View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4394-Insertion-5 (Length: 139)
Name: NF4394-Insertion-5
Description: NF4394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4394-Insertion-5 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 124; Significance: 4e-64; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 124; E-Value: 4e-64
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 36878405 - 36878535
Alignment:
| Q |
8 |
gaaaggtgctaccagtggtagacccaatggaagacccttcactcgtttagatgcaattaaacaagccattgttcttttcgtcaatgctaaactcaccatc |
107 |
Q |
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| T |
36878405 |
gaaaggtgctaccagtggtagacccaatggaagacccttcactcgtttagatgcaattaaacaagccattgttcttttcgtcaatgctaaactcaccatc |
36878504 |
T |
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| Q |
108 |
aatcctcaacatcgtttttgctttcgctactc |
139 |
Q |
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| T |
36878505 |
aatcctcaacatcg-ttttgctttcgctactc |
36878535 |
T |
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