View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4402_low_23 (Length: 471)

Name: NF4402_low_23
Description: NF4402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4402_low_23
NF4402_low_23
[»] chr5 (4 HSPs)
chr5 (3-462)||(35946380-35946839)
chr5 (110-242)||(10321719-10321851)
chr5 (137-242)||(22587112-22587217)
chr5 (136-231)||(22598923-22599018)
[»] chr7 (5 HSPs)
chr7 (135-280)||(25194150-25194295)
chr7 (335-459)||(38024629-38024758)
chr7 (88-242)||(3958198-3958351)
chr7 (345-459)||(5952852-5952971)
chr7 (135-242)||(23071917-23072024)
[»] chr6 (5 HSPs)
chr6 (345-459)||(7022802-7022921)
chr6 (110-256)||(30045288-30045434)
chr6 (345-457)||(34252294-34252411)
chr6 (335-448)||(26292238-26292356)
chr6 (167-236)||(5467197-5467266)
[»] chr1 (5 HSPs)
chr1 (345-459)||(5171242-5171361)
chr1 (66-232)||(32025044-32025210)
chr1 (66-232)||(32025340-32025506)
chr1 (335-459)||(6771000-6771129)
chr1 (347-459)||(39989296-39989414)
[»] chr3 (5 HSPs)
chr3 (89-256)||(13843747-13843914)
chr3 (345-459)||(29018572-29018693)
chr3 (129-204)||(2706394-2706469)
chr3 (345-381)||(55428922-55428958)
chr3 (419-459)||(55428995-55429035)
[»] chr2 (8 HSPs)
chr2 (110-256)||(26533416-26533562)
chr2 (66-293)||(44279099-44279326)
chr2 (347-460)||(9388837-9388955)
chr2 (357-457)||(9992899-9993004)
chr2 (88-200)||(27187099-27187211)
chr2 (88-200)||(27836641-27836753)
chr2 (88-200)||(27836913-27837025)
chr2 (110-256)||(21088918-21089063)
[»] chr4 (7 HSPs)
chr4 (58-285)||(19987731-19987956)
chr4 (66-242)||(18936218-18936393)
chr4 (151-258)||(18930666-18930773)
chr4 (345-459)||(19816306-19816425)
chr4 (345-441)||(1804532-1804635)
chr4 (345-380)||(21375100-21375135)
chr4 (9-38)||(41206486-41206515)
[»] scaffold0007 (1 HSPs)
scaffold0007 (110-232)||(261962-262084)
[»] chr8 (8 HSPs)
chr8 (335-448)||(8567559-8567677)
chr8 (335-459)||(15917207-15917336)
chr8 (137-256)||(34373729-34373849)
chr8 (112-232)||(15937966-15938086)
chr8 (167-254)||(21397136-21397223)
chr8 (167-254)||(21791629-21791716)
chr8 (66-192)||(21008318-21008446)
chr8 (122-232)||(24195970-24196082)
[»] scaffold1212 (1 HSPs)
scaffold1212 (169-256)||(1968-2055)


Alignment Details
Target: chr5 (Bit Score: 395; Significance: 0; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 3 - 462
Target Start/End: Original strand, 35946380 - 35946839
Alignment:
Q  3 atcggttagataaaagtgtttgatgtggtatttaaggttagcggataannnnnnngggttagactctactcatgggtttaaaccttaacaattggtactc 102  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  35946380 atcggatagataaaagtgtttgatgtggtatttaaggttagcggataatttttttgggttagactctactcatgggtttaaaccttaacaattggtactc 35946479  T
Q  103 tcgtagtgagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggct 202  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35946480 tcgtagtgagctggatcagggaaatggctacttataagttggattaaagtgctccaacgaacactgataggtgagagaagcctccaaaaaagaaagggct 35946579  T
Q  203 actatcgggttaatgtcggtagagtgaaagtcgtcgtggatgtcagcttttaaaagacatgacaatgtcagaagtcccgcatcaggtagattaggaatcc 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||    
T  35946580 actatcgggttaatgtcggtagagtgaaagtcgtcgtggatgtcagctttttaaagacatgacaatgttagaagtcccgcatcaggtagattaggagtcc 35946679  T
Q  303 aacattaagtagataaaattgtttgatgtggtagaagcattgtgcttagcaagtcaatccgcacactcgttgccttgacagaaggtgaaaaataacaatt 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35946680 aacattaagtagataaaattgtttgatgtggtagaagcattgtgcttagcaagtcaatccgcacactcgttgccttgacagaaggtgaaaaataacaatt 35946779  T
Q  403 caatttcgatgatgcagttggacaatctgactaatcagagaagcatatggatgatgatgt 462  Q
    |||||||||||||||| |||| ||||||||||||||| || |||||||||||||||||||    
T  35946780 caatttcgatgatgcaattgggcaatctgactaatcaaaggagcatatggatgatgatgt 35946839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 242
Target Start/End: Complemental strand, 10321851 - 10321719
Alignment:
Q  110 gagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggctactatcg 209  Q
    |||||||| ||  ||||||||||| |||||| ||||||||||||||||| |||  | ||||||||||| | |||| ||||||| || || ||||| |||     
T  10321851 gagttggaccacagaaatggctacatataggctggattaaagtgctccaccgattactgataggtgagtgtagccgccaaaaaggatagagctaccatca 10321752  T
Q  210 ggttaatgtcggtagagtgaaagtcgtcgtgga 242  Q
    ||||| || || |||||||||| | ||||||||    
T  10321751 ggttagtgccgatagagtgaaaattgtcgtgga 10321719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 22587217 - 22587112
Alignment:
Q  137 taggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtcgt 236  Q
    ||||||||||||| |||| ||| |||| | ||||||||||| |||||  ||||||| |||||||| || ||| ||| | || || ||||| ||||| |||    
T  22587217 taggttggattaaggtgcgccaccgaatactgataggtgagtgaagctgccaaaaaggaaagggcaaccatcaggtcagtgccgatagagggaaagacgt 22587118  T
Q  237 cgtgga 242  Q
    ||||||    
T  22587117 cgtgga 22587112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 22599018 - 22598923
Alignment:
Q  136 ataggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaa 231  Q
    |||||||||||||| ||| |||| |||| | |||||| |||| |||| |  |||||| ||||||||||| ||||||| | || || ||||||||||    
T  22599018 ataggttggattaaggtgttccaccgaatactgatagatgagtgaagtcgtcaaaaaggaaagggctaccatcgggtcagtgccgatagagtgaaa 22598923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 135 - 280
Target Start/End: Original strand, 25194150 - 25194295
Alignment:
Q  135 tataggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtc 234  Q
    |||||| ||||||||||||||||| |||| | ||||||||||| |||||||||||||| ||||||||||| || | |||| ||||| |||||||||||||    
T  25194150 tataggctggattaaagtgctccaccgaatactgataggtgagtgaagcctccaaaaaggaaagggctaccattgagttagtgtcgatagagtgaaagtc 25194249  T
Q  235 gtcgtggatgtcagcttttaaaagacatgacaatgtcagaagtccc 280  Q
    | |||||| ||| ||| ||||| | | ||||||||| || ||||||    
T  25194250 gccgtggacgtcggctcttaaagggcgtgacaatgttaggagtccc 25194295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 335 - 459
Target Start/End: Complemental strand, 38024758 - 38024629
Alignment:
Q  335 agaagcattgtgcttagcaagtcaatccgcacactcgttgccttgacagaaggt-----gaaaaataacaattcaatttcgatgatgcagttggacaatc 429  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| || |||     ||||| ||||||| |||| |||||| |||||||||||||||    
T  38024758 agaagcatcatgcttagcaagtcaatccgcacactcgttgccttgacggagggtatgatgaaaattaacaatccaatctcgatgttgcagttggacaatc 38024659  T
Q  430 tgactaatcagagaagcatatggatgatga 459  Q
    ||||||||||||| |||||  |||||||||    
T  38024658 tgactaatcagaggagcatgaggatgatga 38024629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 242
Target Start/End: Complemental strand, 3958351 - 3958198
Alignment:
Q  88 taacaattggtactctcgtagtgagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctcc 187  Q
    ||||||||||| || |||| | |||||||| || ||||| |||||||||||||||||||||| ||| | || |||| | ||||| ||||  ||||||  |    
T  3958351 taacaattggtgctttcgttgagagttggaccacggaaagggctacttataggttggattaaggtgtttcaccgaatactgatatgtgaatgaagcc-gc 3958253  T
Q  188 aaaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtcgtcgtgga 242  Q
    ||||| ||||||||||| |||  |||| || || ||||||||||| || ||||||    
T  3958252 aaaaaggaaagggctaccatcatgttagtgccgatagagtgaaagccgccgtgga 3958198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 459
Target Start/End: Original strand, 5952852 - 5952971
Alignment:
Q  345 tgcttagcaagtcaatccgcacactcgttgccttgacagaagg------tgaaaaataacaattcaatttcgatgatgcagttggacaatctgactaatc 438  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||      ||||||  |||||| |||| |||||| ||||||||||||||||||||||||    
T  5952852 tgcttagcaagccaatctgcacactcgttaccttgac-gaagggtatgctgaaaatgaacaatccaatctcgatgttgcagttggacaatctgactaatc 5952950  T
Q  439 agagaagcatatggatgatga 459  Q
    | || |||||  |||||||||    
T  5952951 ataggagcatgaggatgatga 5952971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 23071917 - 23072024
Alignment:
Q  135 tataggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtc 234  Q
    ||||||||||||||| ||| |||| |||  | ||||||||||| |||||| ||||||  |||| |||||| ||| ||| |  | || ||||||||||| |    
T  23071917 tataggttggattaaggtgttccaccgagtactgataggtgagtgaagccgccaaaagggaaatggctaccatcaggtcagagccgatagagtgaaagcc 23072016  T
Q  235 gtcgtgga 242  Q
    ||||||||    
T  23072017 gtcgtgga 23072024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 9e-28; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 345 - 459
Target Start/End: Complemental strand, 7022921 - 7022802
Alignment:
Q  345 tgcttagcaagtcaatccgcacactcgttgccttgacagaaggt-----gaaaaataacaattcaatttcgatgatgcagttggacaatctgactaatca 439  Q
    ||||||||||||||||||||||||||||||||||||| || |||     ||||| ||||||| |||| |||||| |||||||||||||||||||||||||    
T  7022921 tgcttagcaagtcaatccgcacactcgttgccttgacggagggtatgatgaaaattaacaatccaatctcgatgttgcagttggacaatctgactaatca 7022822  T
Q  440 gagaagcatatggatgatga 459  Q
    ||| |||||  |||||||||    
T  7022821 gaggagcatgaggatgatga 7022802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 110 - 256
Target Start/End: Original strand, 30045288 - 30045434
Alignment:
Q  110 gagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggctactatcg 209  Q
    |||||||| || ||||| |||||| |||||| |||||||| ||| |||| |||| | ||||||||||| |||||| ||||||| ||||||||||| ||||    
T  30045288 gagttggaccacggaaagggctacctataggctggattaaggtgttccaccgaatactgataggtgagtgaagccgccaaaaaggaaagggctaccatcg 30045387  T
Q  210 ggttaatgtcggtagagtgaaagtcgtcgtggatgtcagcttttaaa 256  Q
    ||| | ||||| ||||||||||| ||||||||| ||| ||| |||||    
T  30045388 ggtcagtgtcgatagagtgaaagccgtcgtggaagtcggctcttaaa 30045434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 345 - 457
Target Start/End: Complemental strand, 34252411 - 34252294
Alignment:
Q  345 tgcttagcaagtcaatccgcacactcgttgccttgacagaaggt-----gaaaaataacaattcaatttcgatgatgcagttggacaatctgactaatca 439  Q
    ||||||||||| |||||||||||| |||||||||||| || |||     ||||| ||||||| |||| |||||| |||||||||||||||||||||||||    
T  34252411 tgcttagcaagccaatccgcacacccgttgccttgacggagggtatgatgaaaattaacaatccaatctcgatgttgcagttggacaatctgactaatca 34252312  T
Q  440 gagaagcatatggatgat 457  Q
    ||| |||||  |||||||    
T  34252311 gaggagcatgaggatgat 34252294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 448
Target Start/End: Original strand, 26292238 - 26292356
Alignment:
Q  335 agaagcattgtgcttagcaagtcaatccgcacactcgttgccttgacagaagg-----tgaaaaataacaattcaatttcgatgatgcagttggacaatc 429  Q
    ||||||||| ||||||||||| ||||||| ||||| ||||||||||| || ||     |||||| ||||||| |||| |||||| |||| ||||| ||||    
T  26292238 agaagcattatgcttagcaagccaatccgtacacttgttgccttgacggagggtctgttgaaaattaacaatccaatatcgatgttgcaattggaaaatc 26292337  T
Q  430 tgactaatcagagaagcat 448  Q
     |||||||||||| |||||    
T  26292338 cgactaatcagaggagcat 26292356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 5467197 - 5467266
Alignment:
Q  167 tgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtcgt 236  Q
    ||||||||||  ||||  |||||||| ||||||||||| ||||||| | ||||| |||||||||||||||    
T  5467197 tgataggtgaatgaagtttccaaaaaggaaagggctaccatcgggtcagtgtcgatagagtgaaagtcgt 5467266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 9e-28; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 345 - 459
Target Start/End: Complemental strand, 5171361 - 5171242
Alignment:
Q  345 tgcttagcaagtcaatccgcacactcgttgccttgacagaaggt-----gaaaaataacaattcaatttcgatgatgcagttggacaatctgactaatca 439  Q
    ||||||||||| ||||||||||||||||||||||||| || |||     ||||| |||||||||||| |||||| |||||||||||||||||||||||||    
T  5171361 tgcttagcaagccaatccgcacactcgttgccttgacggagggtataatgaaaattaacaattcaatctcgatgttgcagttggacaatctgactaatca 5171262  T
Q  440 gagaagcatatggatgatga 459  Q
    ||| |||||  |||||||||    
T  5171261 gaggagcatgaggatgatga 5171242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 66 - 232
Target Start/End: Original strand, 32025044 - 32025210
Alignment:
Q  66 ctctactcatgggtttaaaccttaacaattggtactctcgtagtgagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaaca 165  Q
    |||| |||||||| ||||  | ||||||||||| || || | | |||||||| || ||||| |||||| |||||| |||||||| ||| |||| |||| |    
T  32025044 ctctcctcatgggcttaagtcctaacaattggtgctttcattgagagttggaccacggaaagggctacctataggctggattaaggtgttccaccgaata 32025143  T
Q  166 ttgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaag 232  Q
     ||||||||||| |||||| ||||||| ||||||||||| ||||||| | ||||| |||||||||||    
T  32025144 ctgataggtgagtgaagccgccaaaaaggaaagggctaccatcgggtcagtgtcgatagagtgaaag 32025210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 66 - 232
Target Start/End: Original strand, 32025340 - 32025506
Alignment:
Q  66 ctctactcatgggtttaaaccttaacaattggtactctcgtagtgagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaaca 165  Q
    |||| |||||||| ||||  | ||||||||||| || || | | |||||||| || ||||| |||||| |||||| |||||||| ||| |||| |||| |    
T  32025340 ctctcctcatgggcttaagtcctaacaattggtgctttcattgagagttggaccacggaaagggctacctataggctggattaaggtgttccaccgaata 32025439  T
Q  166 ttgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaag 232  Q
     ||||||||||| |||||| ||||||| ||||||||||| ||||||| | ||||| |||||||||||    
T  32025440 ctgataggtgagtgaagccgccaaaaaggaaagggctaccatcgggtcagtgtcgatagagtgaaag 32025506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 335 - 459
Target Start/End: Complemental strand, 6771129 - 6771000
Alignment:
Q  335 agaagcattgtgcttagcaagtcaatccgcacactcgttgccttgacagaagg-----tgaaaaataacaattcaatttcgatgatgcagttggacaatc 429  Q
    ||||||||  ||||||||||| ||||||||||||||||| ||||||| || ||     ||||||  ||||||||||| |||||| |||||||||||||||    
T  6771129 agaagcatcatgcttagcaagccaatccgcacactcgttaccttgacggagggcatgctgaaaatgaacaattcaatctcgatgttgcagttggacaatc 6771030  T
Q  430 tgactaatcagagaagcatatggatgatga 459  Q
    ||||||||||||| |||||  |||||||||    
T  6771029 tgactaatcagaggagcatgaggatgatga 6771000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 347 - 459
Target Start/End: Complemental strand, 39989414 - 39989296
Alignment:
Q  347 cttagcaagtcaatccgcacactcgttgccttgacagaagg------tgaaaaataacaattcaatttcgatgatgcagttggacaatctgactaatcag 440  Q
    ||||||||| ||||||||||||||||||||||| | || ||      |||||| ||||||| |||| |||||||||||||| |||| ||| ||| |||||    
T  39989414 cttagcaagccaatccgcacactcgttgccttggcggaggggtatgatgaaaattaacaatccaatctcgatgatgcagttagacattctaacttatcag 39989315  T
Q  441 agaagcatatggatgatga 459  Q
    ||||||||| |||||||||    
T  39989314 agaagcataaggatgatga 39989296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 256
Target Start/End: Complemental strand, 13843914 - 13843747
Alignment:
Q  89 aacaattggtactctcgtagtgagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctcca 188  Q
    |||||||||| ||||||| |  ||||||| ||  |||| |||||| |||||  |||||||| ||| |||| |||| | ||||||||||| ||||||  ||    
T  13843914 aacaattggtgctctcgttgaaagttggaccaccgaaagggctacctatagactggattaaggtgttccatcgaatactgataggtgagtgaagccgtca 13843815  T
Q  189 aaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtcgtcgtggatgtcagcttttaaa 256  Q
    |||||||||||||||| ||||||| | ||  | ||||||||||| ||||||||| |||||||||||||    
T  13843814 aaaaagaaagggctaccatcgggtcagtgcagatagagtgaaagccgtcgtggacgtcagcttttaaa 13843747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 345 - 459
Target Start/End: Original strand, 29018572 - 29018693
Alignment:
Q  345 tgcttagcaagtcaatccgcacac--tcgttgccttgacagaagg-----tgaaaaataacaattcaatttcgatgatgcagttggacaatctgactaat 437  Q
    ||||| ||||| ||||||||||||  ||||||||||||| || ||     |||||| | ||||| |||| |||||| || ||||||||||||||||||||    
T  29018572 tgctttgcaagccaatccgcacacactcgttgccttgacggatggaatgttgaaaattgacaatccaatctcgatgttgtagttggacaatctgactaat 29018671  T
Q  438 cagagaagcatatggatgatga 459  Q
    ||||| |||||  |||||||||    
T  29018672 cagaggagcatgaggatgatga 29018693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 2706469 - 2706394
Alignment:
Q  129 gctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggctac 204  Q
    |||||||||||| ||||||||  || |||| |||| |  ||||||||||  ||||| |||||||||||||||||||    
T  2706469 gctacttataggctggattaagatgttccaccgaataccgataggtgagtaaagccgccaaaaaagaaagggctac 2706394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 55428922 - 55428958
Alignment:
Q  345 tgcttagcaagtcaatccgcacactcgttgccttgac 381  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  55428922 tgcttagcaagccaatccgcacactcgttaccttgac 55428958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 459
Target Start/End: Original strand, 55428995 - 55429035
Alignment:
Q  419 gttggacaatctgactaatcagagaagcatatggatgatga 459  Q
    |||||||||||||||||||||||| |||||  |||||||||    
T  55428995 gttggacaatctgactaatcagaggagcatgaggatgatga 55429035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 8e-25; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 110 - 256
Target Start/End: Original strand, 26533416 - 26533562
Alignment:
Q  110 gagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggctactatcg 209  Q
    |||||||| || ||||| |||||| |||||| |||||||| ||| |||| |||| | ||||||||||| |||||| ||||||| ||||||||||| || |    
T  26533416 gagttggaccatggaaagggctacctataggctggattaaggtgttccaccgaatactgataggtgagtgaagccaccaaaaaggaaagggctaccattg 26533515  T
Q  210 ggttaatgtcggtagagtgaaagtcgtcgtggatgtcagcttttaaa 256  Q
    ||| | ||||| ||||||||||| || |||||| ||||||| |||||    
T  26533516 ggtcagtgtcgatagagtgaaagccgccgtggacgtcagctcttaaa 26533562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 293
Target Start/End: Original strand, 44279099 - 44279326
Alignment:
Q  66 ctctactcatgggtttaaaccttaacaattggtactctcgtagtgagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaaca 165  Q
    |||| |||| ||||||||  | ||||||||||| || || | | |||||||| || ||||| || ||| |||| |||| ||||| ||| |||| |||| |    
T  44279099 ctctcctcacgggtttaagtcctaacaattggtgctttcattgagagttggaccacggaaagggttacctatatgttgaattaaggtgttccaccgaata 44279198  T
Q  166 ttgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtcgtcgtggatgtcagcttttaaaagacatgac 265  Q
     || |||||||| ||||||  |||||| ||||||||||  ||||||| | || || |||||||||||||||||| || ||| |||  |||| | | || |    
T  44279199 ctggtaggtgagtgaagccgtcaaaaaggaaagggctatcatcgggtcagtgacgatagagtgaaagtcgtcgtagacgtctgctcctaaagggcgtggc 44279298  T
Q  266 aatgtcagaagtcccgcatcaggtagat 293  Q
    ||||| || |||||| ||||| ||||||    
T  44279299 aatgttaggagtcccacatcaagtagat 44279326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 460
Target Start/End: Original strand, 9388837 - 9388955
Alignment:
Q  347 cttagcaagtcaatccgcacactcgttgccttgacagaaggt-----gaaaaataacaattcaatttcgatgatgcagttggacaatctgactaatcaga 441  Q
    ||||||||| ||||| ||||||||  || ||||||||| |||     ||||| ||||||| |||| |||||| ||||||||||||||||||||||| |||    
T  9388837 cttagcaagccaatctgcacactcaatgtcttgacagagggtatgatgaaaattaacaatccaatctcgatgttgcagttggacaatctgactaataaga 9388936  T
Q  442 gaagcatatggatgatgat 460  Q
    | |||||  ||||||||||    
T  9388937 ggagcatcaggatgatgat 9388955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 457
Target Start/End: Original strand, 9992899 - 9993004
Alignment:
Q  357 caatccgcacactcgttgccttgacagaagg------tgaaaaataacaattcaatttcgatgatgcagttggacaatctgactaatcagagaagcatat 450  Q
    ||||||||||||||||||||||||| |||||      |||||| ||||||| |||| |||| |||||||||||||||| |||||||||| || |||||      
T  9992899 caatccgcacactcgttgccttgac-gaagggtatgatgaaaattaacaatccaatctcgacgatgcagttggacaatttgactaatcaaaggagcatga 9992997  T
Q  451 ggatgat 457  Q
    |||||||    
T  9992998 ggatgat 9993004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 200
Target Start/End: Complemental strand, 27187211 - 27187099
Alignment:
Q  88 taacaattggtactctcgtagtgagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctcc 187  Q
    ||||||||||| || || | | |||||||| || ||||| |||||| |||||| |||||||| ||| |||| |||| | ||||||||||  |||||| ||    
T  27187211 taacaattggtgctttcattgagagttggaccacggaaagggctacctataggctggattaaggtgttccaccgaatactgataggtgattgaagccgcc 27187112  T
Q  188 aaaaaagaaaggg 200  Q
    ||||| |||||||    
T  27187111 aaaaaggaaaggg 27187099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 200
Target Start/End: Complemental strand, 27836753 - 27836641
Alignment:
Q  88 taacaattggtactctcgtagtgagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctcc 187  Q
    ||||||||||| || || | | |||||||| || ||||| |||||| |||||| |||||||| ||| |||| |||| | ||||||||||  |||||| ||    
T  27836753 taacaattggtgctttcattgagagttggaccacggaaagggctacctataggctggattaaggtgttccaccgaatactgataggtgattgaagccgcc 27836654  T
Q  188 aaaaaagaaaggg 200  Q
    ||||| |||||||    
T  27836653 aaaaaggaaaggg 27836641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 200
Target Start/End: Complemental strand, 27837025 - 27836913
Alignment:
Q  88 taacaattggtactctcgtagtgagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctcc 187  Q
    ||||||||||| || || | | |||||||| || ||||| |||||| |||||| |||||||| ||| |||| |||| | ||||||||||  |||||| ||    
T  27837025 taacaattggtgctttcattgagagttggaccacggaaagggctacctataggctggattaaggtgttccaccgaatactgataggtgattgaagccgcc 27836926  T
Q  188 aaaaaagaaaggg 200  Q
    ||||| |||||||    
T  27836925 aaaaaggaaaggg 27836913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 256
Target Start/End: Original strand, 21088918 - 21089063
Alignment:
Q  110 gagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggctactatcg 209  Q
    |||||||| || ||||| |||||| |||||  | |||||| ||| | || |||| | ||||||||||| |||||| ||||||| |||||||||| | |||    
T  21088918 gagttggagcacggaaagggctacctatagtctagattaaggtgtttcaccgaatactgataggtgagtgaagccgccaaaaaggaaagggctattgtcg 21089017  T
Q  210 ggttaatgtcggtagagtgaaagtcgtcgtggatgtcagcttttaaa 256  Q
     | || || || ||||||||||| ||||||||| ||| ||| |||||    
T  21089018 ag-tagtgccgatagagtgaaagccgtcgtggacgtcggctcttaaa 21089063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 58 - 285
Target Start/End: Original strand, 19987731 - 19987956
Alignment:
Q  58 gggttagactctactcatgggtttaaaccttaacaattggtactctcgtagtgagttggatcagggaaatggctacttataggttggattaaagtgctcc 157  Q
    ||||||| |||| |||||||  ||||  | ||||||||||| || || | | |||||||| || ||||| |||||| |||||| |||||||| ||| |||    
T  19987731 gggttaggctctcctcatggacttaagtcctaacaattggtgctttcattgagagttggaccacggaaagggctacctataggctggattaaggtgttcc 19987830  T
Q  158 aacgaacattgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtcgtcgtggatgtcagcttttaaaa 257  Q
    | |||| | ||||||||||| |||||||||||||| ||||||||||| ||| ||| | || ||  | |||||||| ||||||||| ||| ||| |||||     
T  19987831 accgaatactgataggtgagtgaagcctccaaaaaggaaagggctaccatcaggtcagtgccg--atagtgaaagccgtcgtggacgtcggctcttaaag 19987928  T
Q  258 gacatgacaatgtcagaagtcccgcatc 285  Q
    | | || |||||| || |||||| ||||    
T  19987929 ggcgtggcaatgttaggagtcccacatc 19987956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 18936218 - 18936393
Alignment:
Q  66 ctctactcatgggtttaaaccttaacaattggtactctcgtagtgagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaaca 165  Q
    |||| |||||||| ||||  | ||| ||||| | ||||||| | ||||||||||| ||||| |||||| ||||   |||||||| ||||||||  ||| |    
T  18936218 ctctcctcatgggcttaagtcctaagaattgatgctctcgttgagagttggatcacggaaagggctacatatattatggattaaggtgctccattgaata 18936317  T
Q  166 ttgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtcgtcgtgga 242  Q
     ||||||||||| |||||| ||||||| ||||| ||||| || |||| | | | | |||||||||||||||||||||    
T  18936318 ctgataggtgagtgaagccgccaaaaaggaaagagctaccattgggtcagt-ttgatagagtgaaagtcgtcgtgga 18936393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 258
Target Start/End: Original strand, 18930666 - 18930773
Alignment:
Q  151 gtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtcgtcgtggatgtcagct 250  Q
    |||||||| |||| | ||||||||||| |||||| ||||||| ||||||||||| ||  ||| | || || |||||| |||||||||||||| ||| |||    
T  18930666 gtgctccaccgaatactgataggtgagtgaagccgccaaaaaggaaagggctaccattaggtcagtgccgatagagtaaaagtcgtcgtggacgtcggct 18930765  T
Q  251 tttaaaag 258  Q
     |||||||    
T  18930766 cttaaaag 18930773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 459
Target Start/End: Original strand, 19816306 - 19816425
Alignment:
Q  345 tgcttagcaagtcaatccgcacactcgttgccttgacagaaggt-----gaaaaataacaattcaatttcgatgatgcagttggacaatctgactaatca 439  Q
    ||||||||||| ||||||||||||||||| ||||||| ||  ||     |||||  |||||| |||| | |||| |||||||||||||||||||||||||    
T  19816306 tgcttagcaagccaatccgcacactcgttaccttgacggagagtatgatgaaaatgaacaatccaatcttgatgttgcagttggacaatctgactaatca 19816405  T
Q  440 gagaagcatatggatgatga 459  Q
    | | |||||  |||||||||    
T  19816406 ggggagcatgaggatgatga 19816425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 345 - 441
Target Start/End: Complemental strand, 1804635 - 1804532
Alignment:
Q  345 tgcttagcaagtcaatccgcacactcgttgccttgacag-------aaggtgaaaaataacaattcaatttcgatgatgcagttggacaatctgactaat 437  Q
    ||||||||||||||||| ||||||||||| ||||||| |       | | |||||| ||||||| |||| |||||| ||||| |||||||||| ||||||    
T  1804635 tgcttagcaagtcaatctgcacactcgttaccttgacggaggctgtatgatgaaaattaacaatccaatatcgatgttgcaggtggacaatctaactaat 1804536  T
Q  438 caga 441  Q
    ||||    
T  1804535 caga 1804532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 380
Target Start/End: Complemental strand, 21375135 - 21375100
Alignment:
Q  345 tgcttagcaagtcaatccgcacactcgttgccttga 380  Q
    ||||||||||| ||||||||||||||||||||||||    
T  21375135 tgcttagcaagccaatccgcacactcgttgccttga 21375100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 41206486 - 41206515
Alignment:
Q  9 tagataaaagtgtttgatgtggtatttaag 38  Q
    ||||||||||||||||||||||||||||||    
T  41206486 tagataaaagtgtttgatgtggtatttaag 41206515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 110 - 232
Target Start/End: Original strand, 261962 - 262084
Alignment:
Q  110 gagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggctactatcg 209  Q
    |||||||| || ||||| |||||| |||||| |||||||| ||| |||| |||| | ||||||||||| |||||| ||||||| ||||||||||| |||     
T  261962 gagttggaccacggaaagggctacctataggctggattaaggtgttccaccgaatactgataggtgagtgaagccgccaaaaaggaaagggctaccatca 262061  T
Q  210 ggttaatgtcggtagagtgaaag 232  Q
    ||| | ||||| |||||||||||    
T  262062 ggtcagtgtcgatagagtgaaag 262084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 335 - 448
Target Start/End: Original strand, 8567559 - 8567677
Alignment:
Q  335 agaagcattgtgcttagcaagtcaatccgcacactcgttgccttgacagaagg-----tgaaaaataacaattcaatttcgatgatgcagttggacaatc 429  Q
    |||||||| || ||||||||||||||| |||||||||||||||| ||||| ||     |||||| ||| |||||||| |||||| | |||||||||||||    
T  8567559 agaagcatcgtacttagcaagtcaatctgcacactcgttgccttaacagagggtatgatgaaaattaataattcaatctcgatgttacagttggacaatc 8567658  T
Q  430 tgactaatcagagaagcat 448  Q
    |||||||||| || |||||    
T  8567659 tgactaatcaaaggagcat 8567677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 459
Target Start/End: Original strand, 15917207 - 15917336
Alignment:
Q  335 agaagcattgtgcttagcaagtcaatccgcacactcgttgccttgacagaaggt-----gaaaaataacaattcaatttcgatgatgcagttggacaatc 429  Q
    ||||||||  ||||||||||| |||||||||||| |||| ||||||| || |||     ||||| ||||||| |||| |||||| |||||||||||||||    
T  15917207 agaagcatcatgcttagcaagccaatccgcacacgcgttaccttgacggagggtatgatgaaaattaacaatgcaatctcgatgttgcagttggacaatc 15917306  T
Q  430 tgactaatcagagaagcatatggatgatga 459  Q
    |||||||| |||| |||||  |||||||||    
T  15917307 tgactaattagaggagcatggggatgatga 15917336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 256
Target Start/End: Complemental strand, 34373849 - 34373729
Alignment:
Q  137 taggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaa-gaaagggctactatcgggttaatgtcggtagagtgaaagtcg 235  Q
    |||| |||||||| ||| |||| |||| | ||||||||||| |||||| |||||||| ||||||||| | |||| |||| || || |||||||||||| |    
T  34373849 taggctggattaaggtgttccatcgaatactgataggtgagtgaagccaccaaaaaaggaaagggctgccatcgagttattgccgatagagtgaaagttg 34373750  T
Q  236 tcgtggatgtcagcttttaaa 256  Q
    ||||||| ||| ||| |||||    
T  34373749 tcgtggacgtcggctcttaaa 34373729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 15938086 - 15937966
Alignment:
Q  112 gttggatcagggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagagaagcctccaaaaaagaaagggctactatcggg 211  Q
    |||||| || ||||| |||||| |||||  |||||||| ||||||||  ||| | ||||||||||| |||||| |||| | | |||||||||| ||||||    
T  15938086 gttggaccaaggaaagggctacctatagactggattaaggtgctccactgaatactgataggtgagtgaagccaccaatagaaaaagggctaccatcggg 15937987  T
Q  212 ttaatgtcggtagagtgaaag 232  Q
    ||| || || |||| ||||||    
T  15937986 ttagtgccgatagaatgaaag 15937966  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 21397136 - 21397223
Alignment:
Q  167 tgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtcgtcgtggatgtcagctttta 254  Q
    ||||||||||| | ||||  |||| | ||||||||||| ||||||| | || || ||||||||||||||||||||||||  |||||||    
T  21397136 tgataggtgagtgcagccgtcaaagaggaaagggctaccatcgggtcagtgccgatagagtgaaagtcgtcgtggatgttggctttta 21397223  T

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Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 21791629 - 21791716
Alignment:
Q  167 tgataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtcgtcgtggatgtcagctttta 254  Q
    ||||||||||| | ||||  |||| | ||||||||||| ||||||| | || || ||||||||||||||||||||||||  |||||||    
T  21791629 tgataggtgagtgcagccgtcaaagaggaaagggctaccatcgggtcagtgccgatagagtgaaagtcgtcgtggatgttggctttta 21791716  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 21008446 - 21008318
Alignment:
Q  66 ctctactcatgggtttaaaccttaacaattggtactctcgtagtgagttggatcagggaaatggctacttataggttggattaaagtgctccaacgaaca 165  Q
    |||| |||||||||||||  | ||| ||||||| ||||||| |  | ||||| || ||||| |||||| |||||| |||||||| ||| |||| | || |    
T  21008446 ctctcctcatgggtttaagtcctaataattggtgctctcgttgaaatttggaccacggaaagggctacctataggctggattaaggtgttccaccaaata 21008347  T
Q  166 t--tgataggtgagagaagcctccaaaaa 192  Q
    |  ||||||||||| |||||| |||||||    
T  21008346 tactgataggtgagtgaagccgccaaaaa 21008318  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 24196082 - 24195970
Alignment:
Q  122 ggaaatggctacttataggttggattaaagtgctccaacgaacattgataggtgagag--aagcctccaaaaaagaaagggctactatcgggttaatgtc 219  Q
    ||||| |||||| |||||| || ||||| |||||| | |||| | ||||||| |||||  || || ||||||| ||||||||||| ||||| | ||||||    
T  24196082 ggaaagggctacctataggctgaattaaggtgctctatcgaatactgataggagagagtgaaaccaccaaaaaggaaagggctaccatcggatcaatgtc 24195983  T
Q  220 ggtagagtgaaag 232  Q
    | || ||||||||    
T  24195982 gataaagtgaaag 24195970  T

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Target: scaffold1212 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1212
Description:

Target: scaffold1212; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 1968 - 2055
Alignment:
Q  169 ataggtgagagaagcctccaaaaaagaaagggctactatcgggttaatgtcggtagagtgaaagtcgtcgtggatgtcagcttttaaa 256  Q
    ||||||||| |||||| ||||||| ||||| ||||| ||||||| | |||||||||||| ||||||| |||||| ||| ||| |||||    
T  1968 ataggtgagtgaagccgccaaaaaggaaagagctaccatcgggtcagtgtcggtagagtaaaagtcgccgtggacgtcggctcttaaa 2055  T

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