View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4397-Insertion-8 (Length: 375)
Name: NF4397-Insertion-8
Description: NF4397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4397-Insertion-8 |
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Alignment Details
Target: chr5 (Bit Score: 328; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 8 - 371
Target Start/End: Original strand, 2944194 - 2944557
Alignment:
| Q |
8 |
ggatgaccaaatagcaacaaattaatttaaaggggagtgatataaagcgtggcctttgcataaaaattgctgaagattaggaaaaaacactgaagagaat |
107 |
Q |
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| T |
2944194 |
ggatgaccaattagcaacaaattaatttaaaggggagtgatataaagcgtggtctttgcataaaaattgctgaagattaggaaaaaacactgaagagaat |
2944293 |
T |
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| Q |
108 |
gaacaatggcacaacagttgaaccagataatgtaactatcgaggcattaaacggtctaatagagaaaggcataagatagctcctaaaattgtttaacaag |
207 |
Q |
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| T |
2944294 |
gaacaatggcacaacagttgaaccagatagtgtaactatcgaggcattaaacgatctaatagaggaaggcataagatagctcctaaaattgtttaacaag |
2944393 |
T |
|
| Q |
208 |
aatgtgagctctaagaaagtgaatgagaagcaccttaatcccaacatatatgaacaagggggtataccaaactgtgataactatctcttgaggaatacta |
307 |
Q |
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| T |
2944394 |
aatgtgagctctaagaaagtgaatgagaagcactttaatccctacatatatgaacaagggggtataccaaactgtgataactatctcttgaggaatacta |
2944493 |
T |
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| Q |
308 |
ttctgttttaattgagtggagattacacaacagttccgtagtatcgctttactaatggtagcac |
371 |
Q |
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| T |
2944494 |
ttgtgttttaattgagtggagattacacaacagttccgtagtatcgctttactaatgatagcac |
2944557 |
T |
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