View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4394_low_6 (Length: 241)

Name: NF4394_low_6
Description: NF4394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4394_low_6
NF4394_low_6
[»] chr5 (10 HSPs)
chr5 (15-210)||(29865990-29866185)
chr5 (15-197)||(4061932-4062114)
chr5 (15-200)||(8128549-8128734)
chr5 (18-203)||(7333055-7333240)
chr5 (169-210)||(7928350-7928391)
chr5 (160-211)||(33014349-33014400)
chr5 (173-210)||(23547478-23547515)
chr5 (176-210)||(4956072-4956106)
chr5 (154-203)||(27594833-27594882)
chr5 (176-212)||(33075674-33075710)
[»] chr8 (20 HSPs)
chr8 (15-210)||(16250155-16250350)
chr8 (15-210)||(23524999-23525194)
chr8 (15-200)||(30369858-30370043)
chr8 (15-193)||(34800608-34800786)
chr8 (15-210)||(37251281-37251476)
chr8 (15-145)||(16313365-16313495)
chr8 (152-203)||(16313856-16313907)
chr8 (173-210)||(8362217-8362254)
chr8 (173-210)||(17884687-17884724)
chr8 (175-210)||(4932142-4932177)
chr8 (169-210)||(15278120-15278161)
chr8 (169-210)||(15458489-15458530)
chr8 (173-210)||(22997423-22997460)
chr8 (169-210)||(23142182-23142223)
chr8 (154-210)||(357272-357328)
chr8 (170-210)||(21589316-21589356)
chr8 (169-212)||(13756201-13756244)
chr8 (169-203)||(41529082-41529116)
chr8 (173-210)||(15630189-15630226)
chr8 (173-210)||(43217951-43217988)
[»] chr6 (13 HSPs)
chr6 (15-210)||(20872244-20872439)
chr6 (49-198)||(9453023-9453172)
chr6 (135-210)||(23410278-23410352)
chr6 (18-89)||(23410208-23410279)
chr6 (169-212)||(4791913-4791956)
chr6 (154-211)||(33350565-33350622)
chr6 (175-210)||(21058867-21058902)
chr6 (173-212)||(29964760-29964799)
chr6 (173-210)||(4848850-4848887)
chr6 (175-210)||(15872588-15872623)
chr6 (154-212)||(21983935-21983993)
chr6 (173-210)||(15683412-15683449)
chr6 (169-210)||(28365452-28365493)
[»] chr4 (11 HSPs)
chr4 (15-200)||(26290114-26290299)
chr4 (15-200)||(55049815-55050000)
chr4 (173-210)||(14248901-14248938)
chr4 (175-210)||(13914875-13914910)
chr4 (173-210)||(42616670-42616707)
chr4 (169-210)||(50814456-50814497)
chr4 (160-204)||(281503-281547)
chr4 (169-203)||(13228360-13228394)
chr4 (170-212)||(39974407-39974449)
chr4 (173-210)||(24183808-24183845)
chr4 (170-203)||(42757967-42758000)
[»] chr3 (18 HSPs)
chr3 (15-211)||(19817521-19817717)
chr3 (175-212)||(10019156-10019193)
chr3 (169-210)||(34854631-34854672)
chr3 (173-210)||(38358065-38358102)
chr3 (173-210)||(6435579-6435616)
chr3 (173-210)||(9261131-9261168)
chr3 (162-203)||(17763837-17763878)
chr3 (162-203)||(19065157-19065198)
chr3 (173-210)||(20776126-20776163)
chr3 (154-210)||(20788204-20788260)
chr3 (154-210)||(30171446-30171502)
chr3 (174-210)||(32976794-32976830)
chr3 (175-210)||(35683479-35683514)
chr3 (169-203)||(50239318-50239352)
chr3 (173-203)||(55367862-55367892)
chr3 (173-210)||(37197730-37197767)
chr3 (169-210)||(42400681-42400722)
chr3 (155-203)||(8893320-8893368)
[»] scaffold0012 (1 HSPs)
scaffold0012 (15-210)||(31140-31335)
[»] scaffold0119 (1 HSPs)
scaffold0119 (15-212)||(40353-40550)
[»] scaffold0268 (1 HSPs)
scaffold0268 (15-210)||(19979-20174)
[»] chr7 (6 HSPs)
chr7 (15-210)||(29912351-29912546)
chr7 (173-211)||(18294101-18294139)
chr7 (173-210)||(33940474-33940511)
chr7 (160-213)||(29502506-29502559)
chr7 (172-210)||(17475019-17475057)
chr7 (172-210)||(17578157-17578195)
[»] chr1 (9 HSPs)
chr1 (15-200)||(17006609-17006794)
chr1 (15-200)||(34159297-34159482)
chr1 (173-211)||(40702369-40702407)
chr1 (154-211)||(19066017-19066074)
chr1 (154-211)||(19113907-19113964)
chr1 (173-210)||(42025523-42025560)
chr1 (154-210)||(22538146-22538202)
chr1 (173-206)||(1366103-1366136)
chr1 (171-203)||(3838460-3838492)
[»] chr2 (9 HSPs)
chr2 (114-210)||(4774913-4775009)
chr2 (173-212)||(27203025-27203064)
chr2 (173-212)||(27858172-27858211)
chr2 (156-203)||(29978111-29978158)
chr2 (169-212)||(41754759-41754802)
chr2 (171-210)||(2593329-2593368)
chr2 (171-210)||(45658148-45658187)
chr2 (154-200)||(24967721-24967767)
chr2 (173-210)||(3573036-3573073)
[»] scaffold0029 (1 HSPs)
scaffold0029 (154-210)||(15677-15733)
[»] scaffold0284 (1 HSPs)
scaffold0284 (169-203)||(3045-3079)
[»] scaffold0229 (1 HSPs)
scaffold0229 (173-206)||(24616-24649)
[»] scaffold0131 (1 HSPs)
scaffold0131 (162-198)||(17329-17365)


Alignment Details
Target: chr5 (Bit Score: 180; Significance: 3e-97; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 15 - 210
Target Start/End: Original strand, 29865990 - 29866185
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29865990 aaccaattctgcttctccacagagtcgatctgagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 29866089  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29866090 aacaaccagacaaatgaaaatgatatcaaatctttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 29866185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 4062114 - 4061932
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4062114 aaccaattctgcttctccacagagtcaatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacagag 4062015  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacggg 197  Q
    ||||| || |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  4062014 aacaaccagacaaatgagaatgatatcaaatctttacttaatattttaaatatcacgaaattctagcccgtacttggcacggg 4061932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 8128549 - 8128734
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||| ||    
T  8128549 aaccaattctgcttctccacagagtcaatctaagctatgataccattgttgggtcttacgagtgagccaacactagcattgattgacccattgcacagag 8128648  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggttt 200  Q
    ||||| || |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8128649 aacaaccagacaaatgagaatgatatcaaatctttacttaatattttaaatatcacgaaattctagcccgtgcttggcacgggttt 8128734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 7333055 - 7333240
Alignment:
Q  18 caattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaagaac 117  Q
    |||||||||||||||| | ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7333055 caattctgcttctccagatagtcgatctgagctataataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacagagaac 7333154  T
Q  118 aatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttcca 203  Q
    || || |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  7333155 aaccagacaaatgagaatgatatcaaatctttacttaatattttaaatatcacgaaattctagctcgtgtttggcacgggtttcca 7333240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 7928391 - 7928350
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7928391 acgaaattctagcccgtgcttggcacgggtttccaagctagt 7928350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 33014349 - 33014400
Alignment:
Q  160 ttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagta 211  Q
    |||||||| ||||||||||||||||||||| |||||||| ||||| ||||||    
T  33014349 ttaaatatgacgaaattctagcccgtgcttagcacgggtgtccaaactagta 33014400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 23547478 - 23547515
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  23547478 aattctagcccgtacttggcacgggtttccaagctagt 23547515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 4956106 - 4956072
Alignment:
Q  176 tctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||| |||||    
T  4956106 tctagcccgtgcttggcacgggtttccaaactagt 4956072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 27594833 - 27594882
Alignment:
Q  154 aatattttaaatatcacgaaattctagcccgtgcttggcacgggtttcca 203  Q
    ||||| |||||| | |||||| ||||||||||||||||||| ||||||||    
T  27594833 aatatattaaatttgacgaaagtctagcccgtgcttggcacaggtttcca 27594882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 33075674 - 33075710
Alignment:
Q  176 tctagcccgtgcttggcacgggtttccaagctagtat 212  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  33075674 tctagcccgtgcttggcacgggtgtccaaactagtat 33075710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 4e-90; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 15 - 210
Target Start/End: Original strand, 16250155 - 16250350
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16250155 aaccaattctgcttctccacagagtcgatctgagctatgatatcattgttgggccttacgagggagccaacactggcatggattgacccattgcacatag 16250254  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| || |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16250255 aacaaccagacaaatgaaaatgatatcaaatctttaattaatattttaaatatcaagaaattctagcccgtgcttggcacgggtttccaagctagt 16250350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 15 - 210
Target Start/End: Complemental strand, 23525194 - 23524999
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||| ||||||| |||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||    
T  23525194 aaccaattatgcttcttcacagagtcgatctgagctatgataccgttgttgggccttacgagagagccaacactagcatggattgacccattgcacagag 23525095  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23525094 aacaaccaaacaaatgaaaatgatatcaaatctttaattaatattttaaatatcacgaaattctaacccgtgcttggcacgggtttccaagctagt 23524999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 30369858 - 30370043
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  30369858 aaccaattctgcttctccacagagtcaatttaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacagag 30369957  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggttt 200  Q
    ||||| || |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30369958 aacaaccagacaaatgagaatgatatcaaatctttacttaatattttaaatatcacgaaattctagcccgtgcttggcacgggttt 30370043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 34800786 - 34800608
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  34800786 aaccaattctgcttctccacagagtcgatatgagctatgataccattgttgggccttacgagggagccaacactgacatggattgacccattgcacagag 34800687  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggca 193  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34800686 aacaaccagacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctaacccgtgcttggca 34800608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 15 - 210
Target Start/End: Original strand, 37251281 - 37251476
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||| |||||||||| | |||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37251281 aaccaattttgcttctccatatagtctattttagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacagag 37251380  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| || |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37251381 aacaaccagacaaatgagaatgatatcaaatctttacttaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 37251476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 16313365 - 16313495
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16313365 aaccaattctgcttctccacagagtcgatctgagctatgatatcattgttgggccttacgagggagccaacactggcatggattgacccattgcacagag 16313464  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaat 145  Q
    |||||  | |||||||| |||||||||||||    
T  16313465 aacaactagacaaatgataatgatatcaaat 16313495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 152 - 203
Target Start/End: Original strand, 16313856 - 16313907
Alignment:
Q  152 ttaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttcca 203  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16313856 ttaatattttaaatatcacgaaattctagcccgtgcttagcacgggtttcca 16313907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 8362217 - 8362254
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8362217 aattctagcccgtgcttggcacgggtttccaagctagt 8362254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 17884724 - 17884687
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17884724 aattctagcccgtgcttggcacgggtttccaagctagt 17884687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 4932142 - 4932177
Alignment:
Q  175 ttctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||||||||||    
T  4932142 ttctagcccgtgcttggcacgggtttccaagctagt 4932177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 15278120 - 15278161
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  15278120 acgaaattctagcccgtgcttggcacgagtttccatgctagt 15278161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 15458489 - 15458530
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  15458489 acgaaattctagcccgtgcttggcacgagtttccatgctagt 15458530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 22997423 - 22997460
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  22997423 aattcaagcccgtgcttggcacgggtttccaagctagt 22997460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 23142182 - 23142223
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  23142182 acgaaattctagcccgtgcttggcacgggtgtccatgctagt 23142223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 357328 - 357272
Alignment:
Q  154 aatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| |||||| | |||||| ||||||||||||||||||| |||||||| ||||||    
T  357328 aatatattaaatttgacgaaagtctagcccgtgcttggcacaggtttccatgctagt 357272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 21589316 - 21589356
Alignment:
Q  170 cgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  21589316 cgaaattctagcccgtgcttggcacgggtgtccaaactagt 21589356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 13756244 - 13756201
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttccaagctagtat 212  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||    
T  13756244 acgaaattttagcccgtgcttggcacgggtgtccatgctagtat 13756201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 41529082 - 41529116
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttcca 203  Q
    |||||||||||||||||||||||||||||| ||||    
T  41529082 acgaaattctagcccgtgcttggcacgggtgtcca 41529116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 15630226 - 15630189
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  15630226 aattctagcacgtgcttggcacgggtttccatgctagt 15630189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 43217951 - 43217988
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  43217951 aattctagctcgtgcttggcacgggtttccatgctagt 43217988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 5e-83; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 15 - 210
Target Start/End: Complemental strand, 20872439 - 20872244
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||||||||| |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20872439 aaccaattctgcttttccacatagtcgatctgagctatgataccattgttaggccttacgagggagccaacactggcatggattaacccattgcacaaag 20872340  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| || |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20872339 aacaaccagacaaatgagaatgatatcaaatatttacttaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttctaagctagt 20872244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 198
Target Start/End: Original strand, 9453023 - 9453172
Alignment:
Q  49 ctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaagaacaatcaaacaaatgaaaatgatatcaaatatt 148  Q
    |||||| ||||| ||||||||||| |||| |||||||||||| ||| |||||||||||||| | ||| ||| ||||||||||| || |||||||||| ||    
T  9453023 ctatgacaccatcgttgggccttatgaggaagccaacactggtatgtattgacccattgcatagagagcaaccaaacaaatgagaacgatatcaaatctt 9453122  T
Q  149 taattaatattttaaatatcacgaaattctagcccgtgcttggcacgggt 198  Q
    || ||| |||||||| ||||| ||||||||||| | | ||||||||||||    
T  9453123 tacttagtattttaagtatcatgaaattctagctcatacttggcacgggt 9453172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 23410278 - 23410352
Alignment:
Q  135 tgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23410278 tgatatcaaatctttaattaatattttaa-tatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 23410352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 23410208 - 23410279
Alignment:
Q  18 caattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactg 89  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  23410208 caattctgcttctccacatagtcgatctgagctatgatactattgttgggccttacaagggagccaacactg 23410279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 4791913 - 4791956
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttccaagctagtat 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  4791913 acgaaattctagcccgtgcttggcacgggtttccaagctagtat 4791956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 33350565 - 33350622
Alignment:
Q  154 aatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagta 211  Q
    ||||| |||||| | |||||| |||||||||||||||||||||||||||| |||||||    
T  33350565 aatatattaaatttgacgaaagtctagcccgtgcttggcacgggtttccatgctagta 33350622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 21058867 - 21058902
Alignment:
Q  175 ttctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||||||||||    
T  21058867 ttctagcccgtgcttggcacgggtttccaagctagt 21058902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 29964799 - 29964760
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagtat 212  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  29964799 aattctagcccgtgcttggcacgggtttccaaactagtat 29964760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 4848887 - 4848850
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  4848887 aattctagctcgtgcttggcacgggtttccaagctagt 4848850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 15872623 - 15872588
Alignment:
Q  175 ttctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||| ||||||||||||||||    
T  15872623 ttctagcccgtgcttggcatgggtttccaagctagt 15872588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 21983993 - 21983935
Alignment:
Q  154 aatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagtat 212  Q
    ||||| |||||| | |||||| |||||||| ||||||||||||||||| | ||||||||    
T  21983993 aatatattaaatttgacgaaagtctagcccatgcttggcacgggtttcaatgctagtat 21983935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 15683412 - 15683449
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  15683412 aattctagctcgtgcttggcacgggtttccaacctagt 15683449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 28365493 - 28365452
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    |||| ||||||||||||||||||||||||| |||| ||||||    
T  28365493 acgacattctagcccgtgcttggcacgggtgtccatgctagt 28365452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 8e-82; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 26290114 - 26290299
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  26290114 aaccaattctgcttctccacagagtcaatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgatccattgcacagag 26290213  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggttt 200  Q
    ||||| || |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26290214 aacaaccagacaaatgagaatgatatcaaatctttacttaatattttaaatatcacgaaattctagcccgtgcttggcacgggttt 26290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 55050000 - 55049815
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  55050000 aaccaattctgcttctccacagagtcaatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacagag 55049901  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggttt 200  Q
    ||||| || |||||||| ||||||||||||| |||| |||||||||||||||||| ||||||||||||| | |||| |||| ||||    
T  55049900 aacaaccagacaaatgagaatgatatcaaatctttacttaatattttaaatatcatgaaattctagcccatacttgacacgagttt 55049815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 14248938 - 14248901
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14248938 aattctagcccgtgcttggcacgggtttccaagctagt 14248901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 13914910 - 13914875
Alignment:
Q  175 ttctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||||||||||    
T  13914910 ttctagcccgtgcttggcacgggtttccaagctagt 13914875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 42616670 - 42616707
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  42616670 aattctagcccgtacttggcacgggtttccaagctagt 42616707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 50814497 - 50814456
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  50814497 acgaaattctagcccgtgcttggcacgggtgtccatgctagt 50814456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 281547 - 281503
Alignment:
Q  160 ttaaatatcacgaaattctagcccgtgcttggcacgggtttccaa 204  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||    
T  281547 ttaaatatgacgaaattctagcccgtgcttgacacgggtgtccaa 281503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 13228394 - 13228360
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttcca 203  Q
    |||||||||||||||||||||||||||||| ||||    
T  13228394 acgaaattctagcccgtgcttggcacgggtgtcca 13228360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 39974449 - 39974407
Alignment:
Q  170 cgaaattctagcccgtgcttggcacgggtttccaagctagtat 212  Q
    ||||||||||||||||||||||||||||| | ||| |||||||    
T  39974449 cgaaattctagcccgtgcttggcacgggtgttcaaactagtat 39974407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 24183808 - 24183845
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  24183808 aattctagcccgtgcttggcacgggtgtccatgctagt 24183845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 203
Target Start/End: Original strand, 42757967 - 42758000
Alignment:
Q  170 cgaaattctagcccgtgcttggcacgggtttcca 203  Q
    ||||||||||||||||||||||||||||| ||||    
T  42757967 cgaaattctagcccgtgcttggcacgggtgtcca 42758000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 15 - 211
Target Start/End: Original strand, 19817521 - 19817717
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||| |||| |||||||||||| ||    
T  19817521 aaccaattctgcttctccacagagtcgatctgagctatgataccattgttgggtcgtacgagggagccaacactggcatagattaacccattgcacagag 19817620  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagta 211  Q
    ||||| || |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  19817621 aacaaccagacaaatgaaaatgatatcaaatctttaattaatattttaaacatcacgaaattctaacccgtgcttggcacgggtttccaagctagta 19817717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 212
Target Start/End: Complemental strand, 10019193 - 10019156
Alignment:
Q  175 ttctagcccgtgcttggcacgggtttccaagctagtat 212  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10019193 ttctagcccgtgcttggcacgggtttccaagctagtat 10019156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 34854631 - 34854672
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  34854631 acgaaattctagctcgtgcttggcacgggtttccaagctagt 34854672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 38358065 - 38358102
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38358065 aattctagcccgtgcttggcacgggtttccaagctagt 38358102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 6435616 - 6435579
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  6435616 aattctagcccgtgcttggcacgggtttccatgctagt 6435579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 9261168 - 9261131
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  9261168 aattctagcccgtgcttggcacgggtttccatgctagt 9261131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 17763878 - 17763837
Alignment:
Q  162 aaatatcacgaaattctagcccgtgcttggcacgggtttcca 203  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  17763878 aaatatgacgaaattctagcccgtgcttggcacgggtgtcca 17763837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 19065198 - 19065157
Alignment:
Q  162 aaatatcacgaaattctagcccgtgcttggcacgggtttcca 203  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  19065198 aaatatgacgaaattctagcccgtgcttggcacgggtgtcca 19065157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 20776163 - 20776126
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  20776163 aattctagcccatgcttggcacgggtttccaagctagt 20776126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 20788260 - 20788204
Alignment:
Q  154 aatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| |||||| | |||||| |||||||||||||||||||||||||| | ||||||    
T  20788260 aatatattaaatttgacgaaagtctagcccgtgcttggcacgggtttcaatgctagt 20788204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 30171446 - 30171502
Alignment:
Q  154 aatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| |||||| | |||||| |||| ||||| ||||||||||||||||||||||||    
T  30171446 aatatattaaatttgacgaaagtctaacccgtacttggcacgggtttccaagctagt 30171502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 32976794 - 32976830
Alignment:
Q  174 attctagcccgtgcttggcacgggtttccaagctagt 210  Q
    |||||||||||||||||||||||||||||| ||||||    
T  32976794 attctagcccgtgcttggcacgggtttccatgctagt 32976830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 35683514 - 35683479
Alignment:
Q  175 ttctagcccgtgcttggcacgggtttccaagctagt 210  Q
    |||||||| |||||||||||||||||||||||||||    
T  35683514 ttctagcctgtgcttggcacgggtttccaagctagt 35683479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 50239352 - 50239318
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttcca 203  Q
    |||||||||||||||||||||||||||||| ||||    
T  50239352 acgaaattctagcccgtgcttggcacgggtgtcca 50239318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 203
Target Start/End: Complemental strand, 55367892 - 55367862
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttcca 203  Q
    |||||||||||||||||||||||||||||||    
T  55367892 aattctagcccgtgcttggcacgggtttcca 55367862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 37197730 - 37197767
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  37197730 aattctagcccgtgcttggtacgggtttccaaactagt 37197767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 42400681 - 42400722
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    |||| ||||||||||||||||||||||||| |||| ||||||    
T  42400681 acgacattctagcccgtgcttggcacgggtgtccatgctagt 42400722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Complemental strand, 8893368 - 8893320
Alignment:
Q  155 atattttaaatatcacgaaattctagcccgtgcttggcacgggtttcca 203  Q
    ||||||||||| | ||||||||||||||||| |||| ||||||| ||||    
T  8893368 atattttaaatttgacgaaattctagcccgtacttgacacgggtatcca 8893320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 15 - 210
Target Start/End: Original strand, 31140 - 31335
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||| ||||||| |||||||||||||| | ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  31140 aaccaattatgcttcttcacagagtcgatctgacctatgataccattcttgggccttatgagggagccaacactggcatggattgacccattgcacagag 31239  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||  || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31240 aacatccagacaaatgaaaatgatatcaaatctttaattaatattttaaatatcacgaaattctagcccgtgtttggcacgggtttccaagctagt 31335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 15 - 212
Target Start/End: Complemental strand, 40550 - 40353
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||||||||| |||||| ||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40550 aaccaattctgcttttccacatagtcgatctgagctatgatatcattgttaggccttacgagggagccaacactggcatggattgacccattgcacagag 40451  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagtat 212  Q
    ||||| || |||||| | ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40450 aacaaccagacaaataagaatgatatcaaatctttacttaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttctaagctagtat 40353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 210
Target Start/End: Original strand, 19979 - 20174
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||| |||||||||| | ||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||    
T  19979 aaccaattatgcttctccagatagtcgatatgagctatgataccattgttgggccttacgaaggagccaacactggcatgggttgacccattgcacagag 20078  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| || ||||| || ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20079 aacaaccagacaaaagagaatgatatcaaatctttacttaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 20174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 15 - 210
Target Start/End: Complemental strand, 29912546 - 29912351
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||    
T  29912546 aaccaattctgcttctccacatagtcgatctgagatatgataccattgttgggccttacaagggagccaacactggcatgaattgacccattgcacagag 29912447  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| |  |||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||  ||||| ||||||||    
T  29912446 aacaaccggacaaatgagaatgatatcaaatctttacttaatattttaaatatcacgaaattctagctcgtgcttggcacaagtttctaagctagt 29912351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 18294101 - 18294139
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagta 211  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18294101 aattctagcccgtgcttggcacgggtttccaagctagta 18294139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 33940474 - 33940511
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33940474 aattctagcccgtgcttggcacgggtttccaagctagt 33940511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 29502506 - 29502559
Alignment:
Q  160 ttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagtatg 213  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||  ||||||||    
T  29502506 ttaagtatgacgaaattctagcccgtgcttggcacgggtgtccatactagtatg 29502559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 17475019 - 17475057
Alignment:
Q  172 aaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  17475019 aaattctagcccgtgcttggcacgggtgtccatgctagt 17475057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 17578195 - 17578157
Alignment:
Q  172 aaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  17578195 aaattctagcccgtgcttggcacgggtgtccatgctagt 17578157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 15 - 200
Target Start/End: Original strand, 17006609 - 17006794
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||    
T  17006609 aaccaattctgcttctccacagagtcaatataagctatgataccattgttgggccttacgagggagccaacactgacatggattgacccattgcagagag 17006708  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggttt 200  Q
    ||||| || |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| | ||| ||| |||||||||    
T  17006709 aacaaccagacaaatgagaatgatatcaaatctttacttaatattttaaatatcacgaaattctagtctgtgtttgacacgggttt 17006794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 15 - 200
Target Start/End: Complemental strand, 34159482 - 34159297
Alignment:
Q  15 aaccaattctgcttctccacagagtcgatctaagctatgataccattgttgggccttacgagggagccaacactggcatggattgacccattgcacaaag 114  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||  ||| ||||||||||||||||| ||    
T  34159482 aaccaattttgcttctccacagagtcaatctaagctatgataccattgttgggtcttacgagtgagccaacactttcattgattgacccattgcacagag 34159383  T
Q  115 aacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggttt 200  Q
    ||||| || |||||||| |||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34159382 aacaaccagacaaatgagaatgatattaaatctttacttaatattttaaatatcacgaaattctagcccgtgcttgacacgggttt 34159297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 40702369 - 40702407
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagta 211  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40702369 aattctagcccgtgcttggcacgggtttccaagctagta 40702407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 19066017 - 19066074
Alignment:
Q  154 aatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagta 211  Q
    ||||| |||||| | |||||| |||||||||||||||||||||||||||| |||||||    
T  19066017 aatatattaaatttgacgaaagtctagcccgtgcttggcacgggtttccatgctagta 19066074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 19113907 - 19113964
Alignment:
Q  154 aatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagta 211  Q
    ||||| |||||| | |||||| |||||||||||||||||||||||||||| |||||||    
T  19113907 aatatattaaatttgacgaaagtctagcccgtgcttggcacgggtttccatgctagta 19113964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 42025560 - 42025523
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42025560 aattctagcccgtgcttggcacgggtttccaagctagt 42025523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 22538202 - 22538146
Alignment:
Q  154 aatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| |||||| | |||||| |||||| ||||||||||||||||||||| ||||||    
T  22538202 aatatattaaatttgacgaaagtctagctcgtgcttggcacgggtttccatgctagt 22538146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 1366103 - 1366136
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagc 206  Q
    ||||||||||||||||||||||| ||||||||||    
T  1366103 aattctagcccgtgcttggcacgagtttccaagc 1366136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 3838460 - 3838492
Alignment:
Q  171 gaaattctagcccgtgcttggcacgggtttcca 203  Q
    |||||||||||||||||||||||||||| ||||    
T  3838460 gaaattctagcccgtgcttggcacgggtatcca 3838492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 114 - 210
Target Start/End: Original strand, 4774913 - 4775009
Alignment:
Q  114 gaacaatcaaacaaatgaaaatgatatcaaatatttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    |||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4774913 gaacaaccagacaaatgaaaatgatatcaaatctttaattaatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagttagt 4775009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 27203064 - 27203025
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagtat 212  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  27203064 aattctagcccgtgcttggcacggatttccaagctagtat 27203025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 27858211 - 27858172
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagtat 212  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  27858211 aattctagcccgtgcttggcacggatttccaagctagtat 27858172  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 29978111 - 29978158
Alignment:
Q  156 tattttaaatatcacgaaattctagcccgtgcttggcacgggtttcca 203  Q
    |||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  29978111 tattttaagtatcacgaaattctagcccgtgtttggcacgggtgtcca 29978158  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 41754759 - 41754802
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttccaagctagtat 212  Q
    |||||||||||||||||||||||||||||| |||| ||||||||    
T  41754759 acgaaattctagcccgtgcttggcacgggtgtccatgctagtat 41754802  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 2593329 - 2593368
Alignment:
Q  171 gaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    |||||||||||||||||||||||||||| ||||| |||||    
T  2593329 gaaattctagcccgtgcttggcacgggtgtccaaactagt 2593368  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 45658187 - 45658148
Alignment:
Q  171 gaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  45658187 gaaattctagcccgtgcttagcacgggtttccatgctagt 45658148  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 24967767 - 24967721
Alignment:
Q  154 aatattttaaatatcacgaaattctagcccgtgcttggcacgggttt 200  Q
    ||||| |||||| | |||||| |||||||||||||||||||||||||    
T  24967767 aatatgttaaatttgacgaaagtctagcccgtgcttggcacgggttt 24967721  T

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Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 3573036 - 3573073
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  3573036 aattcaagcccgtgcttggcacgggtttccaaactagt 3573073  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 15677 - 15733
Alignment:
Q  154 aatattttaaatatcacgaaattctagcccgtgcttggcacgggtttccaagctagt 210  Q
    ||||| |||||| | |||||| |||||||||||||||||| ||||||||| ||||||    
T  15677 aatatattaaatttgacgaaagtctagcccgtgcttggcatgggtttccatgctagt 15733  T

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Target: scaffold0284 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 3045 - 3079
Alignment:
Q  169 acgaaattctagcccgtgcttggcacgggtttcca 203  Q
    |||||||||||||||||||||||||||||| ||||    
T  3045 acgaaattctagcccgtgcttggcacgggtgtcca 3079  T

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Target: scaffold0229 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 24649 - 24616
Alignment:
Q  173 aattctagcccgtgcttggcacgggtttccaagc 206  Q
    ||||||||||||||||||||||| ||||||||||    
T  24649 aattctagcccgtgcttggcacgagtttccaagc 24616  T

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Target: scaffold0131 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 17365 - 17329
Alignment:
Q  162 aaatatcacgaaattctagcccgtgcttggcacgggt 198  Q
    |||||| |||||||||||||||||| |||||||||||    
T  17365 aaatatgacgaaattctagcccgtgtttggcacgggt 17329  T

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