View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4388_high_3 (Length: 219)
Name: NF4388_high_3
Description: NF4388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4388_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 5127884 - 5127689
Alignment:
| Q |
16 |
ggaaattggccaaaacttttctaaggaatccatagcgaactttggagacaagagttaggtcagatttcttacgcaatgaagatgatgacatgttatgtgc |
115 |
Q |
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| T |
5127884 |
ggaaattggccaaaacttttctaaggaatccatagcgaactttggagacaagagttaggtcagatttcttacgcaatgaagatgatgacatgttatgtgc |
5127785 |
T |
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| Q |
116 |
tgttctaccatgtttcatagtttctttgctcacaattcctttaatgtttcctccattctctaagaaacatgcttcaaactcataatcatgatgatg |
211 |
Q |
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| T |
5127784 |
tgttctaccatgtttcatagtttctttgctcacaattcctttaatgtttcctccattctctaagaaacatgcttcaaactcataatcatgatgatg |
5127689 |
T |
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