View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4393_high_5 (Length: 212)
Name: NF4393_high_5
Description: NF4393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4393_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 13 - 194
Target Start/End: Complemental strand, 22700347 - 22700166
Alignment:
| Q |
13 |
gtgagatgaagcttgatgaagatcttgatcacaaacttgaccgtgaagatgattttcagacggatgatgaagaaaatcaagcagatagggattttaaaaa |
112 |
Q |
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| T |
22700347 |
gtgaaatgaagcttgatgaagatcttgatcataaacttgaccgtgaagatgattttcaaacggatgatgaagaaaatcaagcagatagggattttaaaaa |
22700248 |
T |
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| Q |
113 |
tcaaatggatgatgatgataccgaatcatcagataataagaattcacctccttcaagatatttatcaaatgaggttgatttt |
194 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
22700247 |
tcaaatggatgatgatgataccgaatcatcagataataagaattcacctccttcaagatattcatcaaatgaggttgatttt |
22700166 |
T |
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