View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4393_low_4 (Length: 357)
Name: NF4393_low_4
Description: NF4393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4393_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 39979200 - 39978969
Alignment:
| Q |
17 |
agtactcaggttaagacacaaagggagagcgagagtgagtgcagttattatacatattcctagtaagtgggagagatatggcgaagtggtgtatgttgtt |
116 |
Q |
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| T |
39979200 |
agtactcaggttaagacacaaagggagagtgagagtgagtgcagttattatacatattcctagtaagtgggagagatatggcgaagtggtgtatgttgtt |
39979101 |
T |
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| Q |
117 |
gttggttcttgctcttgttgtggctacaacaagtgcaagaaatgtaccaactgatgctggtttgaaggaccagaagaacttcatgacatttgctggtggt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39979100 |
gttggttcttgctcttgttgtggctacaacaagtgcaagaaatgtaccaactgatgctggtttgaaggaccagaagaacttcatgacatttgctggtggt |
39979001 |
T |
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| Q |
217 |
tattctggaataggaaacaatggacttccttt |
248 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
39979000 |
tattctggaataggaaacaatggacttccttt |
39978969 |
T |
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