View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4403_low_6 (Length: 440)
Name: NF4403_low_6
Description: NF4403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4403_low_6 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 43586629 - 43586385
Alignment:
| Q |
1 |
tttgttgaacctctcttaagaagtagagcttgatgttgaaatgtttagtcttcccatgacatactggatcctttgaaattgcaattgctgcctgactgtc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43586629 |
tttgttgaacctctcttaagaagtagagcttgatgttgaaatgtttagtcttcccatgacatactggatcctttgaaattgcaattgctgcctgactgtc |
43586530 |
T |
|
| Q |
101 |
gacaaagatttttgtcttatcattctgctagatatctaaatcacataaaaccttttttaaccataaaacttgatttgcagcagctgttgctgctatgaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43586529 |
gacaaagatttttgtcttatcattctgttggatatctaaatcacataaaaccttttttaaccataaaacttgatttgcagcagctgttgctgctatgaat |
43586430 |
T |
|
| Q |
201 |
tcagcttctgcagtggattgtgctacaatctcttgcttctttgtg |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43586429 |
tcagcttctgcagtggattgtgctacaatctcttgcttctttgtg |
43586385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 35966150 - 35966394
Alignment:
| Q |
1 |
tttgttgaacctctcttaagaagtagagcttgatgttgaaatgtttagtcttcccatgacatactggatcctttgaaattgcaattgctgcctgactgtc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35966150 |
tttgttgaacctctcttaagaagtagagcttaatgttgaaatgtttagtcttcccatgacatactggatcctttgaaattgcaattgctgcctgactgtc |
35966249 |
T |
|
| Q |
101 |
gacaaagatttttgtcttatcattctgctagatatctaaatcacataaaaccttttttaaccataaaacttgatttgcagcagctgttgctgctatgaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35966250 |
gacaaagatttttgtcttatcattctgttggatatctaaatcacataaaaccttttttaaccataaaacttgatttgcagcagctgttgctgctatgaat |
35966349 |
T |
|
| Q |
201 |
tcagcttctgcagtggattgtgctacaatctcttgcttctttgtg |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35966350 |
tcagcttctgcagtggattgtgctacaatctcttgcttctttgtg |
35966394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 35987627 - 35987806
Alignment:
| Q |
66 |
ggatcctttgaaattgcaattgctgcctgactgtcgacaaagatttttgtcttatcattctgctagatatctaaatcacataaaaccttttttaaccata |
165 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
35987627 |
ggatcctttgaaattgcaattgctgcctgactgtcgacaaagatttttgtcttatcattctgttggatatctaaatcacataaaaccttttttaaccata |
35987726 |
T |
|
| Q |
166 |
aaacttgatttgcagcagctgttgctgctatgaattcagcttctgcagtggattgtgctacaatctcttgcttctttgtg |
245 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35987727 |
aaacttgatttgcagcagctgttgctgctatgaattcagcttctgcagtggattgtgctacaatctcttgcttctttgtg |
35987806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 245 - 425
Target Start/End: Original strand, 35966539 - 35966719
Alignment:
| Q |
245 |
gtacctttaatataccttagtattctttttgctgctatcaaatgcatttcactagcacaatgcataaaccgagagagaagacttatagcaaatagaatat |
344 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
35966539 |
gtacctttaatatacctcagtattctttttgctgctatcaaatgcatttcactagcacaatgcataaaccgagagagaagacttacagcaaatagaatat |
35966638 |
T |
|
| Q |
345 |
ctggccttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttcgtcaattttatcagcatcatctt |
425 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
35966639 |
ctggccttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttcgtcaattttatcagcaccatctt |
35966719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 245 - 425
Target Start/End: Original strand, 35987951 - 35988131
Alignment:
| Q |
245 |
gtacctttaatataccttagtattctttttgctgctatcaaatgcatttcactagcacaatgcataaaccgagagagaagacttatagcaaatagaatat |
344 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
35987951 |
gtacctttaatatacctcagtattctttttgctgctatcaaatgcatttcactagcacaatgcataaaccgagagagaagacttacagcaaatagaatat |
35988050 |
T |
|
| Q |
345 |
ctggccttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttcgtcaattttatcagcatcatctt |
425 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
35988051 |
ctggccttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttcgtcaattttatcagcaccatctt |
35988131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 245 - 425
Target Start/End: Complemental strand, 43586240 - 43586060
Alignment:
| Q |
245 |
gtacctttaatataccttagtattctttttgctgctatcaaatgcatttcactagcacaatgcataaaccgagagagaagacttatagcaaatagaatat |
344 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
43586240 |
gtacctttaatatacctcagtattctttttgctgctatcaaatgcatttcactagcacaatgcataaaccgagagagaagacttacagcaaatagaatat |
43586141 |
T |
|
| Q |
345 |
ctggccttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttcgtcaattttatcagcatcatctt |
425 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
43586140 |
ctggccttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttcgtcaattttatcagcaccatctt |
43586060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 303 - 425
Target Start/End: Complemental strand, 8989297 - 8989175
Alignment:
| Q |
303 |
aatgcataaaccgagagagaagacttatagcaaatagaatatctggccttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttc |
402 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8989297 |
aatgcataaaccgagagagaagacttacagcaaatagaatatctggccttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttc |
8989198 |
T |
|
| Q |
403 |
gtcaattttatcagcatcatctt |
425 |
Q |
| |
|
|||||||||||||||| |||||| |
|
|
| T |
8989197 |
gtcaattttatcagcaccatctt |
8989175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 35927042 - 35927090
Alignment:
| Q |
195 |
atgaattcagcttctgcagtggattgtgctacaatctcttgcttctttg |
243 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||| ||||| ||||||| |
|
|
| T |
35927042 |
atgaattctgcttctgcagttgactgtgctacaatatcttgtttctttg |
35927090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 43445317 - 43445073
Alignment:
| Q |
1 |
tttgttgaacctctcttaagaagtagagcttgatgttgaaatgtttagtcttcccatgacatactggatcctttgaaattgcaattgctgcctgactgtc |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
43445317 |
tttgttgaacctctcttaagaagtagaacttaatgttgaaatgtttagtcttcccatgacatactggatcctttgaaattgcaattgatgcctgactgtc |
43445218 |
T |
|
| Q |
101 |
gacaaagatttttgtcttatcattctgctagatatctaaatcacataaaaccttttttaaccataaaacttgatttgcagcagctgttgctgctatgaat |
200 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43445217 |
gacaaagatttttgtcttatcattctgatggatatctaaatcacataaaaccttttttaaccataaaacttgatttgcagcagctgttgctgctatgaat |
43445118 |
T |
|
| Q |
201 |
tcagcttctgcagtggattgtgctacaatctcttgcttctttgtg |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43445117 |
tcagcttctgcagtggattgtgctacaatctcttgcttctttgtg |
43445073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 245 - 425
Target Start/End: Complemental strand, 43444928 - 43444748
Alignment:
| Q |
245 |
gtacctttaatataccttagtattctttttgctgctatcaaatgcatttcactagcacaatgcataaaccgagagagaagacttatagcaaatagaatat |
344 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| |
|
|
| T |
43444928 |
gtacctttaatatacctcagtattctttttgctgctatcaaatgcatttcactagcacaatgcataaatcgagagagaagacttacatcaaatagaatat |
43444829 |
T |
|
| Q |
345 |
ctggccttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttcgtcaattttatcagcatcatctt |
425 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
43444828 |
ctggtcttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttcgtcaattttatcaacaccatctt |
43444748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 11 - 245
Target Start/End: Complemental strand, 18014943 - 18014709
Alignment:
| Q |
11 |
ctctcttaagaagtagagcttgatgttgaaatgtttagtcttcccatgacatactggatcctttgaaattgcaattgctgcctgactgtcgacaaagatt |
110 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| | ||| | | |
|
|
| T |
18014943 |
ctctcttaagaagtagagcttgatgttaaaatgtttagtcttgccatgacacactggatcctttgaaattgcaattgctgcctggttgtcaataaaaact |
18014844 |
T |
|
| Q |
111 |
tttgtcttatcattctgctagatatctaaatcacataaaaccttttttaaccataaaacttgatttgcagcagctgttgctgctatgaattcagcttctg |
210 |
Q |
| |
|
| | | |||| |||||| | | || ||||||||||||| ||| |||||||| |||||||||||| | || ||||||||||||||||| |||||||||| |
|
|
| T |
18014843 |
tctattttatgattctgttgaagatgcaaatcacataaaatcttctttaaccacaaaacttgatttacggctgctgttgctgctatgaactcagcttctg |
18014744 |
T |
|
| Q |
211 |
cagtggattgtgctacaatctcttgcttctttgtg |
245 |
Q |
| |
|
||||||| |||||||| | || |||||||||||| |
|
|
| T |
18014743 |
cagtggactgtgctactgtttcctgcttctttgtg |
18014709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 265 - 425
Target Start/End: Complemental strand, 18014544 - 18014384
Alignment:
| Q |
265 |
tattctttttgctgctatcaaatgcatttcactagcacaatgcataaaccgagagagaagacttatagcaaatagaatatctggccttgttgctgtgaga |
364 |
Q |
| |
|
||||||| ||||||||| ||||| |||||||||||||||||||||| || ||||| ||||||| | |||||| ||| || || |||||||| |||||| |
|
|
| T |
18014544 |
tattcttcttgctgctactaaatgtgtttcactagcacaatgcataaagcgggagaggagacttacaacaaataaaatgtccggtcttgttgcagtgaga |
18014445 |
T |
|
| Q |
365 |
tacattaaacatccaatcaagctcctataatatccttcgtcaattttatcagcatcatctt |
425 |
Q |
| |
|
||||||||||||||||||| ||||| || ||||||||||||| |||||||||| |||||| |
|
|
| T |
18014444 |
tacattaaacatccaatcatactcctgtagtatccttcgtcaactttatcagcaccatctt |
18014384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 26767412 - 26767364
Alignment:
| Q |
195 |
atgaattcagcttctgcagtggattgtgctacaatctcttgcttctttg |
243 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||| ||||| ||||||| |
|
|
| T |
26767412 |
atgaattctgcttctgcagttgactgtgctacaatatcttgtttctttg |
26767364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 221; Significance: 1e-121; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 26257767 - 26257523
Alignment:
| Q |
1 |
tttgttgaacctctcttaagaagtagagcttgatgttgaaatgtttagtcttcccatgacatactggatcctttgaaattgcaattgctgcctgactgtc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26257767 |
tttgttgaacctctcttaagaagtagagctttatgttgaaatgtttagtcttcccatgacatactggatcctttgaaattgcaattgttgcctgactgtc |
26257668 |
T |
|
| Q |
101 |
gacaaagatttttgtcttatcattctgctagatatctaaatcacataaaaccttttttaaccataaaacttgatttgcagcagctgttgctgctatgaat |
200 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
26257667 |
tacaatgatttttgtcttatcattctgctggatatctaaatcacataaaaccttttttaaccataaaacttgatttgcagcggctgttgctgctatgaat |
26257568 |
T |
|
| Q |
201 |
tcagcttctgcagtggattgtgctacaatctcttgcttctttgtg |
245 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26257567 |
tcagcttctgcagtggattgtgctacaatctcttgcttctttgtg |
26257523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 245 - 425
Target Start/End: Complemental strand, 26257378 - 26257198
Alignment:
| Q |
245 |
gtacctttaatataccttagtattctttttgctgctatcaaatgcatttcactagcacaatgcataaaccgagagagaagacttatagcaaatagaatat |
344 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
26257378 |
gtacctttaatatacctcagtattctttttgctgctatcaaatgcatttcactagcacaatgcataaaccgagagagaagacttacagcaaatagaatat |
26257279 |
T |
|
| Q |
345 |
ctggccttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttcgtcaattttatcagcatcatctt |
425 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26257278 |
ctggccttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttcgtcaattttatcagcaccatctt |
26257198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 153; Significance: 6e-81; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 16942751 - 16942507
Alignment:
| Q |
1 |
tttgttgaacctctcttaagaagtagagcttgatgttgaaatgtttagtcttcccatgacatactggatcctttgaaattgcaattgctgcctgactgtc |
100 |
Q |
| |
|
||||||| |||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
16942751 |
tttgttgcacctcttgtaagaagtagagcttgatattgaaatgtttagtcttcccataacatactggatcctttgaaattgcaattgctgcctgattgtc |
16942652 |
T |
|
| Q |
101 |
gacaaagatttttgtcttatcattctgctagatatctaaatcacataaaaccttttttaaccataaaacttgatttgcagcagctgttgctgctatgaat |
200 |
Q |
| |
|
| | |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||| | ||| ||||||| ||||||| |
|
|
| T |
16942651 |
aaaacagatttctgtcttatcattctgctggatatctaaatcacataaaacctcttttaaccacaaaacttgatttataacagttgttgctactatgaac |
16942552 |
T |
|
| Q |
201 |
tcagcttctgcagtggattgtgctacaatctcttgcttctttgtg |
245 |
Q |
| |
|
|||||||| ||| |||||||||| ||||| ||||||||||||||| |
|
|
| T |
16942551 |
tcagcttcagcattggattgtgcaacaatatcttgcttctttgtg |
16942507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 244 - 425
Target Start/End: Complemental strand, 16942363 - 16942181
Alignment:
| Q |
244 |
tgtacctttaatataccttagtattctttttgctgctatcaaatgcatttcactagcacaatgcataaaccgagagagaagacttatagcaaatagaata |
343 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| | ||||| | |||||||||| |
|
|
| T |
16942363 |
tgtacctttaatataccttaatactctttttgctgctattaaatgcatttcactagaacaatgcataaaccgagagagtaaacttacaacaaatagaatg |
16942264 |
T |
|
| Q |
344 |
tctggccttgttgctgtgagatacattaaacatccaatcaagctcctataatatccttcgtcaa-ttttatcagcatcatctt |
425 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||| |||||| |
|
|
| T |
16942263 |
tctggccttgttgacgtgagatacattaaacatccaatcaagcttctataatatccttcatcaatttttatcagcaccatctt |
16942181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 64; Significance: 8e-28; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 24012177 - 24012252
Alignment:
| Q |
12 |
tctcttaagaagtagagcttgatgttgaaatgtttagtcttcccatgacatactggatcctttgaaattgcaattg |
87 |
Q |
| |
|
|||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24012177 |
tctcgtaagaagtaaagcttgatgttaaaatgtttagtcttcccatgacatactggatcctttgaaattgcaattg |
24012252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 9791793 - 9791841
Alignment:
| Q |
195 |
atgaattcagcttctgcagtggattgtgctacaatctcttgcttctttg |
243 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||| ||||| ||||||| |
|
|
| T |
9791793 |
atgaattctgcttctgcagttgactgtgctacaatatcttgtttctttg |
9791841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 45995254 - 45995302
Alignment:
| Q |
195 |
atgaattcagcttctgcagtggattgtgctacaatctcttgcttctttg |
243 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||| ||||| ||||||| |
|
|
| T |
45995254 |
atgaattccgcttctgcagttgactgtgctacaatatcttgtttctttg |
45995302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 26709120 - 26709168
Alignment:
| Q |
195 |
atgaattcagcttctgcagtggattgtgctacaatctcttgcttctttg |
243 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||| ||||| ||||||| |
|
|
| T |
26709120 |
atgaattctgcttctgcagttgactgtgctacaatatcttgtttctttg |
26709168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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