View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4405_high_14 (Length: 404)

Name: NF4405_high_14
Description: NF4405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4405_high_14
NF4405_high_14
[»] chr6 (23 HSPs)
chr6 (18-369)||(9046820-9047196)
chr6 (133-369)||(34248918-34249154)
chr6 (131-369)||(23663664-23663902)
chr6 (131-369)||(9696016-9696266)
chr6 (131-369)||(10397714-10397935)
chr6 (194-369)||(2941258-2941433)
chr6 (105-369)||(15528881-15529157)
chr6 (138-369)||(15122011-15122254)
chr6 (137-293)||(1781003-1781159)
chr6 (131-369)||(14938827-14939053)
chr6 (248-369)||(31188217-31188338)
chr6 (248-369)||(2836072-2836193)
chr6 (134-257)||(339311-339434)
chr6 (131-369)||(2960657-2960883)
chr6 (296-369)||(1780948-1781021)
chr6 (272-369)||(28614309-28614406)
chr6 (255-369)||(31200061-31200176)
chr6 (136-257)||(2836217-2836350)
chr6 (271-369)||(34188911-34189009)
chr6 (298-369)||(339478-339549)
chr6 (131-199)||(34188763-34188831)
chr6 (131-188)||(28614469-28614526)
chr6 (105-133)||(5582410-5582438)
[»] scaffold0618 (1 HSPs)
scaffold0618 (105-369)||(1642-1906)
[»] chr2 (33 HSPs)
chr2 (105-369)||(29257313-29257577)
chr2 (105-367)||(18299049-18299307)
chr2 (131-369)||(41114774-41115012)
chr2 (131-369)||(6799790-6800028)
chr2 (131-369)||(13203740-13203978)
chr2 (131-293)||(22572681-22572843)
chr2 (131-369)||(17148754-17149007)
chr2 (133-293)||(2475797-2475962)
chr2 (105-254)||(12000468-12000619)
chr2 (248-369)||(303996-304117)
chr2 (270-369)||(41010624-41010723)
chr2 (132-257)||(304141-304264)
chr2 (131-257)||(25562896-25563034)
chr2 (133-257)||(41010450-41010574)
chr2 (136-256)||(33909359-33909479)
chr2 (298-369)||(2475946-2476017)
chr2 (298-369)||(17249470-17249541)
chr2 (248-365)||(12000646-12000764)
chr2 (198-254)||(15651247-15651303)
chr2 (297-369)||(22572626-22572698)
chr2 (298-369)||(45444357-45444429)
chr2 (190-256)||(17249350-17249416)
chr2 (262-350)||(15651344-15651433)
chr2 (277-345)||(25563091-25563159)
chr2 (298-369)||(33909251-33909322)
chr2 (131-256)||(15429151-15429276)
chr2 (105-210)||(45444495-45444606)
chr2 (271-312)||(41010604-41010645)
chr2 (301-369)||(16220933-16221001)
chr2 (195-257)||(34756728-34756790)
chr2 (143-176)||(4570577-4570610)
chr2 (248-293)||(17249441-17249486)
chr2 (123-188)||(27702014-27702079)
[»] chr5 (50 HSPs)
chr5 (131-369)||(30248937-30249175)
chr5 (131-369)||(34443938-34444177)
chr5 (131-369)||(35468862-35469113)
chr5 (131-369)||(15675273-15675523)
chr5 (225-369)||(14832716-14832860)
chr5 (225-365)||(2476431-2476571)
chr5 (131-369)||(33006867-33007096)
chr5 (131-257)||(15503888-15504014)
chr5 (131-293)||(34846327-34846501)
chr5 (248-365)||(15504038-15504155)
chr5 (131-369)||(32953573-32953811)
chr5 (276-369)||(1672392-1672485)
chr5 (133-257)||(16667499-16667635)
chr5 (131-369)||(7161989-7162227)
chr5 (271-369)||(12267288-12267385)
chr5 (271-369)||(36234460-36234558)
chr5 (248-369)||(6900856-6900977)
chr5 (272-369)||(16567904-16568001)
chr5 (131-257)||(21068969-21069107)
chr5 (291-369)||(21069153-21069231)
chr5 (133-257)||(36234588-36234712)
chr5 (298-369)||(37552053-37552124)
chr5 (298-369)||(37654883-37654954)
chr5 (271-369)||(13942658-13942755)
chr5 (131-369)||(43228548-43228786)
chr5 (105-257)||(17192675-17192839)
chr5 (277-351)||(767416-767490)
chr5 (134-232)||(42989509-42989607)
chr5 (143-255)||(7159609-7159721)
chr5 (131-200)||(2476376-2476445)
chr5 (131-199)||(12267485-12267553)
chr5 (194-257)||(767317-767380)
chr5 (318-369)||(34846505-34846556)
chr5 (131-188)||(16567763-16567820)
chr5 (131-199)||(13694807-13694875)
chr5 (298-374)||(37779782-37779858)
chr5 (131-182)||(1672579-1672630)
chr5 (133-188)||(6900747-6900802)
chr5 (131-200)||(14832846-14832914)
chr5 (131-199)||(13695022-13695090)
chr5 (298-374)||(37607575-37607651)
chr5 (131-199)||(37779636-37779704)
chr5 (334-369)||(42989673-42989708)
chr5 (248-294)||(39605801-39605847)
chr5 (203-252)||(12267420-12267469)
chr5 (131-188)||(13942869-13942926)
chr5 (105-133)||(767234-767262)
chr5 (248-296)||(17192603-17192651)
chr5 (105-133)||(37607389-37607417)
chr5 (105-133)||(43228796-43228824)
[»] chr4 (44 HSPs)
chr4 (131-370)||(10715627-10715868)
chr4 (131-370)||(10929397-10929638)
chr4 (131-369)||(4552158-4552396)
chr4 (131-369)||(2017342-2017580)
chr4 (100-369)||(46645531-46645814)
chr4 (131-369)||(40969197-40969435)
chr4 (137-369)||(4728525-4728769)
chr4 (131-369)||(2576132-2576383)
chr4 (131-293)||(31364108-31364270)
chr4 (131-257)||(41972454-41972580)
chr4 (253-369)||(32005978-32006094)
chr4 (131-369)||(52373711-52373965)
chr4 (144-293)||(10058511-10058672)
chr4 (131-369)||(50383861-50384084)
chr4 (270-369)||(43003089-43003188)
chr4 (131-252)||(8901776-8901897)
chr4 (138-257)||(50099820-50099939)
chr4 (131-257)||(49745012-49745138)
chr4 (248-369)||(2521803-2521924)
chr4 (131-257)||(25237537-25237675)
chr4 (131-213)||(32005887-32005969)
chr4 (131-369)||(9003529-9003766)
chr4 (277-363)||(50099989-50100075)
chr4 (131-212)||(1585682-1585763)
chr4 (131-250)||(9694060-9694191)
chr4 (301-369)||(41972347-41972415)
chr4 (266-353)||(1585777-1585864)
chr4 (298-369)||(14044464-14044535)
chr4 (296-369)||(11826953-11827026)
chr4 (131-188)||(32828188-32828245)
chr4 (131-199)||(11827101-11827169)
chr4 (318-369)||(10058676-10058727)
chr4 (194-257)||(31929048-31929111)
chr4 (271-365)||(49745168-49745263)
chr4 (133-250)||(14044320-14044449)
chr4 (194-257)||(2521948-2522011)
chr4 (318-369)||(31364274-31364325)
chr4 (132-188)||(15034559-15034615)
chr4 (298-338)||(25237728-25237768)
chr4 (194-257)||(36947554-36947617)
chr4 (298-369)||(32828283-32828354)
chr4 (271-314)||(43003165-43003208)
chr4 (143-200)||(6017101-6017158)
chr4 (298-363)||(9694206-9694270)
[»] chr1 (39 HSPs)
chr1 (131-369)||(25007436-25007674)
chr1 (131-369)||(25011442-25011679)
chr1 (131-369)||(37153895-37154133)
chr1 (131-369)||(27583922-27584156)
chr1 (131-369)||(44305384-44305622)
chr1 (131-369)||(14727290-14727540)
chr1 (131-369)||(27460668-27460888)
chr1 (225-369)||(1428324-1428468)
chr1 (131-293)||(31844601-31844775)
chr1 (131-293)||(8239251-8239427)
chr1 (131-302)||(6331646-6331829)
chr1 (131-257)||(24646026-24646151)
chr1 (105-257)||(9526991-9527143)
chr1 (131-369)||(44238750-44239002)
chr1 (248-369)||(4641942-4642063)
chr1 (126-369)||(33468876-33469089)
chr1 (105-252)||(48940438-48940598)
chr1 (272-369)||(4774085-4774182)
chr1 (296-369)||(31844546-31844619)
chr1 (131-255)||(4642089-4642213)
chr1 (291-369)||(34459253-34459331)
chr1 (133-233)||(4773981-4774081)
chr1 (143-257)||(6802113-6802231)
chr1 (296-369)||(8239409-8239482)
chr1 (297-369)||(9527195-9527267)
chr1 (298-365)||(49898527-49898594)
chr1 (190-255)||(24745443-24745508)
chr1 (134-188)||(1428466-1428520)
chr1 (298-369)||(24646187-24646258)
chr1 (291-369)||(6801989-6802067)
chr1 (277-351)||(48940328-48940402)
chr1 (248-293)||(34459231-34459276)
chr1 (298-369)||(24745546-24745615)
chr1 (319-369)||(6331825-6331875)
chr1 (194-256)||(34459144-34459206)
chr1 (131-188)||(49898387-49898444)
chr1 (248-293)||(49898498-49898543)
chr1 (335-374)||(17875579-17875618)
chr1 (248-293)||(9527167-9527212)
[»] chr3 (32 HSPs)
chr3 (131-363)||(44047562-44047794)
chr3 (131-369)||(53651876-53652114)
chr3 (131-369)||(28311255-28311493)
chr3 (131-369)||(14461043-14461281)
chr3 (118-369)||(7500909-7501172)
chr3 (105-369)||(12909766-12910042)
chr3 (131-293)||(25391805-25391967)
chr3 (225-369)||(43700098-43700242)
chr3 (139-293)||(37516616-37516782)
chr3 (194-293)||(26371002-26371101)
chr3 (131-257)||(33179141-33179267)
chr3 (104-257)||(53068193-53068346)
chr3 (257-369)||(33178997-33179109)
chr3 (131-250)||(53987842-53987961)
chr3 (271-369)||(41218260-41218358)
chr3 (296-369)||(26370947-26371020)
chr3 (132-250)||(9600329-9600447)
chr3 (131-228)||(44625676-44625773)
chr3 (298-369)||(53987976-53988048)
chr3 (131-188)||(43700240-43700297)
chr3 (131-256)||(41218389-41218526)
chr3 (296-369)||(25391750-25391823)
chr3 (183-255)||(38239483-38239555)
chr3 (318-369)||(37516786-37516837)
chr3 (296-369)||(26278473-26278546)
chr3 (131-250)||(26278329-26278460)
chr3 (196-250)||(35077267-35077321)
chr3 (132-251)||(47511667-47511786)
chr3 (126-192)||(26371115-26371181)
chr3 (298-352)||(41358541-41358595)
chr3 (105-154)||(24989412-24989461)
chr3 (216-257)||(43447619-43447660)
[»] chr8 (20 HSPs)
chr8 (131-369)||(28928031-28928270)
chr8 (131-369)||(36406394-36406644)
chr8 (131-293)||(24965005-24965167)
chr8 (131-353)||(3383940-3384174)
chr8 (131-369)||(27321767-27321993)
chr8 (131-258)||(34282913-34283040)
chr8 (105-257)||(13243026-13243192)
chr8 (270-369)||(34282765-34282864)
chr8 (123-250)||(38214723-38214850)
chr8 (131-257)||(21138075-21138201)
chr8 (284-369)||(35384270-35384355)
chr8 (270-369)||(13243242-13243341)
chr8 (298-369)||(38214865-38214936)
chr8 (123-257)||(39431679-39431825)
chr8 (256-312)||(39431591-39431647)
chr8 (131-251)||(31500854-31500983)
chr8 (318-369)||(24965171-24965222)
chr8 (296-351)||(31500736-31500791)
chr8 (105-133)||(27322003-27322031)
chr8 (271-315)||(34282840-34282884)
[»] scaffold0075 (2 HSPs)
scaffold0075 (131-369)||(11497-11734)
scaffold0075 (136-369)||(6888-7120)
[»] chr7 (37 HSPs)
chr7 (131-369)||(35300333-35300583)
chr7 (190-369)||(23704374-23704553)
chr7 (103-369)||(7873125-7873389)
chr7 (131-293)||(26722919-26723093)
chr7 (131-255)||(21932798-21932921)
chr7 (298-369)||(3012461-3012532)
chr7 (131-250)||(30852315-30852434)
chr7 (131-257)||(815002-815128)
chr7 (131-258)||(41759624-41759763)
chr7 (166-255)||(21688122-21688211)
chr7 (131-369)||(5991325-5991560)
chr7 (270-369)||(21932647-21932746)
chr7 (271-369)||(4843432-4843530)
chr7 (138-257)||(42439591-42439710)
chr7 (131-369)||(22206591-22206829)
chr7 (131-369)||(22227910-22228148)
chr7 (255-369)||(21688244-21688359)
chr7 (270-369)||(28693908-28694007)
chr7 (179-369)||(38991082-38991255)
chr7 (300-369)||(26722864-26722933)
chr7 (305-369)||(41759532-41759596)
chr7 (141-257)||(3012280-3012408)
chr7 (194-257)||(38129010-38129073)
chr7 (271-365)||(19377523-19377618)
chr7 (194-257)||(28694057-28694120)
chr7 (291-369)||(42439467-42439545)
chr7 (301-365)||(814882-814946)
chr7 (194-257)||(4843339-4843402)
chr7 (298-369)||(25688116-25688187)
chr7 (298-369)||(30852449-30852520)
chr7 (194-254)||(19377430-19377490)
chr7 (298-369)||(38128886-38128957)
chr7 (248-293)||(3012432-3012477)
chr7 (133-250)||(25688202-25688331)
chr7 (248-302)||(38128932-38128986)
chr7 (105-134)||(26723102-26723131)
chr7 (105-133)||(41759773-41759801)
[»] scaffold0638 (2 HSPs)
scaffold0638 (296-374)||(4215-4293)
scaffold0638 (131-250)||(4071-4202)
[»] scaffold0021 (3 HSPs)
scaffold0021 (298-369)||(109208-109280)
scaffold0021 (131-257)||(109316-109454)
scaffold0021 (300-357)||(112121-112179)
[»] scaffold0108 (1 HSPs)
scaffold0108 (131-251)||(21024-21141)


Alignment Details
Target: chr6 (Bit Score: 223; Significance: 1e-123; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 18 - 369
Target Start/End: Complemental strand, 9047196 - 9046820
Alignment:
Q  18 attattaatttaaatgaaataagacaagtttaattatctaatacatgatgttgtgctaatcaagcattatgtgcatgatgccatgcaggg-cggagccac 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9047196 attattaatttaaatgaaataagacaagtttaattatctaatacatgatgttgtgctaatcaagcattatgtgcatgatgccatgcaggggcggagccac 9047097  T
Q  117 ccccagctagcctgggct------------cagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt----- 199  Q
    ||||||||||||||||||            ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||         
T  9047096 ccccagctagcctgggctagtgtccagactcagcttcaactttctttgtagtaagtccaaccattactagaatttttagcttttcctgcggatttacctg 9046997  T
Q  200 -------ttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaatta 292  Q
           ||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  9046996 tagatttttgtgtagattccgcaggaaacacatttcctgcagattttgtcaaggatttaggttccgcaagaaatatatatctgtaggaaatgtgaaatta 9046897  T
Q  293 tctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||| | |||||||||||||||| ||||||||||||    
T  9046896 tctgcaggaaatgtgaaattattcaaaggaaggaaataacgttttccgataaattttttgcccaaactctataaaat 9046820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 133 - 369
Target Start/End: Complemental strand, 34249154 - 34248918
Alignment:
Q  133 ctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgc 232  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||||    
T  34249154 ctcaactccaactttctttgtagcaagcccaaccattactagaatttttagcttttcctgcggatttttgtgtaaattctgcaggaaacacatttcctgc 34249055  T
Q  233 atattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaac 332  Q
    | |||||||||||| |||||||||| || ||||||||||||||||| |||| |||||||||||| ||||||||||||||||| | |||||||||||||||    
T  34249054 agattttgccaagggtttaggttccacaggaaagatatatccgtagaaaatatgaaattatctgcaggaaatgtgaaattatccgcaggaaggaagtaac 34248955  T
Q  333 gttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  34248954 gttttgcgataaattttttgcccaggctctataaaat 34248918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 23663902 - 23663664
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||    
T  23663902 ggctcggctccaactttctttgtagcaagcccaaccattgctataatttttagcttttcctgcggatttttgtgtaaattccgcaggaaacacatttcct 23663803  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  23663802 gcagattttgccaaggatttatgttccgtaagaaagatatatccgtagaaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaatgaagta 23663703  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| |||||||||||  |||| |||||||||||    
T  23663702 acgttttgcgataaattttttatccaggctctataaaat 23663664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 9696016 - 9696266
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatt------------tttgtgtaaattccgcacga 218  Q
    ||||| ||||||||||||||||||| |||||||| ||||| |||||||||||| |||| ||| |||||            ||||||||||||||||| ||    
T  9696016 ggctcggctccaactttctttgtagcaagcccaatcattattagaatttttagattttcctgcggatttacctgcagatttttgtgtaaattccgcagga 9696115  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcac 318  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  9696116 aacatatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgc 9696215  T
Q  319 aggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9696216 aggaaggaagtaacgttttgcgataaattttttgcccagactctataaaat 9696266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 10397935 - 10397714
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| || |||||||||||| |||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||||||    
T  10397935 ggctcagctccaactttctttgtagcaaacccaaccattacgagaatttttagcttttcctgcggattgttgtgtaaattccgcaggaaacacatttcct 10397836  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||||||||||||||||||||||||                 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  10397835 gcatattttgccaaggatttaggt-----------------tccgtaggaaatgtgaaattatctgttggaaatgtgaaattattcgcaggaaggaagta 10397753  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  10397752 acgttttgcgataaattttttgcccagactctataaaat 10397714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 194 - 369
Target Start/End: Original strand, 2941258 - 2941433
Alignment:
Q  194 ggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    ||||||| ||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2941258 ggattttagtgtaaatttcgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcatgaaagatatatccgtaggaaatgtgaaattat 2941357  T
Q  294 ctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||| |||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  2941358 ctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaat 2941433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 105 - 369
Target Start/End: Original strand, 15528881 - 15529157
Alignment:
Q  105 gggcggagccacccccagctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt----- 199  Q
    ||||||||||||||||  |||||||||||| | |||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||| ||||||         
T  15528881 gggcggagccaccccccactagcctgggctaatctccaactttctttgtagcaagccctaccattattagaatttttagcttttcctgcggatttacctg 15528980  T
Q  200 -------ttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaatta 292  Q
           |||||||||||||||| ||||   |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||    
T  15528981 cggatgtttgtgtaaattccgcaggaaatgtatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatctgtaggaaatgtgaattta 15529080  T
Q  293 tctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||| |||||||||||||||||||  ||||| ||||||| ||||||| |||||||||||||| || |||||||||||    
T  15529081 tctgcaggaaatgtgaaattattcgtaggaaagaagtaatgttttgcgataaattttttgcctaggctctataaaat 15529157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 138 - 369
Target Start/End: Original strand, 15122011 - 15122254
Alignment:
Q  138 ctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt----------ttgtgt--aaattccgcacgaaacacat 225  Q
    |||||| ||||||||||| || ||| | ||||| ||||||||||||||||||||| ||||||          ||||||  |||||| ||| |||||||||    
T  15122011 ctccaattttctttgtagaaaaccctatcattattagaatttttagctttttctgcggatttacctgcggatttgtgtctaaattctgcaggaaacacat 15122110  T
Q  226 ttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaagg 325  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||| |||     
T  15122111 ttcctgcagattttgccaaggatttacgttccgcaggaaagatatatccgtaggaaatgtaaaattatctgcagaaaatgtgaaattattcgcagaaaga 15122210  T
Q  326 aagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||| |||||||||||||||| ||||||||||||    
T  15122211 aagtaacgttttgcgataaattttttgcccaaactctataaaat 15122254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 137 - 293
Target Start/End: Complemental strand, 1781159 - 1781003
Alignment:
Q  137 gctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgcatat 236  Q
    ||||||||||||||||||| || |||||||||||||| || ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| ||    
T  1781159 gctccaactttctttgtagcaaacccaaccattactataaattttagcttttcctgtggatttttgtgtaaattcctcaggaaacacatttcctgcagat 1781060  T
Q  237 tttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  1781059 tttgccaaggatttaggttccgcataaaagatatatccgtaggaaatgtgaaattat 1781003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 14939053 - 14938827
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||| ||||||||||| || || | |||||||||||| |||||| ||||| ||  ||||||| ||||||||||||| ||||||||||||||    
T  14939053 ggctcagctccaattttctttgtagcaaacctagccattactagaacttttagttttttatgctgatttttatgtaaattccgcaggaaacacatttcct 14938954  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||  |||||||     | |||     |||   || |||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  14938953 gcagattttgcttaggatttc----ctgca-----gat---tctgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcccaggaagaaagta 14938866  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    || |||||| |||| |||||||||||  |||||||||||    
T  14938865 acattttgcgataatttttttgcccaagctctataaaat 14938827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 31188338 - 31188217
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaatt 347  Q
    |||||| |||||| |||||||||||||  || |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||| ||    
T  31188338 tttaggatccgcaggaaagatatatcctcagaaaatttgaaattatccgtagaaaatgtgaaattattcacaggaaggaagtaacgttttgcgataattt 31188239  T
Q  348 ttttgcccagactctataaaat 369  Q
    |||||||||| |||||||||||    
T  31188238 ttttgcccaggctctataaaat 31188217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 2836193 - 2836072
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaatt 347  Q
    |||||| |||||| ||||  ||||||   |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  2836193 tttaggatccgcaggaaaagtatatcgacaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgtcttgtaataaatt 2836094  T
Q  348 ttttgcccagactctataaaat 369  Q
    |||||| |||||||||||||||    
T  2836093 ttttgctcagactctataaaat 2836072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 134 - 257
Target Start/End: Original strand, 339311 - 339434
Alignment:
Q  134 tcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgca 233  Q
    ||||||| |||||||||||||| || | || ||||||||| || ||||||||||| |||||||||||||||||||||||| | |||| ||||||||||||    
T  339311 tcagctctaactttctttgtagcaaactcagccattactaaaacttttagcttttcctgtggatttttgtgtaaattccgtaggaaatacatttcctgca 339410  T
Q  234 tattttgccaaggatttaggttcc 257  Q
     ||||| |||||||||||||||||    
T  339411 gattttaccaaggatttaggttcc 339434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 2960657 - 2960883
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||| ||||||||||| ||| ||| ||| |||||||| ||||||||||| ||| ||||| || |||||||| ||||  |||||||||||||    
T  2960657 ggctcagctccaattttctttgtagcaagtccagccaatactagaacttttagcttttcctgcggattattatgtaaatttcgcagaaaacacatttcct 2960756  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||  |||||||| ||||||    | | ||     ||||   ||| ||| ||||||||||||||| | ||||||||||||||||||| || ||||||||||    
T  2960757 gctaattttgcccaggatt----tcctgc-----agat---tccctagaaaatgtgaaattatccgcaggaaatgtgaaattattcgcaagaaggaagta 2960844  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    || ||||||||||| ||||| || ||| |||||||||||    
T  2960845 acattttgcaataattttttcgctcaggctctataaaat 2960883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 369
Target Start/End: Complemental strand, 1781021 - 1780948
Alignment:
Q  296 gtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  1781021 gtaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttatgcccagactctataaaat 1780948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 369
Target Start/End: Complemental strand, 28614406 - 28614309
Alignment:
Q  272 tccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||||| | || |||||||||||||||| ||||||||||||||| |||||| |||| |||||||| ||| |||||||||||    
T  28614406 tccgtaggaaatgtgaaattatcagcagaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcacaggctctataaaat 28614309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 369
Target Start/End: Complemental strand, 31200176 - 31200061
Alignment:
Q  255 tccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgtttt-gcaataaattttttgc 353  Q
    |||||| | |||||||||| | |||||||||||||||||| || | |||||||||||||||| |||||||||||||||||||| || |||| ||||||||    
T  31200176 tccgcaggtaagatatatctgcaggaaatgtgaaattatccgtggaaaatgtgaaattattcgcaggaaggaagtaacgttttagcgataatttttttgc 31200077  T
Q  354 ccagactctataaaat 369  Q
    |||  |||||||||||    
T  31200076 ccatgctctataaaat 31200061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 136 - 257
Target Start/End: Complemental strand, 2836350 - 2836217
Alignment:
Q  136 agctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatt------------tttgtgtaaattccgcacgaaacac 223  Q
    |||||||||||||||||||| || |||||||||| |||||| ||||||||||||||| |||||            || |||||||||||||| |||| ||    
T  2836350 agctccaactttctttgtagcaaacccaaccattcctagaacttttagctttttctgcggattgatctgcggattttcgtgtaaattccgcaggaaatac 2836251  T
Q  224 atttcctgcatattttgccaaggatttaggttcc 257  Q
    |||||||||| |||||| ||||||||||||||||    
T  2836250 atttcctgcagattttgtcaaggatttaggttcc 2836217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 369
Target Start/End: Original strand, 34188911 - 34189009
Alignment:
Q  271 atccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||| || ||  || |||||||||||| | ||||||||||| ||| ||||| |||||    
T  34188911 atccgcaggaaatgtgaaattatccgcaggaaatgtgaaattattcgcaagagagaggtaacgttttgcgacaaattttttgctcaggctctagaaaat 34189009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 339478 - 339549
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||| |  ||||||||||||||| |||||| ||||||||||||||||  |||||||||||    
T  339478 aggaaatgtgaaattaattgcaggaaggaagtaacattttgcgataaattttttgcccaagctctataaaat 339549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 34188763 - 34188831
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt 199  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| ||| | ||||| ||| ||||||    
T  34188763 ggctcagctccaactttctttgtagcaagcccagccattactagaactttcaacttttcctgcggattt 34188831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 28614526 - 28614469
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt 188  Q
    ||||||||||||| | ||||||||| ||||| | |||||||||||| ||||| |||||    
T  28614526 ggctcagctccaattatctttgtagcaagcctagccattactagaacttttaactttt 28614469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 133
Target Start/End: Original strand, 5582410 - 5582438
Alignment:
Q  105 gggcggagccacccccagctagcctgggc 133  Q
    |||||||||||||||||||||||||||||    
T  5582410 gggcggagccacccccagctagcctgggc 5582438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 105 - 369
Target Start/End: Original strand, 1642 - 1906
Alignment:
Q  105 gggcggagccacccccagctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtg 204  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| || |||||||| ||||| ||  |||||||||||    
T  1642 gggcggagccacccccagctagtctgggctcagctccaactttctttgtagaaagcccaatcattattaaaatttttaccttttccttcggatttttgtg 1741  T
Q  205 taaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaat 304  Q
    |||||| |||| ||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  1742 taaatttcgcaggaaacacatttcctgcagattttgccaagaatttacgttccgcaggaaagatatatccgtaggaaatgtgaacttatctgcaggaaat 1841  T
Q  305 gtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  1842 gtgaaattattcgcagaaaggaagtaacgttttgcgataaattttttgcccagactctataaaat 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 105 - 369
Target Start/End: Original strand, 29257313 - 29257577
Alignment:
Q  105 gggcggagccacccccagctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtg 204  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| || |||||||| ||||| ||  |||||||||||    
T  29257313 gggcggagccacccccagctagtctgggctcagctccaactttctttgtagaaagcccaatcattattaaaatttttaccttttccttcggatttttgtg 29257412  T
Q  205 taaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaat 304  Q
    |||||| |||| ||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||||    
T  29257413 taaatttcgcaggaaacacatttcctgcagattttgccaagaatttacgttccgcaggaaagatatatccgtaggaaatgtgaacttatctgcaggaaat 29257512  T
Q  305 gtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  29257513 gtgaaattattcgcagaaaggaagtaacgttttgcgataaattttttgcccagactctataaaat 29257577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 105 - 367
Target Start/End: Complemental strand, 18299307 - 18299049
Alignment:
Q  105 gggcggagccacccccagctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtg 204  Q
    |||||||||||||||||||    | ||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||  || |||||||||||    
T  18299307 gggcggagccacccccagc----ccgggctcacctccaactttctttgtagcaagcccaaccattactagaatttttaacttttcttgcggatttttgtg 18299212  T
Q  205 taaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaat 304  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  18299211 taaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaagaaagatatatctgtaggaaatgtgaaattatctgcaggaaat 18299112  T
Q  305 gtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaa 367  Q
    |||||||||||| |||||||||||||||||||| | |||||||||||||||| ||| ||||||    
T  18299111 gtgaaattattcgcaggaaggaagtaacgttttacgataaattttttgcccaaactttataaa 18299049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 41115012 - 41114774
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||| ||||||||||||||||||| |||| |||||||||||||||||||||| |||| ||| ||||||| |||||||||||||| ||||||||||||||    
T  41115012 ggctcggctccaactttctttgtagcaagctcaaccattactagaatttttagtttttcctgcggattttcgtgtaaattccgcaggaaacacatttcct 41114913  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||    
T  41114912 gcagattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcatgaaggaagta 41114813  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| ||||||||||||||||  |||||||||||    
T  41114812 acgttttgcgataaattttttgcccaagctctataaaat 41114774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 6800028 - 6799790
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||    
T  6800028 ggctcggctccaactttctttgtagcaagctcaaccattactagaatttttaacttttcctgcggatttttgtgtaaattccgcaggaaacacatttcct 6799929  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||    
T  6799928 gcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaacta 6799829  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||  |||||   ||||||||| |||||||||||    
T  6799828 acgttttgtgataaaaaatttgcccaggctctataaaat 6799790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 13203740 - 13203978
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  13203740 ggctcagctccaactttctttgtagcaagcccaaccattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaggaaacacgtttcct 13203839  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  | |||||||||||||||| | |||||||||||    
T  13203840 gcagattttgccaaggatttaggttccgcaggaaagagatatccgtaggaaatgtgaaattatctgcggaaaatgtgaaattattcgctggaaggaagta 13203939  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    || |||||| ||||||||||||| ||  |||||||||||    
T  13203940 acattttgcgataaattttttgctcatgctctataaaat 13203978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 131 - 293
Target Start/End: Complemental strand, 22572843 - 22572681
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| ||| | ||||||||||||||||| || ||||||||||||||    
T  22572843 ggctcagctccaactttctttgtagcaagcctaaccattactagaatatttagcttttcctgcgaatttttgtgtaaattccccaggaaacacatttcct 22572744  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    ||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  22572743 gcagattttgccaaggatttaggttccgcaagaaagatatattcataggaaatgtgaaattat 22572681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 17148754 - 17149007
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| |||| || ||||||||| || |||||| |||  ||| |||||||||||||||||||||| ||||||||||||||    
T  17148754 ggctcagctccaactttctttgtagcaagctcagccattactataacttttaggtttacctgcggatttttgtgtaaattccgcaggaaacacatttcct 17148853  T
Q  231 gcatattttgccaaggatttaggttcc--------gcaaga----aagatat----atccgtaggaaatgtgaaattatctgtaggaaatgtgaaattat 314  Q
    ||| |||||| ||||||||||||||||        | || |    | ||| |    ||||| |||||||||| ||||||||| |||||||||||||||||    
T  17148854 gcagattttg-caaggatttaggttcccaggtgagggaataccataggattttaggatccgcaggaaatgtggaattatctgcaggaaatgtgaaattat 17148952  T
Q  315 tcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    || |||||||||||||||||||||  ||||||||||||||||  ||| |||||||    
T  17148953 tcgcaggaaggaagtaacgttttgagataaattttttgcccaagctcaataaaat 17149007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 133 - 293
Target Start/End: Original strand, 2475797 - 2475962
Alignment:
Q  133 ctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcac-----gaaacacattt 227  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| ||||||||| |  || |||||||||||||||||||||||     ||||| |||||    
T  2475797 ctcagctccaactttctttgtaggaagcccagccattactagaacttttagcttgtcttgcggatttttgtgtaaattccgcacaacatgaaactcattt 2475896  T
Q  228 cctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    | |||| |||||||||| ||| ||||||||||| ||||||||||| || |||||||||||||||||    
T  2475897 cttgcagattttgccaatgatataggttccgcaggaaagatatattcgcaggaaatgtgaaattat 2475962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 105 - 254
Target Start/End: Original strand, 12000468 - 12000619
Alignment:
Q  105 gggcggagcca-cccccagctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggat-ttttg 202  Q
    ||||||||||| |||||||||||||||||| || |||||||||||||||||  ||| ||| |||||| ||||| ||||||||||| ||| |||| |||||    
T  12000468 gggcggagccaacccccagctagcctgggcacaactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggatgttttg 12000567  T
Q  203 tgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggt 254  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  12000568 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggatataggt 12000619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 304117 - 303996
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaatt 347  Q
    |||||| |||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||  | ||||||||||||||| |||| ||    
T  304117 tttaggatccgcaggaaagatatatccgcaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcagataagaagtaacgttttgcgataattt 304018  T
Q  348 ttttgcccagactctataaaat 369  Q
    ||||||||| ||||||||||||    
T  304017 ttttgcccaaactctataaaat 303996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 270 - 369
Target Start/End: Original strand, 41010624 - 41010723
Alignment:
Q  270 tatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  41010624 tatccgtaggaaatgtgaaattttctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgtccacactctataaaat 41010723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 304264 - 304141
Alignment:
Q  132 gctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctg 231  Q
    |||||||||||||||||||||||| |||| || |||||||||||| ||||||||||| ||| ||| ||  ||||||||| |||| |||||||||||| ||    
T  304264 gctcagctccaactttctttgtagcaagctcagccattactagaacttttagcttttcctgcggagtt--gtgtaaatttcgcaggaaacacatttcttg 304167  T
Q  232 catattttgccaaggatttaggttcc 257  Q
    || |||||||||||||||||||||||    
T  304166 cagattttgccaaggatttaggttcc 304141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 131 - 257
Target Start/End: Original strand, 25562896 - 25563034
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt------------tctgtggatttttgtgtaaattccgcacga 218  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||            |||| ||||| || ||||||||||||| ||    
T  25562896 ggctcagctccaactttctttgtagcaagcccaaccattactagaacttttagcttttcctgcggatttatctgcggattgttttgtaaattccgcagga 25562995  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    || |||||||||||| |||||||||||||||||||||||    
T  25562996 aatacatttcctgcagattttgccaaggatttaggttcc 25563034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 133 - 257
Target Start/End: Original strand, 41010450 - 41010574
Alignment:
Q  133 ctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgc 232  Q
    ||||||||||||||| |||||| ||||  || | |||||||||| |||||| |||||||| |||||||||| ||||||| ||| ||||||||||||||||    
T  41010450 ctcagctccaactttttttgtactaagttcagctattactagaacttttagttttttctgcggatttttgtataaattctgcaggaaacacatttcctgc 41010549  T
Q  233 atattttgccaaggatttaggttcc 257  Q
    | ||||| | |||||||||||||||    
T  41010550 agattttactaaggatttaggttcc 41010574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 136 - 256
Target Start/End: Complemental strand, 33909479 - 33909359
Alignment:
Q  136 agctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgcata 235  Q
    |||||||||||||||||||| |||| ||  |||||||||||||||||| |||| ||| | ||||||||| |||||| ||| || | |||||||||||| |    
T  33909479 agctccaactttctttgtagcaagctcagtcattactagaatttttagtttttcctgcgaatttttgtgaaaattctgcaggagaaacatttcctgcaga 33909380  T
Q  236 ttttgccaaggatttaggttc 256  Q
    |||| |||| |||||||||||    
T  33909379 tttttccaaagatttaggttc 33909359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 2475946 - 2476017
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||| |||||||||||    
T  2475946 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataatttttttgcccaggctctataaaat 2476017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 17249470 - 17249541
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||||||||||    
T  17249470 aggaaatgtgaaattattcgcaggaagaaagtaacgttttgctataaatattttgcccagactctataaaat 17249541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 248 - 365
Target Start/End: Original strand, 12000646 - 12000764
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtagg-aaatgtgaaattattcacaggaaggaagtaacgttttgcaataaat 346  Q
    |||||| |||||| |||||||||||||| |||||||||||||||||| |  || |||||| ||||||||| ||||||||| ||||| |||||| |||| |    
T  12000646 tttaggatccgcaggaaagatatatccgcaggaaatgtgaaattatccgccggaaaatgtaaaattattcgcaggaaggacgtaacattttgcgataatt 12000745  T
Q  347 tttttgcccagactctata 365  Q
    |||||||| || |||||||    
T  12000746 tttttgcctaggctctata 12000764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 15651247 - 15651303
Alignment:
Q  198 ttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggt 254  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  15651247 ttttgtgtaaattccgcaggaaacacatttcctgcgtattttgccaaggatttaggt 15651303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 22572698 - 22572626
Alignment:
Q  297 taggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||||||||||| |||| || ||||||||    
T  22572698 taggaaatgtgaaattattcgcaggaagaaagtaacgttttgcgataaattttttgtccaggctttataaaat 22572626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 45444429 - 45444357
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaatt-ttttgcccagactctataaaat 369  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||    
T  45444429 aggaaatgtgaaattattcgcaggaaggaagtaatgttttgcaataaatttttttgtccagactctatgaaat 45444357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 17249350 - 17249416
Alignment:
Q  190 ctgtggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttc 256  Q
    ||||||||||||||||||||||| || |||||||||||| || | ||||||||||||||||||||||    
T  17249350 ctgtggatttttgtgtaaattccacaggaaacacatttcttgtagattttgccaaggatttaggttc 17249416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 15651344 - 15651433
Alignment:
Q  262 gaaagatatatccgtaggaaatgtgaaattatctgtagg-aaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttt 350  Q
    |||||||||||||  |||||||||||||||||| | ||| |||||| ||||||||| ||||||||| ||||| |||||| ||||||||||    
T  15651344 gaaagatatatccccaggaaatgtgaaattatccgcaggaaaatgtaaaattattcgcaggaaggacgtaacattttgcgataaattttt 15651433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 25563091 - 25563159
Alignment:
Q  277 aggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaa 345  Q
    |||||||||||||||||||| ||||||| ||||||||||  ||| |||||||||||||||||| |||||    
T  25563091 aggaaatgtgaaattatctgcaggaaatatgaaattatttgcagaaaggaagtaacgttttgcgataaa 25563159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 33909322 - 33909251
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||  || |||||| ||||| |||||| ||||| |||||||||||||||||||||||    
T  33909322 aggaaatgtgaaattatttgcatgaaggatgtaacattttgcgataaagtttttgcccagactctataaaat 33909251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 256
Target Start/End: Original strand, 15429151 - 15429276
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||| | ||||||||||||| ||| |  | |||||||||||  | | |||||||||  ||||||| |||||||||||||| ||||||  ||||||    
T  15429151 ggctcagcttctactttctttgtagcaagtctgatcattactagaacctctcgctttttcttcggattttggtgtaaattccgcaggaaacatgtttcct 15429250  T
Q  231 gcatattttgccaaggatttaggttc 256  Q
    |   |||||| |||||||||||||||    
T  15429251 gtggattttgtcaaggatttaggttc 15429276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 210
Target Start/End: Complemental strand, 45444606 - 45444495
Alignment:
Q  105 gggcggagccacccccagctagcctgggctca------gctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatt 198  Q
    ||||||||||||||||||||||| |  |||||      |||||||||||||||||||||||| ||   ||||  | |||||||||||||| ||| |||||    
T  45444606 gggcggagccacccccagctagcattagctcaagcttagctccaactttctttgtagtaagctcagttattatcacaatttttagcttttcctgcggatt 45444507  T
Q  199 tttgtgtaaatt 210  Q
    ||||||||||||    
T  45444506 tttgtgtaaatt 45444495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 41010604 - 41010645
Alignment:
Q  271 atccgtaggaaatgtgaaattatctgtaggaaatgtgaaatt 312  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  41010604 atccgcaggaaatgtgaaattatccgtaggaaatgtgaaatt 41010645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 16221001 - 16220933
Alignment:
Q  301 aaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||| ||||||   ||| |||||| ||||||||||| |||| |||||||||||| |||||||||||    
T  16221001 aaatgtgcaattatatgcagaaaggaaataacgttttgcgataatttttttgcccaggctctataaaat 16220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 34756728 - 34756790
Alignment:
Q  195 gatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    |||||| |||||||||||| | ||| ||| |||||||   |||||||||||||||||||||||    
T  34756728 gattttggtgtaaattccgtaggaatcacgtttcctgtggattttgccaaggatttaggttcc 34756790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 176
Target Start/End: Complemental strand, 4570610 - 4570577
Alignment:
Q  143 actttctttgtagtaagcccaaccattactagaa 176  Q
    ||||||||||||||||||||| ||||||||||||    
T  4570610 actttctttgtagtaagcccagccattactagaa 4570577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 17249441 - 17249486
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    |||||| ||||||  ||||||||||||| |||||||||||||||||    
T  17249441 tttaggatccgcattaaagatatatccgcaggaaatgtgaaattat 17249486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 27702014 - 27702079
Alignment:
Q  123 ctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt 188  Q
    ||||||| ||||||||||||||||||| ||||  ||  ||| ||||||||| || |||||||||||    
T  27702014 ctagcctaggctcagctccaactttctctgtaacaaatccagccattactaaaagttttagctttt 27702079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 179; Significance: 2e-96; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 30248937 - 30249175
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  30248937 ggctcggctccaactttctttgtagcaagcccaactattactagaatttttagctttttctgcggatttttgtgtaaattccgcaggaaacacatttcct 30249036  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||  ||||||| ||| |    
T  30249037 gcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcagaaaatgtgaaattatttgcaggaagaaagca 30249136  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  30249137 acgttttgcgataaattttttgcccagactctgtaaaat 30249175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 34443938 - 34444177
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||| |||||||||| ||||||||||| ||||  ||||||||    
T  34443938 ggctcagctccaactttctttgtagcaagccctaccattactagaatttgtagcttttcctgcggatttttgtctaaattccgcaagaaatgcatttcct 34444037  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||||    
T  34444038 gcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaaggaagta 34444137  T
Q  331 acgttttgcaataa-attttttgcccagactctataaaat 369  Q
    ||||||||| ||||  |||||||||||| |||| ||||||    
T  34444138 acgttttgcgataattttttttgcccaggctctctaaaat 34444177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 35468862 - 35469113
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaattttt-agctttttctgtggat------------ttttgtgtaaattccgcacg 217  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||| ||||            |||||||||||||||||| |    
T  35468862 ggctcggctccaactttctttgtagcaagcccaaccattgctagaattttttagctttttctgcggatttttctgcggatttttgtgtaaattccgcagg 35468961  T
Q  218 aaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattca 317  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||     
T  35468962 aaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtagaaaatgtgaaattatctgcaggaaatgtgaaattattcg 35469061  T
Q  318 caggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  35469062 caggaaggaagtaacattttgcgataaattttttgcccaggctctataaaat 35469113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 15675273 - 15675523
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||| |||| |||||||||||| | || ||||||||||||||||||||||| ||||||||| ||||||            |||||||||||||||| ||    
T  15675273 ggctcggctctaactttctttgttgcaaacccaaccattactagaatttttaactttttctgcggatttacctgcggagttttgtgtaaattccgcagga 15675372  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcac 318  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |    
T  15675373 aacacatttcctgcagattttgccaaggatttaagttccgcaggaaagatatatccgaaggaaatgtgaaattatctacaggaaatgtgaaattattcgc 15675472  T
Q  319 aggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  15675473 aggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaat 15675523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 225 - 369
Target Start/End: Complemental strand, 14832860 - 14832716
Alignment:
Q  225 tttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaag 324  Q
    ||||||| | |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  14832860 tttcctgtagattttgccaaggatttagattccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaag 14832761  T
Q  325 gaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||    
T  14832760 gaagtaatgttttgcgataaattttttgcccagactctataaaat 14832716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 225 - 365
Target Start/End: Original strand, 2476431 - 2476571
Alignment:
Q  225 tttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaag 324  Q
    ||||||||  |||||  ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||    
T  2476431 tttcctgcggattttatcaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaag 2476530  T
Q  325 gaagtaacgttttgcaataaattttttgcccagactctata 365  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  2476531 gaagtaacgttttgcgataaattttttgcccaggctctata 2476571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 33006867 - 33007096
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||| ||||||||||||||||||| || |||||||||||||| | |||||||||||| ||| ||||||            |||||||||||||| | ||    
T  33006867 ggctcggctccaactttctttgtagcaaacccaaccattactaaattttttagcttttcctgcggatttacctgcggatttttgtgtaaattccgtagga 33006966  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcac 318  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||                     ||||||||||||||||||| |    
T  33006967 aacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgt---------------------aggaaatgtgaaattattcgc 33007045  T
Q  319 aggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33007046 aggaaggaagtaacgttttgcgataaattttttgcccagactctataaaat 33007096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 131 - 257
Target Start/End: Original strand, 15503888 - 15504014
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    |||||| || ||| ||||||||||| ||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||||||||    
T  15503888 ggctcaccttcaaatttctttgtagcaagcctaaccattactagaatttttagcttttcctgcggatttttgtgtaaattctgcaggaaacacatttcct 15503987  T
Q  231 gcatattttgccaaggatttaggttcc 257  Q
    ||| |||||||||||||||||||||||    
T  15503988 gcagattttgccaaggatttaggttcc 15504014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 131 - 293
Target Start/End: Original strand, 34846327 - 34846501
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggat------------ttttgtgtaaattccgcacga 218  Q
    ||||| ||||||||||||||||||| ||| | |||||||||||||||||||||||| | ||| ||||            ||||||||||||||||||  |    
T  34846327 ggctcggctccaactttctttgtagcaagtcaaaccattactagaatttttagcttatcctgcggatttacctccggatttttgtgtaaattccgcagta 34846426  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    |||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34846427 aacacatttcctacagattttgccaaggatttaggttccgcatgaaagatatatccgtaggaaatgtgaaattat 34846501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 248 - 365
Target Start/End: Original strand, 15504038 - 15504155
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaatt 347  Q
    |||||| |||||  |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  15504038 tttaggatccgcgggaaagatatatccgcaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataaatt 15504137  T
Q  348 ttttgcccagactctata 365  Q
    ||||| | || |||||||    
T  15504138 ttttgtcgaggctctata 15504155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 32953811 - 32953573
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||| ||||||||||| ||  ||||||            || ||||||||||| | ||    
T  32953811 ggctcagctccaattttctttgtagcaagcccagccattactagaacttttagcttttcctacggatttacctgcaaatttttatgtaaattccgtagga 32953712  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcac 318  Q
    ||||||||||||||| |||||||| |||||||     | |||     |||   |||| |||||||||||||||||||| |||||||||||||||||||      
T  32953711 aacacatttcctgcagattttgcctaggatttc----ctgca-----gat---tccgcaggaaatgtgaaattatctgcaggaaatgtgaaattattcgt 32953624  T
Q  319 aggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||| |||||| |||| |||||||| ||| |||||||||||    
T  32953623 aggaaggaagtaacattttgcgataacttttttgcacaggctctataaaat 32953573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 276 - 369
Target Start/End: Complemental strand, 1672485 - 1672392
Alignment:
Q  276 taggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||| |||||||||||    
T  1672485 taggaaatgtgaaattatctgcagaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaat 1672392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 257
Target Start/End: Complemental strand, 16667635 - 16667499
Alignment:
Q  133 ctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacgaaa 220  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||| ||| ||||||            |||||||||||||||| ||||    
T  16667635 ctcagctccaactttctttgtagcaagtccagccattactagaacttttagcttttcctgcggatttacctgcggatttttgtgtaaattccgcaggaaa 16667536  T
Q  221 cacatttcctgcatattttgccaaggatttaggttcc 257  Q
    ||||||||||||| |||||||||||||||||||||||    
T  16667535 cacatttcctgcagattttgccaaggatttaggttcc 16667499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 7162227 - 7161989
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||| || ||||||||||| ||| ||||||            || |||||||||| || ||    
T  7162227 ggctcagctccaattttctttgtagcaagcccagccattactaaaaattttagcttttcctgcggatttacctgaggatttttatgtaaattccacagga 7162128  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcac 318  Q
    ||||||||||||||| |||||||| |||||||     | |||     |||   |||| ||||||||||||||||||   ||||||||||||||||||  |    
T  7162127 aacacatttcctgcagattttgcctaggatttc----ctgca-----gat---tccgcaggaaatgtgaaattatccacaggaaatgtgaaattatttgc 7162040  T
Q  319 aggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||| |||||| |||| |||||||||||| |||||||||||    
T  7162039 aggaaggaagtaacattttgcgataatttttttgcccaggctctataaaat 7161989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 369
Target Start/End: Complemental strand, 12267385 - 12267288
Alignment:
Q  271 atccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||| |||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||    
T  12267385 atccgcaggaaatgtgaa-ttatccgcagaaaatgtgaaattattcacaggaaggaagtaacgttttgcgataaactttttgcccaggctctataaaat 12267288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 369
Target Start/End: Complemental strand, 36234558 - 36234460
Alignment:
Q  271 atccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||| || |||||||||||| |||||| |||||||||||| ||| ||||||||||||    
T  36234558 atccgcaggaaatgtgaaattatctgcaagaaatgtgaaattattcgcaagaaggaagtaacattttgcgataaattttttgtccaaactctataaaat 36234460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 248 - 369
Target Start/End: Original strand, 6900856 - 6900977
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaatt 347  Q
    |||||| |||||  |||||||||||||| | |||||||||||||||| | ||||||||||||||||||| || |||||||||||| |||||| |||||||    
T  6900856 tttaggatccgcgggaaagatatatccgcaagaaatgtgaaattatccgcaggaaatgtgaaattattcgcatgaaggaagtaacattttgcgataaatt 6900955  T
Q  348 ttttgcccagactctataaaat 369  Q
    |||| | || ||||||| ||||    
T  6900956 ttttactcatactctattaaat 6900977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 369
Target Start/End: Original strand, 16567904 - 16568001
Alignment:
Q  272 tccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||| |||||||||||||||||| | ||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||  |||||||||||    
T  16567904 tccgcaggaaatgtgaaattatccgcaggaaatgtgaaattattcccaggaaggaagtaacattttgcgataatttttttgcccaagctctataaaat 16568001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 131 - 257
Target Start/End: Original strand, 21068969 - 21069107
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtgg------------atttttgtgtaaattccgcacga 218  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||            ||||||||||| |||||||| ||    
T  21068969 ggctcaactctaactttctttgtagtaagcccaaccattactagaatttttagcctttcctgcggatttacctgcgcatttttgtgtatattccgcaaga 21069068  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  21069069 aacacatttcctgcagattttgccaaagatttaggttcc 21069107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 291 - 369
Target Start/End: Original strand, 21069153 - 21069231
Alignment:
Q  291 tatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||| ||||||||||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  21069153 tatctgcaggaaatgtgaaattatttccaggaaggaaataacgttttgcgataaattttttgcccagactctataaaat 21069231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 257
Target Start/End: Complemental strand, 36234712 - 36234588
Alignment:
Q  133 ctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgc 232  Q
    ||||||||||| ||||||||||| ||||||| |||||| ||||| ||||| |||||  || |||||||| ||||||||| ||| ||||| ||||||||||    
T  36234712 ctcagctccaattttctttgtagcaagcccagccattattagaacttttaacttttcatgcggatttttatgtaaattcagcaggaaacgcatttcctgc 36234613  T
Q  233 atattttgccaaggatttaggttcc 257  Q
    | ||||| |||||| |||| |||||    
T  36234612 agattttaccaagggtttaagttcc 36234588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 37552053 - 37552124
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  37552053 aggaaatgtgaaattattcgcaggaaggaagtaacattttgcaataatttttttgcccaggctctataaaat 37552124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 37654883 - 37654954
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  37654883 aggaaatgtgaaattattcgcaggaaggaagtaacattttgcaataatttttttgcccaggctctataaaat 37654954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 271 - 369
Target Start/End: Complemental strand, 13942755 - 13942658
Alignment:
Q  271 atccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||| |||||||||||| |||||   ||||||||||||||||||| |||||||||||||||||||||| |||| |||||| ||||| |||||||||||    
T  13942755 atccgcaggaaatgtgaa-ttatccacaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataatttttttacccaggctctataaaat 13942658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 43228786 - 43228548
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    |||||| |||||| ||||||||||| ||||||| |||||||||||| ||||||||||| ||  ||||||            || ||||||||||||| ||    
T  43228786 ggctcaactccaattttctttgtagcaagcccagccattactagaacttttagcttttcctacggatttacctgcggatgtttatgtaaattccgcagga 43228687  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcac 318  Q
    ||||||||||||||| |||||||| |||||||     | |||     |||   |||| |||||||||||||||||||| | ||||| ||||||||||| |    
T  43228686 aacacatttcctgcagattttgcctaggatttc----ctgca-----gat---tccgcaggaaatgtgaaattatctgcaagaaatatgaaattattcgc 43228599  T
Q  319 aggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||| | |||||| |||||| || | |||||||||||| |||||||||||    
T  43228598 aggaaaggagtaacattttgcgattagttttttgcccaggctctataaaat 43228548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 257
Target Start/End: Complemental strand, 17192839 - 17192675
Alignment:
Q  105 gggcggagccacccc-cagctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt---- 199  Q
    ||||||||||||||| ||||| |||  ||||||||||||||||||||||||| |||| || |||||||||||| |||||||| || ||| ||||||        
T  17192839 gggcggagccacccctcagct-gcccaggctcagctccaactttctttgtagcaagctcagccattactagaacttttagctcttcctgcggatttaccg 17192741  T
Q  200 --------ttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
            |||||| ||||||||| |||| |||||||||||| |||||| ||||||||||||||||    
T  17192740 gcggatttttgtgtcaattccgcaggaaatacatttcctgcagattttgtcaaggatttaggttcc 17192675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 767416 - 767490
Alignment:
Q  277 aggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaatttttt 351  Q
    |||||||||||||||||| | || ||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  767416 aggaaatgtgaaattatccgcagaaaatgagaaattattcgcaggaagaaagtaacgttttgcaataaatttttt 767490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 42989509 - 42989607
Alignment:
Q  134 tcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgc 232  Q
    |||||| | ||||||||||  | ||||||| |||||||||||| || | |||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  42989509 tcagcttctactttctttgaggcaagcccagccattactagaacttctcgctttttctgcgaatttttgtgtaaattccgcaggaaacacatttcctgc 42989607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 255
Target Start/End: Complemental strand, 7159721 - 7159609
Alignment:
Q  143 actttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgcc 242  Q
    ||||||||||||| |||| || ||||||||||||  | | |||||| |||| |||||| ||||| |||||||| ||||||| ||||||||  ||||||||    
T  7159721 actttctttgtagcaagctcagccattactagaacctctcgcttttcctgttgattttggtgtacattccgcaggaaacacgtttcctgcggattttgcc 7159622  T
Q  243 aaggatttaggtt 255  Q
    ||| |||||||||    
T  7159621 aagaatttaggtt 7159609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 2476376 - 2476445
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttt 200  Q
    ||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||| ||| |||||||    
T  2476376 ggctcagctccaattttctttgtagcaagtcctaccattactagaatttttagcttttcctgcggatttt 2476445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 12267553 - 12267485
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt 199  Q
    |||| |||||||||||||||||||| ||||| | | |||||||||| ||||||||||| ||||||||||    
T  12267553 ggcttagctccaactttctttgtagcaagcctagcaattactagaacttttagcttttcctgtggattt 12267485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 767317 - 767380
Alignment:
Q  194 ggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    |||||||||| ||||||||||| |||||||||||||| ||  ||||||||||||||||| ||||    
T  767317 ggatttttgtataaattccgcaggaaacacatttcctacaggttttgccaaggatttagattcc 767380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 34846505 - 34846556
Alignment:
Q  318 caggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||||||||| |||||||||||| |||| |||||||||||    
T  34846505 caggaaggaagtaacgttttgcgataaattttttgtccaggctctataaaat 34846556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 16567763 - 16567820
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt 188  Q
    ||||||||||||| ||||||||||| ||| ||| |||||||||||| |||||||||||    
T  16567763 ggctcagctccaattttctttgtagcaagtccagccattactagaacttttagctttt 16567820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 13694807 - 13694875
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt 199  Q
    |||||| || ||||||||||||||| ||||||| |||||||||||| || | |||||| ||||||||||    
T  13694807 ggctcaacttcaactttctttgtagcaagcccatccattactagaacttctcgcttttcctgtggattt 13694875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 374
Target Start/End: Original strand, 37779782 - 37779858
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaatatatg 374  Q
    ||||||||||||||||||| | ||||||||||||| |||| | |||| |||||||| ||  ||||||||||| ||||    
T  37779782 aggaaatgtgaaattattcgctggaaggaagtaacattttacgataatttttttgcacaagctctataaaatttatg 37779858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 1672630 - 1672579
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaattttta 182  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||| |||||    
T  1672630 ggctcagctccaattttctttgtagcaatcccaaccattactagaactttta 1672579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 6900747 - 6900802
Alignment:
Q  133 ctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt 188  Q
    |||| |||||||||||||||||| |||| || |||||||||||| |||||||||||    
T  6900747 ctcaactccaactttctttgtagcaagctcagccattactagaacttttagctttt 6900802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 14832914 - 14832846
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttt 200  Q
    ||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| ||||| |||| ||||||    
T  14832914 ggctcggctccaacttt-tttgtagcaagtccaaccattactaaaatttttatcttttcctgtagatttt 14832846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 13695022 - 13695090
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt 199  Q
    ||||||||| ||||||||||||||| |||  || |||||||||||| || | |||||| ||||||||||    
T  13695022 ggctcagcttcaactttctttgtagcaagttcatccattactagaacttctcgcttttcctgtggattt 13695090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 374
Target Start/End: Original strand, 37607575 - 37607651
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaatatatg 374  Q
    ||||||||||||||||||  | ||||||||||||| |||| | |||| |||||||| ||  ||||||||||| ||||    
T  37607575 aggaaatgtgaaattatttgctggaaggaagtaacattttacgataatttttttgcacaagctctataaaatttatg 37607651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 37779636 - 37779704
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt 199  Q
    |||||| |||||| ||||||||||| |||  || |||||||||||| |||||| |||||||| ||||||    
T  37779636 ggctcaactccaattttctttgtagcaagttcagccattactagaacttttagttttttctgcggattt 37779704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 369
Target Start/End: Original strand, 42989673 - 42989708
Alignment:
Q  334 ttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||| ||||||||||||||||    
T  42989673 ttttgcaataaattttttgtccagactctataaaat 42989708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 39605847 - 39605801
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatc 294  Q
    |||||| |||||| |||||||||||||| |||||||||| |||||||    
T  39605847 tttaggatccgcaggaaagatatatccgcaggaaatgtgcaattatc 39605801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 12267469 - 12267420
Alignment:
Q  203 tgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttag 252  Q
    ||||||||||||| ||||||||||||||| | ||||||||| | ||||||    
T  12267469 tgtaaattccgcaagaaacacatttcctgtagattttgccacgaatttag 12267420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 13942926 - 13942869
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt 188  Q
    ||||||| ||||||||||||||||| || |||| || ||||||||| ||| |||||||    
T  13942926 ggctcaggtccaactttctttgtagcaaacccagcctttactagaactttgagctttt 13942869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 133
Target Start/End: Original strand, 767234 - 767262
Alignment:
Q  105 gggcggagccacccccagctagcctgggc 133  Q
    |||||||||||||||||||||||||||||    
T  767234 gggcggagccacccccagctagcctgggc 767262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 17192651 - 17192603
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctg 296  Q
    |||||| |||||| ||||||||||| || || |||||||||||||||||    
T  17192651 tttaggatccgcaggaaagatatattcgcagaaaatgtgaaattatctg 17192603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 133
Target Start/End: Original strand, 37607389 - 37607417
Alignment:
Q  105 gggcggagccacccccagctagcctgggc 133  Q
    |||||||||||||||||||||||||||||    
T  37607389 gggcggagccacccccagctagcctgggc 37607417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 133
Target Start/End: Complemental strand, 43228824 - 43228796
Alignment:
Q  105 gggcggagccacccccagctagcctgggc 133  Q
    |||||||||||||||||||||||||||||    
T  43228824 gggcggagccacccccagctagcctgggc 43228796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 174; Significance: 2e-93; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 131 - 370
Target Start/End: Original strand, 10715627 - 10715868
Alignment:
Q  131 ggctcagctccaactttctttgta-gtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcc 229  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||    
T  10715627 ggctcggctccaactttctttgtaagcaagcccaaccattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaggaaacacattgcc 10715726  T
Q  230 -tgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaag 328  Q
     |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  10715727 ctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaag 10715826  T
Q  329 taacgttttgcaataaattttttgcccagactctataaaata 370  Q
    ||| ||||||| ||||||||||||||||| ||||||||||||    
T  10715827 taatgttttgcgataaattttttgcccaggctctataaaata 10715868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 131 - 370
Target Start/End: Original strand, 10929397 - 10929638
Alignment:
Q  131 ggctcagctccaactttctttgta-gtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcc 229  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||    
T  10929397 ggctcggctccaactttctttgtaagcaagcccaaccattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaggaaacacattgcc 10929496  T
Q  230 -tgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaag 328  Q
     |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  10929497 ctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaag 10929596  T
Q  329 taacgttttgcaataaattttttgcccagactctataaaata 370  Q
    ||| ||||||| ||||||||||||||||| ||||||||||||    
T  10929597 taatgttttgcgataaattttttgcccaggctctataaaata 10929638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 4552158 - 4552396
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||   |||||||    
T  4552158 ggctcagctccaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcggatttgtgtgtaaattccgcaggaaatgtatttcct 4552257  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||    
T  4552258 gcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattatttgtaggaaggaagta 4552357  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  4552358 acgttttgcgataaattttttgcccagactctataaaat 4552396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 2017580 - 2017342
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    |||| |||||||||||||||||||| |||| | ||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||   ||||||     
T  2017580 ggcttagctccaactttctttgtagcaagctctaccattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaggaaatgtatttccc 2017481  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  2017480 gcagattttgccaagtatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgtaggaaatgtgaaattattcgtaggaaggaagta 2017381  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| ||||||||||||||||| || ||||||||    
T  2017380 acgttttgcgataaattttttgcccaggctttataaaat 2017342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 100 - 369
Target Start/End: Original strand, 46645531 - 46645814
Alignment:
Q  100 atgcagggcggagccacccccagctag--cctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggat 197  Q
    |||||||||||||||||||||||||||  ||  |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  46645531 atgcagggcggagccacccccagctagtgcccaggctcagctccaacttcctttgtagcaagcccaaccattactagaatttttagctttttctgcggat 46645630  T
Q  198 ------------ttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgt 285  Q
                |||||||||||||| ||| |||||||||||| |||| |||||||||||  ||||||||||||| ||||||||||||||||| |||| |    
T  46645631 ttacctgcggatttttgtgtaaattctgcaggaaacacatttcatgcagattttgccaagagtttaggttccgcaggaaagatatatccgtagaaaatat 46645730  T
Q  286 gaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||| |  ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  46645731 gaaattatatacaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatttttttcccagactctataaaat 46645814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 40969197 - 40969435
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||| ||||||||||||||| ||| ||||||||||  |||||||||||||||| ||| |||||||||||||||||| ||| ||||||||||| ||    
T  40969197 ggctcagcttcaactttctttgtagcaagtccaaccattatgagaatttttagcttttcctgcggatttttgtgtaaattctgcaggaaacacattttct 40969296  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||| ||||||||||| ||| |||||||||    
T  40969297 gcagattttgtcaatgatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcagaaaatatgaaattattcgcagaaaggaagta 40969396  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| ||||||||||||||||  |||||||||||    
T  40969397 acgttttgcgataaattttttgcccaagctctataaaat 40969435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 137 - 369
Target Start/End: Original strand, 4728525 - 4728769
Alignment:
Q  137 gctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacgaaacaca 224  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| ||||||            ||| |||||||||||| ||||||||    
T  4728525 gctccaactttctttgtagcaagccaaaccattactagaatttttagcttttcctgcggatttacctgcggatttttgagtaaattccgcaggaaacaca 4728624  T
Q  225 tttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaag 324  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| || |||||||||||||||  |||||||    
T  4728625 tttcctgcagattttgccaaggatttaggttccgcaggaaagatatatctgtaggaaatgtgaaattatctgcagaaaatgtgaaattatttgcaggaag 4728724  T
Q  325 gaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||    
T  4728725 gaagtaacgttttgcgataaattttttgcccaggctctataaaat 4728769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 2576132 - 2576383
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| | ||||            |||| ||||||||||| ||    
T  2576132 ggctcagctccaactttctttgtagcaagcccaaccattacaagaatttttagctttttctgcgaatttacttgcgaatttttgtataaattccgcagga 2576231  T
Q  219 aacacatttcctgcatatttt-gccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattca 317  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||| |||| ||||||||||||||||||| |||||||||| || |||| |||||||| ||     
T  2576232 aacacatttcctgcagatttttgccaaggatgtaggttccgcaggaaatatatatccgtaggaaatgtaaaattatctgcagaaaatatgaaattaatcg 2576331  T
Q  318 caggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||| |||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  2576332 cagaaaggaagtaacgttttgcgataatttttttgcccagactttataaaat 2576383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 131 - 293
Target Start/End: Original strand, 31364108 - 31364270
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||| ||||||||||||||||||| ||  |||||||||||||||| |||||| |||| ||| |||||||||||||||||||||| ||||||||||||||    
T  31364108 ggctcggctccaactttctttgtagcaaatccaaccattactagaaattttagtttttcctgcggatttttgtgtaaattccgcaggaaacacatttcct 31364207  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  31364208 gcagattttgccaaggatttaggttccgcagaaaagatatatccgtaggaaatgtgaaattat 31364270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 131 - 257
Target Start/End: Complemental strand, 41972580 - 41972454
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||    
T  41972580 ggctcagctccaactttctttgtagcaagccgaaccattactagaacttttagcttttcctgcggatttttgtgtaaattccgcaggaaacacatttcct 41972481  T
Q  231 gcatattttgccaaggatttaggttcc 257  Q
    ||| ||||||||||||||| |||||||    
T  41972480 gcagattttgccaaggattaaggttcc 41972454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 253 - 369
Target Start/End: Original strand, 32005978 - 32006094
Alignment:
Q  253 gttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttg 352  Q
    |||||||| ||||||||||||||||||||||||||| |||| || |||||||||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  32005978 gttccgcaggaaagatatatccgtaggaaatgtgaatttatttgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttg 32006077  T
Q  353 cccagactctataaaat 369  Q
    |||||||||||||||||    
T  32006078 cccagactctataaaat 32006094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 52373711 - 52373965
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||| |||||||| ||  ||||||||||| ||||| |||||||||  |||||||||||||||||||||  ||||  ||||| |    
T  52373711 ggctcagctccaactttctttatagtaagctcagtcattactagaacttttaactttttctgcagatttttgtgtaaattccgcagaaaacgtatttctt 52373810  T
Q  231 gcatattttgccaaggatttaggttcc--------gcaaga----aagatat----atccgtaggaaatgtgaaattatctgtaggaaatgtgaaattat 314  Q
    ||| |||||| || |||||||||||||        | || |    | ||| |    ||||| | |||||||||||||||| | |||||||||||||||||    
T  52373811 gcagattttgtcagggatttaggttcccaggtgaggtaataccttaggattttaggatccgcatgaaatgtgaaattatccgcaggaaatgtgaaattat 52373910  T
Q  315 tcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    || |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  52373911 tcgcaggaaggaagtaacgttttgcgataaattttttgcacagactctataaaat 52373965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 144 - 293
Target Start/End: Original strand, 10058511 - 10058672
Alignment:
Q  144 ctttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacgaaacacatttcctg 231  Q
    |||||||||||| ||||||||||||||| |||||||||||||||| | | ||||||            |||||||||||||||| ||||||||||||| |    
T  10058511 ctttctttgtagcaagcccaaccattacgagaatttttagcttttcccgcggatttacctggggaattttgtgtaaattccgcaggaaacacatttccag 10058610  T
Q  232 catattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10058611 cagattttaccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattat 10058672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 50383861 - 50384084
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| ||| |||| |||| |||||||  ||| ||||||||||||||    
T  50383861 ggctcagctccaactttctttgtagcaagcccagccattactagaacttttagcttttcctgcggatgtttgcgtaaattttgcaggaaacacatttcct 50383960  T
Q  231 gcatattttgccaagga---tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaa 327  Q
    ||| |||||||||||||   ||||||                 |||||||||||||||||||| ||| | ||||| | | ||||||||| ||||||||||    
T  50383961 gcagattttgccaaggatattttagg-----------------atccgtaggaaatgtgaaataatccgcaggaattataaaattattcgcaggaaggaa 50384043  T
Q  328 gtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||   |||||||||||| |||||||||||    
T  50384044 gtaacgttttgcaat-ttttttttgcccaggctctataaaat 50384084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 270 - 369
Target Start/End: Complemental strand, 43003188 - 43003089
Alignment:
Q  270 tatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  43003188 tatcggtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaagaagtaacgttctgcaataaattttttgtccagactctataaaat 43003089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 8901776 - 8901897
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| ||||||| |||||  ||||| ||||| ||||| |||  |||||||||||||| |||||| ||||||||||||||    
T  8901776 ggctcagctccaactttctttgtagaaagcccagccatttttagaacttttaacttttcctgcagatttttgtgtaaactccgcaggaaacacatttcct 8901875  T
Q  231 gcatattttgccaaggatttag 252  Q
    ||| ||||||||||||||||||    
T  8901876 gcagattttgccaaggatttag 8901897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 138 - 257
Target Start/End: Original strand, 50099820 - 50099939
Alignment:
Q  138 ctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgcatatt 237  Q
    ||||||||||||||||||||||  ||||||||||||||  ||||||||||||||| |||||||||||||||||||| | ||||  ||||| ||||| |||    
T  50099820 ctccaactttctttgtagtaagttcaaccattactagagcttttagctttttctgcggatttttgtgtaaattccgtaggaaattcattttctgcaaatt 50099919  T
Q  238 ttgccaaggatttaggttcc 257  Q
    |||| |||||||||||||||    
T  50099920 ttgctaaggatttaggttcc 50099939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 131 - 257
Target Start/End: Original strand, 49745012 - 49745138
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||| ||  ||| | | |||||||||||| ||||| ||||| |||| ||||||||||||||||||| | ||||||||||| ||    
T  49745012 ggctcagctccaactttctttataacaagtctagccattactagaagttttaccttttcctgtagatttttgtgtaaattccgtaggaaacacattttct 49745111  T
Q  231 gcatattttgccaaggatttaggttcc 257  Q
    ||| |||||||||||||||||||||||    
T  49745112 gcagattttgccaaggatttaggttcc 49745138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 2521924 - 2521803
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaatt 347  Q
    |||||| |||||| |||||| ||||||| || |||||||| |||||| | ||||||||||||||||||| |||||||||||||||||||| | |||||||    
T  2521924 tttaggatccgcaggaaagacatatccgcagaaaatgtgatattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttacgataaatt 2521825  T
Q  348 ttttgcccagactctataaaat 369  Q
    |||||||||   ||||||||||    
T  2521824 ttttgcccatgttctataaaat 2521803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 131 - 257
Target Start/End: Original strand, 25237537 - 25237675
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||||||||||||||||||||||||||| |||  ||||||||||| ||||||| ||||||| ||||||            |||||||||||||||| ||    
T  25237537 ggctcagctccaactttctttgtagtaagtccagtcattactagaacttttagcgttttctgcggatttacctgcggaattttgtgtaaattccgcagga 25237636  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  25237637 aacacatttcctgcagattttgccaaggatttaggttcc 25237675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 32005887 - 32005969
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccg 213  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  32005887 ggctcagctccaactttctttgtagcaagccctaccattattagaatttttagcttttcctgcggatttttgtgtaaattccg 32005969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 9003529 - 9003766
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt-----------ttgtgtaaattccgcacgaa 219  Q
    ||||||||||||| ||||||||||| |||||||  |||||| |||| ||||| ||||||||  ||||||           || ||||||||||||| |||    
T  9003529 ggctcagctccaattttctttgtagcaagcccagtcattacaagaacttttaactttttcttcggatttacctgcggattttatgtaaattccgcaggaa 9003628  T
Q  220 acacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcaca 319  Q
    |||||||||||||| |||||||| |||||||     | |||     |||   |||| ||||||||||||||||||  |||||||||||||||||||| ||    
T  9003629 acacatttcctgcagattttgcctaggatttc----ctgca-----gat---tccgcaggaaatgtgaaattatccataggaaatgtgaaattattcgca 9003716  T
Q  320 ggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
     |||||||||||| |||||| |||| ||||||| |||| |||||||||||    
T  9003717 agaaggaagtaacattttgcgataatttttttgtccaggctctataaaat 9003766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 277 - 363
Target Start/End: Original strand, 50099989 - 50100075
Alignment:
Q  277 aggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactcta 363  Q
    |||||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||||| ||||||||||| |||| ||||||    
T  50099989 aggaaatgtgaaattatccgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttacccaaactcta 50100075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 1585682 - 1585763
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattcc 212  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  1585682 ggctcagcttcaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcagatttttgtgtaaattcc 1585763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 9694060 - 9694191
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggat------------ttttgtgtaaattccgcacga 218  Q
    ||||||||||||| |||||||||||||||| || |||||||||||| ||||| ||||||||| ||||            |||| ||||||||||||| ||    
T  9694060 ggctcagctccaattttctttgtagtaagctcagccattactagaacttttaactttttctgcggatttatttgcggaattttatgtaaattccgcagga 9694159  T
Q  219 aacacatttcctgcatattttgccaaggattt 250  Q
    ||||||||||||||| |||||||| |||||||    
T  9694160 aacacatttcctgcagattttgcctaggattt 9694191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 41972415 - 41972347
Alignment:
Q  301 aaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||| | ||||||||    
T  41972415 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgaccagattttataaaat 41972347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 1585777 - 1585864
Alignment:
Q  266 gatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgc 353  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||  | |||| ||| |||||||||| |||| ||||||||    
T  1585777 gatatatccgtaggaaatgtaaatttatctgcaggaaatgtgaaattattcgtacgaagaaagcaacgttttgcgataatttttttgc 1585864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 14044464 - 14044535
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| |||| ||||||||||| ||||||||||||    
T  14044464 aggaaatgtgaaattattctcaggaaggaggtaacattttgcgataatttttttgcccatactctataaaat 14044535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 296 - 369
Target Start/End: Complemental strand, 11827026 - 11826953
Alignment:
Q  296 gtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||| ||||||||||||||| |||| | |||| ||||||||| || |||||||||||    
T  11827026 gtaggaaatgtgaaattattcgcaggaaggaagtaacattttacgataatttttttgcctaggctctataaaat 11826953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 32828188 - 32828245
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt 188  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||    
T  32828188 ggctcagctccaattttctttgtagtaatcccaaccattactagaacttttagctttt 32828245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 11827169 - 11827101
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt 199  Q
    ||||||||||||| ||||||||||||||| | | |||||||||||| ||||||||||||||| ||||||    
T  11827169 ggctcagctccaattttctttgtagtaagtctagccattactagaacttttagctttttctgcggattt 11827101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 10058676 - 10058727
Alignment:
Q  318 caggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  10058676 caggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaat 10058727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 31929111 - 31929048
Alignment:
Q  194 ggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    |||||||  ||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  31929111 ggattttattgtaaattctgcaagaaacacatttcctgcaaattttgccaaggatttaggttcc 31929048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 49745168 - 49745263
Alignment:
Q  271 atccgtaggaaatgtgaaattatctgtaggaaa-tgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctata 365  Q
    ||||| |||||||||||||||||| | || ||| ||| ||||||||| ||||||||| ||||| |||| | ||||||||||| |||||||||||||    
T  49745168 atccgcaggaaatgtgaaattatccgcagaaaaatgtaaaattattcgcaggaaggacgtaacattttacgataaattttttccccagactctata 49745263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 133 - 250
Target Start/End: Original strand, 14044320 - 14044449
Alignment:
Q  133 ctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacgaaa 220  Q
    ||||||||||| ||||||||||| ||||| | ||||||| | |||||||||||||| ||| ||||||            || ||||||||||||| ||||    
T  14044320 ctcagctccaattttctttgtagcaagccaagccattacgaaaatttttagcttttcctgcggatttacctgcgaatttttatgtaaattccgcaggaaa 14044419  T
Q  221 cacatttcctgcatattttgccaaggattt 250  Q
    ||||||||||||| |||||||| |||||||    
T  14044420 cacatttcctgcagattttgcctaggattt 14044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 2522011 - 2521948
Alignment:
Q  194 ggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    ||||||||||||||| |||||| ||||||||||||||| | |||||  ||||||||||||||||    
T  2522011 ggatttttgtgtaaagtccgcaggaaacacatttcctgtagattttatcaaggatttaggttcc 2521948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 31364274 - 31364325
Alignment:
Q  318 caggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  31364274 caggaaggaagtaacgttttgcgataaattttttgcccatgctctataaaat 31364325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 15034615 - 15034559
Alignment:
Q  132 gctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt 188  Q
    |||||||| ||||||||||||||  |||||||||||||||||||| |||| ||||||    
T  15034615 gctcagcttcaactttctttgtaacaagcccaaccattactagaacttttcgctttt 15034559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 338
Target Start/End: Original strand, 25237728 - 25237768
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttg 338  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  25237728 aggaaatgtgaaattattcgcaggaaggaagtaacgttttg 25237768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 36947554 - 36947617
Alignment:
Q  194 ggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    |||||||||| ||||||| ||| |||||| |||||||||  ||||||||||| |||||||||||    
T  36947554 ggatttttgtataaattctgcaggaaacatatttcctgcggattttgccaagaatttaggttcc 36947617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 32828283 - 32828354
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| ||||||||  ||||||||||||||  |||||  |||| |||||||||||| | |||||||||    
T  32828283 aggaaatgtaaaattatttgcaggaaggaagtaatattttgtgataatttttttgcccaggccctataaaat 32828354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 43003208 - 43003165
Alignment:
Q  271 atccgtaggaaatgtgaaattatctgtaggaaatgtgaaattat 314  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||    
T  43003208 atccgcaggaaatgttaaattatcggtaggaaatgtgaaattat 43003165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 6017101 - 6017158
Alignment:
Q  143 actttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttt 200  Q
    ||||||||||||| |||||| || |||||||||| || | |||||||||| |||||||    
T  6017101 actttctttgtagcaagcccgactattactagaacttgtcgctttttctgcggatttt 6017158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 9694206 - 9694270
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactcta 363  Q
    ||||||||| ||||||||| || ||||||| |||| |||||| |||| |||||||||||| |||||    
T  9694206 aggaaatgtcaaattattcgcaagaaggaaataacattttgcgataa-ttttttgcccaggctcta 9694270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 1e-91; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 25007436 - 25007674
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||   |||||||    
T  25007436 ggctcagctccaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaagaaatgtatttcct 25007535  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||||    
T  25007536 gcagattttgccaaggatttaggttctgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaaggaagta 25007635  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  25007636 acgttttgcgataaattttttgcccaggctctataaaat 25007674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 25011679 - 25011442
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| ||    
T  25011679 ggctcagctccaactttctttgtagcaagcccaaccattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaggaaacacattttct 25011580  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||  ||||||||| || ||||||||||    
T  25011579 gcagattttgccaaggatttaggttccgc-agaaagatatatccgtaggaaatgtgaaattatctgcagaaaatgcaaaattattcgcatgaaggaagta 25011481  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| |||| ||||||||||||| ||||||||||    
T  25011480 acgttttgcgataatttttttgcccagattctataaaat 25011442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 37154133 - 37153895
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||   |||||||    
T  37154133 ggctcagctccaactttctttgtaggaagctctaccattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaggaaatgtatttcct 37154034  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||||    
T  37154033 gcagattttgccaaggatttaggttccacaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaaggaagta 37153934  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  37153933 acgttttgcgataaattttttgcccaggctctataaaat 37153895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 27584156 - 27583922
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||    
T  27584156 ggctcggctccaactttctttgtagcaagccaaaccattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaggaaacacatttcct 27584057  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    | ||||||||    
T  27584056 gcagattttgccaaggatttaggttccccaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattc----gcaggaagta 27583961  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| ||||||||||||| ||| |||||||||||    
T  27583960 acgttttgcgataaattttttgctcaggctctataaaat 27583922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 44305384 - 44305622
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| ||| |||||||||||||||||||||| ||||   |||||||    
T  44305384 ggctcagctccaactttctttgtaggaagccctacaattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaggaaatgtatttcct 44305483  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||||    
T  44305484 gcagattttgccaaggatttaggttccacaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaaggaagta 44305583  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| |||| |||||||||||| |||||||||||    
T  44305584 acgttttgcgataatttttttgcccaggctctataaaat 44305622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 14727290 - 14727540
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||||            |||||||||||||||| ||    
T  14727290 ggctcagctccaactttctttgtagcaagtccaaccattactagaatttttagcttttcctgcggatttacctgcggagttttgtgtaaattccgcagga 14727389  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcac 318  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |    
T  14727390 aacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatctgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgc 14727489  T
Q  319 aggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||||||||    
T  14727490 aggaaggaagtaacgttttgcgataatttttttgcccaggctctataaaat 14727540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 27460668 - 27460888
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||||||||| | ||||||||||||||    
T  27460668 ggctcagctccaactttctttgtagcaagcccaaccattactagaatttttagcttttcttgcggatttttgtgtaaattccgaaggaaacacatttcct 27460767  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| ||||||||||||||||||||                 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  27460768 gcagattttgccaaggatttaggt-----------------tccgtaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagta 27460850  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    | ||||||| ||||||||||| ||||| |||||||||||    
T  27460851 atgttttgcgataaatttttt-cccaggctctataaaat 27460888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 225 - 369
Target Start/End: Complemental strand, 1428468 - 1428324
Alignment:
Q  225 tttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaag 324  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| || ||||||||||||||||  ||||||    
T  1428468 tttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatctatctgcagaaaatgtgaaattattcgtaggaag 1428369  T
Q  325 gaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||  |||||||||||||||| |||||||||||    
T  1428368 gaagtaacgttttgcggtaaattttttgcccaggctctataaaat 1428324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 131 - 293
Target Start/End: Complemental strand, 31844775 - 31844601
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    |||||| |||||||||||||| ||| || ||||||||||||||||| ||||||||||| ||  ||||||            |||||||||||||||| ||    
T  31844775 ggctcaactccaactttctttctagcaaacccaaccattactagaaattttagcttttcctacggatttacctgcagatttttgtgtaaattccgcagga 31844676  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31844675 aacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattat 31844601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 131 - 293
Target Start/End: Original strand, 8239251 - 8239427
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgt------------ggatttttgtgtaaattccgcacga 218  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||             |||||||||||||||||||||| ||    
T  8239251 ggctcagctccaactttctttgtagtaatccctaccattactagaatttttagcttttcctgcagatttacctgcggatttttgtgtaaattccgcagga 8239350  T
Q  219 aacacat--ttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    || | ||  |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8239351 aatatatatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattat 8239427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 131 - 302
Target Start/End: Original strand, 6331646 - 6331829
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtgg------------atttttgtgtaaattccgcacga 218  Q
    ||||| ||||||||||||| ||||| || | ||||||||||||||| ||||||||||| ||| ||            |||||||||||||||||||| ||    
T  6331646 ggctcggctccaactttctatgtagcaaactcaaccattactagaaattttagcttttcctgcgggtttacctccggatttttgtgtaaattccgcagga 6331745  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaa 302  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||    
T  6331746 aacacatttcctacagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatttgaaggaa 6331829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 131 - 257
Target Start/End: Original strand, 24646026 - 24646151
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    |||||| |||||||||||||||||| || | ||||||||||||||| ||||||||||| ||||||||||||||||| |||||| | ||||||||||||||    
T  24646026 ggctcaactccaactttctttgtagcaa-ctcaaccattactagaacttttagcttttcctgtggatttttgtgtacattccgtaggaaacacatttcct 24646124  T
Q  231 gcatattttgccaaggatttaggttcc 257  Q
    ||| |||||||||||||||||||||||    
T  24646125 gcagattttgccaaggatttaggttcc 24646151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 105 - 257
Target Start/End: Original strand, 9526991 - 9527143
Alignment:
Q  105 gggcggagccacccccagctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtg 204  Q
    ||||||||||||||||   | |||  ||| ||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| ||| ||||||| |||    
T  9526991 gggcggagccaccccccagttgcccaggcccagctccaactttctttgtagcaagcccagccattactagaacttttagcttttcctgcggattttggtg 9527090  T
Q  205 taaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    |||||| | || ||||||||| ||||||| |||||||||||||||||||||||    
T  9527091 taaatttcacaggaaacacatctcctgcagattttgccaaggatttaggttcc 9527143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 44239002 - 44238750
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtgga-tttttgtgtaaattccgcacgaaacacatttcc 229  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||  || ||| ||||| ||||||||| ||| ||||||||||||     
T  44239002 ggctcagctccaactttctttgtagaaagcccagccattactagaaattttagcttttcttgcggattttttttgtaaattctgcaggaaacacatttct 44238903  T
Q  230 tgcatattttgccaaggatttaggttcc-----------------gcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaatt 312  Q
    || | |||||||||||||||||||||||                 |||||||||||||||||| | |||||||||||||||| | ||||||||||||| |    
T  44238902 tgtagattttgccaaggatttaggttcctagaggtagtaggatctgcaagaaagatatatccgcatgaaatgtgaaattatccgcaggaaatgtgaaaat 44238803  T
Q  313 attcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||    | | |||||||| |||| | |||||| |||| | |||||||||||||||    
T  44238802 attc----gcatgaagtaacattttacgataaatattttacacagactctataaaat 44238750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 4642063 - 4641942
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaatt 347  Q
    |||||| |||||| |||||||||||||| ||||||| |||||||||| | ||||||||||||||||||| |||||||||||||||||||||| ||  |||    
T  4642063 tttaggatccgcaggaaagatatatccgcaggaaatatgaaattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgattgatt 4641964  T
Q  348 ttttgcccagactctataaaat 369  Q
    |||||| | | |||||||||||    
T  4641963 ttttgcacgggctctataaaat 4641942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 126 - 369
Target Start/End: Complemental strand, 33469089 - 33468876
Alignment:
Q  126 gcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacat 225  Q
    |||| ||||||||||||||||||||| ||| ||   ||||||||||||||| ||||||||||| ||| ||||||           ||| | |||||||||    
T  33469089 gcctaggctcagctccaactttctttatagcaaattcaaccattactagaaattttagcttttcctgcggatttac---------ccgtaggaaacacat 33468999  T
Q  226 ttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaagg 325  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||||                     ||||||||||||||||||||||| ||||||||    
T  33468998 ttcctgcaaattttgtcaaggatttaggttccgcaggaaagatatat---------------------ctgtaggaaatgtgaaattattcgcaggaagg 33468920  T
Q  326 aagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||| ||||||||||||||||| |||||||||||    
T  33468919 aagtaacgttttgcgataaattttttgcccaggctctataaaat 33468876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 105 - 252
Target Start/End: Complemental strand, 48940598 - 48940438
Alignment:
Q  105 gggcggagccac-ccccagctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt------------tct 191  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| | |||||||||||| |||||||||||            | |    
T  48940598 gggcggagccactccccagctagcctgggctcagctccaacattctttgtagcaagccaagccattactagaacttttagcttttcctgcggatttattt 48940499  T
Q  192 gtggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttag 252  Q
    | |||||||||||||||||||||| |||||||||||| |||| |||||| |||||||||||    
T  48940498 gcggatttttgtgtaaattccgcaggaaacacatttcatgcagattttgtcaaggatttag 48940438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 369
Target Start/End: Original strand, 4774085 - 4774182
Alignment:
Q  272 tccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||| |||||||||||||||||| | | ||||||||||||||||| ||||||| ||||||| |||||| |||| ||||||||||||||||||||||||    
T  4774085 tccgcaggaaatgtgaaattatccgcaagaaatgtgaaattattcgcaggaagaaagtaacattttgcgataatttttttgcccagactctataaaat 4774182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 369
Target Start/End: Complemental strand, 31844619 - 31844546
Alignment:
Q  296 gtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  31844619 gtaggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataaattttttgcccagactctataaaat 31844546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 255
Target Start/End: Complemental strand, 4642213 - 4642089
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||| ||||||||||||| |||  || |||||||||||| ||||||||||| ||| |||||||| |||||||| | || |||| ||||||| |    
T  4642213 ggctcagctccgactttctttgtagcaagttcagccattactagaacttttagcttttcctgcggatttttatgtaaatttcacaggaaatacatttctt 4642114  T
Q  231 gcatattttgccaaggatttaggtt 255  Q
    ||| |||||| ||||||||||||||    
T  4642113 gcagattttgtcaaggatttaggtt 4642089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 291 - 369
Target Start/End: Original strand, 34459253 - 34459331
Alignment:
Q  291 tatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  34459253 tatctgtaggaaatgtgaaattattcgtgggaaggaagtaacgttttgtgataaattttttgcccagactctataaaat 34459331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 4773981 - 4774081
Alignment:
Q  133 ctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgc 232  Q
    |||| |||||| ||| ||||||| ||||||| |||||||||||| ||||||||||| ||| |||| ||| ||||||||||||| ||||||||||||||||    
T  4773981 ctcaactccaattttttttgtagcaagcccagccattactagaacttttagcttttcctgcggatatttatgtaaattccgcaggaaacacatttcctgc 4774080  T
Q  233 a 233  Q
    |    
T  4774081 a 4774081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 6802231 - 6802113
Alignment:
Q  143 actttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgcat----attt 238  Q
    ||||||||||||| |||| || |||||||||||| || | |||||| ||| |||||||| |||||||||| || |||||||||||||||| |    ||||    
T  6802231 actttctttgtagcaagctcagccattactagaacttctcgcttttcctgcggatttttctgtaaattccacaggaaacacatttcctgcctgcggattt 6802132  T
Q  239 tgccaaggatttaggttcc 257  Q
    |||||||||||||||||||    
T  6802131 tgccaaggatttaggttcc 6802113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 296 - 369
Target Start/End: Original strand, 8239409 - 8239482
Alignment:
Q  296 gtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||  ||||||||||    
T  8239409 gtaggaaatgtgaaattattcataggaaggaagtaacgttttgcgataaattttttgcctaggttctataaaat 8239482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 369
Target Start/End: Original strand, 9527195 - 9527267
Alignment:
Q  297 taggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||| ||||||||||||    
T  9527195 taggaaatgtgaaattattcgcaggaagacagtaacgttttgcgataaattttttgcccatactctataaaat 9527267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 49898527 - 49898594
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctata 365  Q
    ||||||||||||||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  49898527 aggaaatgtgaaattattcgcaggaaggacgtaacattttgcgataaattttttgcccagactctata 49898594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 24745443 - 24745508
Alignment:
Q  190 ctgtggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggtt 255  Q
    |||||| ||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||    
T  24745443 ctgtggttttttgtgtaaattctgcaggaaacacattttctgcagattttgccaaggatttaggtt 24745508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 1428520 - 1428466
Alignment:
Q  134 tcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt 188  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  1428520 tcagctccaactttctttgtagcaagccctaccattactagaatttttagttttt 1428466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 24646187 - 24646258
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||| ||||||||||| || |||||||||||| |||||  |||| |||||||||||| |||||||||||    
T  24646187 aggaaatttgaaattattcgcatgaaggaagtaacattttgagataatttttttgcccaggctctataaaat 24646258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 291 - 369
Target Start/End: Complemental strand, 6802067 - 6801989
Alignment:
Q  291 tatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||| |||||||||| |||||| | || | ||||| ||||||||||| |||||||||||| ||| ||||||||||||    
T  6802067 tatctgcaggaaatgtgcaattatccgcatgtaggaaataacgttttgcgataaattttttgtccaaactctataaaat 6801989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 48940402 - 48940328
Alignment:
Q  277 aggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaatttttt 351  Q
    |||||||||||||||||||| |  |||||||||||||||| ||| || ||| ||| |||||||||||| ||||||    
T  48940402 aggaaatgtgaaattatctgcaaaaaatgtgaaattattcgcagtaaagaaataaagttttgcaataattttttt 48940328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 34459231 - 34459276
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||    
T  34459231 tttaggatccgcaagaaagatatatctgtaggaaatgtgaaattat 34459276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 24745546 - 24745615
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||| || |||| ||||||| ||  || |||| ||||||||||||||||||||||||    
T  24745546 aggaaatgtgaaattattcgcatgaagaaagtaacatt--gcgataatttttttgcccagactctataaaat 24745615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 369
Target Start/End: Original strand, 6331825 - 6331875
Alignment:
Q  319 aggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||| ||||||||||||| ||  |||||||||||    
T  6331825 aggaaggaagtaacgttttgcgataaattttttgctcatgctctataaaat 6331875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 34459144 - 34459206
Alignment:
Q  194 ggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttc 256  Q
    ||||| ||||| || ||||| | ||||||||||||||||| ||||||||||||||||| ||||    
T  34459144 ggattgttgtggaatttccgtaggaaacacatttcctgcagattttgccaaggatttaagttc 34459206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 49898387 - 49898444
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt 188  Q
    ||||||||||||||||||||||||  |||  || |||||||||||| |||||||||||    
T  49898387 ggctcagctccaactttctttgtaacaagttcagccattactagaagttttagctttt 49898444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 49898498 - 49898543
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||    
T  49898498 tttaggatccgcaagaaagatatatccacaggaaatgtgaaattat 49898543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 374
Target Start/End: Original strand, 17875579 - 17875618
Alignment:
Q  335 tttgcaataaattttttgcccagactctataaaatatatg 374  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  17875579 tttgcgataaattttttgcccagactctataaaatttatg 17875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 9527167 - 9527212
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    |||||| ||| | |||||||||||||| ||||||||||||||||||    
T  9527167 tttaggatcctccagaaagatatatccataggaaatgtgaaattat 9527212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 4e-88; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 131 - 363
Target Start/End: Original strand, 44047562 - 44047794
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||   |||||||    
T  44047562 ggctcagctccaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaggaaatgtatttcct 44047661  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||| ||||||    
T  44047662 gcagattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattatttgtaggaaagaagta 44047761  T
Q  331 acgttttgcaataaattttttgcccagactcta 363  Q
    ||||||||| |||||||||||| ||||||||||    
T  44047762 acgttttgcgataaattttttgtccagactcta 44047794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 53651876 - 53652114
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||  ||||||||    
T  53651876 ggctcagctccaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaggaaatgcatttcct 53651975  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||| | |||    
T  53651976 gcagattttgccaaggatttaggttctgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaagaacgta 53652075  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    | ||||||| |||||||||||| ||||||||||||||||    
T  53652076 atgttttgcgataaattttttgtccagactctataaaat 53652114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 28311255 - 28311493
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||||||| |||| ||| |||||||||||||||||||||| ||||   |||||||    
T  28311255 ggctcagctccaactttctttgtaacaagccctaccattactagaatttttagtttttcctgcggatttttgtgtaaattccgcaggaaatgtatttcct 28311354  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    | | |||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||||    
T  28311355 gtagattttgccaaggatttaggttccgctggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaaggaagta 28311454  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    | ||||||| |||||||||||||||||||||||||||||    
T  28311455 atgttttgcgataaattttttgcccagactctataaaat 28311493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 14461043 - 14461281
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||||||||| ||||| ||| |||||||| ||||||||||||| ||||   || ||||    
T  14461043 ggctcagctccaattttctttgtagcaagccctaccattactagaatttttaacttttcctgcggatttttatgtaaattccgcaggaaatgtatgtcct 14461142  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||  ||||||||||||    
T  14461143 gcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtaaaattattcgtaggaaggaagta 14461242  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||  ||||||||||||||||| |||||||||||    
T  14461243 acgttttgtgataaattttttgcccaggctctataaaat 14461281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 118 - 369
Target Start/End: Original strand, 7500909 - 7501172
Alignment:
Q  118 cccagctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgt 205  Q
    ||||| |||||  ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||            ||||||    
T  7500909 cccaggtagcccaggctcggctccaactttctttgtagcaagcccaaccattactagaatttttagcttttcctgcggatttacatgcggatgtttgtgt 7501008  T
Q  206 aaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatg 305  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  7501009 aaattccgcaggaaacacatttcctacagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaatg 7501108  T
Q  306 tgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||| ||||||| |||||||||||||| |||||||||||  | || |||||||||||    
T  7501109 tgaaattattcgcaggaagtaagtaacgttttgcgataaattttttatcgaggctctataaaat 7501172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 105 - 369
Target Start/End: Original strand, 12909766 - 12910042
Alignment:
Q  105 gggcggagccaccccc-agctagcctgggc-----tcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatt 198  Q
    |||||||||||||||| |||||||||||||     |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| |||||    
T  12909766 gggcggagccaccccccagctagcctgggccaggctcagctccaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcggatt 12909865  T
Q  199 tttgtgtaaattccgcacgaaa--------cacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaat 290  Q
    ||||||||||||||||| ||||        |  |||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |    
T  12909866 tttgtgtaaattccgcaggaaatgtattttctgatttcctgcagattttgccaaagatttaggttccgcaggaaagatatatccgtaggaaatgtgaatt 12909965  T
Q  291 tatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||  ||||||||||||||||||  | |||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  12909966 tatctacaggaaatgtgaaattatt--cgggaaggaagtaacgatttgcgataaattttttgcccaggctctataaaat 12910042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 131 - 293
Target Start/End: Complemental strand, 25391967 - 25391805
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||   ||||| |    
T  25391967 ggctcagctccaactttcttcgtagcaagccctaccattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaagaaatgtatttctt 25391868  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25391867 gcaaattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattat 25391805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 225 - 369
Target Start/End: Complemental strand, 43700242 - 43700098
Alignment:
Q  225 tttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaag 324  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| ||     
T  43700242 tttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgttggaaatgtgaaattatctgcaggaaatgtgaaattattcgcagaaaa 43700143  T
Q  325 gaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||| ||| ||||||| ||||  |||||||||||    
T  43700142 gaagtaacgttttgcgatatattttttacccaagctctataaaat 43700098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 139 - 293
Target Start/End: Original strand, 37516616 - 37516782
Alignment:
Q  139 tccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacgaaacacatt 226  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||||            |||||||||||| ||| ||||||||||    
T  37516616 tccaactttctttgtagcaagtccaaccattactagaatttttagcttttcctgcggatttacctgcggaattttgtgtaaattctgcaggaaacacatt 37516715  T
Q  227 tcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  37516716 tcctgcagattttgccaaggatctaggttccgcaggaaagatatatccgtaggaaatgtgaaattat 37516782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 194 - 293
Target Start/End: Complemental strand, 26371101 - 26371002
Alignment:
Q  194 ggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26371101 ggatttttgtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaattat 26371002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 131 - 257
Target Start/End: Complemental strand, 33179267 - 33179141
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||| ||||||| ||| ||| |||||||||||| ||||||||||| ||| | |||||||||||||||||||| ||||||||||||||    
T  33179267 ggctcagctccaactttttttgtagcaagtccagccattactagaacttttagcttttcctgcgaatttttgtgtaaattccgcaggaaacacatttcct 33179168  T
Q  231 gcatattttgccaaggatttaggttcc 257  Q
    ||| |||||||||||||||||||||||    
T  33179167 gcagattttgccaaggatttaggttcc 33179141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 53068193 - 53068346
Alignment:
Q  104 agggcggagccaccccc-agctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttg 202  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||||||||||  ||| ||| |||||||||||| ||||| ||||| ||| |||||||||    
T  53068193 agggcggagccaccccccatctagcctgggc-cagctccaactttctttgtaacaagtccagccattactagaagttttaacttttcctgcggatttttg 53068291  T
Q  203 tgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    |||||||||| || ||||||||||||||||| ||||||||||| |||||||||||    
T  53068292 tgtaaattccacaggaaacacatttcctgcagattttgccaagaatttaggttcc 53068346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 257 - 369
Target Start/End: Complemental strand, 33179109 - 33178997
Alignment:
Q  257 cgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgccca 356  Q
    |||| |||||||||||||| || ||||||||||||||||| || |||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||    
T  33179109 cgcaggaaagatatatccgcagaaaatgtgaaattatctgcagaaaatgtgaaattattcgcaggaatgaagtaacgttttgcgataaattttttgccca 33179010  T
Q  357 gactctataaaat 369  Q
    |||||||||||||    
T  33179009 gactctataaaat 33178997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 53987842 - 53987961
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||| ||| |||||||||||| ||| ||||||||||||||| ||||||||||| ||| |||||||| ||||||||||||| ||||||||||||||    
T  53987842 ggctcagcttcaattttctttgtagtcagctcaaccattactagaacttttagcttttcctgcggatttttatgtaaattccgcaggaaacacatttcct 53987941  T
Q  231 gcatattttgccaaggattt 250  Q
    ||| |||||||| |||||||    
T  53987942 gcagattttgcctaggattt 53987961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 271 - 369
Target Start/End: Complemental strand, 41218358 - 41218260
Alignment:
Q  271 atccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  41218358 atccgcaggaaatgtaaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcctagactctataaaat 41218260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 296 - 369
Target Start/End: Complemental strand, 26371020 - 26370947
Alignment:
Q  296 gtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26371020 gtaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaat 26370947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 250
Target Start/End: Original strand, 9600329 - 9600447
Alignment:
Q  132 gctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctg 231  Q
    |||||||||| | |||||||||||||| |||| |||||||||||| |||| |||||| ||| |||||||| ||||||||| ||| |||||||||||||||    
T  9600329 gctcagctcctattttctttgtagtaatcccagccattactagaacttttggcttttcctgcggatttttatgtaaattctgcaggaaacacatttcctg 9600428  T
Q  232 catattttgccaaggattt 250  Q
    || |||||||  |||||||    
T  9600429 cagattttgcttaggattt 9600447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 44625676 - 44625773
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttc 228  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||  ||||||||||||||||| | | ||||||||||||    
T  44625676 ggctcggctccaactttctttgtagcaagcccaactattactagaatttttagcttttcctgcagatttttgtgtaaattctggaggaaacacatttc 44625773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 53987976 - 53988048
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaa-ttttttgcccagactctataaaat 369  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||| |||||||||||||    
T  53987976 aggaaatgtgaaattattcgcaggaaggaagtaacattttgcaataaatttttttgcccggactctataaaat 53988048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 43700297 - 43700240
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt 188  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43700297 ggctcggctccaactttctttgtagcaagcccaaccattactagaatttttagctttt 43700240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 131 - 256
Target Start/End: Complemental strand, 41218526 - 41218389
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||||||||| |||||| |||||| ||||||| |||||||||||| ||||||||||| ||| ||||||            |||| ||||||||||| ||    
T  41218526 ggctcagctccgactttccttgtagcaagcccagccattactagaacttttagcttttcctgcggatttacttgcgcatttttgtctaaattccgcagga 41218427  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttc 256  Q
    ||||||||||||||  ||||||||||| ||||||||||    
T  41218426 aacacatttcctgccgattttgccaagaatttaggttc 41218389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 296 - 369
Target Start/End: Complemental strand, 25391823 - 25391750
Alignment:
Q  296 gtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||||||||  | ||||||||||| ||||||| ||||||||||||||||  |||||||||||    
T  25391823 gtaggaaatgtgaaattattcgtaagaaggaagtaatgttttgcgataaattttttgcccaagctctataaaat 25391750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 38239483 - 38239555
Alignment:
Q  183 gctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggtt 255  Q
    ||||||| |||||||||| |||||||||| ||| ||||||||||| ||||  |||||||||||||||||||||    
T  38239483 gctttttttgtggattttagtgtaaattctgcaggaaacacattttctgcggattttgccaaggatttaggtt 38239555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 37516786 - 37516837
Alignment:
Q  318 caggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  37516786 caggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaat 37516837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 369
Target Start/End: Original strand, 26278473 - 26278546
Alignment:
Q  296 gtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||| || |||||||||| | |||||| |||| ||||||||| | ||||||||||||    
T  26278473 gtaggaaatgtgaaattattcgcaagaaggaagtatcattttgcgataatttttttgcctaaactctataaaat 26278546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 26278329 - 26278460
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt------------tctgtggatttttgtgtaaattccgcacga 218  Q
    ||||||||||||| |||||||| || ||||| | ||||||||||||||||||||||||             ||  |||||||| ||||||||||| | ||    
T  26278329 ggctcagctccaattttctttggagcaagcctagccattactagaatttttagcttttcatgcggatttacctacggatttttatgtaaattccggagga 26278428  T
Q  219 aacacatttcctgcatattttgccaaggattt 250  Q
    ||||||||||||||| |||||||| |||||||    
T  26278429 aacacatttcctgcagattttgcctaggattt 26278460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 35077267 - 35077321
Alignment:
Q  196 atttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggattt 250  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  35077267 atttttatgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 35077321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 47511786 - 47511667
Alignment:
Q  132 gctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctg 231  Q
    |||||||| | | ||||||||||  ||| ||| ||||||||||||  ||| |||||| ||| |||||||||| ||||||  | | |||||||||||||||    
T  47511786 gctcagcttctaatttctttgtaacaagtccagccattactagaacctttcgcttttcctgcggatttttgtataaattttgaaggaaacacatttcctg 47511687  T
Q  232 catattttgccaaggattta 251  Q
    |  ||||||| || ||||||    
T  47511686 cggattttgctaaagattta 47511667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 26371181 - 26371115
Alignment:
Q  126 gcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctg 192  Q
    |||| ||||| ||||||||||| ||| ||| ||  |||||||||||||||| ||||||| |||||||    
T  26371181 gcctaggctcggctccaactttatttttagcaaatccaaccattactagaaattttagcattttctg 26371115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 41358595 - 41358541
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttg 352  Q
    |||||||||| |||||| | |||||||||| ||||||||||| |||| |||||||    
T  41358595 aggaaatgtgcaattatccgcaggaaggaaataacgttttgcgataatttttttg 41358541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 24989461 - 24989412
Alignment:
Q  105 gggcggagccacccccagctagcctgggctcagctccaactttctttgta 154  Q
    |||||||| ||||||||||||||||||||| ||| |  ||||||||||||    
T  24989461 gggcggagacacccccagctagcctgggcttagcccatactttctttgta 24989412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 43447619 - 43447660
Alignment:
Q  216 cgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    |||||||| ||||||||| |||||||||||||||||| ||||    
T  43447619 cgaaacacgtttcctgcagattttgccaaggatttagcttcc 43447660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 4e-85; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 28928031 - 28928270
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcc- 229  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| ||| |||||||||||||||||| |||||||||||||     
T  28928031 ggctcggctccaactttctttgtagcaagcctaaccattactagaatttttagcttttcctgcggagttttgtgtaaattccgcaggaaacacatttccc 28928130  T
Q  230 tgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagt 329  Q
    |||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| || |||||||||||||||| ||||||||||||    
T  28928131 tgcagattttgccaaggatttaggttccgcaggaaagatatatctgtaggaaatgtgaaattatctgcagaaaatgtgaaattattcgcaggaaggaagt 28928230  T
Q  330 aacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||| |||| | ||||||||||| |||||||||| ||||||    
T  28928231 aactttttacgataaattttttacccagactctttaaaat 28928270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 36406644 - 36406394
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||| ||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||            |||||||||||||| | ||    
T  36406644 ggctcggctccaactttctttgtagcaagcccaaacattactataatttttagcttttcctgtggatttacctgcggatatttgtgtaaattccgtagga 36406545  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcac 318  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |    
T  36406544 aacacatttcctgcagattttgccaaggattgaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaagaaatgtgaaattattcgc 36406445  T
Q  319 aggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  36406444 aggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaat 36406394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 131 - 293
Target Start/End: Original strand, 24965005 - 24965167
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||    
T  24965005 ggctcggctccaactttctttgtagcaagcccaaccattactagaatttttagcttttcctgcggatttttgtgtaaattccgcaggaaacacatttcct 24965104  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    ||| |||||||| ||||||||||||||||| |||||||||||  | |||||||||||||||||    
T  24965105 gcagattttgcctaggatttaggttccgcaggaaagatatatttgcaggaaatgtgaaattat 24965167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 131 - 353
Target Start/End: Complemental strand, 3384174 - 3383940
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||| ||||||            |||||||||||| |||  |    
T  3384174 ggctcagctccaactttctttgtagcaagtcctaccattattagaatttttagctttttctgcggatttacctgcggatttttgtgtaaattctgcaaaa 3384075  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcac 318  Q
    ||   ||||| || | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||      
T  3384074 aatgtatttcatgtagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaacgtgaaattattcgt 3383975  T
Q  319 aggaaggaagtaacgttttgcaataaattttttgc 353  Q
    ||||||||||||||||||||| ||||| |||||||    
T  3383974 aggaaggaagtaacgttttgcgataaaatttttgc 3383940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 27321993 - 27321767
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||| || |||||| |||| ||| |||||||| ||||||||||||| ||||||||||||||    
T  27321993 ggctcagctccaattttctttgtagcaagcccagccattactaaaacttttagtttttcctgcggatttttatgtaaattccgcaggaaacacatttcct 27321894  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||| || |||    | | ||     ||||   || | |||| ||||||||||||||| || |||||||||||||||| |||||||||||||    
T  27321893 gcaaattttgcctagaatt----tcctgc-----agat---tctgcaggatatgtgaaattatctgcagaaaatgtgaaattattcgcaggaaggaagta 27321806  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    || |||||| |||| |||||||||||| |||||||||||    
T  27321805 acattttgcgataatttttttgcccaggctctataaaat 27321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 34283040 - 34282913
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| ||| |||  ||||||||||| |||||||||||  || ||||||| |||||||||| ||| ||||||||||||||    
T  34283040 ggctcagctccaactttctttgtagcaagtccagtcattactagaacttttagcttttcttgcggattttagtgtaaattctgcaggaaacacatttcct 34282941  T
Q  231 gcatattttgccaaggatttaggttccg 258  Q
    ||| ||||||||||||||||| ||||||    
T  34282940 gcagattttgccaaggatttaagttccg 34282913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 105 - 257
Target Start/End: Original strand, 13243026 - 13243192
Alignment:
Q  105 gggcggagccacccccagctagcctgggc--tcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt------------tc 190  Q
    |||||||||||||||||||||||||||||  ||| |||||||||| ||||||| ||||||| |||||| ||||| |||||||||||            ||    
T  13243026 gggcggagccacccccagctagcctgggcactcacctccaactttttttgtagcaagcccagccattattagaacttttagcttttcctgcagatttatc 13243125  T
Q  191 tgtggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    || ||| |||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||    
T  13243126 tgcggagttttgtgtaaattccgcaggaaacacatttcctgtagattttgccaaggatttaggttcc 13243192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 270 - 369
Target Start/End: Complemental strand, 34282864 - 34282765
Alignment:
Q  270 tatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||| | ||||||||||||||| || ||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||| |||||||||||    
T  34282864 tatccgcatgaaatgtgaaattatttgcaggaaatgtgaaattattcgcaggaaggaagtaacgttgtgcgataaattttttgtccaggctctataaaat 34282765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 123 - 250
Target Start/End: Original strand, 38214723 - 38214850
Alignment:
Q  123 ctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaaca 222  Q
    |||||| |||||||||||||| ||||||||||| ||| ||| ||| |||||||| ||||||||||| ||| |||||||| ||||||||| |||  |||||    
T  38214723 ctagcccgggctcagctccaattttctttgtagcaagtccagccaatactagaacttttagcttttcctgcggatttttatgtaaattctgcataaaaca 38214822  T
Q  223 catttcctgcatattttgccaaggattt 250  Q
    ||||||||||| |||||| | |||||||    
T  38214823 catttcctgcagattttgtctaggattt 38214850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 131 - 257
Target Start/End: Complemental strand, 21138201 - 21138075
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||| | ||||||||||||| ||||| ||||||||||||||  | | |||||| ||| ||||||  ||||||||| |||| ||||||| ||||||    
T  21138201 ggctcagcttctactttctttgtagcaagcctaaccattactagaacctcttgcttttcctgcggatttgggtgtaaatttcgcatgaaacacgtttcct 21138102  T
Q  231 gcatattttgccaaggatttaggttcc 257  Q
    ||  |||||||||||||||||||||||    
T  21138101 gcgaattttgccaaggatttaggttcc 21138075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 284 - 369
Target Start/End: Complemental strand, 35384355 - 35384270
Alignment:
Q  284 gtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||| |||||||| ||||||||||||||||  |||||||||||    
T  35384355 gtgaaattatctggaggaaatgtgaaattattcgtaggaaggaagtaccgttttgcgataaattttttgcccaagctctataaaat 35384270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 369
Target Start/End: Original strand, 13243242 - 13243341
Alignment:
Q  270 tatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||| |||||||||||||||||||  |  |||||||||||||||  || |||  |||||||||||| | ||||||||||||| ||| |||||||||||    
T  13243242 tatccgcaggaaatgtgaaattatctccacaaaatgtgaaattattggcaagaaaaaagtaacgttttacgataaattttttgctcaggctctataaaat 13243341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 38214865 - 38214936
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||| |||||| |||||||| |||||| |||| |||||||||||  |||||||||||    
T  38214865 aggaaatgtgaaattattcgcaggaatgaagtaacattttgcgataatttttttgcccaagctctataaaat 38214936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 257
Target Start/End: Complemental strand, 39431825 - 39431679
Alignment:
Q  123 ctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaatt 210  Q
    |||||| |||||||||||||||||||||||||| || |||  | |||||| ||| |||||||||||  || ||||||            |||||||||||    
T  39431825 ctagcccgggctcagctccaactttctttgtagcaaacccttcaattacttgaacttttagcttttcttgcggatttacctgcggagttttgtgtaaatt 39431726  T
Q  211 ccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    ||| | |||||||||||| |||| |||||||||| ||||||||||||    
T  39431725 ccgtaggaaacacatttcgtgcagattttgccaaagatttaggttcc 39431679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 312
Target Start/End: Complemental strand, 39431647 - 39431591
Alignment:
Q  256 ccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaatt 312  Q
    |||||||||||||||||||| | |||||||||||||||||  |||||||||||||||    
T  39431647 ccgcaagaaagatatatccgcatgaaatgtgaaattatctacaggaaatgtgaaatt 39431591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 31500983 - 31500854
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatt----------tttgtgtaaattccgcacgaaa 220  Q
    ||||||||||||||||||||||||| | || |  ||||||||| |||||||||||||||||| |||||          ||| ||||||||| ||| ||||    
T  31500983 ggctcagctccaactttctttgtagca-gctccgccattactaaaatttttagctttttctgaggatttacttgcggatttatgtaaattctgcaggaaa 31500885  T
Q  221 cacatttcctgcatattttgccaaggattta 251  Q
    |||||||||| |  |||||||||||||||||    
T  31500884 cacatttcctacggattttgccaaggattta 31500854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 24965171 - 24965222
Alignment:
Q  318 caggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||| ||| |||||| ||||||| ||||||||||||||||| |||||||||||    
T  24965171 cagaaagaaagtaaggttttgcgataaattttttgcccaggctctataaaat 24965222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 296 - 351
Target Start/End: Complemental strand, 31500791 - 31500736
Alignment:
Q  296 gtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaatttttt 351  Q
    ||||||||||| |||||||||  | |||||||||||  ||||||||||||||||||    
T  31500791 gtaggaaatgtaaaattattcgtatgaaggaagtaatattttgcaataaatttttt 31500736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 133
Target Start/End: Complemental strand, 27322031 - 27322003
Alignment:
Q  105 gggcggagccacccccagctagcctgggc 133  Q
    |||||||||||||||||||||||||||||    
T  27322031 gggcggagccacccccagctagcctgggc 27322003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 315
Target Start/End: Complemental strand, 34282884 - 34282840
Alignment:
Q  271 atccgtaggaaatgtgaaattatctgtaggaaatgtgaaattatt 315  Q
    ||||| |||||||||||||||||| | | ||||||||||||||||    
T  34282884 atccgcaggaaatgtgaaattatccgcatgaaatgtgaaattatt 34282840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 155; Significance: 4e-82; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 11497 - 11734
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||  ||||| ||| ||||| ||||||||||||||||  |||  ||||||||    
T  11497 ggctcagctccaactttctttgtagcaagccctaccattactagaatttttt-cttttcctgcggattattgtgtaaattccgcagaaaatgcatttcct 11595  T
Q  231 gcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagta 330  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||||||    
T  11596 gcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgtaggaaggaagta 11695  T
Q  331 acgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||| |||||||||||||||||  ||||||||||    
T  11696 acgttttgcgataaattttttgcccaggttctataaaat 11734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 136 - 369
Target Start/End: Original strand, 6888 - 7120
Alignment:
Q  136 agctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgcata 235  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| ||||| |||||||||||||| | ||||  ||||||||||| |    
T  6888 agctccaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcggattattgtgtaaattccgaaggaaatgcatttcctgcaga 6987  T
Q  236 ttttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgtt 335  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| | ||||||||| |||||||||  ||||||||||||||| |    
T  6988 ttttgccaaggatttaggttccgcaggaaggatatatccgtaggaaatgtgaatttatcagcaggaaatgtaaaattattcgtaggaaggaagtaacg-t 7086  T
Q  336 ttgcaataaattttttgcccagactctataaaat 369  Q
    |||| |||||||||||||||||  ||||||||||    
T  7087 ttgcgataaattttttgcccaggttctataaaat 7120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 7e-65; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 35300583 - 35300333
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||| ||| ||||||            |||||||||||||||| ||    
T  35300583 ggctcagctccaactttctttgtagcaagccctaccattactagaatgtttagcttttcctgcggatttacctgcggatttttgtgtaaattccgcagga 35300484  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcac 318  Q
    ||   |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||      
T  35300483 aatgtatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaatgtgaaattattcgt 35300384  T
Q  319 aggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    | ||||||||||||||||| | ||||||||||| ||||  |||||||||||    
T  35300383 aagaaggaagtaacgttttacgataaatttttttcccaagctctataaaat 35300333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 190 - 369
Target Start/End: Complemental strand, 23704553 - 23704374
Alignment:
Q  190 ctgtggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaa 289  Q
    |||||||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23704553 ctgtggatttttgtgtaaattccgccgaaaacacatttcctgcagattttgccaaggatttaggttccgcaggaaagatatatccgtaggaaatgtgaaa 23704454  T
Q  290 ttatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||| ||||||||| ||||||||| || ||| ||||||||||||| | |||||||||||  ||| ||||||||||||    
T  23704453 ttatctgcaggaaatgtaaaattattcgcaagaaagaagtaacgttttacgataaattttttatccaaactctataaaat 23704374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 103 - 369
Target Start/End: Complemental strand, 7873389 - 7873125
Alignment:
Q  103 cagggcggagccacccccagctagcctgggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtgga------ 196  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| |||          
T  7873389 cagggcggagccacccccagctagcctgggct--gctccaattttctttgtagcaagcccaaccattactagaacttttagctttttctgcggatttacc 7873292  T
Q  197 ------tttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaat 290  Q
          ||||| ||||||||||||| ||||||||||||||||| |||||||| ||||||    | | ||     ||||   |||  | ||||||||||||    
T  7873291 tgcgggtttttatgtaaattccgcaggaaacacatttcctgcagattttgcctaggatt----tcctgc-----agat---tccacatgaaatgtgaaat 7873204  T
Q  291 tatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||| | ||||||||||||||||||  | ||||||||||||| |||||| |||| ||||||||||||||||||||||||    
T  7873203 tatccgcaggaaatgtgaaattattagcgggaaggaagtaacattttgcgataatttttttgcccagactctataaaat 7873125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 131 - 293
Target Start/End: Complemental strand, 26723093 - 26722919
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttct------------gtggatttttgtgtaaattccgcacga 218  Q
    ||||| ||||||||||| ||||||| ||  |||||||||||||||| ||||||||||| ||            | |||||||| ||||||||||||| ||    
T  26723093 ggctcggctccaactttttttgtagcaaatccaaccattactagaaattttagcttttcctacggatttacctgcggatttttatgtaaattccgcagga 26722994  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  26722993 aacacatttcctgcagattttgtcaaggatttaggttccgcaggaaagatatatccgtaagaaatgtgaaattat 26722919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 255
Target Start/End: Complemental strand, 21932921 - 21932798
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    |||||| |||||||||||||||||| ||||||||||||||||| || ||||| ||||| ||| | || ||||||||||||||||| ||||||||||||||    
T  21932921 ggctcaactccaactttctttgtagcaagcccaaccattactaaaacttttaacttttcctgcg-atatttgtgtaaattccgcaggaaacacatttcct 21932823  T
Q  231 gcatattttgccaaggatttaggtt 255  Q
    ||| |||||| ||||||||||||||    
T  21932822 gcagattttgtcaaggatttaggtt 21932798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 3012461 - 3012532
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3012461 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataatttttttgcccagactctataaaat 3012532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 30852315 - 30852434
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||| |||||||||||||||| || |||||||||||| ||||| ||||| ||| ||| |||| ||||||||||||| ||||||||||||||    
T  30852315 ggctcagctccaattttctttgtagtaagctcagccattactagaacttttaacttttcctgcggaattttatgtaaattccgcaggaaacacatttcct 30852414  T
Q  231 gcatattttgccaaggattt 250  Q
     || |||||||| |||||||    
T  30852415 tcagattttgcctaggattt 30852434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 257
Target Start/End: Complemental strand, 815128 - 815002
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||||||||||||||||||| ||  | | |||||||||||| ||||||||||| ||  ||||||||||||||||||||||  ||| ||||||| |    
T  815128 ggctcagctccaactttctttgtagcaaatctagccattactagaacttttagcttttcctacggatttttgtgtaaattccgcagaaaatacatttctt 815029  T
Q  231 gcatattttgccaaggatttaggttcc 257  Q
    ||| ||||||||||| |||||||||||    
T  815028 gcagattttgccaagaatttaggttcc 815002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 41759763 - 41759624
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctg------------tggatttttgtgtaaattccgcacga 218  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||  ||            |||||||| |||||||||||||| ||    
T  41759763 ggctcagctccaactttctttgtagcaagcccagccattactagaacttttagcttttcttgcagatttacttgtggattttggtgtaaattccgcagga 41759664  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccg 258  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  41759663 aacacatttcctgcagattttgccaaggatttaggttccg 41759624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 21688122 - 21688211
Alignment:
Q  166 cattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggtt 255  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  21688122 cattactagaacttttagcttttcctgcggatttttgtgtaaattccgcaggaaacacatttcctgcagattttgcgaaggatttaggtt 21688211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 5991560 - 5991325
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt---------ttgtgtaaattccgcacgaaac 221  Q
    |||||| |||||| ||||||||||| ||||||| |||||||||||| |||||| |||| ||| ||||||         || ||||||||||||| |||||    
T  5991560 ggctcaactccaattttctttgtagcaagcccagccattactagaacttttagtttttcctgcggatttacctgcggtttatgtaaattccgcaggaaac 5991461  T
Q  222 acatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacagg 321  Q
    |||||||||||| |||||||| |||||||     | |||     |||   || | |||||||||||||||||| | | ||||||| ||||||||| ||||    
T  5991460 acatttcctgcagattttgcctaggatttc----ctgca-----gat---tctgcaggaaatgtgaaattatccgcaagaaatgtaaaattattcgcagg 5991373  T
Q  322 aaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||| |||||| |||| |||||||||||| |||||||||||    
T  5991372 aaggaagtaacattttgcgataatttttttgcccaggctctataaaat 5991325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 270 - 369
Target Start/End: Complemental strand, 21932746 - 21932647
Alignment:
Q  270 tatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||| ||||||| | |||||||||| ||||||| ||||||||||| |||||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  21932746 tatccgcaggaaatataaaattatctgcaggaaatatgaaattattcgcaggaaagaagtaacattttgcgataaattttttgcccagactctataaaat 21932647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 369
Target Start/End: Original strand, 4843432 - 4843530
Alignment:
Q  271 atccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||| ||  |||||||||||    
T  4843432 atccgcaggaaatgtgaaattatccgcaggaaatgtgaaattattcgcaggaaagaagtaacgttttgcgataaattttttgctcaagctctataaaat 4843530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 257
Target Start/End: Complemental strand, 42439710 - 42439591
Alignment:
Q  138 ctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgcatatt 237  Q
    |||||||||||||||||| | || || |||||||||||| |||||| |||  |||  || ||||||||||||| |||| ||||||||||| ||||| |||    
T  42439710 ctccaactttctttgtagcatgctcagccattactagaacttttagttttacctgcagagttttgtgtaaatttcgcaggaaacacattttctgcagatt 42439611  T
Q  238 ttgccaaggatttaggttcc 257  Q
    ||||||||||||||||||||    
T  42439610 ttgccaaggatttaggttcc 42439591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 131 - 369
Target Start/End: Complemental strand, 22206829 - 22206591
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||||||||||| ||||||||||| |||||||  |||||||| |||||||||||||| ||| ||||||            || ||||||||||||| ||    
T  22206829 ggctcagctccaattttctttgtagcaagcccaggcattactataatttttagcttttcctgcggatttacctacgagtgtttatgtaaattccgcagga 22206730  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcac 318  Q
    ||||||||||||||| ||||| |  |||||||     | |||     |||   |||| ||||||||||| |||||| | ||||||||||||||||||| |    
T  22206729 aacacatttcctgcagattttacttaggatttc----ctgca-----gat---tccgcaggaaatgtgagattatccgcaggaaatgtgaaattattcgc 22206642  T
Q  319 aggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||| |||||| |||| ||| |||||||| |||||||||||    
T  22206641 aggaaggaagtaacattttgcgataattttcttgcccaggctctataaaat 22206591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 131 - 369
Target Start/End: Original strand, 22227910 - 22228148
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacga 218  Q
    ||||||||||||| ||||||||||| |||||||  |||||||| |||||||||||||| ||| ||||||            || ||||||||||||| ||    
T  22227910 ggctcagctccaattttctttgtagcaagcccaggcattactataatttttagcttttcctgcggatttacctacgagtgtttatgtaaattccgcagga 22228009  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcac 318  Q
    ||||||||||||||| ||||| |  |||||||     | |||     |||   |||| ||||||||||| |||||| | ||||||||||||||||||| |    
T  22228010 aacacatttcctgcagattttacttaggatttc----ctgca-----gat---tccgcaggaaatgtgagattatccgcaggaaatgtgaaattattcgc 22228097  T
Q  319 aggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||| |||||| |||| ||| |||||||| |||||||||||    
T  22228098 aggaaggaagtaacattttgcgataattttcttgcccaggctctataaaat 22228148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 369
Target Start/End: Original strand, 21688244 - 21688359
Alignment:
Q  255 tccgcaagaaagatatatccgtaggaaa-tgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgc 353  Q
    |||||| ||||||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||| |  | |||||| |||||  |||||||||||||    
T  21688244 tccgcaggaaagatatatccgtattaaaatgtgaaattatctgcaggaaatgtgaaattattcacagaatagcagtaacattttgtgataaattttttgc 21688343  T
Q  354 ccagactctataaaat 369  Q
    | ||| ||||||||||    
T  21688344 ctagattctataaaat 21688359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 369
Target Start/End: Complemental strand, 28694007 - 28693908
Alignment:
Q  270 tatccgtaggaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||| ||||  |||||||||||| | ||||||||||||||||||| ||| |||||||||| ||||||| |||| |||||||||||| |||||||||||    
T  28694007 tatccgcaggatttgtgaaattatccggaggaaatgtgaaattattcgcagaaaggaagtaaagttttgcgataatttttttgcccaggctctataaaat 28693908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 179 - 369
Target Start/End: Complemental strand, 38991255 - 38991082
Alignment:
Q  179 tttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttccgcaagaaagatatatccgtag 278  Q
    |||||||||| ||| |||||||||| |||||||||   ||||||||||||||||| |||||||||||||||||||                 ||||| ||    
T  38991255 tttagcttttcctgcggatttttgtataaattccgttggaaacacatttcctgcagattttgccaaggatttagg-----------------atccgcag 38991173  T
Q  279 gaaatgtgaaattatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
     ||||||||||||||  ||||||||| ||||||||||| ||||||| |  ||||||||||| |||| ||||||| || |||||||||||||    
T  38991172 aaaatgtgaaattattcgtaggaaatatgaaattattcgcaggaagaagataacgttttgcgataacttttttgtccggactctataaaat 38991082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 26722933 - 26722864
Alignment:
Q  300 gaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  26722933 gaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaagctctataaaat 26722864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 41759596 - 41759532
Alignment:
Q  305 gtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  41759596 gtgaaattattcgcaggaaggaagtaacgttgtgcgataaattttttgcccagactctataaaat 41759532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 257
Target Start/End: Original strand, 3012280 - 3012408
Alignment:
Q  141 caactttctttgtagtaagcccaaccattactagaatttttagctttttctgtg------------gatttttgtgtaaattccgcacgaaacacatttc 228  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||| ||| |            |||||||||||| |||||||| |||||||| |||    
T  3012280 caactttctttgtagcaagcccaaccattactagaacttttagcttttcctgcggatttacctgccgatttttgtgtacattccgcaggaaacacacttc 3012379  T
Q  229 ctgcatattttgccaaggatttaggttcc 257  Q
    ||||| |||||||||||||| ||||||||    
T  3012380 ctgcagattttgccaaggatataggttcc 3012408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 38129073 - 38129010
Alignment:
Q  194 ggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||    
T  38129073 ggatttttgtgtaaattctgaaggaaacacatttcctgcatattttgccaaggatttaggttcc 38129010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 19377523 - 19377618
Alignment:
Q  271 atccgtaggaaatgtgaaattatctgtaggaaa-tgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctata 365  Q
    ||||| |||||||||||||||||| | |||||| ||||||||||||| |||||| ||  |||| |||||| |||| ||||||||||||||||||||    
T  19377523 atccgcaggaaatgtgaaattatccgcaggaaaatgtgaaattattcgcaggaaagacataacattttgcgataatttttttgcccagactctata 19377618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 28694120 - 28694057
Alignment:
Q  194 ggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||||    
T  28694120 ggatttttgtgtaaattctgcaggaaacacatttcctgcagattttgcccaggatttaggttcc 28694057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 369
Target Start/End: Complemental strand, 42439545 - 42439467
Alignment:
Q  291 tatctgtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||| |||| ||||||||||||||||  || || ||||||||||||||| ||||||||||||||||||| |||||||||    
T  42439545 tatccgtagaaaatgtgaaattattcgtagaaaagaagtaacgttttgcgataaattttttgcccagaccctataaaat 42439467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 814946 - 814882
Alignment:
Q  301 aaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctata 365  Q
    |||||||||||||||  |||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  814946 aaatgtgaaattattagcaggaatgaagtaacgttttgcgataatttttttgcccagactctata 814882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 4843339 - 4843402
Alignment:
Q  194 ggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    |||| |||||||| |||||||| |||||||||||| |||| |||||||||||||||||||||||    
T  4843339 ggatatttgtgtacattccgcatgaaacacatttcatgcagattttgccaaggatttaggttcc 4843402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 25688187 - 25688116
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||||||| ||||||||||| |||| | |||| |||||| ||||| |||||||||||    
T  25688187 aggaaatgtgaaattattcacagaaaggaagtaacattttacgataatttttttacccaggctctataaaat 25688116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 30852449 - 30852520
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    ||||||||||||||||||| ||||||||||| ||| |||||| |||| |||||| |||||| |||| |||||    
T  30852449 aggaaatgtgaaattattcgcaggaaggaagcaacattttgcgataatttttttccccagattctaaaaaat 30852520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 19377430 - 19377490
Alignment:
Q  194 ggatttttgtgtaaattccgcacgaaacacatttcctgcatattttgccaaggatttaggt 254  Q
    |||| |||||| |||||||| | |||| |||||||||||| ||||||||||||||||||||    
T  19377430 ggatgtttgtggaaattccgaaggaaatacatttcctgcagattttgccaaggatttaggt 19377490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 38128957 - 38128886
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaat 369  Q
    |||||||||||||||||   |||||||||| ||||||||||| ||||| |||||||| ||| | ||||||||    
T  38128957 aggaaatgtgaaattatctgcaggaaggaaataacgttttgcgataaaatttttgcctagattttataaaat 38128886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 3012432 - 3012477
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattat 293  Q
    |||||| |||||| |||||||||||||| |||||||||||||||||    
T  3012432 tttaggatccgcaggaaagatatatccgcaggaaatgtgaaattat 3012477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 250
Target Start/End: Complemental strand, 25688331 - 25688202
Alignment:
Q  133 ctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggattt------------ttgtgtaaattccgcacgaaa 220  Q
    ||||||||||| ||||||||||| |||| || ||||||||| || ||||||||||| |||  |||||            || ||||||||||||| ||||    
T  25688331 ctcagctccaattttctttgtagcaagctcagccattactaaaacttttagcttttcctgcagatttacctgcaaatgtttatgtaaattccgcaggaaa 25688232  T
Q  221 cacatttcctgcatattttgccaaggattt 250  Q
    || |||||||||| |||||||| |||||||    
T  25688231 catatttcctgcagattttgcctaggattt 25688202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 38128986 - 38128932
Alignment:
Q  248 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgtaggaa 302  Q
    |||||| |||||| |||||||||||  | |||||||||||||||||||| |||||    
T  38128986 tttaggatccgcaggaaagatatatgtgcaggaaatgtgaaattatctgcaggaa 38128932  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 134
Target Start/End: Complemental strand, 26723131 - 26723102
Alignment:
Q  105 gggcggagccacccccagctagcctgggct 134  Q
    ||||||||||||||||||||||||||||||    
T  26723131 gggcggagccacccccagctagcctgggct 26723102  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 105 - 133
Target Start/End: Complemental strand, 41759801 - 41759773
Alignment:
Q  105 gggcggagccacccccagctagcctgggc 133  Q
    |||||||||||||||||||||||||||||    
T  41759801 gggcggagccacccccagctagcctgggc 41759773  T

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Target: scaffold0638 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 374
Target Start/End: Original strand, 4215 - 4293
Alignment:
Q  296 gtaggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaattttttgcccagactctataaaatatatg 374  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||| ||||||||||| ||||    
T  4215 gtaggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttatg 4293  T

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Target: scaffold0638; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 250
Target Start/End: Original strand, 4071 - 4202
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttt------------tctgtggatttttgtgtaaattccgcacga 218  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||| |||||||||||             ||| |||| ||| ||||||||||| | ||    
T  4071 ggctcagctccaattttctttgtagcaagcccagccattactagaacttttagcttttcctgcgaatttacctgcggatgtttatgtaaattccgtagga 4170  T
Q  219 aacacatttcctgcatattttgccaaggattt 250  Q
    ||||||||||||||| |||||||| |||||||    
T  4171 aacacatttcctgcagattttgcccaggattt 4202  T

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Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 109280 - 109208
Alignment:
Q  298 aggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaat-tttttgcccagactctataaaat 369  Q
    |||||| |||||||||||| |||||||||||||| |||||||||||||| |||||| |||| |||||| ||||    
T  109280 aggaaacgtgaaattattcgcaggaaggaagtaatgttttgcaataaatatttttgtccaggctctatgaaat 109208  T

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Target: scaffold0021; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 257
Target Start/End: Complemental strand, 109454 - 109316
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtgg------------atttttgtgtaaattccgcacga 218  Q
    ||||||||||||||||||||||||| || ||||   |||||||||| ||||| ||||| ||||||            ||||||||||||||||||||  |    
T  109454 ggctcagctccaactttctttgtagcaaccccagttattactagaacttttaacttttcctgtggatttacctgcgaatttttgtgtaaattccgcagaa 109355  T
Q  219 aacacatttcctgcatattttgccaaggatttaggttcc 257  Q
    ||||||| | ||||| ||||||| ||| |||||||||||    
T  109354 aacacatgttctgcagattttgctaagaatttaggttcc 109316  T

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Target: scaffold0021; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 112179 - 112121
Alignment:
Q  300 gaaatgtgaaattattcacaggaaggaagtaacgttttgcaataaat-tttttgcccag 357  Q
    |||| |||||||||||  |||||||||||||| |||||||||||||| |||||||||||    
T  112179 gaaacgtgaaattatttgcaggaaggaagtaatgttttgcaataaatatttttgcccag 112121  T

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Target: scaffold0108 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 21141 - 21024
Alignment:
Q  131 ggctcagctccaactttctttgtagtaagcccaaccattactagaatttttagctttttctgtggatttttgtgtaaattccgcacgaaacacatttcct 230  Q
    ||||||||| |||||||||||||   ||||||| ||||||||  || ||||  ||||| ||| ||||||| ||||| |||| ||| ||||||| ||| ||    
T  21141 ggctcagcttcaactttctttgttacaagcccagccattact--aacttttcacttttcctgcggattttggtgtatattctgcatgaaacacgttt-ct 21045  T
Q  231 gcatattttgccaaggattta 251  Q
    ||  ||||||||||| |||||    
T  21044 gcggattttgccaagtattta 21024  T

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