaccc 13579529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 33972098 - 33971994
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatt 492  Q
    |||||||||| |||||||||||||||||||||||||||||        |||||| |||||||||| |||||||||||||||||||||||||| |||||||    
T  33972098 acaaaacacaattggcaaaagatagggtgcaaaatcgctcaaaaataagagggggtgcaaaatcgtacaattaacaaaagataggggaaaaactgcaatt 33971999  T
Q  493 aagcc 497  Q
    |||||    
T  33971998 aagcc 33971994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 11656583 - 11656657
Alignment:
Q  246 gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||  | |||||||||||||||||||||    
T  11656583 gattttgcaccccatctttgtgttcaattgcacttttgccccctatcgttttgataattgtgcgattttgcaccc 11656657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 394 - 500
Target Start/End: Complemental strand, 18241960 - 18241851
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaa 490  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||||||||||| |||| |||| |||||    
T  18241960 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaa 18241861  T
Q  491 ttaagccttt 500  Q
    ||||||||||    
T  18241860 ttaagccttt 18241851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 396 - 500
Target Start/End: Complemental strand, 23250694 - 23250589
Alignment:
Q  396 aaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    |||||||| |||||||||||||||| ||||||||||||        |||||| ||||| ||| ||||||| ||||||||||||||||||| |||||||||    
T  23250694 aaaacacaattggcaaaagatagggcgcaaaatcgctcaaaaaaaagagggggtgcaagatctcacaattgacaaaagataggggaaaaagtgcaattaa 23250595  T
Q  495 gccttt 500  Q
    ||||||    
T  23250594 gccttt 23250589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 444 - 505
Target Start/End: Complemental strand, 21032032 - 21031971
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctttaatct 505  Q
    |||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||    
T  21032032 ggggtgcaaaatcgcacaattagcaaaagttagggggaaaagtgcaattaagcctttaatct 21031971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 33972249 - 33972188
Alignment:
Q  261 ctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccctc 322  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||||||||    
T  33972249 ctttgtgttcaattgcacttttgccccatatctttttgctaattgtgagattttgcaccctc 33972188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 442 - 498
Target Start/End: Complemental strand, 10039731 - 10039675
Alignment:
Q  442 gaggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  10039731 gaggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcct 10039675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 448 - 499
Target Start/End: Original strand, 31598732 - 31598783
Alignment:
Q  448 tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  31598732 tgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaaacctt 31598783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 11656730 - 11656836
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagatagggga-aaaaatgcaa 490  Q
    |||||||||| |||||||||||| ||||||||||||||||         |||||| |||||||||||||||||| ||||||||||| || |||| |||||    
T  11656730 acaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaataaagagggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaa 11656829  T
Q  491 ttaagcc 497  Q
    |||||||    
T  11656830 ttaagcc 11656836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 445 - 499
Target Start/End: Original strand, 31598274 - 31598328
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||||||||||| |||||||||| || |||||| ||||||||||||    
T  31598274 gggtgcaaaatcgcacaattagcaaaagatagagggaaaaatacaattaagcctt 31598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 30388166 - 30388062
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatt 492  Q
    |||||||| | ||| |||||||| ||||||||||||||||        ||| || |||||||||||||||||| |||||||||||||  ||| |||||||    
T  30388166 acaaaacataattgacaaaagatggggtgcaaaatcgctcaaaaaaaagagaggctgcaaaatcgcacaattagcaaaagataggggggaaagtgcaatt 30388067  T
Q  493 aagcc 497  Q
    |||||    
T  30388066 aagcc 30388062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 510
Target Start/End: Original strand, 2354810 - 2354877
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagg-ggaaaaaatgcaattaagcctttaatcttagta 510  Q
    ||||||||||||||||||||| |||||  ||||  || ||||||||||||||||||||||| ||||||    
T  2354810 ggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaagcctttaattttagta 2354877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 3403989 - 3404044
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||| ||||||||| |||| |||| |||||||||||||    
T  3403989 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 3404044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 3403771 - 3403717
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||| ||||||||| |||| |||| ||||||||||||    
T  3403771 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 494
Target Start/End: Complemental strand, 3825580 - 3825530
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    |||||||||||||||||||||| ||||| ||||||| |||| |||||||||    
T  3825580 ggggtgcaaaatcgcacaattagcaaaatatagggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 13579651 - 13579705
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||| |||| |||||||  |||| |||||||||||||    
T  13579651 ggggtgcaaaatcgcacaattagcaaacgatagggagaaaagtgcaattaagcct 13579705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 18242156 - 18242210
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggg-gaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  ||||||||||||  ||||||||||||||||||    
T  18242156 ggggtgcaaaatcgcacaattggcaaaagatagggaaaaaaaatgcaattaagcc 18242210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 498
Target Start/End: Original strand, 21032285 - 21032335
Alignment:
Q  449 gcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcct 498  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  21032285 gcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 321
Target Start/End: Original strand, 33658560 - 33658618
Alignment:
Q  263 ttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccct 321  Q
    ||||||| |||||||||||||||| ||||||||  || |||||||| ||||||||||||    
T  33658560 ttgtgtttaattgcacttttgccctttatctttttgccaattgtgcaattttgcaccct 33658618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 485
Target Start/End: Original strand, 30388362 - 30388403
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaa 485  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  30388362 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaa 30388403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 448 - 479
Target Start/End: Complemental strand, 12714481 - 12714450
Alignment:
Q  448 tgcaaaatcgcacaattaacaaaagatagggg 479  Q
    ||||||||||||||||||||||||||||||||    
T  12714481 tgcaaaatcgcacaattaacaaaagatagggg 12714450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 33655115 - 33655170
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||| ||||||||| ||||||||| ||| | || ||||||||||||||    
T  33655115 ggggtgcaaaattgcacaattagcaaaagataaggggacaagtgcaattaagcctt 33655170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 33829636 - 33829691
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||  |||||||||||||  |||| |||||||||||||    
T  33829636 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 33829691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 23250892 - 23250946
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    ||||| |||| ||||||||||| |||||||||||| ||||| |||||| ||||||    
T  23250892 ggggtacaaattcgcacaattagcaaaagatagggcaaaaagtgcaatcaagcct 23250946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 33829044 - 33828990
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  |||||||||||||  |||| ||||||||||||    
T  33829044 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 3403722 - 3403770
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  3403722 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 3403770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 3404038 - 3403990
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  3404038 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 3403990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 494
Target Start/End: Original strand, 23250772 - 23250821
Alignment:
Q  446 ggtgcaaaatcgcacaattaa-caaaagataggggaaaaaatgcaattaa 494  Q
    ||||||||||||||||||||| ||||| ||||||| |||| |||||||||    
T  23250772 ggtgcaaaatcgcacaattaaccaaaatataggggtaaaagtgcaattaa 23250821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 7654548 - 7654604
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||||||||||| |||||  ||| |||| |||| ||||||||||||||    
T  7654548 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 7654604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 1e-48; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 25115829 - 25115943
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  25115829 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatcattttgctaattgtgcgatttt 25115928  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  25115929 gcaccctcacttata 25115943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 25174921 - 25175035
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  25174921 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatcattttgctaattgtgcgatttt 25175020  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  25175021 gcaccctcacttata 25175035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 215 - 319
Target Start/End: Original strand, 18433087 - 18433191
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  18433087 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcgatttt 18433186  T
Q  315 gcacc 319  Q
    |||||    
T  18433187 gcacc 18433191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 34576937 - 34577040
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||    
T  34576937 attttgcaccccatctttttgccccctttctgattttccaccccatctttgtgtttaattgcacttttgccccttatctttttgctaattgtgcgatttt 34577036  T
Q  315 gcac 318  Q
    ||||    
T  34577037 gcac 34577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 26020522 - 26020625
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||||||||||    
T  26020522 attttgcaccgcatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgtcccttatctttttgttaattgtgcgatttt 26020621  T
Q  315 gcac 318  Q
    ||||    
T  26020622 gcac 26020625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 195 - 320
Target Start/End: Original strand, 5187574 - 5187699
Alignment:
Q  195 tattttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctt 294  Q
    |||||||||| ||| |||| ||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  5187574 tattttttgctaatcgtgcgattttgcaccccatctttttgtcccctttctgattttgcacctcatctttgtgttcaattgcacttttgtcccctatctt 5187673  T
Q  295 tcagctaattgtgcgattttgcaccc 320  Q
    |  ||||||| |||||||||| ||||    
T  5187674 tttgctaattatgcgattttgtaccc 5187699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 199 - 317
Target Start/End: Original strand, 9665582 - 9665700
Alignment:
Q  199 ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcag 298  Q
    |||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||   ||||||||| |||||||  |    
T  9665582 ttttgctaattgtgcaattttgcaccccatctttttgctccctttctgattttgcacctcatctttgtgttcaattgtgtttttgccccctatctttttg 9665681  T
Q  299 ctaattgtgcgattttgca 317  Q
    |||||||||||||| ||||    
T  9665682 ctaattgtgcgattctgca 9665700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 199 - 284
Target Start/End: Complemental strand, 22429223 - 22429138
Alignment:
Q  199 ttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgc 284  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22429223 ttttgctaattgtgcgattttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgc 22429138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 394 - 498
Target Start/End: Original strand, 25175099 - 25175206
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc-nnnnnnnnga-ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaa 490  Q
    ||||||||||||||||||||||||||||||||||||||||         || |||||||||||||||||||||||||||||||| |||| |||| |||||    
T  25175099 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaa 25175198  T
Q  491 ttaagcct 498  Q
    ||||||||    
T  25175199 ttaagcct 25175206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 394 - 500
Target Start/End: Original strand, 18433265 - 18433373
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaat 491  Q
    |||||||||| ||| |||||||| ||||||||||||||||        |||||| |||||||||||||||||||||||||||| |||| |||| ||||||    
T  18433265 acaaaacacaattgacaaaagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaat 18433364  T
Q  492 taagccttt 500  Q
    |||||||||    
T  18433365 taagccttt 18433373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 394 - 498
Target Start/End: Original strand, 25116007 - 25116116
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc----nnnnnnnngaggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgc 488  Q
    ||||||||||||||||||||||||||||||||||||||||            | |||||||||||||||||||||||||||||||| |||| |||| |||    
T  25116007 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagaaggggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgc 25116106  T
Q  489 aattaagcct 498  Q
    ||||||||||    
T  25116107 aattaagcct 25116116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 34577113 - 34577217
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnnga-ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatt 492  Q
    |||||||||| ||| |||||||| ||||||||||||||||        || ||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  34577113 acaaaacacaattgacaaaagatggggtgcaaaatcgctcaaaaaaaagatggggtgcaaaatcacacaattagcaaaagataggggaaaaagtgcaatt 34577212  T
Q  493 aagcc 497  Q
    |||||    
T  34577213 aagcc 34577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 317
Target Start/End: Complemental strand, 5779844 - 5779742
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||  ||||| ||||  || ||||||||||||||| | ||| |||||||||||||||||||||| | | |||||||  |||||||||||||||||    
T  5779844 attttgcattccatctttttttcctctttctgattttgcatctcatttttgtgttcaattgcacttttgtctcctatctttttgctaattgtgcgatttt 5779745  T
Q  315 gca 317  Q
    |||    
T  5779744 gca 5779742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 22429196 - 22429250
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  22429196 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaatgcaattaagcct 22429250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 498
Target Start/End: Complemental strand, 22429037 - 22428933
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngaggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatta 493  Q
    |||||||||| |||||||||||| ||||||||||| ||||          |||||||||||||||||||||| |||||||||||||  ||| ||||||||    
T  22429037 acaaaacacaattggcaaaagatggggtgcaaaattgctcaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaagtgcaatta 22428938  T
Q  494 agcct 498  Q
    |||||    
T  22428937 agcct 22428933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 23011383 - 23011432
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  23011383 gggtgcaaaatcgcacaattaacaaaagataagggaaaaagtgcaattaa 23011432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 41382945 - 41382896
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||    
T  41382945 gggtgcaaaatcgcacaattaacaaaagataggggggaaaatgcaattaa 41382896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 23011131 - 23011079
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||    
T  23011131 gggtgcaaaatcgcacaattagcaaaagataaggggaaaaatgcaattaagcc 23011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 33324838 - 33324893
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaa-tgcaattaagcct 498  Q
    ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  33324838 ggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagcct 33324893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 443 - 501
Target Start/End: Original strand, 41383166 - 41383224
Alignment:
Q  443 aggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagccttta 501  Q
    ||||||||||||||||||||||| ||||| ||||||| |||| | ||||||||||||||    
T  41383166 aggggtgcaaaatcgcacaattagcaaaaaatagggggaaaagttcaattaagccttta 41383224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 500
Target Start/End: Complemental strand, 25940574 - 25940518
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaa-aaaatgcaattaagccttt 500  Q
    |||||||||||||||||||| |||||  ||||||||| |||||||||||||||||||    
T  25940574 gggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaagccttt 25940518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 26020504 - 26020448
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggg-gaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||| |||||||||||| | |||| ||||||||||||||    
T  26020504 ggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcctt 26020448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 494
Target Start/End: Complemental strand, 31569958 - 31569910
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  31569958 ggtgcaaaatcgcacaattgacaaaagatagggggaaaagtgcaattaa 31569910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 5187830 - 5187885
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagat-aggggaaaaaatgcaattaagcct 498  Q
    |||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||    
T  5187830 ggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagcct 5187885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 497
Target Start/End: Complemental strand, 12441093 - 12441042
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    |||||||||| |||||||||| ||||||||||| ||||| ||||||||||||    
T  12441093 ggtgcaaaattgcacaattaataaaagatagggaaaaaagtgcaattaagcc 12441042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 498
Target Start/End: Complemental strand, 18817006 - 18816951
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||||||||||||    
T  18817006 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 18816951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 18433069 - 18433015
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||| ||||||||| |||| |||| ||||||||||||    
T  18433069 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 23011315 - 23011261
Alignment:
Q  263 ttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgca 317  Q
    ||||||| ||||||| ||||||||| ||||||| ||| |||||||||||||||||    
T  23011315 ttgtgtttaattgcaattttgccccctatcttttagccaattgtgcgattttgca 23011261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 9665776 - 9665879
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngag-gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatt 492  Q
    |||||||||| || ||||||||| ||||||||||||||||         || ||||||||||| ||||||||| ||||||||||||| |||| || ||||    
T  9665776 acaaaacacaatttgcaaaagatggggtgcaaaatcgctcaaaaaaaatagtgggtgcaaaat-gcacaattagcaaaagatagggggaaaagtggaatt 9665874  T
Q  493 aagcc 497  Q
    |||||    
T  9665875 aagcc 9665879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 498
Target Start/End: Original strand, 43464194 - 43464246
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    ||||||||||||||||||| |||||  ||||||| |||| |||||||||||||    
T  43464194 ggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcct 43464246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 483
Target Start/End: Complemental strand, 9665609 - 9665570
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaa 483  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  9665609 ggggtgcaaaattgcacaattagcaaaagataggggaaaa 9665570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 500
Target Start/End: Original strand, 34147512 - 34147567
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagccttt 500  Q
    ||||||||||||||||||| |||||  ||| ||||||||| |||||||||||||||    
T  34147512 ggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagccttt 34147567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 11350861 - 11350804
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggga-aaaaatgcaattaagccttta 501  Q
    |||||||||||| ||||||||  |||||||||||||  |||||||||||||||||||||    
T  11350861 ggggtgcaaaat-gcacaattggcaaaagataggggtgaaaaatgcaattaagccttta 11350804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 18817611 - 18817665
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  |||||||||||||  |||| ||||||||||||    
T  18817611 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 22729058 - 22729008
Alignment:
Q  447 gtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||| |||||  ||||||| |||| ||||||||||||    
T  22729058 gtgcaaaatcgcacaatttacaaactatagggggaaaagtgcaattaagcc 22729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 502
Target Start/End: Original strand, 22729440 - 22729498
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctttaa 502  Q
    |||||||||||||||||||||  ||||  ||||||| |||| ||||||||||| |||||    
T  22729440 ggggtgcaaaatcgcacaattggcaaattatagggggaaaagtgcaattaagcatttaa 22729498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 494
Target Start/End: Complemental strand, 34576920 - 34576870
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    |||||| ||||||||||||||| |||||||||||||  ||| |||||||||    
T  34576920 ggggtgtaaaatcgcacaattagcaaaagataggggggaaagtgcaattaa 34576870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 500
Target Start/End: Complemental strand, 5187605 - 5187548
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaa-aatgcaattaagccttt 500  Q
    ||||||||||||||||| |||| ||||| ||||||||||| | | |||||||||||||    
T  5187605 ggggtgcaaaatcgcacgattagcaaaaaataggggaaaagagtacaattaagccttt 5187548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 5187879 - 5187831
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||||||||||||||||  | ||||||||| |||||||||||    
T  5187879 aattgcacttttgccccttatcttt-tgttaattgtgcaattttgcaccc 5187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 12441249 - 12441196
Alignment:
Q  262 tttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttg 315  Q
    |||||||| ||||||||||||||||| |||||||  |  |||||||||||||||    
T  12441249 tttgtgtttaattgcacttttgccccctatctttttgtcaattgtgcgattttg 12441196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 497
Target Start/End: Original strand, 12441320 - 12441364
Alignment:
Q  452 aaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||    
T  12441320 aaatcgcacaattagcaaaagatagggg-aaaagtgcaattaagcc 12441364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 18433020 - 18433068
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  18433020 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 18433068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 500
Target Start/End: Original strand, 19514963 - 19515020
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagccttt 500  Q
    ||||||||||||||||||||| |||||  ||| |||| |||| |||||||||||||||    
T  19514963 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccttt 19515020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 37610255 - 37610198
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagccttta 501  Q
    ||||||||||||| |||||||  ||||  ||||||| |||| ||||||||||||||||    
T  37610255 ggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagccttta 37610198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 37780373 - 37780316
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagccttta 501  Q
    ||||||||||||| |||||||  ||||  ||||||| |||| ||||||||||||||||    
T  37780373 ggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagccttta 37780316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 9869795 - 9869739
Alignment:
Q  264 tgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||| ||||||||||||||||| | |||||   | ||||||||||||||||||||    
T  9869795 tgtgtttaattgcacttttgccccctgtctttttaccaattgtgcgattttgcaccc 9869739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 20969002 - 20968888
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  20969002 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatcattttgctaattgtgcgatttt 20968903  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  20968902 gcaccctcacttata 20968888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 215 - 329
Target Start/End: Original strand, 10293680 - 10293793
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  10293680 attttgcaccccatctttttgccccctttctgattttgcaccc-atctttgtgttcaattgcacttttgccccttatctttttgttaattgtgcgatttt 10293778  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  10293779 gcaccctcacttata 10293793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 215 - 319
Target Start/End: Original strand, 18874961 - 18875065
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  18874961 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccctatctttttgctaattgtgcgatttt 18875060  T
Q  315 gcacc 319  Q
    |||||    
T  18875061 gcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 9026805 - 9026907
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  9026805 attttgcaccccatcttttt-ccccctttctgattttgccccccgtctttgtgttcaattgcacttttgccccctatctttttgctaattgtgcgatttt 9026903  T
Q  315 gcac 318  Q
    ||||    
T  9026904 gcac 9026907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 394 - 502
Target Start/End: Complemental strand, 20968824 - 20968713
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaa 490  Q
    ||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||||||||||| |||| |||  |||||    
T  20968824 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaa 20968725  T
Q  491 ttaagcctttaa 502  Q
    ||||||||||||    
T  20968724 ttaagcctttaa 20968713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 10293857 - 10293963
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc-nnnnnnnnga-ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaa 490  Q
    ||||||||||||||||||||||||||||||||||||||||         || |||||||||||||||||||||||||||||||| |||| |||| |||||    
T  10293857 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaa 10293956  T
Q  491 ttaagcc 497  Q
    |||||||    
T  10293957 ttaagcc 10293963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 3644795 - 3644721
Alignment:
Q  246 gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||| |   |||||||||||||||||||||||    
T  3644795 gattttgcaccccatctttgtgtttaattgcacttttgccctctatcctcttgctaattgtgcgattttgcaccc 3644721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 21896511 - 21896564
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  21896511 ggggtgcaaaatcgcacaattgacaaaatataggggaaaaaatgcaattaagcc 21896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 498
Target Start/End: Complemental strand, 47870926 - 47870822
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngaggggtgcaaaat-cgcacaattaacaaaagataggggaaaaaatgcaatt 492  Q
    |||||||||| |||||||||||| ||||||||||||||||         ||||||||||||| |||| ||||| |||||||||||||||||| |||||||    
T  47870926 acaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaaaaa-aggggtgcaaaattcgcataattagcaaaagataggggaaaaagtgcaatt 47870828  T
Q  493 aagcct 498  Q
    ||||||    
T  47870827 aagcct 47870822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 444 - 500
Target Start/End: Original strand, 47871122 - 47871178
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagccttt 500  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  47871122 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagccttt 47871178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 10293662 - 10293608
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaa-aaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  10293662 ggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaattaagcc 10293608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 494
Target Start/End: Complemental strand, 9026823 - 9026739
Alignment:
Q  410 aaaagatagggtgcaaaatcgctcnnnnnnnngaggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    ||||||| ||||||||||||||||         ||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  9026823 aaaagatggggtgcaaaatcgctcaaaaaataaaggggtgcaaaattgcacaattaacaaaagataggaggaaaaatgcaattaa 9026739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 451 - 498
Target Start/End: Complemental strand, 10771550 - 10771503
Alignment:
Q  451 aaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  10771550 aaaatcgcacaattgacaaaagatagggaaaaaaatgcaattaagcct 10771503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 3644783 - 3644837
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagat-aggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  3644783 ggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaagcc 3644837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 447 - 499
Target Start/End: Original strand, 17441066 - 17441119
Alignment:
Q  447 gtgcaaaatcgcacaattaacaaaagatag-gggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||||||||    
T  17441066 gtgcaaaatcgcacaattaacaaaagatagagaggaaaaatgcaattaagcctt 17441119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 26007235 - 26007178
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagccttta 501  Q
    ||||||||||||||||||||| |||||  |||||||  ||||||||||||||||||||    
T  26007235 ggggtgcaaaatcgcacaattgacaaactataggggggaaaatgcaattaagccttta 26007178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 18874935 - 18874881
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcct 498  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||||| |||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattgagcct 18874881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 3353181 - 3353128
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| |||||  ||||||| |||| ||||||||||||    
T  3353181 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 3353128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 8314066 - 8314013
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagatagggga-aaaaatgcaattaagcc 497  Q
    |||||||||||||||||||| |||||| |||||||| |||| ||||||||||||    
T  8314066 gggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 8315083 - 8315136
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||| |||||| |||||||  ||| |||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatataggggggaaagtgcaattaagcct 8315136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 263 - 320
Target Start/End: Complemental strand, 13657679 - 13657622
Alignment:
Q  263 ttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    ||||||| ||||||||||||| ||| |||||||  || ||||||||||||||||||||    
T  13657679 ttgtgtttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcaccc 13657622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 17372403 - 17372298
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngagggg-tgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaat 491  Q
    |||||| ||| |||||||||||| ||||||||||||||||         ||||| |||||||||||||||||| ||||| ||| ||||||||  ||||||    
T  17372403 acaaaatacaattggcaaaagatggggtgcaaaatcgctcaaaaaaaacagggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaat 17372304  T
Q  492 taagcc 497  Q
    ||||||    
T  17372303 taagcc 17372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 442 - 494
Target Start/End: Original strand, 23630033 - 23630086
Alignment:
Q  442 gaggggtgcaaaatcgcacaattaacaaaagatagg-ggaaaaaatgcaattaa 494  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||| |||||||||    
T  23630033 gaggggtgcaaaatcgcacaattaccaaaaaataggaggaaaaagtgcaattaa 23630086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 42673296 - 42673349
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| |||||  ||||||| |||| ||||||||||||    
T  42673296 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 42673349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 45060830 - 45060774
Alignment:
Q  262 tttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcacc 319  Q
    |||||||||||||||||||||||||| |||||||  || |||||| ||||||||||||    
T  45060830 tttgtgttcaattgcacttttgcccc-tatctttttgccaattgttcgattttgcacc 45060774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 4947377 - 4947433
Alignment:
Q  262 tttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcac 318  Q
    |||||| ||||||||||||||||||  |||||||  || ||||||||||||||||||    
T  4947377 tttgtgctcaattgcacttttgccctctatctttttgccaattgtgcgattttgcac 4947433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 9026982 - 9027086
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnnga-ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatt 492  Q
    |||||||||| |||||||||||| |||||||||||| |||         | |||||| ||||| ||||||||| ||||||||||||| |||| || ||||    
T  9026982 acaaaacacaattggcaaaagatggggtgcaaaatcactcaaaaaaaacaaggggtgtaaaattgcacaattagcaaaagatagggggaaaagtgaaatt 9027081  T
Q  493 aagcc 497  Q
    |||||    
T  9027082 aagcc 9027086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 18874885 - 18874936
Alignment:
Q  269 tcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccct 321  Q
    |||||||||||||| |||| |||||||  ||||||||||||||||||||||||    
T  18874885 tcaattgcactttttccccctatctttt-gctaattgtgcgattttgcaccct 18874936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 494
Target Start/End: Original strand, 1101090 - 1101141
Alignment:
Q  444 ggggtgcaaaatcgcacaattaac-aaaagataggggaaaaaatgcaattaa 494  Q
    ||||||||||||||||||||| || |||||||||||| |||| |||||||||    
T  1101090 ggggtgcaaaatcgcacaattgacaaaaagataggggcaaaagtgcaattaa 1101141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Complemental strand, 13657552 - 13657513
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc 433  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  13657552 acaaaacacaattggcaaaagatggggtgcaaaatcgctc 13657513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 497
Target Start/End: Original strand, 20969018 - 20969073
Alignment:
Q  443 aggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||||  ||||||||| |||| |||| ||||||||||||    
T  20969018 aggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 21895657 - 21895736
Alignment:
Q  171 ggcttaattgcacttttnnnnnnntattttttgccaattgtgcaattttgcaccccatccttttgccccctttctgatttt 251  Q
    |||||||||||||||||       ||| ||||||||||||||  |||||||||||||| |||||  |||||||||||||||    
T  21895657 ggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcaccccat-cttttttcccctttctgatttt 21895736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Original strand, 26540817 - 26540856
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc 433  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  26540817 acaaaacacaattggcaaaagatggggtgcaaaatcgctc 26540856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 497
Target Start/End: Original strand, 42627544 - 42627599
Alignment:
Q  442 gaggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||| ||||||||| |||||||| |||||||||| || |||| ||||||||||||    
T  42627544 gagggatgcaaaatcacacaattagcaaaagatagagggaaaagtgcaattaagcc 42627599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 320
Target Start/End: Complemental strand, 1101148 - 1101091
Alignment:
Q  262 tttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||| ||||||||||||||||| |||||||  |  ||||||||||||||||||||    
T  1101148 tttgtgtttaattgcacttttgcccc-tatctttttgtcaattgtgcgattttgcaccc 1101091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 494
Target Start/End: Original strand, 1928434 - 1928484
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    |||||||||||||||||||||  ||||||||||||   |||||||||||||    
T  1928434 ggggtgcaaaatcgcacaattggcaaaagatagggaggaaaatgcaattaa 1928484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 479
Target Start/End: Complemental strand, 4947312 - 4947278
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagatagggg 479  Q
    ||||||||||||||||||||||||||| |||||||    
T  4947312 gggtgcaaaatcgcacaattaacaaaaaatagggg 4947278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 494
Target Start/End: Original strand, 14015964 - 14016014
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    |||||||||||||||||||||| |||||||||||   |||| |||||||||    
T  14015964 ggggtgcaaaatcgcacaattagcaaaagataggatgaaaagtgcaattaa 14016014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 18875191 - 18875245
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||| ||||||| ||||||||| |||| |||| ||||||||||||    
T  18875191 ggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaagcc 18875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 494
Target Start/End: Complemental strand, 26540744 - 26540694
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    |||||||||||| |||||||| |||||| ||||||| |||| |||||||||    
T  26540744 ggggtgcaaaattgcacaattgacaaaaaataggggcaaaagtgcaattaa 26540694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 497
Target Start/End: Complemental strand, 28702328 - 28702278
Alignment:
Q  447 gtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||| |||| ||||||||||| ||||||| || |||||||||    
T  28702328 gtgcaaaatcgcataattgacaaaagatagaggaaaaagtgaaattaagcc 28702278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 498
Target Start/End: Original strand, 45060872 - 45060926
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcct 498  Q
    ||||| ||||||||||||||| |||||||||||||  |||| |||||||||||||    
T  45060872 gggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagcct 45060926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 320
Target Start/End: Complemental strand, 17372531 - 17372474
Alignment:
Q  263 ttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    ||||||| ||| |||||||||| || |||||||  || ||||||||||||||||||||    
T  17372531 ttgtgtttaatggcacttttgcaccctatctttttgccaattgtgcgattttgcaccc 17372474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 496
Target Start/End: Original strand, 17372593 - 17372645
Alignment:
Q  443 aggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagc 496  Q
    |||||||||||||||||||||||  |||| ||||||| |||| |||||||||||    
T  17372593 aggggtgcaaaatcgcacaattagtaaaatatagggg-aaaagtgcaattaagc 17372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 18875240 - 18875192
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    ||||||||||||||||| |||||||  ||||||||| |||||||||||||    
T  18875240 aattgcacttttgccccctatcttt-tgctaattgtacgattttgcaccc 18875192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 42673031 - 42672978
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  ||||  ||||||| |||| ||||||||||||    
T  42673031 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 42672978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 498
Target Start/End: Complemental strand, 47665963 - 47665910
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagat-aggggaaaaaatgcaattaagcct 498  Q
    ||||||||||||||||||| |||||  || |||||||||| |||||||||||||    
T  47665963 ggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagcct 47665910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 47666361 - 47666333
Alignment:
Q  200 tttgccaattgtgcaattttgcaccccat 228  Q
    |||||||||||||||||||||||||||||    
T  47666361 tttgccaattgtgcaattttgcaccccat 47666333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 53687942 - 53687886
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||||||||||| |||||  ||| |||| |||| ||||||||||||||    
T  53687942 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 53687886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 3e-46; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 9412307 - 9412193
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  9412307 attttgcaccccatctttttgccccctttcagattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaactgtgcgatttt 9412208  T
Q  315 gcaccctcacttata 329  Q
    |||||||||||||||    
T  9412207 gcaccctcacttata 9412193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 3687639 - 3687525
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||||||    
T  3687639 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgtcccttatttttttgctaattgtgcgatttt 3687540  T
Q  315 gcaccctcacttata 329  Q
     ||||||||||||||    
T  3687539 acaccctcacttata 3687525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 195 - 320
Target Start/End: Complemental strand, 6908515 - 6908391
Alignment:
Q  195 tattttttgccaattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctt 294  Q
    |||||||||| |||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||    
T  6908515 tattttttgctaattgtgcgattttgcaccc-atctttttgcctcctttctgattttgcaccccatctttgtgttcaattgcgcttttaccccctatctt 6908417  T
Q  295 tcagctaattgtgcgattttgcaccc 320  Q
    |  |||||||||||||||||||||||    
T  6908416 tttgctaattgtgcgattttgcaccc 6908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 35080243 - 35080132
Alignment:
Q  206 aattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattg 305  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||| |||||||||    
T  35080243 aattgtgcgattttgcaccccatctttttgcctcctttctgattttgcacctcatctttgtgttcaattgtgcttttgccccctatctttaagctaattg 35080144  T
Q  306 tgcgattttgca 317  Q
    ||||||||||||    
T  35080143 tgcgattttgca 35080132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 5349753 - 5349641
Alignment:
Q  206 aattgtgcaattttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattg 305  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||  ||  ||||    
T  5349753 aattgtgcgattttgcaccccatctttttaccccctttctgattttgcaccccatctttgtattcaattgcacttttgccccctatctttttgcatattg 5349654  T
Q  306 tgcgattttgcac 318  Q
    ||| |||||||||    
T  5349653 tgcaattttgcac 5349641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 231 - 319
Target Start/End: Complemental strand, 13772881 - 13772793
Alignment:
Q  231 ttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcacc 319  Q
    |||||| |||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  13772881 ttttgcaccctttctaatttttcaccccatctttgtgttcaattacacttttgccccttatctttttgctaattgtgcgattttgcacc 13772793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 231 - 322
Target Start/End: Complemental strand, 15567255 - 15567164
Alignment:
Q  231 ttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccctc 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||  |||||||||| ||||||||| ||||    
T  15567255 ttttgcaccctttctgattttgcaccccatctttgtgttcaattgcacgtttgccccctctctttttgctaattgtgtgattttgcatcctc 15567164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 33628466 - 33628554
Alignment:
Q  231 ttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcacc 319  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||| ||||| || |||||||  ||||||||||| ||||||||||    
T  33628466 ttttgcaccctttctgattttgcaccccatccttgtgttcaattgcacatttgcaccctatctttttgctaattgtgcaattttgcacc 33628554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 215 - 320
Target Start/End: Complemental strand, 34235961 - 34235856
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||| || || ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||   | |||||| ||||||     
T  34235961 attttgcacgccgtctttttgccccatttctgattctgcaccccatctttgtgtttaattgcacttttgccccctatcttttttcaaattgttcgatttc 34235862  T
Q  315 gcaccc 320  Q
    ||||||    
T  34235861 gcaccc 34235856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 394 - 500
Target Start/End: Complemental strand, 9412129 - 9412020
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagat-aggggaaaaaatgcaa 490  Q
    ||||||||||||||||||||||||||||| ||||||||||         |||||| ||||||||||||||||||||||||||| ||||| |||| |||||    
T  9412129 acaaaacacagttggcaaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaa 9412030  T
Q  491 ttaagccttt 500  Q
    ||||||||||    
T  9412029 ttaagccttt 9412020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 394 - 497
Target Start/End: Complemental strand, 3687461 - 3687353
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnnga---ggggtgcaaaatcgcacaattaacaaaagata--ggggaaaaaatgc 488  Q
    ||||||||||||||||||||||||||||||||||||||||         |   ||||||||||||||||||||||||||||||||  |||| |||| |||    
T  3687461 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgc 3687362  T
Q  489 aattaagcc 497  Q
    |||||||||    
T  3687361 aattaagcc 3687353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 394 - 498
Target Start/End: Original strand, 23686667 - 23686772
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gaggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaat 491  Q
    |||||||||| |||||||||||| ||||||||||||||||         ||||||| |||||||||||||||| ||||||||| ||||||||| ||||||    
T  23686667 acaaaacacatttggcaaaagatggggtgcaaaatcgctccaaaaaaaagaggggt-caaaatcgcacaattagcaaaagatagggggaaaaagtgcaat 23686765  T
Q  492 taagcct 498  Q
    |||||||    
T  23686766 taagcct 23686772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 445 - 498
Target Start/End: Complemental strand, 6908265 - 6908212
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  6908265 gggtgcaaaatcgcacaattaacaatagatagggggaaaagtgcaattaagcct 6908212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 445 - 497
Target Start/End: Original strand, 38191566 - 38191619
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcc 497  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  38191566 gggtgcaaaatcgcataattaacaaaagataggggtaaaaaatgcaattaagcc 38191619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 444 - 496
Target Start/End: Original strand, 8953889 - 8953941
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagc 496  Q
    |||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  8953889 ggggtgcaaaattgcacaattaacaaaagatagggggaaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 444 - 482
Target Start/End: Original strand, 5349733 - 5349771
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaa 482  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5349733 ggggtgcaaaatcgcacaattaacaaaagataggggaaa 5349771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 444 - 506
Target Start/End: Complemental strand, 36527437 - 36527375
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctttaatctt 506  Q
    ||||||||||||||||||||| |||||  |||||||||||| ||||||||| ||||| |||||    
T  36527437 ggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaaaccttttatctt 36527375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 501
Target Start/End: Original strand, 13744233 - 13744290
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagccttta 501  Q
    ||||||||||||||||||||| |||||  ||||||| |||| ||||||||||||||||    
T  13744233 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagccttta 13744290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 498
Target Start/End: Complemental strand, 13863367 - 13863312
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||||||||||||    
T  13863367 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 13863312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 500
Target Start/End: Complemental strand, 15567095 - 15566989
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngaggggtgcaaaatcgcacaattaacaaaagataggg-gaaaaaatgcaatt 492  Q
    |||||||||| ||| |||||||| ||||||||||||||||         ||||||||||||||||||||||| |||||  | ||| | ||||||||||||    
T  15567095 acaaaacacaattgacaaaagatggggtgcaaaatcgctcaaaaaaat-aggggtgcaaaatcgcacaattagcaaaaagtggggagcaaaaatgcaatt 15566997  T
Q  493 aagccttt 500  Q
    ||||||||    
T  15566996 aagccttt 15566989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 5349566 - 5349489
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngaggggtgcaaaatcgcacaattaacaaaag 472  Q
    ||||||||| |||| |||||||| ||||||||||||||||        | |||||||||||||||||||||||||||||    
T  5349566 acaaaacacggttgacaaaagatggggtgcaaaatcgctcaaaaaaaag-ggggtgcaaaatcgcacaattaacaaaag 5349489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 494
Target Start/End: Original strand, 27096290 - 27096392
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaat 491  Q
    |||||||||| ||||||||| || ||||||||||||||||         |||||| ||||||||| ||||||| |||||||||||||| |||| ||||||    
T  27096290 acaaaacacaattggcaaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgcaaaatcacacaattgacaaaagatagggggaaaagtgcaat 27096389  T
Q  492 taa 494  Q
    |||    
T  27096390 taa 27096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 494
Target Start/End: Complemental strand, 27182013 - 27181911
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gagggg-tgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaat 491  Q
    |||||||||| ||||||||| || ||||||||||||||||         |||||| ||||||||| ||||||| |||||||||||||| |||| ||||||    
T  27182013 acaaaacacaattggcaaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgcaaaatcacacaattgacaaaagatagggggaaaagtgcaat 27181914  T
Q  492 taa 494  Q
    |||    
T  27181913 taa 27181911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 48359373 - 48359320
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| |||||  ||||||| |||| ||||||||||||    
T  48359373 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 23686473 - 23686421
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||| | ||||||| ||||||||||||| |||| ||||||||||||    
T  23686473 gggtgcaaaattgtacaattagcaaaagatagggggaaaagtgcaattaagcc 23686421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 495
Target Start/End: Complemental strand, 29291860 - 29291808
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggg-gaaaaaatgcaattaag 495  Q
    |||||||||||||||| ||||| |||||||||||| |||||| ||||||||||    
T  29291860 ggggtgcaaaatcgcataattatcaaaagatagggagaaaaagtgcaattaag 29291808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 35080012 - 35079960
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    |||||||||| | |||||||| ||||||||||||| |||| ||||||||||||    
T  35080012 gggtgcaaaaccccacaattagcaaaagatagggggaaaagtgcaattaagcc 35079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 483
Target Start/End: Original strand, 35080223 - 35080263
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagat-aggggaaaa 483  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  35080223 ggggtgcaaaatcgcacaattaacaaaagataaggggaaaa 35080263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 44600135 - 44600191
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||  |||||||||||||  |||| ||||||||||||||    
T  44600135 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctt 44600191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 9412325 - 9412380
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||  ||||||||| |||| |||| |||||||||||||    
T  9412325 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 9412380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 498
Target Start/End: Complemental strand, 13772695 - 13772640
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggg-gaaaaaatgcaattaagcct 498  Q
    ||||||||||||| |||||||| |||||||||||| | |||| |||||||||||||    
T  13772695 ggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagcct 13772640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 29292025 - 29291982
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcacccc 258  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||    
T  29292025 attttgcaccctatctttttgccccatttctgattttgcacccc 29291982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 502
Target Start/End: Original strand, 30857904 - 30857963
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggga-aaaaatgcaattaagcctttaa 502  Q
    |||||||||||| |||||||| |||||||||| | || |||| |||||||||||||||||    
T  30857904 ggggtgcaaaattgcacaattgacaaaagataagagacaaaagtgcaattaagcctttaa 30857963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 33628660 - 33628715
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatag-gggaaaaaatgcaattaagcct 498  Q
    ||||||||||||||||||||||  ||||||||| |||||||| ||||||| |||||    
T  33628660 ggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatttagcct 33628715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 3687656 - 3687710
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  ||||||||| |||| |||| ||||||||||||    
T  3687656 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 447 - 496
Target Start/End: Complemental strand, 5735303 - 5735253
Alignment:
Q  447 gtgcaaaatcgcacaattaacaaaagatagggga-aaaaatgcaattaagc 496  Q
    ||||||||||||||||||| | |||||||||||| |||| |||||||||||    
T  5735303 gtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaagc 5735253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 432
Target Start/End: Complemental strand, 6908318 - 6908280
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgct 432  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  6908318 acaaaacacaattggcaaaagatagagtgcaaaatcgct 6908280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 13772901 - 13772955
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||| |||| |||| |||| |||| ||||||||||||    
T  13772901 ggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcc 13772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 494
Target Start/End: Original strand, 22740591 - 22740641
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    ||||||||||||||||||||| |||||  ||||||| |||| |||||||||    
T  22740591 ggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 29292041 - 29292095
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaa-tgcaattaagcc 497  Q
    |||||| ||||||||||||||| |||||| ||| |||||||| ||||||||||||    
T  29292041 ggggtggaaaatcgcacaattagcaaaagttagaggaaaaaagtgcaattaagcc 29292095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 499
Target Start/End: Original strand, 38826915 - 38826969
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||||||||| |||||  ||| |||| |||||||||||||||||||    
T  38826915 ggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcctt 38826969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 44599543 - 44599489
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  |||||||||||||  |||| ||||||||||||    
T  44599543 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 494
Target Start/End: Original strand, 5735553 - 5735598
Alignment:
Q  450 caaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaa 494  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||||    
T  5735553 caaaatcgcacaattaataaaagatagggggaaaaagtgcaattaa 5735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 6908485 - 6908534
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    ||||||||||||||||||||| ||||| |||||||  ||| |||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaataggggggaaagtgcaattaa 6908534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 9412028 - 9412076
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| ||||||||||||  | |||||||||||||||||||||    
T  9412028 aattgcacttttcccccttatcttt-tgttaattgtgcgattttgcaccc 9412076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 18925279 - 18925230
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    ||||| ||||||||||| |||||||  || ||||||||||||||||||||    
T  18925279 aattgaacttttgccccctatctttttgccaattgtgcgattttgcaccc 18925230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 500
Target Start/End: Original strand, 20419324 - 20419381
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagccttt 500  Q
    ||||||||||||||||||||| |||||  ||| |||| |||| |||||||||||||||    
T  20419324 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccttt 20419381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 3205093 - 3205149
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||||||||||| |||||  ||| |||| |||| ||||||||||||||    
T  3205093 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 3205149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 17157021 - 17156965
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||||||||||| |||||  ||| |||| |||| ||||||||||||||    
T  17157021 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 17156965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 497
Target Start/End: Complemental strand, 18925114 - 18925062
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaagatagggga-aaaaatgcaattaagcc 497  Q
    |||||||||| ||||||||| |||||||||||| | |||| ||||||||||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagcc 18925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 496
Target Start/End: Original strand, 18925322 - 18925373
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagc 496  Q
    |||||||||||||||||||||| ||||| |||| || |||| |||||||||||    
T  18925322 ggggtgcaaaatcgcacaattagcaaaatatagagg-aaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 22740210 - 22740154
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    ||||||||||||||||||||| |||||  ||| |||| |||| ||||||||||||||    
T  22740210 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctt 22740154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 476
Target Start/End: Original strand, 34235978 - 34236010
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatag 476  Q
    |||||||||||||||||||||| ||||||||||    
T  34235978 ggggtgcaaaatcgcacaattagcaaaagatag 34236010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 493
Target Start/End: Complemental strand, 38191435 - 38191387
Alignment:
Q  446 ggtgcaaaatcgcacaattaacaaaa-gataggggaaaaaatgcaatta 493  Q
    |||||||||||||||||||  ||||| ||||||||||||| ||||||||    
T  38191435 ggtgcaaaatcgcacaattggcaaaaagataggggaaaaagtgcaatta 38191387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 93; Significance: 5e-45; HSPs: 4)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 6679 - 6575
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  6679 attttgcaccccatctttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcgatttt 6580  T
Q  315 gcacc 319  Q
    |||||    
T  6579 gcacc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 6697 - 6750
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  6697 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 6448 - 6392
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  6448 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctt 6392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 6399 - 6447
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  6399 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 6447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 89; Significance: 1e-42; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 25351 - 25247
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  25351 attttgcaccccatctttttgccccatttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcgatttt 25252  T
Q  315 gcacc 319  Q
    |||||    
T  25251 gcacc 25247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 25369 - 25425
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  25369 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctt 25425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 25418 - 25370
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  25418 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 25370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 87; Significance: 2e-41; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 215 - 321
Target Start/End: Complemental strand, 45789 - 45683
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  45789 attttgcaccccatctttttgccccctttctgattttgcacctcatctttgtgttcaattgcacttttgtcccttatctttttgctaattgtgcgatttt 45690  T
Q  315 gcaccct 321  Q
    |||||||    
T  45689 gcaccct 45683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 45642 - 45535
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn-gaggg-gtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaat 491  Q
    ||||||||||||||||||||||||||||||||||||||||         ||||| ||||||||||||||||||||||||||||||||| |||| ||||||    
T  45642 acaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggagtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaat 45543  T
Q  492 taagcctt 499  Q
    ||||||||    
T  45542 taagcctt 45535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 444 - 498
Target Start/End: Original strand, 45807 - 45861
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcct 498  Q
    |||||||||||||||||||||  ||||||||||||| |||| |||||||||||||    
T  45807 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaagcct 45861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 411993 - 412090
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatt 312  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  411993 attttgcaccctatctttttgccccctttctgattttgcaccctatctttgtgttcaattgcacttttgccccctatctttttgctaattgtgcgatt 412090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 411976 - 411923
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||    
T  411976 ggggtgcaaaatcgcacaattgacaaaagatagggggtaaagtgcaattaagcc 411923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 222 - 320
Target Start/End: Complemental strand, 6850 - 6752
Alignment:
Q  222 accccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |  ||||||||||||    
T  6850 accccatctttttgctccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatttttttgctaattctatgattttgcaccc 6752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 479
Target Start/End: Complemental strand, 6710 - 6626
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngaggggtgcaaaatcgcacaattaacaaaagatagggg 479  Q
    |||||||||||||||||||||||||||||||||||||||         ||| ||||||||||| ||||||||||||||||||||||    
T  6710 acaaaacacagttggcaaaagatagggtgcaaaatcgct-aaaaaaaagagaggtgcaaaatcacacaattaacaaaagatagggg 6626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 215 - 322
Target Start/End: Original strand, 16925 - 17032
Alignment:
Q  215 attttgcaccccatccttttgccccctttctgattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgatttt 314  Q
    ||||||||||||||| |||| | |||||||||||||||||| || ||||| |||||||||||||||||| ||| |||||||   |||||||| |||||||    
T  16925 attttgcaccccatctttttcctccctttctgattttgcactccgtctttttgttcaattgcacttttgtcccctatcttttctctaattgtacgatttt 17024  T
Q  315 gcaccctc 322  Q
    ||||||||    
T  17025 gcaccctc 17032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 497
Target Start/End: Original strand, 17103 - 17209
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnn--gagg-ggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaa 490  Q
    |||||||||| |||||||||||| ||||||||||||||||          |||| |||||||||| ||||||||| ||||||||||||| |||| |||||    
T  17103 acaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaaaaaaagaggcggtgcaaaattgcacaattagcaaaagatagggggaaaagtgcaa 17202  T
Q  491 ttaagcc 497  Q
    |||||||    
T  17203 ttaagcc 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 16905 - 16853
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    |||||||| ||||||||||||| |||||||||||||| |||| |||||||||||    
T  16905 ggggtgcataatcgcacaattagcaaaagatagggga-aaaaggcaattaagcc 16853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 60; Significance: 2e-25; HSPs: 7)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 439001 - 439072
Alignment:
Q  246 gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgca 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  439001 gattttgcaccccatctttgtgttcaattgcacttttgccccttatctttttgctaattgtgcaattttgca 439072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 439151 - 439254
Alignment:
Q  396 aaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngaggggtgcaaaatcgcacaattaacaaaagat-aggggaaaaaatgcaattaa 494  Q
    |||||||| ||| |||||||| ||||||||||||||||          ||| |||||||||||||||||| |||||||| |||||||||| |||||||||    
T  439151 aaaacacaattgacaaaagatggggtgcaaaatcgctcaaaaaaagaggggatgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaa 439250  T
Q  495 gcct 498  Q
    ||||    
T  439251 gcct 439254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Complemental strand, 438984 - 438930
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||| ||||||||| |||| |||| ||||||||||||    
T  438984 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 183416 - 183367
Alignment:
Q  445 gggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaa 494  Q
    ||||||||||||| |||||| |||||||||||||| |||| |||||||||    
T  183416 gggtgcaaaatcgtacaattgacaaaagatagggggaaaagtgcaattaa 183367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 183598 - 183544
Alignment:
Q  263 ttgtgttcaattgcacttttgccccttatctttcagctaattgtgcgattttgca 317  Q
    ||||||| ||||||||||||||||| |||||||   | |||||||||||||||||    
T  183598 ttgtgtttaattgcacttttgccccctatctttttaccaattgtgcgattttgca 183544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 317
Target Start/End: Complemental strand, 439248 - 439203
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgca 317  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||    
T  439248 aattgcactttttccccttatcttt-tgctaattgtgcgattttgca 439203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 438935 - 438983
Alignment:
Q  271 aattgcacttttgccccttatctttcagctaattgtgcgattttgcaccc 320  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||    
T  438935 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 394 - 501
Target Start/End: Complemental strand, 205790 - 205683
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctcnnnnnnnngaggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaatta 493  Q
    |||||||||| ||||||||||||  |||||||||||| ||          |||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  205790 acaaaacacaattggcaaaagatgaggtgcaaaatcgttcaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatagggagaaaaatgcaatta 205691  T
Q  494 agccttta 501  Q
    ||||||||    
T  205690 agccttta 205683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 205861 - 205914
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||| ||||||||| ||||| ||||||  |||||||||||||| ||||    
T  205861 ggggtgcaaaattgcacaattagcaaaatataggg--aaaaatgcaattaaacctt 205914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 444 - 499
Target Start/End: Complemental strand, 7508 - 7453
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||    
T  7508 ggggtgcaaaatcgcataattagcaaaagataggggaaaaagtgcaattaagcctt 7453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 7600 - 7653
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  7600 ggggtacaaaatcgcacaattagcaaaagataggggaaaaagtgcaattaagcc 7653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 6795 - 6849
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagatagggg-aaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  |||||||||||||  |||||||||||||||||    
T  6795 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 763 - 816
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  ||||  |||||||||||| ||||||||||||    
T  763 ggggtgcaaaatcgcacaattggcaaactataggggaaaaagtgcaattaagcc 816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Complemental strand, 10729 - 10690
Alignment:
Q  394 acaaaacacagttggcaaaagatagggtgcaaaatcgctc 433  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  10729 acaaaacacaattggcaaaagatggggtgcaaaatcgctc 10690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 444 - 503
Target Start/End: Complemental strand, 19674 - 19615
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcctttaat 503  Q
    |||||||||||||||||||||  ||||  ||| ||| |||| ||||||||||||||||||    
T  19674 ggggtgcaaaatcgcacaattggcaaactatatggggaaaattgcaattaagcctttaat 19615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 497
Target Start/End: Original strand, 50507 - 50560
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagataggggaaaaaatgcaattaagcc 497  Q
    |||||||||||||||||||||  ||||  ||||||| |||| ||||||||||||    
T  50507 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 50560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 499
Target Start/End: Original strand, 38695 - 38751
Alignment:
Q  444 ggggtgcaaaatcgcacaattaacaaaagata-ggggaaaaaatgcaattaagcctt 499  Q
    |||||||||||||||||||||  ||||  ||| ||||||||| ||||||||||||||    
T  38695 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcctt 38751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University