View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4403-Insertion-4 (Length: 621)

Name: NF4403-Insertion-4
Description: NF4403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4403-Insertion-4
NF4403-Insertion-4
[»] chr1 (16 HSPs)
chr1 (7-549)||(48653348-48653893)
chr1 (11-378)||(48617736-48618103)
chr1 (11-342)||(11547463-11547794)
chr1 (142-363)||(48661897-48662118)
chr1 (544-610)||(48654679-48654745)
chr1 (11-72)||(48661784-48661845)
chr1 (243-347)||(48667587-48667691)
chr1 (227-375)||(48629286-48629434)
chr1 (142-345)||(48585690-48585893)
chr1 (11-68)||(48585559-48585616)
chr1 (142-345)||(48640263-48640466)
chr1 (19-68)||(48667387-48667436)
chr1 (13-68)||(48629100-48629155)
chr1 (11-73)||(48640132-48640194)
chr1 (23-291)||(48656812-48657080)
chr1 (132-192)||(48629203-48629263)
[»] chr3 (1 HSPs)
chr3 (23-363)||(19665107-19665447)
[»] chr8 (2 HSPs)
chr8 (121-333)||(27224312-27224524)
chr8 (42-363)||(27228436-27228757)


Alignment Details
Target: chr1 (Bit Score: 482; Significance: 0; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 7 - 549
Target Start/End: Original strand, 48653348 - 48653893
Alignment:
Q  7 attatttatgagacatgaaattggtttgtttgactcagcatgattcttgatcatttgagaaacaaagggttttccaacaagtttgagctgtgctatgtag 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48653348 attatttatgagacatgaaattggtttgtttgactcagcatgattcttgatcatttgagaaacaaagggttttccaacaagtttgagctgtgctatgtag 48653447  T
Q  107 ccagtaatatctcctctaataggatcatcatcttctaaacaatcatcaaagaactcaaaagtgagtgaaccatcaccaattggagtgaatgatttttcaa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48653448 ccagtaatatctcctctaataggatcatcatcttctaaacaatcatcaaagaactcaaaagtgagtgaaccatcaccaattggagtgaatgatttttcaa 48653547  T
Q  207 tgatgttgttaacagttcttatgtcttttccagctctttctgttgtcatgaaaatgacagaagcaccctttgcagcaacacactttgctagactaagcaa 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48653548 tgatgttgttaacagttcttatgtcttttccagctctttctgttgtgatgaaaatgacagaagcaccctttgcagcaacacactttgctagactaagcaa 48653647  T
Q  307 aggattaatgtgtccttgtgctggataagaaataaggaggacatgaatgggagcttccgatctcattttcttcgatgannnnnnncagtcagagataata 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  48653648 aggattaatgtgtccttgtgctggataagaaataaggaggacatgaatgggagcttccgatctcattttcttcgatgatttttttcagtcagagataata 48653747  T
Q  407 gatttttataatggtagcagtgggatacactttactaattttatgaacatgatagaaataataactatttcgtgtctctcgttagaataaaatataa--- 503  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       
T  48653748 gatttttataatggtagcagtgggatacactttactaattttatgaacatgatagaaataataattatttcgtgtctctcgttagaataaaatataatac 48653847  T
Q  504 tagnnnnnnnagtagtagttagaacgtagaaggggaatatataatt 549  Q
    |||       ||||||||||||||||||||||||||||||||||||    
T  48653848 tagttttttgagtagtagttagaacgtagaaggggaatatataatt 48653893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 378
Target Start/End: Complemental strand, 48618103 - 48617736
Alignment:
Q  11 tttatgagacatgaaattggtttgtttgactcagcatgattcttgatcatttgagaaacaaagggttttccaacaagtttgagctgtgctatgtagccag 110  Q
    ||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||      
T  48618103 tttatgatacatgaaaatggtttgtttgaatcagcatgattcttgatcatttgagaaacaaagggttttccaacaagtttgagatgttctatgtagccta 48618004  T
Q  111 taatatctcctctaataggatcatcatcttctaaacaatcatcaaagaactcaaaagtgagtgaaccatcaccaattggagtgaatgatttttcaatgat 210  Q
     || || |||||||| ||||| |||||||||||||| |||||| |||||||||||||| || |||||||||||||||| ||||| |||||||||||||||    
T  48618003 aaagatttcctctaagaggatgatcatcttctaaaccatcatctaagaactcaaaagtaagagaaccatcaccaattgaagtgagtgatttttcaatgat 48617904  T
Q  211 gttgttaacagttcttatgtcttttccagctctttctgttgtcatgaaaatgacagaagcaccctttgcagcaacacactttgctagactaagcaaagga 310  Q
     ||||||||||||||||||||||| |||||| | |||||||| ||||| ||||||||||||||||||||||||| |||||||||||| ||||| | |||     
T  48617903 attgttaacagttcttatgtctttgccagctttctctgttgtgatgaagatgacagaagcaccctttgcagcaagacactttgctagtctaagaagaggg 48617804  T
Q  311 ttaatgtgtccttgtgctggataagaaataaggaggacatgaatgggagcttccgatctcattttctt 378  Q
    || ||||||||||||||||||||||| ||||| |||| |||| ||   ||||| |||| |||||||||    
T  48617803 tttatgtgtccttgtgctggataagagataagaaggatatgagtgtttgcttcggatcccattttctt 48617736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 11 - 342
Target Start/End: Original strand, 11547463 - 11547794
Alignment:
Q  11 tttatgagacatgaaattggtttgtttgactcagcatgattcttgatcatttgagaaacaaagggttttccaacaagtttgagctgtgctatgtagccag 110  Q
    ||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||| | ||| ||||| |||| |||||| || ||| |||||||||||     
T  11547463 tttatgatacaagaaattggtttgtttgactcaacatgattcttgatcatttgagacaaaaaaggtttcccaaaaagttttagttgttctatgtagccac 11547562  T
Q  111 taatatctcctctaataggatcatcatcttctaaacaatcatcaaagaactcaaaagtgagtgaaccatcaccaattggagtgaatgatttttcaatgat 210  Q
     || || | | ||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| ||| ||||  |||| ||||||||||| |||    
T  11547563 aaagatttgccctaataggatcatcatcttgtaaaccatcatcaaagaactcaaaagtgagagaaccattacctattgatgtgactgatttttcaacgat 11547662  T
Q  211 gttgttaacagttcttatgtcttttccagctctttctgttgtcatgaaaatgacagaagcaccctttgcagcaacacactttgctagactaagcaaagga 310  Q
    ||||||||| |||  ||||||||| |||||| | | |||||| ||||| ||||||||||||||||||||||||| |||||||||||  ||||| | |||     
T  11547663 gttgttaaccgtttgtatgtctttgccagctttctttgttgtgatgaagatgacagaagcaccctttgcagcaagacactttgctaatctaagaagaggg 11547762  T
Q  311 ttaatgtgtccttgtgctggataagaaataag 342  Q
    || |||||||||||| ||||| |||| |||||    
T  11547763 tttatgtgtccttgtcctggaaaagagataag 11547794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 142 - 363
Target Start/End: Original strand, 48661897 - 48662118
Alignment:
Q  142 taaacaatcatcaaagaactcaaaagtgagtgaaccatcaccaattggagtgaatgatttttcaatgatgttgttaacagttcttatgtcttttccagct 241  Q
    ||||| || |||||||||||| ||| |||| ||||||||||| || |||||   | |||| |   |||||| || |||| |||  |||||||| ||||||    
T  48661897 taaactatgatcaaagaactcgaaaatgagagaaccatcacctatcggagttgctaatttgttggtgatgtcgtcaacaattcccatgtctttgccagct 48661996  T
Q  242 ctttctgttgtcatgaaaatgacagaagcaccctttgcagcaacacactttgctagactaagcaaaggattaatgtgtccttgtgctggataagaaataa 341  Q
     | ||||||||  ||||||||||||| ||||| |||||||||| ||||||| |||| ||||| | ||| || |||||||||||||||||| |||||| ||    
T  48661997 ttctctgttgtggtgaaaatgacagaggcaccttttgcagcaagacactttcctagtctaagaagagggtttatgtgtccttgtgctggaaaagaaacaa 48662096  T
Q  342 ggaggacatgaatgggagcttc 363  Q
    |||||| |||||||||||||||    
T  48662097 ggaggatatgaatgggagcttc 48662118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 544 - 610
Target Start/End: Original strand, 48654679 - 48654745
Alignment:
Q  544 ataatttactactgctttttatgaatggtgatatagatagtaatcatctcgtttctctcattagaat 610  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48654679 ataatttactactgctttttatgaatggtgatatagatagtaatcatctcgtttctctcattagaat 48654745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 48661784 - 48661845
Alignment:
Q  11 tttatgagacatgaaattggtttgtttgactcagcatgattcttgatcatttgagaaacaaa 72  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  48661784 tttatgacacatgaaattggtttgtttgaatcagcatgattcttgatcatttgagaaacaaa 48661845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 48667587 - 48667691
Alignment:
Q  243 tttctgttgtcatgaaaatgacagaagcaccctttgcagcaacacactttgctagactaagcaaaggattaatgtgtccttgtgctggataagaaataag 342  Q
    |||||||||| ||||| ||||||||||||||||||||||||| ||| ||  |||| ||||| | ||| || |||||||||||||||||| |||||| |||    
T  48667587 tttctgttgtgatgaagatgacagaagcaccctttgcagcaagacatttacctagtctaagaagagggtttatgtgtccttgtgctggaaaagaaacaag 48667686  T
Q  343 gagga 347  Q
    |||||    
T  48667687 gagga 48667691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 227 - 375
Target Start/End: Original strand, 48629286 - 48629434
Alignment:
Q  227 atgtcttttccagctctttctgttgtcatgaaaatgacagaagcaccctttgcagcaacacactttgctagactaagcaaaggattaatgtgtccttgtg 326  Q
    |||||||| || ||| | ||||||||  | || |||||||| |||||||||||||||| ||| ||| |||| ||||| | ||| || |||||||||||||    
T  48629286 atgtctttgcctgctttctctgttgtagtaaagatgacagaggcaccctttgcagcaagacattttcctagtctaagaagagggtttatgtgtccttgtg 48629385  T
Q  327 ctggataagaaataaggaggacatgaatgggagcttccgatctcatttt 375  Q
    ||||| |||||| ||| |||| ||||| |||| |||| |||| ||||||    
T  48629386 ctggaaaagaaacaagtaggatatgaaggggaacttcggatcccatttt 48629434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 345
Target Start/End: Original strand, 48585690 - 48585893
Alignment:
Q  142 taaacaatcatcaaagaactcaaaagtgagtgaaccatcaccaattggagtgaatgatttttcaatgatgttgttaacagttcttatgtcttttccagct 241  Q
    ||||| ||||||||||||||| |||| ||  | ||||||||||||||||||   | |||| ||||||||||||||| ||| ||  |||| ||| |||||     
T  48585690 taaaccatcatcaaagaactcgaaagcgaaagtaccatcaccaattggagttgctaatttgtcaatgatgttgttagcagctcgcatgtttttgccagcc 48585789  T
Q  242 ctttctgttgtcatgaaaatgacagaagcaccctttgcagcaacacactttgctagactaagcaaaggattaatgtgtccttgtgctggataagaaataa 341  Q
     | ||||||||  |||| || ||||  |||||||||||||||| | ||||| |||| | ||  | | | || |||||||||||||||||| |||| | ||    
T  48585790 gtctctgttgtggtgaagataacagtggcaccctttgcagcaagatactttcctagtccaacaagatggtttatgtgtccttgtgctggaaaagagacaa 48585889  T
Q  342 ggag 345  Q
    ||||    
T  48585890 ggag 48585893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 48585559 - 48585616
Alignment:
Q  11 tttatgagacatgaaattggtttgtttgactcagcatgattcttgatcatttgagaaa 68  Q
    ||||||| |||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  48585559 tttatgatacatgaaaatggtttgtttaaatcagcatgattcttgatcatttgagaaa 48585616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 345
Target Start/End: Original strand, 48640263 - 48640466
Alignment:
Q  142 taaacaatcatcaaagaactcaaaagtgagtgaaccatcaccaattggagtgaatgatttttcaatgatgttgttaacagttcttatgtcttttccagct 241  Q
    ||||| ||| ||||||||||| |||| ||  | ||||||||||||||||||   | |||| ||||||||||||||| ||| ||  |||| ||| |||||     
T  48640263 taaaccatcgtcaaagaactcgaaagcgaaagtaccatcaccaattggagttgctaatttgtcaatgatgttgttagcagctcgcatgtttttgccagcc 48640362  T
Q  242 ctttctgttgtcatgaaaatgacagaagcaccctttgcagcaacacactttgctagactaagcaaaggattaatgtgtccttgtgctggataagaaataa 341  Q
     | ||||||||  |||| || ||||  |||||||||||||||| | ||||| |||| | ||  | | | || |||||||||||||||||| |||| | ||    
T  48640363 gtctctgttgtggtgaagataacagtggcaccctttgcagcaagatactttcctagtccaacaagatggtttatgtgtccttgtgctggaaaagagacaa 48640462  T
Q  342 ggag 345  Q
    ||||    
T  48640463 ggag 48640466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 48667387 - 48667436
Alignment:
Q  19 acatgaaattggtttgtttgactcagcatgattcttgatcatttgagaaa 68  Q
    |||||||||||||||||| || |||||||||||||| |||||||||||||    
T  48667387 acatgaaattggtttgttcgaatcagcatgattctttatcatttgagaaa 48667436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 48629100 - 48629155
Alignment:
Q  13 tatgagacatgaaattggtttgtttgactcagcatgattcttgatcatttgagaaa 68  Q
    ||||| |||||||||||||||  |||| |||||||||||||||||||||| |||||    
T  48629100 tatgatacatgaaattggtttacttgaatcagcatgattcttgatcattttagaaa 48629155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 48640132 - 48640194
Alignment:
Q  11 tttatgagacatgaaattggtttgtttgactcagcatgattcttgatcatttgagaaacaaag 73  Q
    ||||||| |||||||| |||||||||||| || ||||||||||| |||||||| |||| ||||    
T  48640132 tttatgatacatgaaaatggtttgtttgaatcggcatgattctttatcatttgtgaaataaag 48640194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 291
Target Start/End: Original strand, 48656812 - 48657080
Alignment:
Q  23 gaaattggtttgtttgactcagcatgattcttgatcatttgagaaacaaagggttttccaacaagtttgagctgtgctatgtagccagtaatatctcctc 122  Q
    ||||||||| | ||||||||||||||||| ||||||| ||| |||||| |  |||| || ||| | |  ||||||| | ||||| ||  || |  |  ||    
T  48656812 gaaattggtgtttttgactcagcatgatttttgatcaattgggaaacatatagtttcccgacatgctcaagctgtgatgtgtagtcaccaagacttgttc 48656911  T
Q  123 taataggatcatcatcttctaaacaatcatcaaagaactcaaaagtgagtgaaccatcaccaattggagtgaatgatttttcaatgatgttgttaacagt 222  Q
    | || |||||||| ||||  |||| ||| ||||| || |||||||||||  |||| | ||| |||||||||  || ||| | | | ||||||||| ||||    
T  48656912 tcatgggatcatcgtctttcaaaccatcgtcaaataaatcaaaagtgaggaaacccttaccgattggagtggttgttttgttagttatgttgttagcagt 48657011  T
Q  223 tcttatgtcttttccagctctttctgttgtcatgaaaatgacagaagcaccctttgcagcaacacactt 291  Q
    |   |||||||| |||||| | |  |||||  |||| |||||||||| |||||||||||||| ||||||    
T  48657012 ttccatgtctttgccagctttctgcgttgtggtgaagatgacagaagaaccctttgcagcaagacactt 48657080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 48629203 - 48629263
Alignment:
Q  132 catcatcttctaaacaatcatcaaagaactcaaaagtgagtgaaccatcaccaattggagt 192  Q
    ||||||||  |||||||| |||||||||||| ||||||||  ||||||| || ||||||||    
T  48629203 catcatctagtaaacaatgatcaaagaactcgaaagtgaggcaaccatcgcctattggagt 48629263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 7e-57; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 19665447 - 19665107
Alignment:
Q  23 gaaattggtttgtttgactcagcatgattcttgatcatttgagaaacaaagggttttccaacaagtttgagctgtgctatgtagccagtaatatctcctc 122  Q
    ||||| |||||||||||||||  ||||||||| ||||||||||||| |||   | | |||||||| |  ||||||| |  ||| |||  || |  | |||    
T  19665447 gaaataggtttgtttgactcattatgattcttaatcatttgagaaagaaactttgtcccaacaagctcaagctgtgttgagtatccaccaagacttgctc 19665348  T
Q  123 taataggatcatcatcttctaaacaatcatcaaagaactcaaaagtgagtgaaccatcaccaattggagtgaatgatttttcaatgatgttgttaacagt 222  Q
    |||| ||||||||||||||||||| |||||||||||| |  ||| |||| ||||||||||| |||||||||| |||||| | | ||||||||||||||||    
T  19665347 taatgggatcatcatcttctaaaccatcatcaaagaagtggaaaatgagagaaccatcacctattggagtgagtgatttgtgagtgatgttgttaacagt 19665248  T
Q  223 tcttatgtcttttccagctctttctgttgtcatgaaaatgacagaagcaccctttgcagcaacacactttgctagactaagcaaaggattaatgtgtcct 322  Q
    |   |||||||| |||||| | ||||| || ||||| ||||| |||| |||||||||||||| |||||||||||| ||||| | ||| || |||||||||    
T  19665247 ttgcatgtctttgccagctttctctgtagtgatgaagatgactgaagaaccctttgcagcaagacactttgctagtctaagaagagggtttatgtgtcct 19665148  T
Q  323 tgtgctggataagaaataaggaggacatgaatgggagcttc 363  Q
    ||||||||||| || ||||||||||  |||||||| |||||    
T  19665147 tgtgctggatatgagataaggaggatgtgaatgggtgcttc 19665107  T

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Target: chr8 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 121 - 333
Target Start/End: Original strand, 27224312 - 27224524
Alignment:
Q  121 tctaataggatcatcatcttctaaacaatcatcaaagaactcaaaagtgagtgaaccatcaccaattggagtgaatgatttttcaatgatgttgttaaca 220  Q
    |||||| ||||||||||||  |||||  ||||||||||||| ||| ||||| ||||||| ||||| |||| ||| | |||||||| |||| |||||||||    
T  27224312 tctaatgggatcatcatctgataaaccgtcatcaaagaactgaaatgtgagagaaccattaccaactggaatgactaatttttcagtgatattgttaaca 27224411  T
Q  221 gttcttatgtcttttccagctctttctgttgtcatgaaaatgacagaagcaccctttgcagcaacacactttgctagactaagcaaaggattaatgtgtc 320  Q
    ||||| |  ||||| |||||| | |||||||| ||||| || ||||||| ||||||||  |||| ||||||| |||| ||||||| |||||| |||||||    
T  27224412 gttctcaattctttgccagctttctctgttgtgatgaagataacagaagaaccctttgatgcaagacactttcctagtctaagcataggatttatgtgtc 27224511  T
Q  321 cttgtgctggata 333  Q
    |||||||||||||    
T  27224512 cttgtgctggata 27224524  T

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Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 42 - 363
Target Start/End: Original strand, 27228436 - 27228757
Alignment:
Q  42 cagcatgattcttgatcatttgagaaacaaagggttttccaacaagtttgagctgtgctatgtagccagtaatatctcctctaataggatcatcatcttc 141  Q
    ||||||||||||||||||||||||||| |||   ||| ||||| || | ||| |||| || ||||  |||||    | ||||||| ||||||||||||      
T  27228436 cagcatgattcttgatcatttgagaaagaaactttttcccaacgagctcgaggtgtggtaagtaggtagtaaggcttgctctaatgggatcatcatctga 27228535  T
Q  142 taaacaatcatcaaagaactcaaaagtgagtgaaccatcaccaattggagtgaatgatttttcaatgatgttgttaacagttcttatgtcttttccagct 241  Q
    |||||  || ||||||||||| || | ||| ||||||| ||||| |||| ||| |||||| ||||||||||||||||||||||| |  ||| | ||||||    
T  27228536 taaaccgtcttcaaagaactcgaatgcgagagaaccattaccaactggaatgactgatttatcaatgatgttgttaacagttctcaactctctgccagct 27228635  T
Q  242 ctttctgttgtcatgaaaatgacagaagcaccctttgcagcaacacactttgctagactaagcaaaggattaatgtgtccttgtgctggataagaaataa 341  Q
     | || ||||| ||||| || ||||||| ||||||||  |||| ||||||| |||  ||||||| |||||| |||||||||||||||||||| || | ||    
T  27228636 ttctcagttgtgatgaagataacagaagaaccctttgatgcaagacactttcctaatctaagcataggatttatgtgtccttgtgctggatatgatacaa 27228735  T
Q  342 ggaggacatgaatgggagcttc 363  Q
    |||| | ||  |||||||||||    
T  27228736 ggagaatattgatgggagcttc 27228757  T

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