View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4404_low_22 (Length: 220)

Name: NF4404_low_22
Description: NF4404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4404_low_22
NF4404_low_22
[»] chr2 (39 HSPs)
chr2 (1-220)||(8851188-8851408)
chr2 (87-220)||(26692698-26692834)
chr2 (84-220)||(17851279-17851416)
chr2 (84-220)||(19141724-19141863)
chr2 (87-220)||(26692436-26692572)
chr2 (87-220)||(41790530-41790666)
chr2 (86-220)||(16910867-16911006)
chr2 (86-220)||(7979605-7979743)
chr2 (84-220)||(18750015-18750140)
chr2 (84-220)||(8851466-8851596)
chr2 (1-220)||(6325146-6325361)
chr2 (84-220)||(41790787-41790926)
chr2 (84-220)||(7664556-7664687)
chr2 (87-218)||(18749767-18749903)
chr2 (84-217)||(19141486-19141614)
chr2 (84-220)||(7664288-7664418)
chr2 (84-220)||(16911151-16911283)
chr2 (1-61)||(16911030-16911090)
chr2 (86-220)||(17851018-17851147)
chr2 (84-220)||(6324957-6325089)
chr2 (86-220)||(7979889-7980017)
chr2 (158-220)||(37720244-37720307)
chr2 (1-55)||(7664476-7664530)
chr2 (132-220)||(5793487-5793578)
chr2 (1-61)||(7979770-7979830)
chr2 (118-220)||(5379868-5379973)
chr2 (19-61)||(17851170-17851212)
chr2 (86-220)||(38490717-38490855)
chr2 (182-220)||(2638860-2638898)
chr2 (118-220)||(5378701-5378806)
chr2 (23-61)||(17851219-17851257)
chr2 (86-121)||(37720446-37720481)
chr2 (182-220)||(2639458-2639496)
chr2 (182-220)||(7591241-7591279)
chr2 (182-220)||(7591826-7591864)
chr2 (182-220)||(18296116-18296154)
chr2 (25-59)||(26692636-26692670)
chr2 (182-220)||(26841627-26841665)
chr2 (182-220)||(26842214-26842252)
[»] chr1 (67 HSPs)
chr1 (1-220)||(48104718-48104939)
chr1 (2-217)||(21687068-21687286)
chr1 (84-220)||(50615496-50615635)
chr1 (84-220)||(50623324-50623463)
chr1 (1-217)||(46824071-46824289)
chr1 (87-220)||(49318044-49318180)
chr1 (84-220)||(49318320-49318457)
chr1 (87-220)||(50526350-50526486)
chr1 (84-219)||(4692062-4692199)
chr1 (84-217)||(4692308-4692444)
chr1 (84-220)||(9347166-9347306)
chr1 (1-220)||(28633949-28634171)
chr1 (84-220)||(50429955-50430095)
chr1 (84-220)||(999398-999539)
chr1 (84-220)||(42611225-42611366)
chr1 (84-217)||(9347425-9347562)
chr1 (1-220)||(27172155-27172372)
chr1 (84-220)||(999151-999289)
chr1 (87-217)||(6703772-6703905)
chr1 (1-218)||(44223913-44224131)
chr1 (84-220)||(44911065-44911204)
chr1 (84-219)||(28633761-28633892)
chr1 (84-220)||(42611488-42611628)
chr1 (87-220)||(44911315-44911451)
chr1 (84-217)||(20371081-20371214)
chr1 (84-220)||(50949440-50949579)
chr1 (84-220)||(50429696-50429836)
chr1 (91-220)||(21687348-21687481)
chr1 (84-220)||(32162925-32163057)
chr1 (84-217)||(49317794-49317930)
chr1 (91-220)||(13918486-13918618)
chr1 (84-220)||(27172424-27172555)
chr1 (84-220)||(26814734-26814865)
chr1 (84-220)||(46823883-46824014)
chr1 (84-220)||(48104998-48105130)
chr1 (84-171)||(50615289-50615376)
chr1 (84-171)||(50623117-50623204)
chr1 (123-220)||(20480207-20480307)
chr1 (84-220)||(6703500-6703630)
chr1 (84-220)||(26815003-26815133)
chr1 (84-163)||(50949241-50949320)
chr1 (84-220)||(13918748-13918881)
chr1 (129-220)||(20371272-20371367)
chr1 (86-220)||(20480499-20480626)
chr1 (1-59)||(6703688-6703746)
chr1 (1-55)||(26814891-26814945)
chr1 (1-58)||(20480383-20480439)
chr1 (1-61)||(13918629-13918689)
chr1 (129-217)||(47498342-47498433)
chr1 (119-217)||(32162772-32162867)
chr1 (87-199)||(44223745-44223851)
chr1 (25-61)||(50429897-50429933)
chr1 (25-61)||(50949343-50949379)
chr1 (26-61)||(9347369-9347404)
chr1 (117-220)||(19008658-19008764)
chr1 (19-61)||(6703651-6703693)
chr1 (19-61)||(27172367-27172409)
chr1 (153-215)||(6712215-6712281)
chr1 (25-61)||(32162867-32162903)
chr1 (26-61)||(42611390-42611425)
chr1 (182-220)||(6002870-6002908)
chr1 (182-220)||(49284449-49284487)
chr1 (24-61)||(21687286-21687323)
chr1 (182-218)||(6002279-6002315)
chr1 (19-59)||(28633914-28633954)
chr1 (19-59)||(44223878-44223918)
chr1 (19-59)||(48104934-48104974)
[»] chr7 (41 HSPs)
chr7 (84-220)||(48359359-48359497)
chr7 (1-220)||(20419117-20419338)
chr7 (1-220)||(18864007-18864227)
chr7 (87-220)||(17157007-17157143)
chr7 (1-220)||(22740385-22740605)
chr7 (1-220)||(37972189-37972410)
chr7 (84-220)||(37888873-37889014)
chr7 (87-220)||(3204971-3205107)
chr7 (84-220)||(37889133-37889273)
chr7 (84-220)||(3204707-3204846)
chr7 (84-220)||(10533074-10533213)
chr7 (93-220)||(13744117-13744247)
chr7 (85-220)||(29292962-29293100)
chr7 (87-220)||(29293224-29293360)
chr7 (87-209)||(9034919-9035044)
chr7 (86-220)||(13741597-13741733)
chr7 (84-220)||(9035166-9035307)
chr7 (84-220)||(42418631-42418771)
chr7 (84-220)||(38826786-38826927)
chr7 (84-220)||(36527423-36527562)
chr7 (86-220)||(22740196-22740326)
chr7 (84-220)||(18864285-18864416)
chr7 (84-220)||(20418928-20419060)
chr7 (84-220)||(37972000-37972131)
chr7 (84-209)||(42418910-42419031)
chr7 (84-220)||(36527683-36527812)
chr7 (1-60)||(13741760-13741819)
chr7 (1-56)||(42418797-42418852)
chr7 (143-220)||(48359592-48359672)
chr7 (25-61)||(9035069-9035105)
chr7 (25-61)||(37889076-37889112)
chr7 (26-61)||(36527584-36527619)
chr7 (19-61)||(13741814-13741856)
chr7 (183-220)||(46816288-46816325)
chr7 (27-59)||(3204909-3204941)
chr7 (182-220)||(13863353-13863391)
chr7 (182-220)||(44599529-44599567)
chr7 (182-220)||(44600111-44600149)
chr7 (182-215)||(13863933-13863966)
chr7 (24-61)||(37972153-37972189)
chr7 (19-59)||(18864222-18864261)
[»] chr3 (43 HSPs)
chr3 (1-220)||(22429388-22429610)
chr3 (1-220)||(36180594-36180815)
chr3 (84-220)||(3353425-3353565)
chr3 (1-220)||(40848755-40848975)
chr3 (84-217)||(47666210-47666346)
chr3 (84-220)||(27238505-27238644)
chr3 (84-220)||(3353167-3353304)
chr3 (86-220)||(26007221-26007358)
chr3 (1-220)||(48160126-48160347)
chr3 (87-220)||(42673017-42673153)
chr3 (84-205)||(44008022-44008146)
chr3 (84-220)||(53687928-53688066)
chr3 (84-220)||(27238783-27238914)
chr3 (84-220)||(53688178-53688317)
chr3 (84-220)||(40848560-40848695)
chr3 (84-220)||(42456076-42456209)
chr3 (1-220)||(24485250-24485474)
chr3 (84-220)||(24485061-24485192)
chr3 (84-220)||(22429198-22429330)
chr3 (86-220)||(47665951-47666088)
chr3 (87-217)||(10348522-10348656)
chr3 (84-220)||(10348681-10348813)
chr3 (84-220)||(42673178-42673310)
chr3 (84-170)||(53766466-53766552)
chr3 (84-219)||(26007502-26007632)
chr3 (84-220)||(48159937-48160070)
chr3 (84-220)||(53766203-53766331)
chr3 (1-61)||(26007381-26007441)
chr3 (84-220)||(36180872-36181004)
chr3 (87-173)||(42455859-42455945)
chr3 (1-58)||(27238668-27238725)
chr3 (1-58)||(44008170-44008227)
chr3 (84-217)||(44008283-44008412)
chr3 (86-170)||(21895722-21895807)
chr3 (9-61)||(53766395-53766447)
chr3 (86-220)||(21896390-21896525)
chr3 (1-59)||(42455965-42456019)
chr3 (19-61)||(40848718-40848760)
chr3 (25-58)||(47666115-47666148)
chr3 (19-59)||(27238720-27238760)
chr3 (30-61)||(3353372-3353403)
chr3 (19-59)||(22429354-22429393)
chr3 (19-59)||(48160092-48160131)
[»] chr6 (24 HSPs)
chr6 (4-220)||(22754887-22755103)
chr6 (84-220)||(7654423-7654562)
chr6 (1-220)||(33974091-33974313)
chr6 (1-220)||(32733788-32734010)
chr6 (84-220)||(10087734-10087872)
chr6 (84-220)||(29074247-29074386)
chr6 (84-220)||(29079011-29079150)
chr6 (84-220)||(29106820-29106959)
chr6 (84-219)||(2354449-2354587)
chr6 (89-220)||(2354691-2354824)
chr6 (84-219)||(13176660-13176798)
chr6 (87-219)||(32733598-32733725)
chr6 (84-218)||(22684240-22684370)
chr6 (84-218)||(22754698-22754828)
chr6 (92-218)||(13176947-13177068)
chr6 (4-61)||(22684124-22684181)
chr6 (84-205)||(33973919-33974033)
chr6 (1-55)||(13176826-13176880)
chr6 (19-59)||(33974056-33974096)
chr6 (19-58)||(32733754-32733793)
chr6 (19-61)||(10087671-10087713)
chr6 (19-61)||(13176875-13176917)
chr6 (182-220)||(33829030-33829068)
chr6 (182-220)||(33829612-33829650)
[»] chr4 (50 HSPs)
chr4 (1-218)||(25162106-25162325)
chr4 (87-220)||(169317-169453)
chr4 (1-217)||(292825-293043)
chr4 (87-220)||(28196386-28196522)
chr4 (84-220)||(28196647-28196787)
chr4 (1-220)||(9023284-9023505)
chr4 (1-220)||(9380347-9380568)
chr4 (84-220)||(23539879-23540018)
chr4 (87-220)||(32703265-32703401)
chr4 (84-220)||(32703524-32703664)
chr4 (84-220)||(39744339-39744479)
chr4 (84-220)||(23540127-23540266)
chr4 (84-217)||(48406004-48406141)
chr4 (87-220)||(26207400-26207536)
chr4 (87-220)||(48406263-48406399)
chr4 (84-220)||(169054-169194)
chr4 (84-220)||(39086496-39086637)
chr4 (87-220)||(43292237-43292371)
chr4 (1-220)||(12757806-12758028)
chr4 (87-220)||(39912365-39912501)
chr4 (84-220)||(25161918-25162050)
chr4 (84-220)||(9380624-9380755)
chr4 (105-220)||(26207642-26207760)
chr4 (84-220)||(293099-293231)
chr4 (116-220)||(4239273-4239380)
chr4 (84-220)||(9023562-9023694)
chr4 (84-216)||(12758086-12758214)
chr4 (86-220)||(39744070-39744199)
chr4 (87-207)||(39912106-39912220)
chr4 (1-61)||(39912281-39912341)
chr4 (132-220)||(43292077-43292168)
chr4 (1-54)||(39744259-39744312)
chr4 (134-220)||(44468849-44468937)
chr4 (25-61)||(169255-169291)
chr4 (25-61)||(28196549-28196585)
chr4 (25-61)||(32703426-32703462)
chr4 (26-61)||(39086398-39086433)
chr4 (18-61)||(43292169-43292212)
chr4 (19-61)||(9023500-9023542)
chr4 (19-61)||(12758023-12758065)
chr4 (19-61)||(39912244-39912286)
chr4 (25-59)||(48406202-48406236)
chr4 (19-61)||(293038-293079)
chr4 (19-61)||(9380563-9380604)
chr4 (19-61)||(25162070-25162111)
chr4 (182-220)||(36095857-36095895)
chr4 (182-220)||(36096451-36096489)
chr4 (182-220)||(50678819-50678857)
chr4 (182-219)||(50679400-50679437)
chr4 (182-218)||(43051228-43051264)
[»] chr8 (44 HSPs)
chr8 (87-220)||(24473646-24473782)
chr8 (84-220)||(37396748-37396891)
chr8 (84-220)||(34498430-34498569)
chr8 (84-220)||(41662561-41662701)
chr8 (84-218)||(24473385-24473522)
chr8 (84-205)||(16169482-16169606)
chr8 (84-220)||(6198970-6199110)
chr8 (84-220)||(34498162-34498291)
chr8 (87-220)||(9623542-9623678)
chr8 (87-207)||(15444264-15444387)
chr8 (84-220)||(37397028-37397159)
chr8 (84-220)||(6198698-6198830)
chr8 (84-220)||(33726986-33727119)
chr8 (84-191)||(33726734-33726844)
chr8 (84-220)||(20861519-20861652)
chr8 (86-220)||(15444531-15444661)
chr8 (84-220)||(25439009-25439140)
chr8 (1-61)||(6198886-6198946)
chr8 (84-220)||(17431327-17431456)
chr8 (1-61)||(41662758-41662818)
chr8 (1-59)||(25438903-25438961)
chr8 (1-58)||(16169401-16169458)
chr8 (1-61)||(33726868-33726928)
chr8 (1-59)||(34498349-34498407)
chr8 (1-61)||(15444411-15444471)
chr8 (84-217)||(16169216-16169345)
chr8 (1-59)||(9623704-9623762)
chr8 (1-61)||(37396913-37396970)
chr8 (19-61)||(37396965-37397007)
chr8 (25-61)||(24473584-24473620)
chr8 (182-220)||(13936762-13936800)
chr8 (84-121)||(9623822-9623859)
chr8 (19-59)||(15444466-15444506)
chr8 (19-59)||(33726923-33726963)
chr8 (157-220)||(2856566-2856632)
chr8 (19-61)||(9623757-9623799)
chr8 (182-220)||(9822788-9822826)
chr8 (182-220)||(9823337-9823375)
chr8 (182-220)||(13027257-13027295)
chr8 (87-149)||(15043660-15043722)
chr8 (1-31)||(17431514-17431544)
chr8 (182-220)||(39724024-39724062)
chr8 (19-59)||(17431479-17431519)
chr8 (33-61)||(34498313-34498341)
[»] chr5 (46 HSPs)
chr5 (84-220)||(19514566-19514706)
chr5 (87-219)||(3888540-3888675)
chr5 (1-220)||(22729233-22729454)
chr5 (1-220)||(26570959-26571178)
chr5 (84-219)||(3888280-3888418)
chr5 (84-219)||(41072089-41072227)
chr5 (87-220)||(12498803-12498942)
chr5 (94-220)||(12498607-12498736)
chr5 (84-220)||(34147179-34147319)
chr5 (84-220)||(2817189-2817328)
chr5 (84-220)||(37780628-37780756)
chr5 (84-220)||(43464075-43464206)
chr5 (1-218)||(37610243-37610453)
chr5 (84-220)||(2817451-2817589)
chr5 (84-220)||(21207266-21207398)
chr5 (87-220)||(26570769-26570897)
chr5 (87-220)||(34147390-34147524)
chr5 (87-220)||(19514848-19514977)
chr5 (84-220)||(10098559-10098684)
chr5 (86-220)||(22729047-22729174)
chr5 (1-196)||(25940757-25940955)
chr5 (1-220)||(10098743-10098955)
chr5 (84-220)||(37610503-37610632)
chr5 (87-220)||(11316860-11316988)
chr5 (1-61)||(21207455-21207515)
chr5 (1-61)||(43463959-43464019)
chr5 (84-218)||(37780361-37780489)
chr5 (84-220)||(43463795-43463935)
chr5 (84-217)||(30401925-30402056)
chr5 (1-59)||(19514729-19514787)
chr5 (84-220)||(25940561-25940697)
chr5 (1-49)||(30402113-30402161)
chr5 (155-220)||(25940959-25941028)
chr5 (1-58)||(37780514-37780571)
chr5 (26-61)||(41071991-41072026)
chr5 (25-59)||(3888479-3888513)
chr5 (19-61)||(10098706-10098748)
chr5 (19-61)||(19514782-19514824)
chr5 (24-61)||(25940717-25940754)
chr5 (184-220)||(11351405-11351441)
chr5 (182-217)||(11350850-11350885)
chr5 (182-220)||(18816992-18817030)
chr5 (182-220)||(18817587-18817625)
chr5 (19-61)||(26570922-26570964)
chr5 (19-61)||(43464014-43464055)
chr5 (19-59)||(22729199-22729238)
[»] scaffold0017 (3 HSPs)
scaffold0017 (1-220)||(185068-185288)
scaffold0017 (84-217)||(184882-185011)
scaffold0017 (19-61)||(185031-185073)
[»] scaffold0069 (3 HSPs)
scaffold0069 (1-217)||(50116-50332)
scaffold0069 (129-220)||(50426-50521)
scaffold0069 (33-61)||(50340-50368)
[»] scaffold0460 (2 HSPs)
scaffold0460 (1-220)||(370-591)
scaffold0460 (86-220)||(649-777)
[»] scaffold0041 (3 HSPs)
scaffold0041 (86-220)||(38291-38428)
scaffold0041 (84-220)||(38570-38709)
scaffold0041 (1-59)||(38489-38547)
[»] scaffold0029 (3 HSPs)
scaffold0029 (1-209)||(9957-10167)
scaffold0029 (84-190)||(10223-10332)
scaffold0029 (19-61)||(10162-10203)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-220)||(19835-20057)
scaffold0176 (99-220)||(19660-19778)
[»] scaffold0328 (1 HSPs)
scaffold0328 (182-220)||(6771-6809)


Alignment Details
Target: chr2 (Bit Score: 113; Significance: 2e-57; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 8851408 - 8851188
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||                      |||||||||||||||||    
T  8851408 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatttgaaaaataccatttttttattttttaaaaaa--tggaattacacacgtgg 8851311  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||  ||||||| |||||||||||||||||||    
T  8851310 cacacattaattgataaaaaacagacatatcaacactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttt 8851211  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  8851210 aaaactatggggtgcaaaatcgc 8851188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 26692698 - 26692834
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||| |||||    
T  26692698 aattacacacgtgacacacattaattgataaaaaacagacacatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggc 26692797  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  26692798 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 26692834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 17851279 - 17851416
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||||||||||||||||  ||||||||    
T  17851279 tggaattacacacgtggcacacattaattgataaaaa-cagacatatcagcactaaatgtcatggga-ccataaaatcagaaagggggaaaactataggg 17851376  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||| ||||||||    
T  17851377 ggcaaaatcgctcgtttaaaactatggggtgtaaaatcgc 17851416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 19141724 - 19141863
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    ||||||||||||||||||||| ||||||||||||| || | ||||||||||||||||||||||||||||| |||||||||||||||||  ||||||| ||    
T  19141724 tggaattacacacgtggcacatattaattgataaataataaacacatcagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactataggg 19141823  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  19141824 ggcaaaatcgctcgttttaaactatgggatgcaaaatcgc 19141863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 87 - 220
Target Start/End: Complemental strand, 26692572 - 26692436
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactataggg-gc 183  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| ||||||||||||||||   || ||||||| ||    
T  26692572 aattacacatgtggcacacattaattgataaaaaacagacacatcagcaataaatgtcttggggaccataaaatcagaaaggggaaaaattatagggagc 26692473  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  26692472 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 26692436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 87 - 220
Target Start/End: Complemental strand, 41790666 - 41790530
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||| ||  ||||||| |||||    
T  41790666 aattacacacgtggcacacattaattgataaataacagacacatcagcattaaatgtcatgagaaccataaaatcagaaaggaggaaaactatagggggc 41790567  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||| |||| |||||||||||||||||    
T  41790566 aaaatcgctcgttttaaacaatggggtgcaaaatcgc 41790530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 16911006 - 16910867
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaa--cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatag-g 180  Q
    |||||| |||||||||||||||||||||||||||||  |||||| |||| |||||||||||||||| ||| |||||||||||||| ||||  |||||| |    
T  16911006 gaattaaacacgtggcacacattaattgataaaaaaaacagacatatcaacactaaatgtcatggggaccataaaatcagaaaggaggaaaactatagag 16910907  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16910906 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 16910867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 7979743 - 7979605
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg 182  Q
    |||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||| || | | ||||||||||||| |||||  |||||||||    
T  7979743 gaattacacacgtgacacacattaattgataaaaaaacagacatatcagcactaaatgtcatagggatcataaaatcagaaagagggaaaactatagggg 7979644  T
Q  183 -caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
     ||||||||||||||||||||||||||||||||||||||    
T  7979643 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 7979605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 18750015 - 18750140
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaactataggggc 183  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||           |||||    
T  18750015 tggaattacacacgtgacacacattaattgataaaaaacaaacacatcagcactaaatgtcatggggaccataaaatcagaaag-----------ggggc 18750103  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  18750104 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 18750140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 8851466 - 8851596
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa-ctatagggg 182  Q
    ||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| ||| |||||||||||||||| || |||||||||    
T  8851466 tggaattacacacgtggcacacattaattgataaaaaa--------tcagcactaaatgtcatggggaccataaaatcagaaaggggaaaactatagggg 8851557  T
Q  183 -caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
     ||||||||||||||||||||||||||||||||||||||    
T  8851558 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 8851596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 6325146 - 6325361
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||                      ||||||||||||||||     
T  6325146 tttttcagattttaagaagaaatatcacgtgcctccttctttcaaaatctgaaaaataccattttttttttaaaaa-------tggaattacacacgtga 6325238  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||||||| ||| ||||||||||||| || | || ||| |||| ||||||| ||||  ||||||| |||||||||||||||||||    
T  6325239 cacacattaattgataaaaaacatacatatcagcactaaatatcctagggaccataaagtcagaaatggggaaaactatagggggcaaaatcgctcgttt 6325338  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    || |||||| |||||||||||||    
T  6325339 aatactatgaggtgcaaaatcgc 6325361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 41790787 - 41790926
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||| |||  ||||||| ||    
T  41790787 tggaattacactcgtggcacgcattaattgataaataacagacacatcaacactaaatatcatgggaaccataaaatcagaaagagggaaaactataggg 41790886  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||| |||| |||||| ||||||||||    
T  41790887 ggcaaaatcgctcgttttaaacaatggggggcaaaatcgc 41790926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 7664556 - 7664687
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||||||||||||||||||||||||| |         ||||||||||||||||| ||| |||||||||||||||||||  ||||||||    
T  7664556 tggaattacacacgtggcacacattaattgataaaaaaaac--------gcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 7664647  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  7664648 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 7664687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 18749903 - 18749767
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaa---cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggg-ggaactata-ggg 181  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||  || |||||||||||||||   ||||||| |||    
T  18749903 aattacacacgtggcacacattaattgataaaaaaaaacagacacatcagcactaaatgttatggggcccataaaatcagaaagggaaaaactatagggg 18749804  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatc 218  Q
    ||||||||  |||||||||||||||||||||||||||    
T  18749803 gcaaaatcattcgtttaaaactatggggtgcaaaatc 18749767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 19141614 - 19141486
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||| ||||||||  ||||||| ||    
T  19141614 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatggg--------gatcataaagggggaaaactataggg 19141523  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
    || ||| ||||||||||||||||||||||||||||||    
T  19141522 ggtaaattcgctcgtttaaaactatggggtgcaaaat 19141486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 7664418 - 7664288
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaac--tataggg 181  Q
    ||||||||||||||||||||||||||||||||||||||     ||    ||||||||| ||||||| ||| |||||||||||||||||||   |||||||    
T  7664418 tggaattacacacgtggcacacattaattgataaaaaa-----ac----gcactaaatatcatggggaccataaaatcagaaagggggaaaattataggg 7664328  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  7664327 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 7664288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 16911151 - 16911283
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||| | |||||||||||||||||||||||       | ||||||||||||||| ||  ||| |||||||||||||||||||  ||||||||    
T  16911151 tggaattacacatgcggcacacattaattgataaaaaa-------accagcactaaatgtcacggagaccataaaatcagaaagggggaaaactataggg 16911243  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  16911244 gacaaaatcgctcgtttaaaactatggggtgcaaaatcgc 16911283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16911090 - 16911030
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16911090 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 16911030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 17851147 - 17851018
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctata-gggg 182  Q
    |||||||||||||| |||||||||||||||||||||       | ||||||||||| ||||||| ||| |||||||| ||||||||||  ||||| ||||    
T  17851147 gaattacacacgtgacacacattaattgataaaaaa-------accagcactaaatatcatggggaccataaaatcataaagggggaaatctataggggg 17851055  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||| |||||||||||||||||||||||||    
T  17851054 caaaatcgctcg-ttaaaactatggggtgcaaaatcgc 17851018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 6325089 - 6324957
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||| | || ||||||||||||||||||       | |||||||||||||||||||  || ||||||||||||| |||||  ||||||||    
T  6325089 tggaattacacacgcgacatacattaattgataaaaaa-------accagcactaaatgtcatgggggccataaaatcagaaagagggaaaactataggg 6324997  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | |||||||||||||||||||||||||| |||||||||||    
T  6324996 gacaaaatcgctcgtttaaaactatgggatgcaaaatcgc 6324957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 7979889 - 7980017
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagg-gg 182  Q
    ||||||||||||||||||||||||||||||||||| ||          |||||||| ||||||| ||| |||||||||||||||| ||  ||||||| ||    
T  7979889 gaattacacacgtggcacacattaattgataaaaaccaa---------cactaaatatcatggggaccataaaatcagaaaggggaaaaactataggcgg 7979979  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||    
T  7979980 cgaaatcgctcgtttaaaactatggggtgcaaaatcgc 7980017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 37720307 - 37720244
Alignment:
Q  158 aatcagaaagggggaa-ctataggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  37720307 aatcagaaaggggaaaactataggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 37720244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7664476 - 7664530
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7664476 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatccgaaaa 7664530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 5793578 - 5793487
Alignment:
Q  132 agcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||| |||||||||||| ||| ||||||||||||| |||||  ||||||||| ||||||||||||||||||||||| || |||||||||||    
T  5793578 agcacaaaatgtcatggggaccataaaatcagaaagagggaaaactatagggggcaaaatcgctcgtttaaaactataggatgcaaaatcgc 5793487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7979830 - 7979770
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||    
T  7979830 tttttcagattttaagaagaaatgtcacgtgtctccttctctcaaaatatgaaaaatacca 7979770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 220
Target Start/End: Original strand, 5379868 - 5379973
Alignment:
Q  118 aaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactatagggg-caaaatcgctcgtttaaaactatggggtgcaa 214  Q
    ||||||||||||||||| | | |||||| ||| ||| | |||||||||||||||  || |||||||| ||||||||| ||||| |||||| |||||||||    
T  5379868 aaaacagacacatcagcgccagatgtcagggggaccatcaaatcagaaagggggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaa 5379967  T
Q  215 aatcgc 220  Q
    ||||||    
T  5379968 aatcgc 5379973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 17851212 - 17851170
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  17851212 gaaaaatcacgtgcctccttctctcaaaatctgaaaaatacca 17851170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 38490717 - 38490855
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatg-ggaaccctaaaatcagaaagggggaactata---ggg 181  Q
    ||||||||||||||||| ||||||| |||| ||||||||  |||||| ||||||| || ||| ||  || | |||||| ||||||||||  | |   ||     
T  38490717 gaattacacacgtggcaaacattaaatgatcaaaaacagctacatcatcactaaaagttatgaggggccttgaaatcataaagggggaaaaagatggggt 38490816  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||| ||| | |||||||||||    
T  38490817 gcaaaatcgctcgtttaaaaccatgagatgcaaaatcgc 38490855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 2638898 - 2638860
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  2638898 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgc 2638860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 5378806 - 5378701
Alignment:
Q  118 aaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactatagggg-caaaatcgctcgtttaaaactatggggtgcaa 214  Q
    ||||||||||||||||| | | ||| || ||| ||| | ||||||||||| |||  || |||||||| ||||||||| ||||| |||||| |||||||||    
T  5378806 aaaacagacacatcagcgccagatgccagggggaccatcaaatcagaaagagggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaa 5378707  T
Q  215 aatcgc 220  Q
    ||||||    
T  5378706 aatcgc 5378701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 17851219 - 17851257
Alignment:
Q  23 tatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  17851219 tatcacgtgtctccttctctcaaaatctgaaaaatacca 17851257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 121
Target Start/End: Original strand, 37720446 - 37720481
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaa 121  Q
    ||||||||||| ||||||||||||||||||||||||    
T  37720446 gaattacacacatggcacacattaattgataaaaaa 37720481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 2639458 - 2639496
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  2639458 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 2639496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 7591279 - 7591241
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  7591279 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 7591241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 7591826 - 7591864
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  7591826 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 7591864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 18296154 - 18296116
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  18296154 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 18296116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 26692636 - 26692670
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    ||||||| |||||||||||||||||||||||||||    
T  26692636 tcacgtgtctccttctctcaaaatctgaaaaatac 26692670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 26841665 - 26841627
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  26841665 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 26841627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 26842214 - 26842252
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  26842214 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 26842252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 2e-57; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 48104939 - 48104718
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||                      |||||||||||||||||    
T  48104939 tttttcagattttaagaagaaatatcacgcgcctccttctctcaaaatctgaaaaatgccattttttttattttaaaaaaaa-tggaattacacacgtgg 48104841  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||  ||||||| |||||||||||||||||||    
T  48104840 cacacattaattgataaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttt 48104741  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  48104740 aaaactatggggtgcaaaatcgc 48104718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 21687286 - 21687068
Alignment:
Q  2 ttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtggc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      ||||||||||||||||||    
T  21687286 ttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttttattttttaaaaaa-tggaattacacacgtggc 21687188  T
Q  102 acacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||||||| ||  ||||||| |||||||||||||||||||    
T  21687187 acacattaattgataaaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaaggaggaaaactatagggggcaaaatcgctcgttt 21687088  T
Q  198 aaaactatggggtgcaaaat 217  Q
    ||||||||||||||||||||    
T  21687087 aaaactatggggtgcaaaat 21687068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 50615496 - 50615635
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||    
T  50615496 tggaattacacacgtggcacacattaattgataaaaaacagacgcatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 50615595  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  50615596 ggcaaaatcgctcatttaaaactatggggtgcaaaatcgc 50615635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 50623324 - 50623463
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||    
T  50623324 tggaattacacacgtggcacacattaattgataaaaaacagacgcatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 50623423  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  50623424 ggcaaaatcgctcatttaaaactatggggtgcaaaatcgc 50623463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 46824071 - 46824289
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |                      ||||||||||||||||     
T  46824071 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatac-aattttttttatttttttaaaaatggaattacacacgtga 46824169  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||| ||||||||  ||||||| |||||||||||||||||||    
T  46824170 cacacattaattgataaaaaacagacatttcagcactaaatgtcatggggaccataaaatcaaaaagggggaaaactatagggggcaaaatcgctcgttt 46824269  T
Q  198 aaaactatggggtgcaaaat 217  Q
    ||||||||||||||||||||    
T  46824270 aaaactatggggtgcaaaat 46824289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 49318044 - 49318180
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||| |||||    
T  49318044 aattacacacgtggcacacattaattgataaataacagacacatcagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggggc 49318143  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||| |||||||||| |||||||||||    
T  49318144 aaaatcgctcgttttaaactatgggatgcaaaatcgc 49318180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 49318320 - 49318457
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaactatagggg- 182  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||     
T  49318320 tggaattacatatgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccataaaatcagaaagggaaaactatagggga 49318419  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
     ||||||||||||||||||||||||| |||||||||||    
T  49318420 taaaatcgctcgtttaaaactatgggatgcaaaatcgc 49318457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 50526350 - 50526486
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| |||||||||||||||||  ||||||| |||||    
T  50526350 aattacacacgtggcacacattaattgataaaaaacagacacatcagcattaaatgtcatgtggaccataaaatcagaaagggggaaaactatagggggc 50526449  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  50526450 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 50526486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 4692199 - 4692062
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg-aactata-ggg 181  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||    
T  4692199 tggaattacacacgtggcacacattaattgataaataacagacacatcagcactaaatgtcatgggaaccataaaatcagaaagggggaaactatagggg 4692100  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcg 219  Q
    ||||||| |||||||| ||||||| || ||||||||||    
T  4692099 gcaaaatggctcgttttaaactataggatgcaaaatcg 4692062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 4692308 - 4692444
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactatagg- 180  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||   |||||||||     
T  4692308 tggaattacacacgtggcacacattaattgataaaaaatagacacatcagcactaaatgtcatggggaccataaaatcagaaaggggaaaaactatagga 4692407  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
    || ||||||||||||||||||||||||||||||||||    
T  4692408 ggtaaaatcgctcgtttaaaactatggggtgcaaaat 4692444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 9347306 - 9347166
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagg 180  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| | ||| |||||||||||||||||||  |||||||    
T  9347306 tggaattacacacgtggcacacattaattgataaaaaaacagacacatcagcgctaaatgtcatgcggaccataaaatcagaaagggggaaaactatagg 9347207  T
Q  181 gg-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  9347206 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 9347166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 28633949 - 28634171
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||                      |||||||||||||||||    
T  28633949 tttttcagattttaagaagaaatatcacacgcctccttctctcaaaatctgaaaaataccattttttttattttaaaaaaaa-tggaattacacacgtgg 28634047  T
Q  101 cacacattaattgataaaa-aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgtt 196  Q
     |||||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||||||||||||||  ||||||| |||||||||||| |||||    
T  28634048 tacacattaattgataaaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgatcgtt 28634147  T
Q  197 taaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||    
T  28634148 taaaactatggggtgcaaaatcgc 28634171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 50429955 - 50430095
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaa-aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| ||||||||||||||| |  ||||||| |    
T  50429955 tggaattacacacgtggcacacattaattgataaaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagggagaaaactatagg 50430054  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  50430055 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 50430095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 999398 - 999539
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaa--aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata- 178  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| ||| |||||||||||||||||  |||||||     
T  999398 tggaattacacacgtggcacacattaattgataaaaaaaacagacgcatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatag 999497  T
Q  179 ggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  999498 ggggcaaaatcgctcgtttaaaactatgggttgcaaaatcgc 999539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 42611366 - 42611225
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa--cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactatag 179  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||| |||||||||||||||||  ||||||||    
T  42611366 tggaattacacacgtggcacatattaattgataaaaaaaacagacacatcaacactaaatgtcatgggaaccataaaatcagaaagggggaaaactatag 42611267  T
Q  180 g-ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | |||||||||||||||||||||||||| |||||||||||||    
T  42611266 gaggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgc 42611225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 9347425 - 9347562
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaac-agacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||||| |||||||||||||||||||| |||||||||||||||||  ||||||| |    
T  9347425 tggaattacacatgtggcacacattaattgataaaaaaatagacacatcaacactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagg 9347524  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9347525 gggcaaaatcgctcgtttaaaactatggggtgcaaaat 9347562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 27172372 - 27172155
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||                      || ||||||||||||||    
T  27172372 tttttcagatttttagaagaaatatcacgtccctccttctctcaaaatctgaaaaataccatttttttatttttaaaaaaa--tgaaattacacacgtgg 27172275  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    |||||||||||||||||||||||||||   || |||||||||||||||||| | |||||||||||||||||  ||||||| |||||||||||||||||||    
T  27172274 cacacattaattgataaaaaacagaca---caacactaaatgtcatgggaagcataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttt 27172178  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  27172177 aaaactatggggtgcaaaatcgc 27172155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 999289 - 999151
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagg-gggaactata-ggg 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||  ||| |||||||||||||| |  ||||||| |||    
T  999289 tggaattacacacgtggcacacattaattgataaaaaacagacacattaacactaaatgtcatggagaccataaaatcagaaaggagaaaactatagggg 999190  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  999189 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgc 999151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 6703772 - 6703905
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||  ||||||| | |||    
T  6703772 aattacacacgtggcatacattaattgataaaaaacagacatatcagcactaaatgtcatgaggaccataaaatcagaaagggggaaaactatatgaggc 6703871  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
    ||||||||||||||||||||||||||||||||||    
T  6703872 aaaatcgctcgtttaaaactatggggtgcaaaat 6703905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 44223913 - 44224131
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||                      || |||||||||||||     
T  44223913 tttttcatattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccatttttttattttttaaaaaa--tgaaattacacacgtga 44224010  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactatagggg-caaaatcgctcgttt 197  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  | ||| ||||||||||||||||   ||||||||||| |||||||||||||||    
T  44224011 cacacattaattgataaaaaacagacatatcagcactaaatgtcataaggaccataaaatcagaaaggggtaaaactataggggacaaaatcgctcgttt 44224110  T
Q  198 aaaactatggggtgcaaaatc 218  Q
    ||||||||||| |||||||||    
T  44224111 aaaactatgggatgcaaaatc 44224131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 44911204 - 44911065
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||| |||||||||||||||||  ||||||| ||    
T  44911204 tggaattacactcgtggcacgcattaattgataaataacagacacatcaacactaaatatcatgggaaccataaaatcagaaagggggaaaactataggg 44911105  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  44911104 ggcaaaatcgctcgttttaaacaatggggtgcaaaatcgc 44911065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 28633892 - 28633761
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    ||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  28633892 tggaattacacacgtggcacacattaattgataaaaaa-------accagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactataggg 28633800  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcg 219  Q
    | |||||||||||||||||||||||||||||||||||||    
T  28633799 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcg 28633761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 42611488 - 42611628
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaa-aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactata-g 179  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||| ||||||||||||||||   ||||||| |    
T  42611488 tggaattgcacacgtggcacacattaattgataaaaaaacagacacatcagcactaaatgttatggggaccataaaatcagaaaggggaaaaactatagg 42611587  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  42611588 gggcaaaatcgcttgtttaaaactatgaggtgcaaaatcgc 42611628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 44911315 - 44911451
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||| ||  ||||||| |||||    
T  44911315 aattacacacgtggcacacattaattgataaataacagacacatcagcattaaatgtcatgagaaccataaaatcagaaaggaggaaaactatagggggc 44911414  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||| |||| || ||||||||||||||    
T  44911415 aaaatcgctcgttttaaacaatagggtgcaaaatcgc 44911451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 20371214 - 20371081
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg-gaactata-ggg 181  Q
    |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||| || ||| ||||||||||||||||  ||||| | |||    
T  20371214 tggaattacacacgt--cacacattaattgataaaaaacagacatatcagcactaaatgtcatagggaccataaaatcagaaaggggaaaactacagggg 20371117  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
    ||||||||||||||||||||||||||||||||||||    
T  20371116 gcaaaatcgctcgtttaaaactatggggtgcaaaat 20371081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 50949440 - 50949579
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactata-gg 180  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||||   ||||||| ||    
T  50949440 tggaattacacacgtggcacacattaattgataaataacacacacatcagcactaaatgtcatgagaaccataaaatcagaaaggggaaaaactataggg 50949539  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||| |||| ||| | |||||||||||    
T  50949540 ggcaaaatcgctcgttttaaacaatgagatgcaaaatcgc 50949579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 50429836 - 50429696
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa--cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatag 179  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||||||  |||  ||||||    
T  50429836 tggaattacacacgtggcacacgttaattgataaaaaaaacagacacatcagcactaaatgtcatggga-ccataaaatcagaaaggatgaaaactatag 50429738  T
Q  180 ggg-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||| |||||||||||||||||||||||| |||||||||||||    
T  50429737 ggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgc 50429696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 21687348 - 21687481
Alignment:
Q  91 acacacgtggcacacattaattgataaaa-aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactatag-gggcaaa 186  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||| || ||| |||    
T  21687348 acacacgtggcacacattaattgataaaaaaacagacacatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactacagagggaaaa 21687447  T
Q  187 atcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||| ||| |||||||||    
T  21687448 atcgctcgtttaaaactatgaggtacaaaatcgc 21687481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 32162925 - 32163057
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctata-gg 180  Q
    ||||||||||||||||| ||||||||||||||||||||       ||||||||||||||||||||| ||| |||||||||||||||||||  ||||| ||    
T  32162925 tggaattacacacgtggaacacattaattgataaaaaa-------atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataagg 32163017  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32163018 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 32163057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 49317930 - 49317794
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    |||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||| |    
T  49317930 tggaattacacacgtgaca-acattaattgataaaaaaacagacacatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagg 49317832  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
    ||| ||||||||||||||||||||||||| ||||||||    
T  49317831 gggtaaaatcgctcgtttaaaactatgggatgcaaaat 49317794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 13918618 - 13918486
Alignment:
Q  91 acacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaa 187  Q
    |||||||||| |||||||||||||||||||||||||| || | ||||||||||||| |  ||| |||||||||||||||||  ||||||| |||||||||    
T  13918618 acacacgtggtacacattaattgataaaaaacagacatataaacactaaatgtcatagtgaccataaaatcagaaagggggaaaactatagggggcaaaa 13918519  T
Q  188 tcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||    
T  13918518 tcgctcgtttaaaactatggggtgcaaaatcgc 13918486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 27172424 - 27172555
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    ||||||||||||||||||| ||||||||||||||||||       | ||||||||||||||||||| ||| |||||||||||||||||||  ||||||||    
T  27172424 tggaattacacacgtggcagacattaattgataaaaaa-------accagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 27172516  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  27172517 gcaaaatcgctcgtttaaaacaatgggatgcaaaatcgc 27172555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 26814865 - 26814734
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||||||||||||||||||||||||| |         ||||||||||||||||| ||| |||||||||||||||||||  ||||||||    
T  26814865 tggaattacacacgtggcacacattaattgataaaaaaaac--------gcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 26814774  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  26814773 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 26814734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 46824014 - 46823883
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    ||||||||||||||||||||||||||||||||||||||        ||| |||||||||||||||| ||| |||||||||||||||||||  ||||||||    
T  46824014 tggaattacacacgtggcacacattaattgataaaaaa--------tcaacactaaatgtcatgggtaccataaaatcagaaagggggaaaactataggg 46823923  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||| ||||||||||||    
T  46823922 ggcaaaatcgctcgtttaaaactatggagtgcaaaatcgc 46823883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 48104998 - 48105130
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||||||| |||||||||||||||||       | ||||||||||| ||||||| ||| |||||||||||||||||||  ||||||||    
T  48104998 tggaattacacacgtggcacgcattaattgataaaaaa-------accagcactaaatatcatggggaccataaaatcagaaagggggaaaactataggg 48105090  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  48105091 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 48105130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 50615376 - 50615289
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg 171  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  50615376 tggaattacacacgtggcacatattaattgataaaaaacagacacatcagcattaaatgtcatggggaccataaaatcagaaaggggg 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 50623204 - 50623117
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg 171  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  50623204 tggaattacacacgtggcacatattaattgataaaaaacagacacatcagcattaaatgtcatggggaccataaaatcagaaaggggg 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 20480307 - 20480207
Alignment:
Q  123 agacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg-caaaatcgctcgtttaaaactatggggtgcaaaatcg 219  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||    
T  20480307 agacatatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcg 20480208  T
Q  220 c 220  Q
    |    
T  20480207 c 20480207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 6703630 - 6703500
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    ||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||| ||| |||||||||||| ||||||  ||||||||    
T  6703630 tggaattacacacgtggcacacattaattgataaaaaccag---------cactaaatgtcatggggaccataaaatcagaaaaggggaaaactataggg 6703540  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | |||||||||||||||||||||||| |||||||||||||    
T  6703539 ggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgc 6703500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 26815003 - 26815133
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaac--tataggg 181  Q
    ||||||||||||||||||||||||||||||||||||||     ||    ||||||||| ||||||| ||| |||||||||||||||||||   |||||||    
T  26815003 tggaattacacacgtggcacacattaattgataaaaaa-----ac----gcactaaatatcatggggaccataaaatcagaaagggggaaaattataggg 26815093  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  26815094 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 26815133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 50949320 - 50949241
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcag 163  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||    
T  50949320 tggaattacacacgtgacacacattaattgataaataacagacacatcagcactaaatgtcatgagaaccataaaatcag 50949241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 13918748 - 13918881
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||| ||||||||||||||||||||| |       ||||||||||||||||||| ||| |||||||| || |||||||  ||||||||    
T  13918748 tggaattacacacgtgacacacattaattgataaaaaaaaa------cagcactaaatgtcatggggaccataaaatcaaaaggggggaaaactataggg 13918841  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | |||||||| ||||||||||||||| |||||||||||||    
T  13918842 ggcaaaatcgttcgtttaaaactatgaggtgcaaaatcgc 13918881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 20371272 - 20371367
Alignment:
Q  129 atcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgtttaaaactat-ggggtgcaaaatcgc 220  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||  ||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  20371272 atcagcattaaatgtcatggggaccataaaatcagaaagggggtaaactatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgc 20371367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 20480499 - 20480626
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaac--tataggggc 183  Q
    |||| |||||||||||||||||||||  ||||||||        |||||| ||||||||||||| ||| |||||||||||||||| |||  ||||||||     
T  20480499 gaatcacacacgtggcacacattaatgcataaaaaa--------tcagcattaaatgtcatggggaccataaaatcagaaaggggaaacactataggggg 20480590  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||| |||||||||||||||||| ||||||||||||||    
T  20480591 aaa-tcgctcgtttaaaactatagggtgcaaaatcgc 20480626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6703688 - 6703746
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  6703688 tttttcagattttaagaagaaatatcacatacctccttctctcaaaatctgaaaaatac 6703746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 26814945 - 26814891
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaa 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26814945 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatccgaaaa 26814891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20480439 - 20480383
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaata 58  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20480439 tttttcagattttaa-aagaaatatcacgtgcctccttctctcaaaatctgaaaaata 20480383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13918689 - 13918629
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  13918689 tttttcagattttaagaagaaatatcacatgcttccttttctcaaaatctgaaaaatacca 13918629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 47498433 - 47498342
Alignment:
Q  129 atcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatag-gggcaaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
    ||||||||||||||||||||  ||| |||||||| |||||| |||  |||||| ||||||||||||| ||||||||||||||| ||||||||    
T  47498433 atcagcactaaatgtcatggagaccataaaatcaaaaagggagaaaactatagagggcaaaatcgcttgtttaaaactatgggatgcaaaat 47498342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 32162867 - 32162772
Alignment:
Q  119 aaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactataggggcaaaatcgctcgtttaaaactatggggtgcaaaa 216  Q
    ||||| ||| ||||||| ||||||||||||| ||| ||||||||||||||||   |||||||||||    || |||||||||||||||||||||||||||    
T  32162867 aaacaaacatatcagcattaaatgtcatggggaccataaaatcagaaaggggaaaaactatagggg----at-gctcgtttaaaactatggggtgcaaaa 32162773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 44223851 - 44223745
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg-c 183  Q
    |||||||||| |||||| ||||||||||||||||||        ||||||||||||||||| || || |||||||||||||||| ||  ||||||||| |    
T  44223851 aattacacacatggcacgcattaattgataaaaaac--------cagcactaaatgtcatgaga-ccataaaatcagaaaggggaaaaactatagggggc 44223761  T
Q  184 aaaatcgctcgtttaa 199  Q
    ||||||||||||||||    
T  44223760 aaaatcgctcgtttaa 44223745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 50429897 - 50429933
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||    
T  50429897 tcacgtgcctccttctctcaaaatctgaaaaatacca 50429933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 50949379 - 50949343
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||    
T  50949379 tcacgtgcctccttctctcaaaatctgaaaaatacca 50949343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 9347369 - 9347404
Alignment:
Q  26 cacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  9347369 cacgtgcctccttctctcaaaatctgaaaaatacca 9347404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 19008658 - 19008764
Alignment:
Q  117 aaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaac--tatagggg-caaaatcgctcgtttaaaactatggggtgca 213  Q
    |||||||||||||||||| | | |||  | ||| ||| | |||||||||||||||||   |||||||| |||||| || ||||| |||||||||||||||    
T  19008658 aaaaacagacacatcagcgccagatgcaaggggtaccatcaaatcagaaagggggaaaattatagggggcaaaattgcacgttttaaactatggggtgca 19008757  T
Q  214 aaatcgc 220  Q
    |||||||    
T  19008758 aaatcgc 19008764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 6703693 - 6703651
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  6703693 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatacca 6703651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 27172367 - 27172409
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  27172367 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatacca 27172409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 6712281 - 6712215
Alignment:
Q  153 cctaaaatcagaaagggggaa--ctataggggca--aaatcgctcgtttaaaactatggggtgcaaa 215  Q
    |||||||||  ||||||||||  ||||||||| |  |||||||||||||||||||||||||||||||    
T  6712281 cctaaaatcgaaaagggggaaaactatagggggataaaatcgctcgtttaaaactatggggtgcaaa 6712215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 32162867 - 32162903
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||| |||||||||||||||||||||||||||    
T  32162867 tcacgtgcccccttctctcaaaatctgaaaaatacca 32162903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 42611425 - 42611390
Alignment:
Q  26 cacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||||||||||||| ||||||||||||||||    
T  42611425 cacgtgcctccttctctcagaatctgaaaaatacca 42611390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 6002870 - 6002908
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  6002870 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 6002908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 49284487 - 49284449
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  49284487 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 49284449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 21687286 - 21687323
Alignment:
Q  24 atcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||| | |||||||||||||||||||||||||    
T  21687286 atcacgtgccccattctctcaaaatctgaaaaatacca 21687323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 6002315 - 6002279
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatc 218  Q
    ||||||||||||||||||||  |||||||||||||||    
T  6002315 gcaaaatcgctcgtttaaaaacatggggtgcaaaatc 6002279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 28633954 - 28633914
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||| |||||||||| |||||||||||||||| ||||||||    
T  28633954 gaaaaatcacgtgcccccttctctcaaaatctaaaaaatac 28633914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 44223918 - 44223878
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||| |||| ||||| |||||||||||||||||||||||||    
T  44223918 gaaaaatcatgtgcccccttctctcaaaatctgaaaaatac 44223878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 48104934 - 48104974
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||| |||||||||| |||||||||||||||| ||||||||    
T  48104934 gaaaaatcacgtgcccccttctctcaaaatctaaaaaatac 48104974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 3e-56; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 48359497 - 48359359
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg-aactata-ggg 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||    
T  48359497 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatggggaccataaaatcagaaagggggaaactatagggg 48359398  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | |||||||||||||||||||||||||||||||||||||    
T  48359397 gtaaaatcgctcgtttaaaactatggggtgcaaaatcgc 48359359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 20419117 - 20419338
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      |||||||||||||||||    
T  20419117 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccatttttttattttttaaaaaa--tggaattacacacgtgg 20419214  T
Q  101 cacacattaattgataaaa-aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgtt 196  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||| |||||||||||||||||  ||||||| ||||||||||||||||||    
T  20419215 cacacattaattgataaaaaaacagacatatcagcactaaatgtcacggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtt 20419314  T
Q  197 taaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||    
T  20419315 taaaactatggggtgcaaaatcgc 20419338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 18864227 - 18864007
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||                      || |||||||||||||     
T  18864227 tttttcagattttaagaagaaatatcatgtgcctccttctctcaaaatctgaaaaataccatttttttatttttaaaaaaa--tgaaattacacacgtga 18864130  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||  ||||||| |||||||||||||||||||    
T  18864129 cacacattaattgataaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttt 18864030  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  18864029 aaaactatggggtgcaaaatcgc 18864007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 87 - 220
Target Start/End: Complemental strand, 17157143 - 17157007
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||| |||||    
T  17157143 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggc 17157044  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||| ||||||||||||||||||||||||||    
T  17157043 aaaatcgctcatttaaaactatggggtgcaaaatcgc 17157007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 22740385 - 22740605
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      || ||||||||||||||    
T  22740385 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttttatttttaaaaaaa-tgaaattacacacgtgg 22740483  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg-gaactataggg-gcaaaatcgctcgttta 198  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||| ||| || ||||| |||||||  |||||||||| |||||||||||||||||    
T  22740484 cacgcattaattgataaaaaacagacatatcagcactaaatgtcatggggaccatagaatcataaaggggaaaactatagggagcaaaatcgctcgttta 22740583  T
Q  199 aaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||    
T  22740584 aaactatggggtgcaaaatcgc 22740605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 37972189 - 37972410
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||                      ||||||||| |||| ||    
T  37972189 ttttttagattttaagaagaaatatcacgtgtctccttctctcaaaatctgaaaaataccattttttttattttttaaaaaa-tggaattacgcacgcgg 37972287  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||| |||||||||  ||||||| |||||||||||||||||||    
T  37972288 cacacattaattgataaaaaacagacatatcagcactaaatgtcatggggaccataaaatctgaaagggggaaaactatagggggcaaaatcgctcgttt 37972387  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  37972388 aaaactatggggtgcaaaatcgc 37972410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 37889014 - 37888873
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa--cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata- 178  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||  |||||||     
T  37889014 tggaattacacacgtggcacacgttaattgataaaaaaaacagacacatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatag 37888915  T
Q  179 ggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37888914 ggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 37888873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 3204971 - 3205107
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||||||||||  ||||||| |||||    
T  3204971 aattacacacgtggcacacattaattgataaaaaacagatacatcaacactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggc 3205070  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||| |||||||||||||||    
T  3205071 aaaatcgctcgtttaaaactacggggtgcaaaatcgc 3205107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 37889133 - 37889273
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaa-aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| |  ||||||| |    
T  37889133 tggaattacacacgtggcacacgttaattgataaaaaaacagacacatcagcactaaatgtcatggggaccataaaatcagaaagggagaaaactatagg 37889232  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37889233 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 37889273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 3204846 - 3204707
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||| |||  ||||||| ||    
T  3204846 tggaattacacacgtggcacacattaattgataaaaaatagacacatcagcaataaatgtcatggggaccataaaatcagaaagagggaaaactataggg 3204747  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  3204746 ggcaaaattgctcgtttaaaactatggggtgcaaaatcgc 3204707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 10533213 - 10533074
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||| |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||    
T  10533213 tggaatcacacacgtggcacaaattaattaataaaaaacaaacacatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 10533114  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10533113 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 10533074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 13744117 - 13744247
Alignment:
Q  93 acacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatc 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||||||  ||||||| |||||||||||    
T  13744117 acacgtggcacacattaattgataaaaaacagacacatcagcactaaatatcatggggaccataaaatcaaaaagggggaaaactatagggggcaaaatc 13744216  T
Q  190 gctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||    
T  13744217 gctcgtttaaaactatggggtgcaaaatcgc 13744247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 85 - 220
Target Start/End: Complemental strand, 29293100 - 29292962
Alignment:
Q  85 ggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggg 181  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||| |||    
T  29293100 ggaattacacacgtggcacacaataattgataaataacagacacatcagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggg 29293001  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||| |||| ||||| |||||||||||    
T  29293000 gcaaaatcgctcgttttaaacaatgggatgcaaaatcgc 29292962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 29293224 - 29293360
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||  ||||||| |||||    
T  29293224 aattacacacgtggcacacattaattgataaataacagacacatcagcagtaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggggc 29293323  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||| |||| |||| ||||||||||||    
T  29293324 aaaatcgctcgttttaaacaatggagtgcaaaatcgc 29293360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 87 - 209
Target Start/End: Complemental strand, 9035044 - 9034919
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||  ||||||| |||||    
T  9035044 aattacacacgtggcacacattaattaataaaaaacagacacatcagcattaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggc 9034945  T
Q  184 aaaatcgctcgtttaaaactatgggg 209  Q
    ||||||||||||||||||||||||||    
T  9034944 aaaatcgctcgtttaaaactatgggg 9034919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 13741733 - 13741597
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gggg 182  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| | ||||||||||| |||  ||||||| ||||    
T  13741733 gaattacacacgtggcacacattaattgataaaaaacagacagatcagcactaaatgtcacggggaccat-aaatcagaaagtgggaaaactataggggg 13741635  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13741634 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 13741597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 9035166 - 9035307
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg---aactatag 179  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||  | ||| ||||||||||||||||    ||||||||    
T  9035166 tggaattacacacgtggcacacattaattgataaaaaaacagacacatcatcactaaatgtcatctggaccataaaatcagaaaggggagaaaactatag 9035265  T
Q  180 ggg-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  9035266 ggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 9035307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 42418771 - 42418631
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||| |||||| ||||||||||  ||||||| |    
T  42418771 tggaattacacacgtggcacacattaattgataaaaaaacagacatatcagcactaaatgtcatggggaccataaaattagaaagggggaaaactatagg 42418672  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||| || | |||||||||    
T  42418671 gggcaaaatcgctcgtttaaaactataggatacaaaatcgc 42418631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 38826786 - 38826927
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaa--aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata- 178  Q
    |||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||| | | |||||||||||||||||  |||||||     
T  38826786 tggaattacacacgtgacacacattaattgataaaagaaacagacacatcagcactaaatgtcatggggatcataaaatcagaaagggggaaaactatag 38826885  T
Q  179 ggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||| || ||||||||||||||| |||||||||||||    
T  38826886 ggggcaaaaccgttcgtttaaaactatgaggtgcaaaatcgc 38826927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 36527562 - 36527423
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactat-agg 180  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||| ||  ||||||||||||||||   |||||| |||    
T  36527562 tggaattacacacgtggcacacattaattgataaaaaatagacacatcatcaccaaatgtcatggggactataaaatcagaaaggggaaaaactataagg 36527463  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    || ||||| | |||||||||||||||||||||||||||||    
T  36527462 ggaaaaattgatcgtttaaaactatggggtgcaaaatcgc 36527423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 22740326 - 22740196
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg- 182  Q
    |||||||||| |||||||||||||||||||||||||       | ||||||||||||||||||| ||| |||||||||||||||||||  |||||||||     
T  22740326 gaattacacatgtggcacacattaattgataaaaaa-------accagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggggg 22740234  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22740233 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 22740196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 18864285 - 18864416
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    ||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||    
T  18864285 tggaattacacacgtggcacacattaattgataaaaaa--------tcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 18864376  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  18864377 ggcaaaatcgctcttttaaaactatgaggtgcaaaatcgc 18864416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 20419060 - 20418928
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||| |||||||||||||||||||||       | ||||||||||||||||||| ||| ||||||||||||||| |||  ||||||||    
T  20419060 tggaattacacacgtgacacacattaattgataaaaaa-------accagcactaaatgtcatggggaccataaaatcagaaagggtgaaaactataggg 20418968  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  20418967 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 20418928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 37972131 - 37972000
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||| ||||||||||||||||||||||        |||| |||||||||||||| ||| |||||||||||||||| ||  ||||||||    
T  37972131 tggaattacacacgtgacacacattaattgataaaaaac--------cagcgctaaatgtcatggggaccataaaatcagaaaggggaaaaactataggg 37972040  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  37972039 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 37972000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 84 - 209
Target Start/End: Original strand, 42418910 - 42419031
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    ||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||    
T  42418910 tggaattacacacgtggcacacattaattgataaaaaa-------accagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 42419002  T
Q  181 ggcaaaatcgctcgtttaaaactatgggg 209  Q
    |||||||||||||||||||||||||||||    
T  42419003 ggcaaaatcgctcgtttaaaactatgggg 42419031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 36527683 - 36527812
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    ||||||||||||||||||||| |||||||||||||||||||||          ||||||||||||  ||| |||||||||||||||||||  ||||||||    
T  36527683 tggaattacacacgtggcacatattaattgataaaaaacagac----------taaatgtcatggagaccataaaatcagaaagggggaaaactataggg 36527772  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | |||||||||||||||||||||||||| |||||||||||    
T  36527773 ggcaaaatcgctcgtttaaaactatgggatgcaaaatcgc 36527812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13741819 - 13741760
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13741819 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacc 13741760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42418852 - 42418797
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaa 56  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42418852 tttttcagattttaagaagaaatatcacgtgcctcattctctcaaaatctgaaaaa 42418797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 48359592 - 48359672
Alignment:
Q  143 tcatgggaaccctaaaatcagaaagggggaa--ctatagggg-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  48359592 tcatgggaaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgtggtgcaaaatcgc 48359672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 9035105 - 9035069
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||    
T  9035105 tcacgtgcctccttctctcaaaatctgaaaaatacca 9035069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 37889076 - 37889112
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||    
T  37889076 tcacgtgcctccttctctcaaaatctgaaaaatacca 37889112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 36527619 - 36527584
Alignment:
Q  26 cacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  36527619 cacgtgcctccttctctcaaaatctgaaaaatacca 36527584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 13741814 - 13741856
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  13741814 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatacca 13741856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 46816288 - 46816325
Alignment:
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  46816288 caaaatcgctcgtttaaaaatatggggtgcaaaatcgc 46816325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 3204909 - 3204941
Alignment:
Q  27 acgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||||||||||||||||||||||||||||||||    
T  3204909 acgtgcctccttctctcaaaatctgaaaaatac 3204941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 13863391 - 13863353
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  13863391 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 13863353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 44599567 - 44599529
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  44599567 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 44599529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 44600111 - 44600149
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  44600111 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 44600149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 13863933 - 13863966
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaa 215  Q
    |||||||||||||||||||| |||||||||||||    
T  13863933 gcaaaatcgctcgtttaaaaatatggggtgcaaa 13863966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 37972189 - 37972153
Alignment:
Q  24 atcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  37972189 atcacgtgc-tccttctctcaaaatctgaaaaatacca 37972153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 18864222 - 18864261
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  18864222 gaaaaatcacgtgc-tccttctctcaaaatctgaaaaatac 18864261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 1e-55; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 22429388 - 22429610
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |                      ||||||||||||||||     
T  22429388 tttttcagattttaagaagaaatatcacgtgcctcattctctcaaaatctgaaaaatactatttttttttattttttaaaaaatggaattacacacgtga 22429487  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||   ||||||| |||||||||||||||||||    
T  22429488 cacacattaattgataaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgttt 22429587  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  22429588 aaaactatggggtgcaaaatcgc 22429610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 36180815 - 36180594
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      ||||||||||||||||     
T  36180815 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttttattttttaaaaaa-tggaattacacacgtga 36180717  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactatagggg-caaaatcgctcgttt 197  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||  ||||||||||| |||||||||||||||    
T  36180716 cacacgttaattgataaaaaacagacatatcaacactaaatgtcatggggaccataaaatcagaaagggggaaaactataggggtcaaaatcgctcgttt 36180617  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    ||||||||||| |||||||||||    
T  36180616 aaaactatgggatgcaaaatcgc 36180594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 3353425 - 3353565
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaa--aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg-aactata-g 179  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |    
T  3353425 tggaattacacacgtggcacacattaattgataaaaaaaacagacacatcagcactaaatgtcatggggaccataaaatcagaaagggggaaactatagg 3353524  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  3353525 gggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgc 3353565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 40848755 - 40848975
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||                      |||||||||||||||||    
T  40848755 tttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctgaaaaataccatttttttattttttaaaaaa--tggaattacacacgtgg 40848852  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    |||||||||||||||||||||||| || |||| |||||||||||||||| ||| ||||||||||||||| |  ||||||| |||||||||||||| ||||    
T  40848853 cacacattaattgataaaaaacaggcatatcaacactaaatgtcatggggaccataaaatcagaaagggtgaaaactatagggggcaaaatcgcttgttt 40848952  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  40848953 aaaactatggggtgcaaaatcgc 40848975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 47666210 - 47666346
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||  ||||||| ||    
T  47666210 tggaattacacacgtggcacacattaattgataaataacacacacatcagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactataggg 47666309  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  47666310 ggcaaaatcgctcgttttaaacaatggggtgcaaaat 47666346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 27238644 - 27238505
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||| |||||||||||||||||  ||||||| ||    
T  27238644 tggaattacacacatggcacacattaattgataaaaaacagacatatcagcactaaaagtcatggggaccataaaatcagaaagggggaaaactataggg 27238545  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  27238544 ggcaaaatcgctcgtttaaaactatagggtgcaaaatcgc 27238505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 3353304 - 3353167
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactataggg 181  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||  ||||||||||    
T  3353304 tggaattacacacagggcacacattaattgataaaaaacagacacatcagtactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 3353205  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |  ||||||||||||||||||||||||||||||||||||    
T  3353204 g-gaaatcgctcgtttaaaactatggggtgcaaaatcgc 3353167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 26007358 - 26007221
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaag--ggggaactatag-ggg 182  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| |||||||||||||  ||  |||||||| |||    
T  26007358 gaattacacacgtggcacacattaattgataaaaaacagatatatcagcactaaatgtcatggggaccataaaatcagaaagatggaaaactatagaggg 26007259  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26007258 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 26007221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 48160126 - 48160347
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||                      |||||||||||||||||    
T  48160126 tttttcagatttttagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataacattttttttattttttaaaaaa-tggaattacacacgtgg 48160224  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||||||||| | || | |||||||||||||||| | | ||||||||||||||||   ||||||| |||||||||||||||||||    
T  48160225 cacacattaattgataaaaaacagaaaaattaacactaaatgtcatggggatcataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgttt 48160324  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  48160325 aaaactatggggtgcaaaatcgc 48160347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 87 - 220
Target Start/End: Complemental strand, 42673153 - 42673017
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||  || |||||||| ||||||||  ||||||| |||||    
T  42673153 aattacacacgtggcacacattaattgataaaaaacggacatatcagcactaaatgtcatgggggccataaaatcataaagggggaaaactatagggggc 42673054  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||| |||||||||||||||||||||||||||||    
T  42673053 aaaatcgatcgtttaaaactatggggtgcaaaatcgc 42673017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 84 - 205
Target Start/End: Complemental strand, 44008146 - 44008022
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactata-gg 180  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||   ||||||| ||    
T  44008146 tggaattacacacgtgacacacattaattgataaaaaacagacatatcagcactaaatgtcatgggaaccataaaatcagaaaggggaaaaactataggg 44008047  T
Q  181 ggcaaaatcgctcgtttaaaactat 205  Q
    |||||||||||||||||||||||||    
T  44008046 ggcaaaatcgctcgtttaaaactat 44008022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 53688066 - 53687928
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||||||||| ||| |||||||||||||||||  ||||||| ||    
T  53688066 tggaattacacacgtggcacacgttaattgataaaaa-cagacacatcaacgctaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 53687968  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    || |||||||||||||||||||||||||||||||||||||    
T  53687967 ggtaaaatcgctcgtttaaaactatggggtgcaaaatcgc 53687928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 27238783 - 27238914
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactataggg 181  Q
    |||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  27238783 tggaattacacacgtggcacacattaattgataaaaaac--------cagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactataggg 27238874  T
Q  182 -gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
     |||||||||||||||||||||||||||||||||||||||    
T  27238875 agcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 27238914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 53688178 - 53688317
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||| |||||||||||||||||||||| |||||||| |||| |||||||||||||| ||| | |||||||||||||||||  ||||||| ||    
T  53688178 tggaattacacatgtggcacacattaattgataaataacagacatatcaacactaaatgtcatgagaatcataaaatcagaaagggggaaaactataggg 53688277  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  53688278 ggcaaaatcgctcgttttaaactatggagtgcaaaatcgc 53688317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 40848695 - 40848560
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||||||||||||||||||||||||| | ||    |||| |||||||||||||| ||| |||||||||||||||||||  ||||||||    
T  40848695 tggaattacacacgtggcacacattaattgataaaaaaaaaac----cagcgctaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 40848600  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||| ||||||||    
T  40848599 ggcaaaatcgctcgtttaaaactatggggtgtaaaatcgc 40848560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 42456076 - 42456209
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa-ctatagggg 182  Q
    ||||||||||||||||||||||||||||| |||||||| |     | || |||||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  42456076 tggaattacacacgtggcacacattaatttataaaaaaaa-----accatcactaaatgtcatggggaccataaaatcagaaagggggaaactatagggg 42456170  T
Q  183 -caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
     ||||||||||||||||||||||||||||||||||||||    
T  42456171 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 42456209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 24485250 - 24485474
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||                      |||||||||||||||||    
T  24485250 tttttcacattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccatttttttatttttaaaaaaa--tggaattacacacgtgg 24485347  T
Q  101 cacacattaattgataaaaaa-----cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg-caaaatcgct 192  Q
     ||||||||||||||||||||     || ||| ||||||||||| ||||||||| ||| |||||| ||||||||||||  ||||||||| ||||||||||    
T  24485348 tacacattaattgataaaaaagaaaacaaacatatcagcactaa-tgtcatggggaccataaaattagaaagggggaatactatagggggcaaaatcgct 24485446  T
Q  193 cgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||    
T  24485447 catttaaaactatggggtgcaaaatcgc 24485474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 24485192 - 24485061
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    ||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||| ||| |||||||||||||||| ||  ||||||||    
T  24485192 tggaattacacacgtggcacacattaattgataaaaaa--------tcagcactaaatgtcatggggaccataaaatcagaaaggggaaaaactataggg 24485101  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | | ||||||||||||||||||||||||||||||||||||    
T  24485100 ggcgaaatcgctcgtttaaaactatggggtgcaaaatcgc 24485061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 22429330 - 22429198
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactataggg 181  Q
    |||||||||||| |||||||||||||||||||||||||       ||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||    
T  22429330 tggaattacacatgtggcacacattaattgataaaaaa-------atcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 22429238  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||| ||||||||| ||||    
T  22429237 gacaaaatcgctcgtttaaaactattgggtgcaaagtcgc 22429198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 47666088 - 47665951
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactatagg-gg 182  Q
    ||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||| ||||| |||||||| ||||||||  ||||||||| ||    
T  47666088 gaattacacacgtggcacacattaattgataaataatagacacatcaccactaaatgtcatgagaaccataaaatcaaaaagggggaaaactataggtgg 47665989  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
     |||||| ||||||| |||| ||| |||||||||||||    
T  47665988 taaaatcactcgttttaaacaatgaggtgcaaaatcgc 47665951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 10348656 - 10348522
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactatagggg- 182  Q
    |||||||||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||| ||  ||||||||||||||||   |||||||||||     
T  10348656 aattacacacgtggcacatattaattaataaaaaaacagacatatcagcactaaatgtcatggggactataaaatcagaaaggggaaaaactatagggga 10348557  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
    ||||||||||||||||||| |||||| ||||||||    
T  10348556 caaaatcgctcgtttaaaattatgggatgcaaaat 10348522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 10348681 - 10348813
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||||||||||| |||||||||||||       | ||||||||||||||| ||| ||| |||||| ||||||||||||  ||||||||    
T  10348681 tggaattacacacgtggcacacatgaattgataaaaaa-------accagcactaaatgtcacggggaccataaaattagaaagggggaaaactataggg 10348773  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  10348774 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 10348813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 42673178 - 42673310
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    ||||||||||||||||||||||||||||||||||||||       | || |||||||| | ||||| ||| |||||||||||||||||||  ||||||||    
T  42673178 tggaattacacacgtggcacacattaattgataaaaaa-------accaacactaaatctgatggggaccataaaatcagaaagggggaaaactataggg 42673270  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  42673271 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 42673310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 53766466 - 53766552
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg 170  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  53766466 tggaattacacacgtggcacatattaattgataaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagggg 53766552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 26007502 - 26007632
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||||||||||||||||||||||||||        ||||||||||||| ||||| ||| |||||||||||||||||  ||||||| ||    
T  26007502 tggaattacacacgtggcacacattaattgataaaaaac--------cagcactaaatgttatggggaccataaaatcagaaagggggaaaactataggg 26007593  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcg 219  Q
    ||||||||||||||||||||| ||||  |||||||||||    
T  26007594 ggcaaaatcgctcgtttaaaattatgaagtgcaaaatcg 26007632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 48160070 - 48159937
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||||||||||||||||||||||||| |   |||      |||||||||| ||| | | |||||||||||||||||||  ||||||||    
T  48160070 tggaattacacacgtggcacacattaattgataaaaaaaactaaca------ctaaatgtcacggggatcataaaatcagaaagggggaaaactataggg 48159977  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  48159976 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 48159937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 53766331 - 53766203
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa-ctatagggg 182  Q
    ||||||||||||||||||||||||||||| |||||||         |||||||||||||||||||  ||| |||||||| ||| |||||| |||||||||    
T  53766331 tggaattacacacgtggcacacattaatt-ataaaaa---------tcagcactaaatgtcatggagaccataaaatcaaaaatggggaaactatagggg 53766242  T
Q  183 -caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
     ||||||||||||||||||||||||||||||||||||||    
T  53766241 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 53766203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26007441 - 26007381
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26007441 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 26007381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 36180872 - 36181004
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    ||||||||||||||||| ||||||||||||||||||||       | ||||||||||||||||||| | | |||||||||||| ||| ||  ||||||||    
T  36180872 tggaattacacacgtggtacacattaattgataaaaaa-------accagcactaaatgtcatggggatcataaaatcagaaaagggaaaaactataggg 36180964  T
Q  182 gcaaaa-tcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | |||| ||||||||||||||||||||||| |||||||||    
T  36180965 gaaaaaatcgctcgtttaaaactatggggtacaaaatcgc 36181004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 42455945 - 42455859
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa 173  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||| ||||||| |||||||| ||| |||||||||||||||||||    
T  42455945 aattacacacgtgacacacattaattgataaaaaacagatatatcatcactaaacgtcatggggaccataaaatcagaaagggggaa 42455859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27238725 - 27238668
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaata 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27238725 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaata 27238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44008227 - 44008170
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaata 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44008227 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatccgaaaaata 44008170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 44008283 - 44008412
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||| |||||||||||||||||||||||||       | ||||| ||||||||| | | ||| ||||||||||||||| |||  ||||||||    
T  44008283 tggaattacacatgtggcacacattaattgataaaaaa-------accagcattaaatgtcacgaggaccataaaatcagaaagggagaaaactataggg 44008375  T
Q  182 gcaaaa-tcgctcgtttaaaactatggggtgcaaaat 217  Q
    | |||| | ||||||||||||||||| ||||||||||    
T  44008376 ggaaaaattgctcgtttaaaactatgaggtgcaaaat 44008412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 21895807 - 21895722
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcat-gggaaccctaaaatcagaaagggg 170  Q
    |||||||||||||| || ||||||| |||| |||||| ||||||||| ||||||||||||| ||| ||| ||||||||||||||||    
T  21895807 gaattacacacgtgacatacattaaatgatcaaaaaccgacacatcatcactaaatgtcatgggggaccataaaatcagaaagggg 21895722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 53766395 - 53766447
Alignment:
Q  9 attttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  53766395 attttaagaagaaatatcacgtgtctcgttctctcaaaatctgaaaaatacca 53766447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 21896390 - 21896525
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactataggg-g 182  Q
    ||||| ||||||||||||||||||| |||| |||||| ||||||||| |||||||| |||  || ||| |||||||| ||| |||   ||  || ||| |    
T  21896390 gaattgcacacgtggcacacattaaatgatcaaaaaccgacacatcatcactaaatatca--gggaccataaaatcaaaaatgggaaaaatgatggggtg 21896487  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  21896488 caaaatcgctcgtataaaaccatggggtgcaaaatcgc 21896525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42456019 - 42455965
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    ||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||    
T  42456019 tttttcagattttaagaa---atatcacgtgcctccttctctc-aaatctgaaaaatac 42455965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 40848760 - 40848718
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  40848760 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatacca 40848718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 47666148 - 47666115
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaata 58  Q
    ||||||||||||||||||||||||||||||||||    
T  47666148 tcacgtgcctccttctctcaaaatctgaaaaata 47666115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 27238720 - 27238760
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  27238720 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatac 27238760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 61
Target Start/End: Original strand, 3353372 - 3353403
Alignment:
Q  30 tgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||||||||||||||||||||||||||    
T  3353372 tgcctccttctctcaaaatctgaaaaatacca 3353403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 22429393 - 22429354
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  22429393 gaaaaatcacgtgc-tccttctctcaaaatctgaaaaatac 22429354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 48160131 - 48160092
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  48160131 gaaaaatcacgtgcc-ccttctctcaaaatctgaaaaatac 48160092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 2e-54; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 22754887 - 22755103
Alignment:
Q  4 ttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtggcac 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      ||||||||||||||||||||    
T  22754887 ttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccacttttttattttttaaaaaa--tggaattacacacgtggcac 22754984  T
Q  104 acattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg-gaactata-ggggcaaaatcgctcgtttaaaa 201  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  22754985 acattaattgataaaaaacagacatatcagcactaaatgtcatggggacaataaaatcagaaaggggaaaactatagggggcaaaatcgctcgtttaaaa 22755084  T
Q  202 ctatggggtgcaaaatcgc 220  Q
    ||||| |||||||||||||    
T  22755085 ctatgtggtgcaaaatcgc 22755103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 7654423 - 7654562
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||    
T  7654423 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 7654522  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  7654523 ggcaaagtcactcgtttaaaactatggggtgcaaaatcgc 7654562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 33974091 - 33974313
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||                      |||||||||||||||||    
T  33974091 tttttcagattttaagaagaaatatcacatgcctccttctctcaaaatctgaaaaatatcattttttttattttttaaaaaa-tggaattacacacgtgg 33974189  T
Q  101 cacacattaattgataaaa-aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgtt 196  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||  ||| |||||||||||||||||  ||||||| ||||||||||||||||||    
T  33974190 cacacattaattgataaaaaaacagacatatcagcactaaatgtcatggagaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtt 33974289  T
Q  197 taaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||    
T  33974290 taaaactatggggtgcaaaatcgc 33974313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 32733788 - 32734010
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||                      || |||||||||||||     
T  32733788 tttttcagattttaagaagaaatatcacgtgactccttctctcaaaatctgaaaaataccattttttttattttaaaaaaaaatgaaattacacacgtga 32733887  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    |||||||||||| |||| ||||||||| ||||||||||||| ||||||||||| ||||||||||||||| |  || |||| |||||||||||||||||||    
T  32733888 cacacattaattaataataaacagacatatcagcactaaatatcatgggaaccataaaatcagaaagggagaaaattatagggggcaaaatcgctcgttt 32733987  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    ||||||||||| |||||||||||    
T  32733988 aaaactatgggatgcaaaatcgc 32734010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 10087734 - 10087872
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| | ||| |||||||||||||||||  ||||||| ||    
T  10087734 tggaattacacacgtggcacacattaatcgataaaaaacaaacatatcagcactaaatgtcatgag-accataaaatcagaaagggggaaaactataggg 10087832  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10087833 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 10087872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 29074247 - 29074386
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| |  ||||||| ||    
T  29074247 tggaattacacacgtgacacacattaattgataaataacagacacatcagcactaaatgtcatgggaatcataaaatcagaaagggcgaaaactataggg 29074346  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    || |||||||||||||| ||||||||||||||||||||||    
T  29074347 gggaaaatcgctcgttttaaactatggggtgcaaaatcgc 29074386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 29079011 - 29079150
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| |  ||||||| ||    
T  29079011 tggaattacacacgtgacacacattaattgataaataacagacacatcagcactaaatgtcatgggaatcataaaatcagaaagggcgaaaactataggg 29079110  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    || |||||||||||||| ||||||||||||||||||||||    
T  29079111 gggaaaatcgctcgttttaaactatggggtgcaaaatcgc 29079150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 29106820 - 29106959
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| |  ||||||| ||    
T  29106820 tggaattacacacgtgacacacattaattgataaataacagacacatcagcactaaatgtcatgggaatcataaaatcagaaagggcgaaaactataggg 29106919  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    || |||||||||||||| ||||||||||||||||||||||    
T  29106920 gggaaaatcgctcgttttaaactatggggtgcaaaatcgc 29106959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 2354587 - 2354449
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||| ||    
T  2354587 tggaattacacacgtggcacatattaattgataaataacagacacatcagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactataggg 2354488  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcg 219  Q
    || |||||||||||||| |||| ||||| ||||||||||    
T  2354487 ggaaaaatcgctcgttttaaacaatgggatgcaaaatcg 2354449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 2354691 - 2354824
Alignment:
Q  89 ttacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatca-gaaagggggaactata-ggggcaaa 186  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| ||| |||  ||||||| ||||||||    
T  2354691 ttacacacgtggcacacattaattgataaataacagacacatcagcattaaatgtcatgggaaccataaaatcatgaaggggaaaactatagggggcaaa 2354790  T
Q  187 atcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    || |||||||| |||| |||||||||||||||||    
T  2354791 atggctcgttttaaacaatggggtgcaaaatcgc 2354824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 13176798 - 13176660
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||| |||  ||||||| ||    
T  13176798 tggaattacacacgtgacacacattaattgataaaaaacagacatatcagcactaaatgtcacggggaccataaaatcagaaagtgggaaaactataggg 13176699  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcg 219  Q
    ||||||||||||| |||||||  ||||| | ||||||||    
T  13176698 ggcaaaatcgctcatttaaaatcatgggatacaaaatcg 13176660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 219
Target Start/End: Complemental strand, 32733725 - 32733598
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactatagg-ggc 183  Q
    |||||||||||||||||| ||||||||| ||||||        |||||||||||||||||||||||| ||||||||||||||||   ||||||||| |||    
T  32733725 aattacacacgtggcacatattaattgaaaaaaaa--------tcagcactaaatgtcatgggaaccataaaatcagaaaggggaaaaactataggaggc 32733634  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcg 219  Q
    ||||| ||||||||||||||||||| ||||||||||    
T  32733633 aaaattgctcgtttaaaactatgggatgcaaaatcg 32733598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 22684240 - 22684370
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||| |||||||||||||||||||||       | ||||||||||| ||||||| ||| |||||||||||||||| ||  ||||||||    
T  22684240 tggaattacacacgtgacacacattaattgataaaaaa-------accagcactaaatatcatggggaccataaaatcagaaaggggaaaaactataggg 22684332  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatc 218  Q
    | |||||||| | |||||||||||||||||||||||||    
T  22684333 ggcaaaatcgtttgtttaaaactatggggtgcaaaatc 22684370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 84 - 218
Target Start/End: Complemental strand, 22754828 - 22754698
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||| |||||||||||||||||||||       | ||||||||||| ||||||| ||| |||||||||||||||| ||  ||||||||    
T  22754828 tggaattacacacgtgacacacattaattgataaaaaa-------accagcactaaatatcatggggaccataaaatcagaaaggggaaaaactataggg 22754736  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatc 218  Q
    | |||||||| | |||||||||||||||||||||||||    
T  22754735 ggcaaaatcgtttgtttaaaactatggggtgcaaaatc 22754698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 13176947 - 13177068
Alignment:
Q  92 cacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggga--actata-ggggcaaaat 188  Q
    ||||||||||||||||||||||||||||||        |||| | ||||||||||||| ||| ||||||||||||||||||  |||||| ||||||||||    
T  13176947 cacacgtggcacacattaattgataaaaaa--------tcagtagtaaatgtcatggggaccataaaatcagaaagggggacaactataaggggcaaaat 13177038  T
Q  189 cgctcgtttaaaactatggggtgcaaaatc 218  Q
    |||||||||||||||||| |||| ||||||    
T  13177039 cgctcgtttaaaactatgaggtgtaaaatc 13177068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 22684181 - 22684124
Alignment:
Q  4 ttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22684181 ttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 22684124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 205
Target Start/End: Complemental strand, 33974033 - 33973919
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaactatagggg- 182  Q
    |||||||||||||||||| ||||||||||||||||||||        || |||||||||||||||| ||| |||||| |||||||   |||||||||||     
T  33974033 tggaattacacacgtggcgcacattaattgataaaaaac--------caacactaaatgtcatggggaccataaaattagaaaggaaaaactatagggga 33973942  T
Q  183 caaaatcgctcgtttaaaactat 205  Q
    ||||||||||||| |||||||||    
T  33973941 caaaatcgctcgtgtaaaactat 33973919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13176880 - 13176826
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaa 55  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13176880 tttttcagatttgaagaagaaatatcgcgtgcctccttctctcaaaatctgaaaa 13176826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 33974096 - 33974056
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  33974096 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatac 33974056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 32733793 - 32733754
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaata 58  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  32733793 gaaaaatcacgtgcccccttctctcaaaatctgaaaaata 32733754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 10087671 - 10087713
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||||||||| |||||||||||||| ||||||||||||    
T  10087671 gaaaaatcacgtgcccccttctctcaaaatttgaaaaatacca 10087713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 13176875 - 13176917
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| ||||| |||| |||||||||||||||||||||||||||    
T  13176875 gaaaaatcacatgcccccttctctcaaaatctgaaaaatacca 13176917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 33829068 - 33829030
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  33829068 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 33829030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 33829612 - 33829650
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  33829612 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 33829650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 8e-54; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 25162106 - 25162325
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||                      |||||||||||||||||    
T  25162106 tttttccgattttaagaagaaatatcacgtgcatccttctctcaaaatctgaaaaataccatttttttatttttttaaaaaa-tggaattacacacgtgg 25162204  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||  ||||||| |||||||||||||||||||    
T  25162205 cacacattaattgataaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttt 25162304  T
Q  198 aaaactatggggtgcaaaatc 218  Q
    |||||||||| ||||||||||    
T  25162305 aaaactatggagtgcaaaatc 25162325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 169317 - 169453
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||  ||||||| |||||    
T  169317 aattacacacgtggcacacattaattgataaaaaacagacacatcaacactaaatgtcatggggaccataaaatcaaaaagggggaaaactatagggggc 169416  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  169417 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 169453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 293043 - 292825
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      |||||||||||||||||    
T  293043 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttttatttttaaaaaaa-tggaattacacacgtgg 292945  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||  |||| || |||||||||||||||||||    
T  292944 cacacattaattaataaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactgtagggggcaaaatcgctcgttt 292845  T
Q  198 aaaactatggggtgcaaaat 217  Q
    ||||||||| | ||||||||    
T  292844 aaaactatgagatgcaaaat 292825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 87 - 220
Target Start/End: Complemental strand, 28196522 - 28196386
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||  ||||||| |||||    
T  28196522 aattacacacgtggcacatattaattgataaaaaacagacacatcagcattaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggc 28196423  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  28196422 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 28196386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 28196647 - 28196787
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaa-aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||  ||||||| |    
T  28196647 tggaattacacacgtggcacacattaattgataaaaaaacagacacatcatcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagg 28196746  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28196747 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 28196787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 9023505 - 9023284
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||                      || ||||||||||||||    
T  9023505 tttttcaaattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttttattttttaaaaaa-tgaaattacacacgtgg 9023407  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||| ||||||||  ||||||| ||||||||||| |||||||    
T  9023406 cacacattaattgataaaaaacagacatatcagcattaaatgtcatggggaccataaaatcataaagggggaaaactatagggggcaaaatcactcgttt 9023307  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  9023306 aaaactatggggtgcaaaatcgc 9023284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 9380568 - 9380347
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaa-ataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||                      ||||||||||||||||    
T  9380568 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaaataccatttttttattttttaaaaaa--tggaattacacacgtg 9380471  T
Q  100 gcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgtt 196  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||| | ||| |||||||||||||||||  ||||||| ||||||||||||||||||    
T  9380470 gcacacattaattgataaaaaacagacatatcaatactaaatgtcatgaggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtt 9380371  T
Q  197 taaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||| ||||||||||    
T  9380370 taaaactatggggggcaaaatcgc 9380347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 23540018 - 23539879
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaactata---gg 180  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||   ||    
T  23540018 tggaattacacacgtggcacacattaattgataaataatagacacatcagcactaaatgtcatgggaaccataaaatcagaaaggaggaaaaatataggg 23539919  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  23539918 ggcaaaatcgttcgttttaaactatggggtgcaaaatcgc 23539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 87 - 220
Target Start/End: Complemental strand, 32703401 - 32703265
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||||||||||||  ||||||| |||||    
T  32703401 aattacacacgtggcacacattaattgataaaaaacagacacatcagcattaaatgtcacggggaccataaaatcagaaagggggaaaactatagggggc 32703302  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  32703301 aaaatcgctcgtttaaaactacggggtgcataatcgc 32703265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 32703524 - 32703664
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaa-aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||| ||||  ||||||| |    
T  32703524 tggaattacacatgtggcacacattaattgataaaaaaacagacacatcatcactaaatgtcatggggaccataaaatcagaaaaggggaaaactatagg 32703623  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32703624 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 32703664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 39744339 - 39744479
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaa-aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| |||  ||||||||||||||||  ||||||| |    
T  39744339 tggaattacacacgtgacacacattaattgataaaaaaacagacatatcagcactaaatgtcatggggaccacaaaatcagaaagggggaaaactatagg 39744438  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39744439 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 39744479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 23540127 - 23540266
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||    
T  23540127 tggaattacacacgtgacacacattaattaataaaaaacacacacatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 23540226  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    || |||||||||||||||||||||| ||||||||||||||    
T  23540227 ggtaaaatcgctcgtttaaaactatagggtgcaaaatcgc 23540266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 48406141 - 48406004
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||| |||| ||||||||||||  || |||| |    
T  48406141 tggaattacacacgtggcacacattaattgataaaaaaacagacacatcatcactaaatgtcatggggaccataaagtcagaaagggggaaaattatagg 48406042  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48406041 gggcaaaatcgctcgtttaaaactatggggtgcaaaat 48406004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 87 - 220
Target Start/End: Complemental strand, 26207536 - 26207400
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||| ||  ||||||| |||||    
T  26207536 aattacacacgtggcacacattaattgataaataacaaacacatcagcattaaatgtcatgggaaccataaaatcagaaaggaggaaaactatagggggc 26207437  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||| |||| |||||||||||||||||    
T  26207436 aaaatcgctcgttttaaacaatggggtgcaaaatcgc 26207400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 48406263 - 48406399
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactata-ggggc 183  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||| ||||||||||||||||   ||||||| |||||    
T  48406263 aattatacacgtggcacacattaattgataaaaaacagacacataagcattaaatgtcatggggaccataaaatcagaaaggggaaaaactatagggggc 48406362  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||| ||||||||||||||    
T  48406363 aaaatcgctcgtttaaaactatagggtgcaaaatcgc 48406399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 169194 - 169054
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactata-g 179  Q
    |||||||||||||||| | ||||||||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||||||||   ||||||| |    
T  169194 tggaattacacacgtgactcacattaattgataaaaaaacagacacatcaacactaaatgtcatggggaccataaaatcagaaaggggaaaaactatagg 169095  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  169094 gggcaaaatcgctcgtttaaaattatggggtgcaaaatcgc 169054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 39086496 - 39086637
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaa--aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata- 178  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||   ||| |||||||||||||||||  |||||||     
T  39086496 tggaattacacacgtagcacacattaattgataaaaaaaacagacacatcagcactaaatgtcatgcagaccataaaatcagaaagggggaaaactatag 39086595  T
Q  179 ggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  39086596 ggggcaaaatcgctcgtttaaaactattaggtgcaaaatcgc 39086637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 43292237 - 43292371
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg-gaactata-ggggca 184  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || | | ||||||||||||||||  ||||||| ||||||    
T  43292237 aattacacacgtggcacacattaattgataaaaaacagacatatcaacactaaatgtcattggga-cataaaatcagaaaggggaaaactatagggggca 43292335  T
Q  185 aaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||| |||||||||||    
T  43292336 aaatcgctcgtttaaaactatgggatgcaaaatcgc 43292371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 12758028 - 12757806
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      ||||||||||||||||     
T  12758028 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttttatttttataaaaa-tggaattacacacgtgc 12757930  T
Q  101 cacacattaattgataaaaaacag-acacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg-caaaatcgctcgtt 196  Q
    ||||||||||||||||||||| |  | | ||||||||||||| ||||||| ||| ||||||||||||| || ||  ||||||||| ||||||||||||||    
T  12757929 cacacattaattgataaaaaaaaacagatatcagcactaaatatcatggggaccataaaatcagaaagaggaaaaactataggggacaaaatcgctcgtt 12757830  T
Q  197 taaaactatggggtgcaaaatcgc 220  Q
    |||||||||| | |||||||||||    
T  12757829 taaaactatgagatgcaaaatcgc 12757806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 39912365 - 39912501
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactatagg-ggc 183  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||  |||||||| ||||| |   ||||||||| |||    
T  39912365 aattacacacgtggcacacattaattgataaaaaacggacatatcagcactaaatgtcatggggactataaaatcataaaggcgaaaaactataggtggc 39912464  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||| |||||||||||||||||| |||||||||||    
T  39912465 aaaatcactcgtttaaaactatgggatgcaaaatcgc 39912501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 25162050 - 25161918
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||| |||||||||||||||||||||       | ||||||||||||||||||| ||| || ||||||||||||||||  ||||||||    
T  25162050 tggaattacacacgtgacacacattaattgataaaaaa-------accagcactaaatgtcatggggaccatacaatcagaaagggggaaaactataggg 25161958  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  25161957 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 25161918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 9380624 - 9380755
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||| ||||||||||||||| ||||||||||        ||||||||||||||||||| ||| |||||||||||||||||||  ||||||||    
T  9380624 tggaattacacaagtggcacacattaatggataaaaaac--------cagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 9380715  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||| ||||||||||||    
T  9380716 ggcaaaatcgctcgtttaaaactatggagtgcaaaatcgc 9380755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 105 - 220
Target Start/End: Original strand, 26207642 - 26207760
Alignment:
Q  105 cattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgtttaaaa 201  Q
    |||||||||||||| ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||  ||||||| ||||||||||||||||||| |||    
T  26207642 cattaattgataaataacagacacatcaacactaaatatcatgggaaccataaaatcagaaaggaggaaaactatagggggcaaaatcgctcgttttaaa 26207741  T
Q  202 ctatggggtgcaaaatcgc 220  Q
    | |||||||||||||||||    
T  26207742 caatggggtgcaaaatcgc 26207760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 293099 - 293231
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctata-gg 180  Q
    |||||||||||| |||||||||||||||||||||||||       | ||||||||||| |||||||  || |||||||||||||||||||  ||||| ||    
T  293099 tggaattacacatgtggcacacattaattgataaaaaa-------accagcactaaatttcatgggggccataaaatcagaaagggggaaaactatacgg 293191  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  293192 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 293231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 4239273 - 4239380
Alignment:
Q  116 aaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaactata---ggggcaaaatcgctcgtttaaaactatggggtgc 212  Q
    |||||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||  |||   ||||||||||||||||||||||||||||||||||    
T  4239273 aaaaaacagacatatcaacactaaatgtcatggggaccataaaatcagaaagggggaaaaatatagggggcaaaatcgctcgtttaaaactatggggtgc 4239372  T
Q  213 aaaatcgc 220  Q
    ||||||||    
T  4239373 aaaatcgc 4239380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 9023562 - 9023694
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    ||||||||||||||||||||| ||||||||||||||||       | || |||||||| | ||||| ||| |||||||||||||||||||  ||||||||    
T  9023562 tggaattacacacgtggcacatattaattgataaaaaa-------accaacactaaatctgatggggaccataaaatcagaaagggggaaaactataggg 9023654  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||| ||||||||||||||||||||||||||    
T  9023655 ggcaaaatcgctcatttaaaactatggggtgcaaaatcgc 9023694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 216
Target Start/End: Original strand, 12758086 - 12758214
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    ||||||||||||||||||||||||||||||||||||||       |  ||||||||||||||| || ||| |||||||||||||||||  ||||||| ||    
T  12758086 tggaattacacacgtggcacacattaattgataaaaaa-------actagcactaaatgtcatagggaccataaaatcagaaagggggaaaactataggg 12758178  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaa 216  Q
    |||||||| |||||||||||||||||| ||||||||    
T  12758179 ggcaaaattgctcgtttaaaactatggcgtgcaaaa 12758214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 39744199 - 39744070
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg- 182  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||  ||| ||| ||| |||||||||||||||||||  |||||||||     
T  39744199 gaattacacacgtggcacacattaattgataaaaaac--------cagcactaaacatcacggggaccataaaatcagaaagggggaaaactataggggg 39744108  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  39744107 caaaatcgctcgtttaaaattatggggtggaaaatcgc 39744070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 39912220 - 39912106
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggggca 184  Q
    ||||||||||||||||||||||||||||||||||||        || |||||||| | ||||| ||| |||||||||||||||||||  |||||||||||    
T  39912220 aattacacacgtggcacacattaattgataaaaaac--------caacactaaatctgatggggaccataaaatcagaaagggggaaaactataggggca 39912129  T
Q  185 aaatcgctcgtttaaaactatgg 207  Q
    |||||| ||||||||||||||||    
T  39912128 aaatcgttcgtttaaaactatgg 39912106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39912281 - 39912341
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39912281 tttttcaaattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 39912341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 43292168 - 43292077
Alignment:
Q  132 agcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||| | ||| |||||||||||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43292168 agcactaaatgtcatgaggaccataaaatcagaaaggggaaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 43292077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39744259 - 39744312
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaa 54  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39744259 tttttcatattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaa 39744312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 44468849 - 44468937
Alignment:
Q  134 cactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||| |  |||||||||||||| ||||  ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  44468849 cactaaatgtcatgggatca-taaaatcagaaaggaggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgc 44468937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 169255 - 169291
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||    
T  169255 tcacgtgcctccttctctcaaaatctgaaaaatacca 169291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 28196585 - 28196549
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||    
T  28196585 tcacgtgcctccttctctcaaaatctgaaaaatacca 28196549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 32703462 - 32703426
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||    
T  32703462 tcacgtgcctccttctctcaaaatctgaaaaatacca 32703426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 39086433 - 39086398
Alignment:
Q  26 cacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  39086433 cacgtgcctccttctctcaaaatctgaaaaatacca 39086398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 43292169 - 43292212
Alignment:
Q  18 agaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||| | |||||||||||||||||||||||||    
T  43292169 agaaatatcacgtgccccattctctcaaaatctgaaaaatacca 43292212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 9023500 - 9023542
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  9023500 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatacca 9023542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 12758023 - 12758065
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  12758023 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatacca 12758065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 39912286 - 39912244
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  39912286 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatacca 39912244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 48406202 - 48406236
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||||||||||||||||||||||||||||||||||    
T  48406202 tcacgtgcctccttctctcaaaatctgaaaaatac 48406236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 293038 - 293079
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  293038 gaaaaatcacgtgc-tccttctctcaaaatctgaaaaatacca 293079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 9380563 - 9380604
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  9380563 gaaaaatcacgtgc-tccttctctcaaaatctgaaaaatacca 9380604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 25162111 - 25162070
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  25162111 gaaaaatcacgtgc-tccttctctcaaaatctgaaaaatacca 25162070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 36095895 - 36095857
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  36095895 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 36095857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 36096451 - 36096489
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  36096451 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 36096489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 50678857 - 50678819
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  50678857 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 50678819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 50679400 - 50679437
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcg 219  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  50679400 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcg 50679437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 43051228 - 43051264
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatc 218  Q
    ||||||||||||||||||||  |||||||||||||||    
T  43051228 gcaaaatcgctcgtttaaaaacatggggtgcaaaatc 43051264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 8e-51; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 24473646 - 24473782
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactatagggg-c 183  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||| |    
T  24473646 aattacacacatggcacacattaattgataaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggggac 24473745  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  24473746 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 24473782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 37396891 - 37396748
Alignment:
Q  84 tggaattacacacgtggcacacattaatt----gataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactat 177  Q
    |||||||||||||||||||||||||||||    ||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||  ||||||    
T  37396891 tggaattacacacgtggcacacattaattaattgataaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactat 37396792  T
Q  178 a-ggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||||||    
T  37396791 agggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 37396748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 34498430 - 34498569
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaactata---gg 180  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||  |||   ||    
T  34498430 tggaattacacacgtggcacacattaattgataaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaaatataggg 34498529  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||| |||| || |||||||||||||||||||||||||||    
T  34498530 ggcataatctcttgtttaaaactatggggtgcaaaatcgc 34498569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 41662701 - 41662561
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| |||||||| |  ||||||| |    
T  41662701 tggaattacacacgtggcacacattaattgataaaaaaacaaacacatcagcactaaatgtcatgggaaccataaaattagaaagggagaaaactatagg 41662602  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  41662601 gggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgc 41662561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 84 - 218
Target Start/End: Complemental strand, 24473522 - 24473385
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| ||| |||||||||||||||||  ||||||| ||    
T  24473522 tggaattacacacgtggcacacgttaattgataaaaaacagacacgtcatcactaaatgtcatggggaccataaaatcagaaaggggggaaactataggg 24473423  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatc 218  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  24473422 ggcaaaatcgctcatttaaaattatggggtgcaaaatc 24473385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 84 - 205
Target Start/End: Original strand, 16169482 - 16169606
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg--gaactata-gg 180  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||   ||||||| ||    
T  16169482 tggaattacacacgtgacacacattaattgataaaaaacagacatatcagcactaaatgtcatgggaaccataaaatcagaaaggggaaaaactataggg 16169581  T
Q  181 ggcaaaatcgctcgtttaaaactat 205  Q
    |||||||||||||||||||||||||    
T  16169582 ggcaaaatcgctcgtttaaaactat 16169606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 6198970 - 6199110
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaa-aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||||||| | | |||||||||||||||||  ||||||| |    
T  6198970 tggaattacacatgtggcacacattaattgataaaaaaacagacatttcagcactaaatgtcatggggatcataaaatcagaaagggggaaaactatagg 6199069  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  6199070 gggcaaaatcgctcgtttaaaactatgggatgcaaaatcgc 6199110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 34498291 - 34498162
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa-ctataggg- 181  Q
    |||||||||||||||||||||||||||||||||||||         |||||||||||||||||||| ||| ||||||||||||||||||| ||||||||     
T  34498291 tggaattacacacgtggcacacattaattgataaaaa---------tcagcactaaatgtcatggggaccataaaatcagaaagggggaaactatagggt 34498201  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34498200 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 34498162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 87 - 220
Target Start/End: Complemental strand, 9623678 - 9623542
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcag--aaagggggaactata-ggggc 183  Q
    ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||  ||||||  ||||||| |||||    
T  9623678 aattacacacgtgacacatattaattgataaaaaacagacatatcagcactaaatgtcaaggggaccataaaatcagaaaaagggaaaactatagggggc 9623579  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||| |||||||||||||||||||||||||||||||    
T  9623578 aaaattgctcgtttaaaactatggggtgcaaaatcgc 9623542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 15444387 - 15444264
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactataggg-gc 183  Q
    |||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||  ||| |||||||| ||||||||  |||||||||| ||    
T  15444387 aattacacacgtggcacatattaattgataaaaaacagagatatcagcactaaatgtcatggagaccataaaatcataaagggggaaaactatagggagc 15444288  T
Q  184 aaaatcgctcgtttaaaactatgg 207  Q
    ||||||||||||||||||||||||    
T  15444287 aaaatcgctcgtttaaaactatgg 15444264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 37397028 - 37397159
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctata-gg 180  Q
    |||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||| |||||||||||||||||||  ||||| ||    
T  37397028 tggaattacacacgtggcacacattaattgataaaaaac--------cagcactaaatgtcatggggaccataaaatcagaaagggggaaatctataggg 37397119  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  37397120 ggcaaagtcgctcgtttaaaactatggggggcaaaatcgc 37397159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 6198830 - 6198698
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    ||||||||||||||||||||||||||||||||||||||       | ||||||||||||||||||| ||| |||||||||||| ||||||  ||||||||    
T  6198830 tggaattacacacgtggcacacattaattgataaaaaa-------accagcactaaatgtcatggggaccataaaatcagaaatggggaaaactataggg 6198738  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||| ||||||||||||||    
T  6198737 ggcaaaatcgctcgtttaaaactatagggtgcaaaatcgc 6198698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 33726986 - 33727119
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||||||||||||||||||||||||| |       ||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||    
T  33726986 tggaattacacacgtggcacacattaattgataaaaaaaac------cagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 33727079  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  33727080 ggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgc 33727119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 191
Target Start/End: Complemental strand, 33726844 - 33726734
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactatagg- 180  Q
    |||||||||||| ||| |||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||  |||||||||     
T  33726844 tggaattacacatgtgacacacatttattgataaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagga 33726745  T
Q  181 ggcaaaatcgc 191  Q
    |||||||||||    
T  33726744 ggcaaaatcgc 33726734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 20861519 - 20861652
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaac--tatagg- 180  Q
    ||||||||||||||||| ||||| |||||||||||||| |        |||||||||||||||||| ||| |||||||||||||||||||   ||||||     
T  20861519 tggaattacacacgtggtacacaataattgataaaaaaaact------agcactaaatgtcatggggaccataaaatcagaaagggggaaaattatagga 20861612  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20861613 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 20861652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 15444531 - 15444661
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggggc 183  Q
    |||| |||||||||||||| ||||||||||||||||       | ||||||||||||||||||| ||| ||||||||||||| |||||  |||||||||     
T  15444531 gaatcacacacgtggcacatattaattgataaaaaa-------accagcactaaatgtcatggggaccataaaatcagaaagagggaaaactatagggga 15444623  T
Q  184 -aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
     |||||||||||||||||||||||||||||||||||||    
T  15444624 taaaatcgctcgtttaaaactatggggtgcaaaatcgc 15444661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 25439009 - 25439140
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa-ctatag-gg 181  Q
    |||| |||||||||| ||||||||||||||||||||||       |  | |||||||||||||||| ||| |||||||| |||||||||| |||||| ||    
T  25439009 tggatttacacacgtagcacacattaattgataaaaaa-------actaacactaaatgtcatggggaccataaaatcaaaaagggggaaactatagagg 25439101  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25439102 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 25439140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 6198886 - 6198946
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6198886 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 6198946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 17431456 - 17431327
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||||||||||   ||||||||||||       | ||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||    
T  17431456 tggaattacacacgtggcacaca---attgataaaaaa-------accagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 17431367  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  17431366 ggcaaaatcgctcgtttaaaactatgaggtgaaaaatcgc 17431327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 41662758 - 41662818
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41662758 tttttcagattttaagaagaaatatcacatgcctccttctctcaaaatctgaaaaatacca 41662818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25438961 - 25438903
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25438961 tttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctgaaaaatac 25438903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16169401 - 16169458
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaata 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16169401 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatccgaaaaata 16169458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33726928 - 33726868
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  33726928 tttttcagattttaaaaagaaatatcacgcgcctccttctctcaaaatctgaaaaatacca 33726868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34498349 - 34498407
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  34498349 tttttcagattttaagaagaaatatcacgtgcctcgttctctaaaaatctgaaaaatac 34498407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15444471 - 15444411
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||    
T  15444471 tttttcagattttaagaagaaatatcactcgcatccttctctcaaaatctgaaaaatacca 15444411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 16169345 - 16169216
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||| |||||||||||||||||||||||||       | ||||| ||||||||| | | ||| ||||||||||||||| |||  ||||||||    
T  16169345 tggaattacacatgtggcacacattaattgataaaaaa-------accagcattaaatgtcacgaggaccataaaatcagaaagggagaaaactataggg 16169253  T
Q  182 gcaaaa-tcgctcgtttaaaactatggggtgcaaaat 217  Q
    | |||| | ||||||||||||||||| ||||||||||    
T  16169252 ggaaaaattgctcgtttaaaactatgaggtgcaaaat 16169216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9623762 - 9623704
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||||||||||||||||||||||||||| |||||| ||| ||||||||| |||||||||    
T  9623762 tttttcagattttaagaagaaatatcacatgcctcattcactcaaaatcagaaaaatac 9623704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37396970 - 37396913
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||| ||||||||||    
T  37396970 tttttcagattttaagaagaaatatcacgtgcctc---ctctcaaaatctaaaaaatacca 37396913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 37396965 - 37397007
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  37396965 gaaaaatcacgtgcctccttctctcaaaatctgaaaaatacca 37397007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 24473584 - 24473620
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||    
T  24473584 tcacgtgcctccttctctcaaaatctgaaaaatacca 24473620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 13936800 - 13936762
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  13936800 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgc 13936762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 9623822 - 9623859
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa 121  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9623822 tggaattacacatgtggcacacattaattgataaaaaa 9623859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 15444466 - 15444506
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  15444466 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatac 15444506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 33726923 - 33726963
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  33726923 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatac 33726963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 2856632 - 2856566
Alignment:
Q  157 aaatcagaaagggggaa--ctataggggc-aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||  |||||||||  |||||||  ||||| ||||||||||||||||||||||    
T  2856632 aaatcagaaagggggaaaactataggggataaaatcgaacgttttaaactatggggtgcaaaatcgc 2856566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 9623757 - 9623799
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||| ||||| |||||||||||||||||||||||||||    
T  9623757 gaaaaatcatgtgcccccttctctcaaaatctgaaaaatacca 9623799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 9822826 - 9822788
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  9822826 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 9822788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 9823337 - 9823375
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  9823337 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 9823375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 13027257 - 13027295
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  13027257 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 13027295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 15043660 - 15043722
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatggg 149  Q
    |||||||||||||||||||||||| | || ||||||||| |||| | ||||||| || |||||    
T  15043660 aattacacacgtggcacacattaaataatcaaaaacagatacattatcactaaaagttatggg 15043722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 17431514 - 17431544
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtg 31  Q
    |||||||||||||||||||||||||||||||    
T  17431514 tttttcagattttaagaagaaatatcacgtg 17431544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 39724024 - 39724062
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  39724024 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 39724062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 17431519 - 17431479
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||| |||| ||||| |||||||||||||||||||||||||    
T  17431519 gaaaaatcatgtgcccccttctctcaaaatctgaaaaatac 17431479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 34498341 - 34498313
Alignment:
Q  33 ctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||    
T  34498341 ctccttctctcaaaatctgaaaaatacca 34498313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 8e-51; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 19514706 - 19514566
Alignment:
Q  84 tggaattacacacgtggcacacattaattgata-aaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||  ||||||| |    
T  19514706 tggaattacacacgtggcacacattaattgatacaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagg 19514607  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19514606 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 19514566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 87 - 219
Target Start/End: Original strand, 3888540 - 3888675
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||  ||||||| |||||    
T  3888540 aattacacatgtggcacacattaattgataaaaaacagacacatcagcattaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggc 3888639  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcg 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  3888640 aaaatcgctcgtttaaaactatggggtgcaaaatcg 3888675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 22729233 - 22729454
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||                      ||||||||||||||||     
T  22729233 tttttcggattttaagaagaaatatcacatgcctccttctctcaaaatctgaaaaataccattttttttattttttaaaaaa-tggaattacacacgtga 22729331  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| || ||| |||||||||||||||||  ||||||| |||||||||||||||||||    
T  22729332 cacacattaattgataaaaaacagacatatcaacactaaatgtcatagggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttt 22729431  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  22729432 aaaactatggggtgcaaaatcgc 22729454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 26570959 - 26571178
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||                      ||||||||||||||||     
T  26570959 tttttcagattttaagaagaaatatcacgtgcctcattctctcaaaatctgaaaaataccatttttttattttttaaaaaa--tggaattacacacgtga 26571056  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg-caaaatcgctcgttt 197  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||||||| ||||  ||||||||| |||||||||||||||    
T  26571057 cacacattaattgataaaaa-cagacatatcagcactaaatgtcatggggaccataaaatcagaaaggaggaaaactatagggggcaaaatcgctcgttt 26571155  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  26571156 aaaactatggggtgcaaaatcgc 26571178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 3888418 - 3888280
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagg 180  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||  |||||||    
T  3888418 tggaattacacacgtggcacacattaattgataaaaaaacagacacatcatcactaaatgtcatggga-ccataaaatcagaaagggggaaaactatagg 3888320  T
Q  181 gg-caaaatcgctcgtttaaaactatggggtgcaaaatcg 219  Q
    || |||||||||||||||||||||||||||||||||||||    
T  3888319 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcg 3888280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 41072089 - 41072227
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||  ||||||| ||    
T  41072089 tggaattacacacgtgacacacattaatcgataaaaaacagacacatcagcactaaatgtcatggggaccataaaattagaaagggggaaaactataggg 41072188  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcg 219  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  41072189 ggcaaaatcgctcgtttaaaactatagggtgcaaaatcg 41072227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 12498803 - 12498942
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaa---aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||| ||    
T  12498803 aattacacacgtggcacacattaattgataaaaaaaaacagacacatcagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 12498902  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  12498903 ggcaaaatcgcttgtttaaaactatggggtgcaaaatcgc 12498942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 12498736 - 12498607
Alignment:
Q  94 cacgtggcacacattaattgataaaaa-acagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg-caaaatc 189  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||  ||||||||| |||||||    
T  12498736 cacgtggcacacattaattgataaaaagacagacacatcagcactaaatgtcatgg-aaccataaaatcagaaagggggaaaactatagggggcaaaatc 12498638  T
Q  190 gctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||    
T  12498637 gctcgtttaaaactatggggtgcaaaatcgc 12498607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 34147319 - 34147179
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-g 179  Q
    |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||| |||||||||||||||||  ||||||| |    
T  34147319 tggaattacacacgtgacacacattaattgataaaaaaacagatacatcagcactaaatgtcacggggaccataaaatcagaaagggggaaaactatagg 34147220  T
Q  180 gggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  34147219 gggcaaaatcgctcgtttaaaactacggggtgcaaaatcgc 34147179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 2817328 - 2817189
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg-gaactata-gg 180  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||||||||  || |||| ||    
T  2817328 tggaattacacacgtggcacacattaattgataaaaaaacagacacatcaacactaaatgtcatggggaccataaaatcagaaaggggaaaaatataggg 2817229  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  2817228 ggcaaaatcgctcgtttaaaattatgggatgcaaaatcgc 2817189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 37780628 - 37780756
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa-ctatagggg 182  Q
    |||||||||||||||||||||||||||||||||||||         |||||||||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  37780628 tggaattacacacgtggcacacattaattgataaaaa---------tcagcactaaatgtcatggggaccataaaatcagaaagggggaaactatagggg 37780718  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  37780719 caaaatcgctcgtttaaaacaatgaggtgcaaaatcgc 37780756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 43464075 - 43464206
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||| |||||||||||||||||||  ||||||||    
T  43464075 tggaattacacacgtggcacacattaattgataaaaaac--------cagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggg 43464166  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | |||||||||||||||||||||||| |||||||||||||    
T  43464167 ggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgc 43464206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 37610453 - 37610243
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||                      ||||||||||||||||     
T  37610453 tttttaagattttaagaagaaatatcacgtgcctccttctctcaaaatcagaaaaataccatttttttttaaaaaaaaaaaaatggaattacacacgtga 37610354  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaactat-aggggcaaaatcgctcgtttaa 199  Q
    ||||||||||||||||||||||||||| |||| |||||||||| ||||| ||        || ||||||  |||||| ||||||||||||||||||||||    
T  37610353 cacacattaattgataaaaaacagacatatcaacactaaatgttatggggac--------cataaagggaaaactataaggggcaaaatcgctcgtttaa 37610262  T
Q  200 aactatggggtgcaaaatc 218  Q
    |||||||||||||||||||    
T  37610261 aactatggggtgcaaaatc 37610243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 2817451 - 2817589
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaag-ggggaactataggg- 181  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| ||| |||||| |||| | ||| || |||||||     
T  2817451 tggaattacacacgtggcacacattaattgatgaaaaacaaacacatcagtactaaatgtcatggggaccataaaattagaaggagggaaattataggga 2817550  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||| || || ||||||||    
T  2817551 gcaaaatcgctcgtttaaaactattggatgtaaaatcgc 2817589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 21207398 - 21207266
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggg 181  Q
    |||||||||||||||| |||||||||||||||||||||       | ||||||||||||||||||| ||| ||||||||||||||| |||  ||||||||    
T  21207398 tggaattacacacgtgacacacattaattgataaaaaa-------accagcactaaatgtcatggggaccataaaatcagaaagggtgaaaactataggg 21207306  T
Q  182 g-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  21207305 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 21207266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 220
Target Start/End: Complemental strand, 26570897 - 26570769
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg-c 183  Q
    ||||||| ||||||||||||||||||||||||||||        |||| |||||||||||||| ||| |||||||||||||||||||  ||||||||| |    
T  26570897 aattacaaacgtggcacacattaattgataaaaaac--------cagcgctaaatgtcatggggaccataaaatcagaaagggggaaaactataggggac 26570806  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||||||||||||||    
T  26570805 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 26570769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 34147390 - 34147524
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaa-cagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg- 182  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||   |||||||||| ||| ||| |||||||||||||||||||  |||||||||     
T  34147390 aattacacacgtgacacacattaattgataaaaaaacagacacatca---ctaaatgtcacggggaccataaaatcagaaagggggaaaactataggggg 34147486  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||| | |||||||||||||    
T  34147487 caaaatcgctcgtttaaaactacgaggtgcaaaatcgc 34147524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 19514848 - 19514977
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggc 183  Q
    ||||||||||||| |||||||||||||||||||||       | ||||||||||||||||||||||| |||||||||||||||||  ||||||| |||||    
T  19514848 aattacacacgtgtcacacattaattgataaaaaa-------accagcactaaatgtcatgggaaccataaaatcagaaagggggaaaactatagggggc 19514940  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||  ||||||||||||||||||||||||||||||    
T  19514941 aaaataactcgtttaaaactatggggtgcaaaatcgc 19514977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 10098684 - 10098559
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaactataggggc 183  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |||||||||||||           |||||    
T  10098684 tggaattacacacgtgacacacattaattgataaaaaacagacatatcatcactaaatgtcatggggaccataaaatcagaaag-----------ggggc 10098596  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||| || |||||||||||    
T  10098595 aaaatcgctcgtttaaaactataggatgcaaaatcgc 10098559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 22729174 - 22729047
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggggc 183  Q
    ||||||||||||| ||||||||||||||||||||| |||         |||||||||||||||| ||| |||||||||||||||||||  ||||||||||    
T  22729174 gaattacacacgtagcacacattaattgataaaaaccag---------cactaaatgtcatggggaccataaaatcagaaagggggaaaactataggggc 22729084  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||  ||||||||||||    
T  22729083 aaaatcgctcgtttaaaactatgaagtgcaaaatcgc 22729047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 25940757 - 25940955
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||                      ||||||||||||||||     
T  25940757 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctaaaaaataccattttttttattttttaaaaaa-tggaattacacacgtga 25940855  T
Q  101 cacacattaattgat-aaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgtt 196  Q
    ||||||||||||||| |||||||| ||| |||||||||| || ||||||| ||| |||||||||||||||||  ||||||| ||||||||||||||||||    
T  25940856 cacacattaattgataaaaaaacaaacatatcagcactatatatcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtt 25940955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 10098743 - 10098955
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||                      |||||||| |||||||     
T  10098743 tttttcagattttaagaagaaatatcacgtgtctcattctctcaaaatctgaaaaataccatttttttattttttaaaaaa--tggaattatacacgtga 10098840  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctataggggc-aaaatcgctcgttt 197  Q
    |||||||||||||||||||||        |||| ||||||||||||||| ||| ||||||||||||| |||||  |||||||||  ||||||||||||||    
T  10098841 cacacattaattgataaaaaa--------tcagtactaaatgtcatggggaccataaaatcagaaagagggaaaactataggggataaaatcgctcgttt 10098932  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  10098933 aaaactatggggtgcaaaatcgc 10098955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 37610503 - 37610632
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa-ctatagggg 182  Q
    ||||||||||||||||||||||||||||||||||||| ||          |||||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  37610503 tggaattacacacgtggcacacattaattgataaaaaccaa---------cactaaatgtcatggggaccataaaatcagaaagggggaaactatagggg 37610593  T
Q  183 -caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
     |||||||||||||||||||| ||| |||||||||||||    
T  37610594 gcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgc 37610632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 11316860 - 11316988
Alignment:
Q  87 aattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagggg-c 183  Q
    |||||||||||||||| |||||||||||||||||||        ||||||||||||||||||| ||| ||||||||||||| |||||  ||||||||| |    
T  11316860 aattacacacgtggcagacattaattgataaaaaac--------cagcactaaatgtcatggggaccataaaatcagaaagagggaaaactatagggggc 11316951  T
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||| |||||||| |||||||||||||||||    
T  11316952 aaaatcgctcatttaaaacaatggggtgcaaaatcgc 11316988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21207455 - 21207515
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21207455 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 21207515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 43464019 - 43463959
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43464019 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 43463959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 84 - 218
Target Start/End: Complemental strand, 37780489 - 37780361
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataa-aaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaactata-ggg 181  Q
    |||||||||||||||| ||||||||||||||||| |||||||||| |||| |||||||||| ||||| ||        || ||||||  ||||||| |||    
T  37780489 tggaattacacacgtgacacacattaattgataaaaaaacagacatatcaacactaaatgttatggggac--------cataaagggaaaactatagggg 37780398  T
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatc 218  Q
    |||||||||||||||||||||||||||||||||||||    
T  37780397 gcaaaatcgctcgtttaaaactatggggtgcaaaatc 37780361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 43463935 - 43463795
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaat---------cagaaagggggaa- 173  Q
    |||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||| ||||||         ||||||||| |||     
T  43463935 tggaattacacacgtggcacacattaattgataaaaaac--------cagcactaaatgtcatggggaccataaaataattaaaatcagaaagggagaaa 43463844  T
Q  174 -ctatagggg-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43463843 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 43463795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 30402056 - 30401925
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaact-atagggg 182  Q
    |||||||||||||||| ||||||||||||||||||||| | ||    || |||||||| ||||||| ||| |||||||| ||||||| || | |||||||    
T  30402056 tggaattacacacgtgacacacattaattgataaaaaaaaaac----caacactaaatatcatggggaccataaaatcataaaggggaaaattatagggg 30401961  T
Q  183 -caaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
     |||||||||| ||||||||||||||| ||||||||    
T  30401960 gcaaaatcgctagtttaaaactatgggatgcaaaat 30401925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19514787 - 19514729
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  19514787 tttttcagattttaagaagaaatatcacgtgtctccttctgtcaaaatctgaaaaatac 19514729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 25940697 - 25940561
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatg----ggaaccctaaaatcagaaagggggaa--ctat 177  Q
    ||||| ||||||||||||| ||||||||||||||||||       | ||| |||||||||||||    || ||| ||||||||||||||| |||  ||||    
T  25940697 tggaagtacacacgtggcatacattaattgataaaaaa-------accagtactaaatgtcatgcatggggaccataaaatcagaaagggtgaaaactat 25940605  T
Q  178 agggg-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||    
T  25940604 agggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgc 25940561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30402113 - 30402161
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatc 49  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30402113 tttttcagattttaagaaaaaatatcacgtgcctccttctctcaaaatc 30402161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 25940959 - 25941028
Alignment:
Q  155 taaaatcagaaaggggg---aactatagggg-caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||   ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  25940959 taaaatcagaaaggggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgc 25941028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37780571 - 37780514
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaata 58  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||  ||||||||    
T  37780571 tttttcagattttaagaagaaatatcacgtgtcttcttctctcaaaattagaaaaata 37780514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 61
Target Start/End: Complemental strand, 41072026 - 41071991
Alignment:
Q  26 cacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    ||||||||||||||||||||||||||||||||||||    
T  41072026 cacgtgcctccttctctcaaaatctgaaaaatacca 41071991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 3888479 - 3888513
Alignment:
Q  25 tcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||||||||||||||||||||||||||||||||||    
T  3888479 tcacgtgcctccttctctcaaaatctgaaaaatac 3888513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 10098748 - 10098706
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  10098748 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatacca 10098706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 19514782 - 19514824
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  19514782 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatacca 19514824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 25940754 - 25940717
Alignment:
Q  24 atcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||| |||||||||||||||||||||||||||    
T  25940754 atcacgtgcccccttctctcaaaatctgaaaaatacca 25940717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 11351405 - 11351441
Alignment:
Q  184 aaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||| ||||||||||||||||||    
T  11351405 aaaatcgctcgtttaaaaatatggggtgcaaaatcgc 11351441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 217
Target Start/End: Complemental strand, 11350885 - 11350850
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
    |||||||||||||||||||| |||||||||||||||    
T  11350885 gcaaaatcgctcgtttaaaaatatggggtgcaaaat 11350850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 18817030 - 18816992
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  18817030 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 18816992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 18817587 - 18817625
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  18817587 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 18817625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 26570964 - 26570922
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||| ||||||||||||||||||||||||||||| |||    
T  26570964 gaaaaatcatgtgcctccttctctcaaaatctgaaaaatgcca 26570922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 43464014 - 43464055
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  43464014 gaaaaatcacgtgc-tccttctctcaaaatctgaaaaatacca 43464055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 22729238 - 22729199
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  22729238 gaaaaatcacgtgc-tccttctctcaaaatctgaaaaatac 22729199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 101; Significance: 3e-50; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 185068 - 185288
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||                      |||||||||| | ||||    
T  185068 tttttcagattttaagaagaaatatcacgcgcctccttctctcaaaatctgaaaaataccatttttttatttttttaaaaa--tggaattacatatgtgg 185165  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||||||| |||  ||||||| |||||||||||||||||||    
T  185166 cacacattaattgataaaaaacagacatattagcactaaatgtcatggggaccataaaatcagaaagagggaaaactatagggggcaaaatcgctcgttt 185265  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||    
T  185266 aaaactatggggtgcaaaatcgc 185288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 185011 - 184882
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa--ctatagg- 180  Q
    ||||||||||||||||| |||||| |||||||||||||       | ||||||||||||||||||| ||| |||||||||||||||||||  |||||||     
T  185011 tggaattacacacgtgggacacatgaattgataaaaaa-------accagcactaaatgtcatggggaccataaaatcagaaagggggaaaactataggt 184919  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaat 217  Q
    |||||||||||||||||||||||||||||||||||||    
T  184918 ggcaaaatcgctcgtttaaaactatggggtgcaaaat 184882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 185073 - 185031
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  185073 gaaaaatcacgtgcccccttctctcaaaatctgaaaaatacca 185031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 98; Significance: 2e-48; HSPs: 3)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 50332 - 50116
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||                      |||||||||||||||      
T  50332 tttttcagattttaagaagaaatatcacgtgtctccttctctcaaaatctgaaaaataccatttttttttattttttaaaaaatggaattacacacgt-- 50235  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggg-gaactata-ggggcaaaatcgctcgttta 198  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || ||| ||||||||||||||||  ||||| | ||||||||||||||||||||    
T  50234 cacacattaattgataaaaaacagacatatcagcactaaatgtcatagggaccataaaatcagaaaggggaaaactacagggggcaaaatcgctcgttta 50135  T
Q  199 aaactatggggtgcaaaat 217  Q
    |||||||||||||||||||    
T  50134 aaactatggggtgcaaaat 50116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 50426 - 50521
Alignment:
Q  129 atcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgtttaaaactat-ggggtgcaaaatcgc 220  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||  ||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  50426 atcagcattaaatgtcatggggaccataaaatcagaaagggggtaaactatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgc 50521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 50340 - 50368
Alignment:
Q  33 ctccttctctcaaaatctgaaaaatacca 61  Q
    |||||||||||||||||||||||||||||    
T  50340 ctccttctctcaaaatctgaaaaatacca 50368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 591 - 370
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||                      ||||||||||||||||     
T  591 tttttcatattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccattttttaattttttttttaaa-tggaattacacacgtga 493  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||| |||||||||||| ||||  ||||||| |||||||||||||||||||    
T  492 cacacattaattgataaaaaacaaacatatcagcactaaatgtcacggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgttt 393  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    ||||||||||| |||||||||||    
T  392 aaaactatgggatgcaaaatcgc 370  T

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Target: scaffold0460; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 86 - 220
Target Start/End: Original strand, 649 - 777
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaagggggaa-ctataggggca 184  Q
    |||| |||||||||||||||||||||  ||||||||       ||||||| ||||||||||||| ||| |||||||||||| | | || |||||||||||    
T  649 gaatcacacacgtggcacacattaatgcataaaaaa-------atcagcattaaatgtcatggggaccataaaatcagaaatgagaaaactataggggca 741  T
Q  185 aaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||| ||||||||||||||||||    
T  742 aaatcgctcgtttaaaattatggggtgcaaaatcgc 777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 95; Significance: 1e-46; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 86 - 220
Target Start/End: Complemental strand, 38428 - 38291
Alignment:
Q  86 gaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gggg 182  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||| |||  ||||||| ||||    
T  38428 gaattacacacgtggcacacattaattgataaaaaacagacatatcagcactaaatgtcatggggaccataaaatcagaaagagggaaaactataggggg 38329  T
Q  183 caaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  38328 caaaatcgctcatttaaaactatgggatgcaaaatcgc 38291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 38570 - 38709
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-gg 180  Q
    |||||||||||| |||||||||||||||| |||||||||| ||| ||||||||||||||||||||  ||  |||||||||||||||||  ||||||| ||    
T  38570 tggaattacacatgtggcacacattaattaataaaaaacacacatatcagcactaaatgtcatggagactataaaatcagaaagggggaaaactataggg 38669  T
Q  181 ggcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  38670 ggcaaaatcgttcgtttaagactatggggtgcaaaatcgc 38709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38489 - 38547
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatac 59  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38489 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatac 38547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 87; Significance: 7e-42; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 10167 - 9957
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |                      |||||||||||||||||    
T  10167 tttttcagatgttaagaagaaatatcacgtgcctccttctctcaaaatctaaaaaatac-aattttttttatattttaaaaaatggaattacacacgtgg 10069  T
Q  101 cacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactata-ggggcaaaatcgctcgttt 197  Q
    |||||||| |||||||||||||||||| |||| |||||||||| ||||| ||| |||||||||||||||||  ||||||| |||||||||||||||||||    
T  10068 cacacattgattgataaaaaacagacatatcaacactaaatgttatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgttt 9969  T
Q  198 aaaactatgggg 209  Q
    ||||||||||||    
T  9968 aaaactatgggg 9957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 10223 - 10332
Alignment:
Q  84 tggaattacacacgtggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactataggg 181  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||| ||||| ||| |||||||||||||||||  ||||||||||    
T  10223 tggaattacacacgtggcacacattgattgataaaaaacagacatatcaacactaaatgttatggggaccataaaatcagaaagggggaaaactataggg 10322  T
Q  182 -gcaaaatcg 190  Q
     |||||||||    
T  10323 tgcaaaatcg 10332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 10162 - 10203
Alignment:
Q  19 gaaatatcacgtgcctccttctctcaaaatctgaaaaatacca 61  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  10162 gaaaaatcacgtgc-tccttctctcaaaatctgaaaaatacca 10203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 19835 - 20057
Alignment:
Q  1 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaataccannnnnnnnnnnnnnnnnnnnnntggaattacacacgtgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |                      | |||||||||| |||     
T  19835 tttttcagattttaagaagaaatatcacgtgcctccttctctcaaaatctgaaaaatactattttttttttatttttaaaaaatagaattacacaggtga 19934  T
Q  101 cacacattaattgataaaa-aacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg-aactata-ggggcaaaatcgctcgttt 197  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||| || ||| |||||||| |||||||| ||||||| ||||||||||||   ||||    
T  19935 cacacattaattgataaaaaaacagacatatcaacactaaatgtcatagggaccataaaatcaaaaagggggaaactatagggggcaaaatcgtcagttt 20034  T
Q  198 aaaactatggggtgcaaaatcgc 220  Q
    |||||||||||| ||||||||||    
T  20035 aaaactatggggggcaaaatcgc 20057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 99 - 220
Target Start/End: Complemental strand, 19778 - 19660
Alignment:
Q  99 ggcacacattaattgataaaaaacagacacatcagcactaaatgtcatgggaaccctaaaatcagaaaggggg--aactatagggg-caaaatcgctcgt 195  Q
    ||||||||||||||||||||||| |       ||||| ||||||||||||| ||| |||||| |||||||||   ||||||||||| |||||||||||||    
T  19778 ggcacacattaattgataaaaaaaac------cagcattaaatgtcatggggaccataaaattagaaaggggagaaactatagggggcaaaatcgctcgt 19685  T
Q  196 ttaaaactatggggtgcaaaatcgc 220  Q
    |||||||||||||||||||||||||    
T  19684 ttaaaactatggggtgcaaaatcgc 19660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 6771 - 6809
Alignment:
Q  182 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgc 220  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  6771 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgc 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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