View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4397-Insertion-12 (Length: 185)
Name: NF4397-Insertion-12
Description: NF4397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4397-Insertion-12 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 166; Significance: 4e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 166; E-Value: 4e-89
Query Start/End: Original strand, 8 - 185
Target Start/End: Original strand, 55666341 - 55666518
Alignment:
| Q |
8 |
ggaagaatgatgagaactgcgcgctgttgaggttgaagaagaatctcacgtaagggctaggtcgcaacaatcaagatgtaaaggaactatgatttgggaa |
107 |
Q |
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| T |
55666341 |
ggaagaatgatgagaactgcgcgctgttgaggttgaagaagaatctcacgtaagggctaggtcgcaacaatcaagaagtaaaggaactatgatttgggaa |
55666440 |
T |
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| Q |
108 |
acgtacaattctaactgagagaaataaggggttttgagagtgtttgaatgagagatactatatttacatatgggtttg |
185 |
Q |
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| T |
55666441 |
acgtacaattctaactgagagaaataaggggttttgagcgtgtttgagtgagagatactatatttacatatgggtttg |
55666518 |
T |
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