View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4405-Insertion-24 (Length: 163)
Name: NF4405-Insertion-24
Description: NF4405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4405-Insertion-24 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 136; Significance: 3e-71; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 136; E-Value: 3e-71
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 748149 - 747994
Alignment:
| Q |
8 |
ggtggctcctcccgccgctccaccgcacctctaacaccttccaccacatcaaattcctctcctaaaagcaataagaagctcatcatactgtccatcctcg |
107 |
Q |
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| T |
748149 |
ggtggctcctcccgtcgatccaccgcacctctaacaccctccaccacatcaaattcctctcctaaaagcaataagaagctcatcatgctgtccatcctcg |
748050 |
T |
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| Q |
108 |
ccgccgtcttgatcattgcttccgccatctcggctgcactgatcaccgtggtccgg |
163 |
Q |
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| T |
748049 |
ccgccgtcttgatcatcgcttccgccatctcggctgcactgatcaccgtggtccgg |
747994 |
T |
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