View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4405_high_30 (Length: 286)

Name: NF4405_high_30
Description: NF4405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4405_high_30
NF4405_high_30
[»] chr7 (1 HSPs)
chr7 (1-286)||(42158603-42158888)


Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 42158603 - 42158888
Alignment:
Q  1 tgtctctaagtttatatgttatttcaactttttcaagcaatgattatcatgattcatgaatgatgttgctatgataatagattatcaacgtggattctct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42158603 tgtctctaagtttatatgttatttcaactttttcaagcaatgattatcatgattcatgaatgatgttgctatgataatagattatcaacgtggattctct 42158702  T
Q  101 cttttggtttgtccatccaaacagtaattagccgttggacattgagcaacaaccaaccatggtttgacaaaccacctgtcgcagtaagtcagaccactaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  42158703 cttttggtttgtccatccaaacagtaattagccgttggacattgaccaacaaccaaccatggtttgacaaaccacctatcgtagtaagtcagaccactaa 42158802  T
Q  201 tttctaagaaatctatgtggtttgacgaaccaaagtatatatggtccgtccaaccactagttggttgttcgatataaaatccaaat 286  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  42158803 tttctaagaaatctatgtggtttgacgaaccacagtatatatggtccgttcaaccactagttggttgtttgatataaaatccaaat 42158888  T

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