View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4402_high_43 (Length: 299)
Name: NF4402_high_43
Description: NF4402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4402_high_43 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 41739675 - 41739425
Alignment:
| Q |
30 |
ttatactaccatgttaagattattgaagcaatgagagacttgagttggtcttcaagaaataaaggttggtagcaattcttgttgaattgtccatgacttg |
129 |
Q |
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| T |
41739675 |
ttatactaccatgttaagattattgaagcaatgagagacttgagttggtcttcaagaaataaaggttggtagcaattcttgttgaagtgtgcatgacttg |
41739576 |
T |
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| Q |
130 |
caccgtaccggtcattgtcgcattcaagaatccttgtttatgtcaatgcaagtttaggaacttgattgaacatttgattaatcgagcttaattttaaggt |
229 |
Q |
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| T |
41739575 |
caccgtaccggtcattgtcgcattcaagaatccttgtttatgtcaatgcaagtttaggaacttgattgaacatttgattaatcgagcttaattttaaggt |
41739476 |
T |
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| Q |
230 |
tgattaaacattgaggcggtcaaacttaaacaattcacttgtattcataat |
280 |
Q |
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|||| |||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
41739475 |
tgataaaacattgaggcggtcaaacttaaacgattcacttgtattcataat |
41739425 |
T |
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