View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4387_low_11 (Length: 239)
Name: NF4387_low_11
Description: NF4387
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4387_low_11 |
 |  |
|
| [»] chr2 (19 HSPs) |
 |  |
|
Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 19)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 30039208 - 30038970
Alignment:
| Q |
1 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
30039208 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttttaattgtttagagagtgaagaactgaagttgct |
30039109 |
T |
 |
| Q |
101 |
attcttattaattggttcctttggactggattaccgctacactggatcaatttttgtatgttattgggggttgggcttatttagacattctcacaaattg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30039108 |
attcttattaattggttcctttggactggattaccgctacactggaccaattttagtatgttattgggggttgggcttatttagacattctcacaaattg |
30039009 |
T |
 |
| Q |
201 |
gcagatgcaagaatcagattcaacagattaataaatgac |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30039008 |
gcagatgcaagaatcagattcaacagattaataaatgac |
30038970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 30108686 - 30108448
Alignment:
| Q |
1 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
30108686 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttttaattgtttagagagtgaagaactgaagttgct |
30108587 |
T |
 |
| Q |
101 |
attcttattaattggttcctttggactggattaccgctacactggatcaatttttgtatgttattgggggttgggcttatttagacattctcacaaattg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30108586 |
attcttattaattggttcctttggactggattaccgctacactggaccaattttagtatgttattgggggttgggcttatttagacattctcacaaattg |
30108487 |
T |
 |
| Q |
201 |
gcagatgcaagaatcagattcaacagattaataaatgac |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30108486 |
gcagatgcaagaatcagattcaacagattaataaatgac |
30108448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 30233346 - 30233108
Alignment:
| Q |
1 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
30233346 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttttaattgtttagagagtgaagaactgaagttgct |
30233247 |
T |
 |
| Q |
101 |
attcttattaattggttcctttggactggattaccgctacactggatcaatttttgtatgttattgggggttgggcttatttagacattctcacaaattg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30233246 |
attcttattaattggttcctttggactggattaccgctacactggaccaattttagtatgttattgggggttgggcttatttagacattctcacaaattg |
30233147 |
T |
 |
| Q |
201 |
gcagatgcaagaatcagattcaacagattaataaatgac |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30233146 |
gcagatgcaagaatcagattcaacagattaataaatgac |
30233108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 30021487 - 30021725
Alignment:
| Q |
1 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30021487 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
30021586 |
T |
 |
| Q |
101 |
attcttattaattggttcctttggactggattaccgctacactggatcaatttttgtatgttattgggggttgggcttatttagacattctcacaaattg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30021587 |
attcttattaattggttcctttggactggattacctctacactggaccacttttagtatgttattgggggttgggcttatttagacattctcacaaattt |
30021686 |
T |
 |
| Q |
201 |
gcagatgcaagaatcagattcaacagattaataaatgac |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30021687 |
gcagatgcaagaatcagattcaacagattaataaatgac |
30021725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 30079893 - 30080131
Alignment:
| Q |
1 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30079893 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
30079992 |
T |
 |
| Q |
101 |
attcttattaattggttcctttggactggattaccgctacactggatcaatttttgtatgttattgggggttgggcttatttagacattctcacaaattg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
30079993 |
attcttattaattggttcctttggactggattacctctacactggaccactttttgtatgttattgggggttgggcttatttacactttctcacaaattg |
30080092 |
T |
 |
| Q |
201 |
gcagatgcaagaatcagattcaacagattaataaatgac |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30080093 |
gcagatgcaagaatcagattcaacagattaataaatgac |
30080131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 30120704 - 30120466
Alignment:
| Q |
1 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30120704 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
30120605 |
T |
 |
| Q |
101 |
attcttattaattggttcctttggactggattaccgctacactggatcaatttttgtatgttattgggggttgggcttatttagacattctcacaaattg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30120604 |
attcttattaattggttcctttggactggattacctctacactggaccacttttagtatgttattgggggttgggcttatttagacattctcacaaattt |
30120505 |
T |
 |
| Q |
201 |
gcagatgcaagaatcagattcaacagattaataaatgac |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30120504 |
gcagatgcaagaatcagattcaacagattaataaatgac |
30120466 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 30135402 - 30135164
Alignment:
| Q |
1 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30135402 |
atgaattacagagatttgatcaagaagggttgaataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
30135303 |
T |
 |
| Q |
101 |
attcttattaattggttcctttggactggattaccgctacactggatcaatttttgtatgttattgggggttgggcttatttagacattctcacaaattg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30135302 |
attcttattaattggttcctttggactggattacctctacactggaccacttttagtatgttattgggggttgggcttatttagacattctcacaaattt |
30135203 |
T |
 |
| Q |
201 |
gcagatgcaagaatcagattcaacagattaataaatgac |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30135202 |
gcagatgcaagaatcagattcaacagattaataaatgac |
30135164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 68 - 239
Target Start/End: Original strand, 30056024 - 30056195
Alignment:
| Q |
68 |
taattgtttagagagtgaagaactgaagttgctattcttattaattggttcctttggactggattaccgctacactggatcaatttttgtatgttattgg |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30056024 |
taattgtttagagagtgaagaactgaagttgctattcttattaattggttcctttggactggattaccgctacactggaccaatttttgtatgttattgg |
30056123 |
T |
 |
| Q |
168 |
gggttgggcttatttagacattctcacaaattggcagatgcaagaatcagattcaacagattaataaatgac |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30056124 |
gggttgggcttatttagacattctcacaaattggcagatgcaagaatcagattcaacagattaataaatgac |
30056195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 30250417 - 30250651
Alignment:
| Q |
1 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
100 |
Q |
| |
|
|||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30250417 |
atgaattagaaagatttgatcaagaaggattgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaggaactgaagttgct |
30250516 |
T |
 |
| Q |
101 |
attcttattaattggttcctttggactggattaccgctacactggatcaatttttgtatgttattgggggttgggcttatttagacattctcacaaattg |
200 |
Q |
| |
|
|||||| || ||||||||||||||||| |||||| ||||| |||||| || ||| ||| ||||| ||||||||||||||||||||| | ||||| |||| |
|
|
| T |
30250517 |
attcttgttcattggttcctttggactagattacatctacattggatcgatgtttttatattatttggggttgggcttatttagacactatcacacattg |
30250616 |
T |
 |
| Q |
201 |
gcagatgcaagaatcagattcaacagattaataaa |
235 |
Q |
| |
|
| |||||||||||||||||| ||| ||||||||| |
|
|
| T |
30250617 |
acggatgcaagaatcagattctacaaattaataaa |
30250651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30278017 - 30278134
Alignment:
| Q |
1 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
100 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| || ||||| |
|
|
| T |
30278017 |
atgaattagagagatttgatgaagaagggttgcataagaaagtttactctactcttgaattgagttataattgtttagagaatgaggaactaaaattgct |
30278116 |
T |
 |
| Q |
101 |
attcttattaattggttc |
118 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
30278117 |
attcttattcattggttc |
30278134 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 30066703 - 30066941
Alignment:
| Q |
1 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
100 |
Q |
| |
|
|||| ||| |||||||||||||||||||| ||||||||||| | || ||| || ||||||||||||||||||| |||| ||||| || || |||| || |
|
|
| T |
30066703 |
atgagttagagagatttgatcaagaagggctgcataagaaaatatattctgctttggaattgagttataattgcctagaaagtgatgagctaaagtcact |
30066802 |
T |
 |
| Q |
101 |
attcttattaattggttcctttggactggattaccgctacactggatcaatttttgtatgttattgggggttgggcttatttagacattctcacaaattg |
200 |
Q |
| |
|
|||||||| || ||||| |||||||| ||||||| | |||| ||| | | ||| | | ||||||||| ||||||||| |||||| ||||||| |||| |
|
|
| T |
30066803 |
gttcttattcataggttcgtttggactagattacctccacaccggagaactgttttcaagctattgggggatgggcttatatagacactctcacacattg |
30066902 |
T |
 |
| Q |
201 |
gcagatgcaagaatcagattcaacagattaataaatgac |
239 |
Q |
| |
|
|||||||||||| ||||| | || ||||||||||||| |
|
|
| T |
30066903 |
acagatgcaagaaccagatactgcaaattaataaatgac |
30066941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 219
Target Start/End: Original strand, 30788772 - 30788979
Alignment:
| Q |
12 |
agatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgctattcttattaa |
111 |
Q |
| |
|
||||||||| |||||||||||||||||||| | |||||| || | ||||||||||||||||| ||||| ||||| ||||| |||| || |||||||| | |
|
|
| T |
30788772 |
agatttgataaagaagggttgcataagaaaatctactctgctttagaattgagttataattgcttagaaagtgatgaactaaagtcactgttcttattca |
30788871 |
T |
 |
| Q |
112 |
ttggttcctttggactggattaccgctacactggatcaatttttgtatgttattgggggttgggcttatttagacattctcacaaattggcagatgcaag |
211 |
Q |
| |
|
||||||| ||||| || ||| ||| | |||||| | | | ||| ||||||||||||||| |||||||| |||| | |||| || |||| ||||||| || |
|
|
| T |
30788872 |
ttggttcatttggcctagatcacctccacactgcagaactatttttatgttattgggggtcgggcttatatagaaactctcccacattgacagatgcgag |
30788971 |
T |
 |
| Q |
212 |
aatcagat |
219 |
Q |
| |
|
|| ||||| |
|
|
| T |
30788972 |
aaccagat |
30788979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 30169695 - 30169809
Alignment:
| Q |
4 |
aattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgctatt |
103 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||| || || |
|
|
| T |
30169695 |
aattagagagatttgatcaagaaggcttgcataagaaagtttactctaccttggaattgagttataattgtttagaaagtgatgacctgaagtcactctt |
30169794 |
T |
 |
| Q |
104 |
cttattaattggttc |
118 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
30169795 |
tttattcattggttc |
30169809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 30222241 - 30222361
Alignment:
| Q |
10 |
agagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgctattcttatt |
109 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||| |||||||| ||||||||||||||||||||||||| || || || ||||||| || ||| | || |
|
|
| T |
30222241 |
agagatttgatcaacaaggtttgcataagaaagtctactctaccttggaattgagttataattgtttagaaagggatgacctgaagtcactcttcctttt |
30222340 |
T |
 |
| Q |
110 |
aattggttcctttggactgga |
130 |
Q |
| |
|
||||||||| ||||||||||| |
|
|
| T |
30222341 |
aattggttcatttggactgga |
30222361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 30090784 - 30090904
Alignment:
| Q |
10 |
agagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgctattcttatt |
109 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||| |||||||| ||||||||||||||||||||||||| || || || ||||||| || ||| | || |
|
|
| T |
30090784 |
agagatttgatcaacaaggtttgcataagaaagtctactctaccttggaattgagttataattgtttagaaagggatgacctgaagtcactcttcctttt |
30090883 |
T |
 |
| Q |
110 |
aattggttcctttggactgga |
130 |
Q |
| |
|
|||||||| |||||| |||| |
|
|
| T |
30090884 |
cattggttcatttggattgga |
30090904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 30127389 - 30127509
Alignment:
| Q |
10 |
agagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgctattcttatt |
109 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||| |||||||| ||||||||||||||||||||||||| || || || ||||||| || ||| | || |
|
|
| T |
30127389 |
agagatttgatcaacaaggtttgcataagaaagtctactctaccttggaattgagttataattgtttagaaagggatgacctgaagtcactcttcctttt |
30127488 |
T |
 |
| Q |
110 |
aattggttcctttggactgga |
130 |
Q |
| |
|
|||||||| |||||| |||| |
|
|
| T |
30127489 |
cattggttcatttggattgga |
30127509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 30028104 - 30028224
Alignment:
| Q |
10 |
agagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgctattcttatt |
109 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||| |||||||| ||||| ||||||||||||||||||| || || || ||||||| || ||| | || |
|
|
| T |
30028104 |
agagatttgatcaacaaggtttgcatatgaaagtctactctaccttggaactgagttataattgtttagaaagggatgacctgaagtcactcttcctttt |
30028203 |
T |
 |
| Q |
110 |
aattggttcctttggactgga |
130 |
Q |
| |
|
||| |||| ||||||||||| |
|
|
| T |
30028204 |
catttgttcatttggactgga |
30028224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 30101103 - 30101223
Alignment:
| Q |
10 |
agagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgctattcttatt |
109 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||| |||||||| ||||| ||||||||||||||||||| || || || ||||||| || ||| | || |
|
|
| T |
30101103 |
agagatttgatcaacaaggtttgcatatgaaagtctactctaccttggaactgagttataattgtttagaaagggatgacctgaagtcactcttcctttt |
30101202 |
T |
 |
| Q |
110 |
aattggttcctttggactgga |
130 |
Q |
| |
|
||| |||| ||||||||||| |
|
|
| T |
30101203 |
catttgttcatttggactgga |
30101223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30010208 - 30010280
Alignment:
| Q |
1 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattg |
73 |
Q |
| |
|
|||| ||| |||||||||||||||||||| ||||||||||| | || ||| || ||||||||||||||||||| |
|
|
| T |
30010208 |
atgagttagagagatttgatcaagaagggctgcataagaaaatatattctgctttggaattgagttataattg |
30010280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 30272048 - 30272181
Alignment:
| Q |
1 |
atgaattacagagatttgatcaagaagggttgcataagaaagtttactctactctggaattgagttataattgtttagagagtgaagaactgaagttgct |
100 |
Q |
| |
|
|||| ||| |||||||||||||| ||||||||||||||||| | || |||||| ||||||||||||||||||| ||||| ||||| || || |||| || |
|
|
| T |
30272048 |
atgagttagagagatttgatcaaaaagggttgcataagaaaatctattctactttggaattgagttataattgcttagaaagtgacgagctaaagtcact |
30272147 |
T |
 |
| Q |
101 |
attcttattaattggttcctttggactggattac |
134 |
Q |
| |
|
|||||||| |||||||| ||||| || |||||| |
|
|
| T |
30272148 |
cttcttattcattggttcgtttggtctagattac |
30272181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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