View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4402_high_72 (Length: 209)
Name: NF4402_high_72
Description: NF4402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4402_high_72 |
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Alignment Details
Target: chr7 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 8 - 192
Target Start/End: Original strand, 25015266 - 25015452
Alignment:
| Q |
8 |
aggagcagagaagaaggcaatttgtctgcaatatttgaagtaacaatcagcaaacagaatcaaatcaatccagaatcaaatattnnnnnnnnnnnnnnn- |
106 |
Q |
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|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25015266 |
aggaccagtgaagaaggcaatttgtctgcaatatttgaagtaacaatcagcaaacagaatcaaatcaatccagaatcaaatattaaaaaaaataaaaaaa |
25015365 |
T |
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| Q |
107 |
-cataattaaattgtatgaaacaatgattcaaatataaacaagggtgcaataagttcattggattccttactctgtgagaaagctca |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25015366 |
tcataattaaattgtatgaaacaatgattcaaatataaacaagggtgcaataagttcattggattccttactctgtgagaaagctca |
25015452 |
T |
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