View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4397_high_10 (Length: 286)
Name: NF4397_high_10
Description: NF4397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4397_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 16 - 272
Target Start/End: Original strand, 7476792 - 7477049
Alignment:
| Q |
16 |
aaaaggtatgcatgtttttattagaggacatgtaattgacacatcaactaataatgaatgcaagaattgccgcgttgccattaaagaattcaagaaataa |
115 |
Q |
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| T |
7476792 |
aaaaggtatgcatgtttttattagaggacatgtaattgacacatcaactaataatgaatgcaagaattgccgcgttgccattaaagaattcaagaaataa |
7476891 |
T |
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| Q |
116 |
aatatggtgtcgaataagatcaacacatgcatgttat-aaactctaatggcagcatataatattcccaaatgatcgtaacagtgatagagatgccaaagt |
214 |
Q |
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| T |
7476892 |
aatatggtgtcgaataagatcaacacatgcatgttataaaactctaatggcagcatataatattcccaaatgatcgtaacagtgatagagatgccaaagt |
7476991 |
T |
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| Q |
215 |
ctaatatgacataagatcatttgtttttatcaataagtattaattaattagttagaga |
272 |
Q |
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| T |
7476992 |
ctaatatgacataagatcatttgtttttatcaataagtattaattaattagttagaga |
7477049 |
T |
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