View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4406-Insertion-3 (Length: 849)

Name: NF4406-Insertion-3
Description: NF4406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4406-Insertion-3
NF4406-Insertion-3
[»] chr3 (32 HSPs)
chr3 (7-831)||(42453403-42454229)
chr3 (723-795)||(26279577-26279649)
chr3 (723-799)||(3953895-3953971)
chr3 (724-799)||(32319155-32319230)
chr3 (731-799)||(8073345-8073413)
chr3 (723-783)||(18372530-18372590)
chr3 (723-799)||(21582802-21582878)
chr3 (723-799)||(34290635-34290711)
chr3 (723-799)||(36716024-36716100)
chr3 (723-799)||(54619202-54619278)
chr3 (732-799)||(47467715-47467782)
chr3 (723-781)||(8420375-8420433)
chr3 (724-781)||(789985-790042)
chr3 (724-781)||(25855471-25855527)
chr3 (724-781)||(49393138-49393195)
chr3 (723-799)||(53506883-53506959)
chr3 (723-799)||(54407157-54407233)
chr3 (723-790)||(50258622-50258689)
chr3 (723-790)||(54574826-54574893)
chr3 (723-789)||(53149313-53149379)
chr3 (723-788)||(23641317-23641382)
chr3 (723-788)||(38681092-38681157)
chr3 (723-788)||(43207237-43207302)
chr3 (723-796)||(52374690-52374763)
chr3 (723-799)||(9878686-9878762)
chr3 (731-799)||(28689368-28689436)
chr3 (723-799)||(37168398-37168474)
chr3 (723-783)||(42098848-42098908)
chr3 (731-799)||(44708508-44708576)
chr3 (730-783)||(27078575-27078628)
chr3 (730-783)||(27084372-27084425)
chr3 (730-790)||(36606004-36606065)
[»] chr6 (17 HSPs)
chr6 (727-831)||(2477587-2477698)
chr6 (724-799)||(30121793-30121868)
chr6 (723-797)||(34397890-34397964)
chr6 (724-788)||(1155849-1155913)
chr6 (730-799)||(28075814-28075883)
chr6 (723-799)||(13727398-13727474)
chr6 (723-799)||(19737691-19737767)
chr6 (723-799)||(20711719-20711795)
chr6 (723-799)||(21479525-21479601)
chr6 (723-790)||(21280585-21280652)
chr6 (727-788)||(6159480-6159541)
chr6 (730-799)||(17353985-17354054)
chr6 (731-831)||(20611782-20611889)
chr6 (723-799)||(27788687-27788763)
chr6 (731-799)||(33774148-33774216)
chr6 (723-789)||(27314177-27314244)
chr6 (732-781)||(24711007-24711056)
[»] chr4 (47 HSPs)
chr4 (727-831)||(27112024-27112135)
chr4 (726-799)||(36178705-36178778)
chr4 (727-790)||(36118460-36118523)
chr4 (723-829)||(52468282-52468395)
chr4 (728-797)||(2135324-2135393)
chr4 (723-831)||(39329390-39329505)
chr4 (723-799)||(32128617-32128693)
chr4 (723-799)||(54780810-54780886)
chr4 (723-790)||(10978942-10979009)
chr4 (723-790)||(47129029-47129096)
chr4 (723-790)||(51691913-51691980)
chr4 (728-786)||(45656221-45656279)
chr4 (723-831)||(10041998-10042113)
chr4 (730-799)||(34027612-34027681)
chr4 (739-831)||(40217226-40217325)
chr4 (723-799)||(2790739-2790815)
chr4 (723-799)||(39655252-39655328)
chr4 (723-799)||(43455529-43455605)
chr4 (732-799)||(1105565-1105632)
chr4 (724-799)||(35779325-35779399)
chr4 (724-799)||(38209590-38209665)
chr4 (723-790)||(48209282-48209349)
chr4 (745-799)||(4167911-4167965)
chr4 (730-799)||(10428202-10428271)
chr4 (723-831)||(24396928-24397043)
chr4 (723-799)||(17679433-17679509)
chr4 (723-799)||(34768572-34768648)
chr4 (731-799)||(37777229-37777297)
chr4 (724-767)||(24614018-24614061)
chr4 (723-790)||(36362869-36362936)
chr4 (732-829)||(37744916-37745021)
chr4 (723-788)||(9578662-9578728)
chr4 (733-783)||(13460256-13460306)
chr4 (723-765)||(30507120-30507162)
chr4 (732-789)||(37514702-37514759)
chr4 (723-799)||(51964741-51964820)
chr4 (723-799)||(35465140-35465215)
chr4 (723-795)||(54083240-54083312)
chr4 (723-782)||(16922327-16922386)
chr4 (723-790)||(32915427-32915494)
chr4 (723-770)||(55255319-55255366)
chr4 (726-780)||(15735142-15735196)
chr4 (730-778)||(23508515-23508564)
chr4 (723-799)||(16882393-16882469)
chr4 (739-782)||(5128856-5128899)
chr4 (723-781)||(16845072-16845131)
chr4 (723-770)||(19498564-19498611)
[»] chr2 (30 HSPs)
chr2 (725-831)||(38400786-38400899)
chr2 (649-790)||(13800469-13800610)
chr2 (723-799)||(24035544-24035620)
chr2 (723-831)||(21665699-21665814)
chr2 (723-829)||(16096998-16097111)
chr2 (724-799)||(42029172-42029247)
chr2 (724-790)||(16227368-16227434)
chr2 (723-799)||(3155244-3155320)
chr2 (723-799)||(12337447-12337523)
chr2 (723-799)||(29939861-29939937)
chr2 (723-799)||(40636165-40636241)
chr2 (723-828)||(7742132-7742245)
chr2 (723-831)||(12134039-12134154)
chr2 (724-772)||(10252470-10252518)
chr2 (723-799)||(28425709-28425785)
chr2 (723-790)||(4505930-4505997)
chr2 (728-799)||(24410464-24410535)
chr2 (723-799)||(9046056-9046133)
chr2 (723-799)||(26716155-26716232)
chr2 (723-799)||(6965034-6965110)
chr2 (723-790)||(34694011-34694078)
chr2 (723-790)||(34716423-34716490)
chr2 (723-764)||(22727456-22727497)
chr2 (723-783)||(7162827-7162887)
chr2 (724-780)||(11952588-11952643)
chr2 (732-799)||(3953033-3953100)
chr2 (731-790)||(8907086-8907145)
chr2 (724-799)||(10762565-10762640)
chr2 (745-799)||(5952736-5952790)
chr2 (730-797)||(27506746-27506813)
[»] chr7 (33 HSPs)
chr7 (723-831)||(7398440-7398555)
chr7 (723-831)||(27237421-27237536)
chr7 (723-789)||(2611260-2611326)
chr7 (723-799)||(19692122-19692198)
chr7 (723-795)||(23744828-23744900)
chr7 (723-799)||(29077248-29077324)
chr7 (724-779)||(6765680-6765735)
chr7 (724-799)||(21763586-21763661)
chr7 (724-799)||(33162338-33162413)
chr7 (726-831)||(23859062-23859174)
chr7 (725-799)||(36902924-36902998)
chr7 (724-831)||(9021799-9021912)
chr7 (723-795)||(26254025-26254097)
chr7 (723-799)||(48983842-48983918)
chr7 (723-790)||(8171537-8171604)
chr7 (723-790)||(18776764-18776831)
chr7 (723-831)||(12981315-12981430)
chr7 (727-831)||(18201126-18201237)
chr7 (723-799)||(20091279-20091355)
chr7 (723-766)||(12419493-12419536)
chr7 (724-780)||(9014177-9014233)
chr7 (739-795)||(20153233-20153289)
chr7 (747-799)||(38971281-38971333)
chr7 (728-799)||(24525688-24525759)
chr7 (723-789)||(10955522-10955588)
chr7 (723-789)||(28749747-28749813)
chr7 (746-799)||(23551092-23551145)
chr7 (674-782)||(23020434-23020541)
chr7 (723-799)||(38414874-38414950)
chr7 (730-781)||(10329415-10329466)
chr7 (732-799)||(12596294-12596361)
chr7 (730-799)||(47984974-47985044)
chr7 (739-780)||(9014783-9014824)
[»] scaffold1590 (1 HSPs)
scaffold1590 (723-831)||(257-372)
[»] chr8 (33 HSPs)
chr8 (723-831)||(41677172-41677288)
chr8 (723-831)||(15167414-15167529)
chr8 (724-831)||(39332405-39332519)
chr8 (649-829)||(7944447-7944634)
chr8 (673-781)||(5973057-5973164)
chr8 (728-795)||(23941095-23941162)
chr8 (724-799)||(30674403-30674478)
chr8 (739-826)||(8102906-8103000)
chr8 (723-782)||(8646250-8646309)
chr8 (723-829)||(11290175-11290288)
chr8 (723-799)||(41879209-41879285)
chr8 (723-799)||(45475845-45475921)
chr8 (724-799)||(5860744-5860819)
chr8 (724-779)||(14509983-14510038)
chr8 (647-828)||(15078750-15078938)
chr8 (746-831)||(5942685-5942777)
chr8 (723-797)||(23606628-23606702)
chr8 (723-797)||(37430157-37430231)
chr8 (724-769)||(9108551-9108596)
chr8 (723-799)||(10917419-10917495)
chr8 (723-799)||(30883357-30883433)
chr8 (723-790)||(2952220-2952287)
chr8 (724-799)||(23798261-23798336)
chr8 (724-770)||(34868177-34868223)
chr8 (739-792)||(3048532-3048585)
chr8 (732-831)||(5721548-5721654)
chr8 (723-799)||(13534686-13534761)
chr8 (723-799)||(13624226-13624301)
chr8 (724-780)||(34048705-34048761)
chr8 (723-799)||(34789861-34789937)
chr8 (725-831)||(25561496-25561607)
chr8 (723-772)||(38009151-38009200)
chr8 (730-799)||(42600810-42600879)
[»] scaffold0012 (1 HSPs)
scaffold0012 (673-825)||(206439-206597)
[»] chr5 (43 HSPs)
chr5 (723-831)||(34425892-34426007)
chr5 (724-831)||(14318382-14318496)
chr5 (724-799)||(7338027-7338102)
chr5 (723-831)||(1366522-1366637)
chr5 (723-831)||(36868872-36868987)
chr5 (723-799)||(27079039-27079115)
chr5 (730-799)||(16198797-16198866)
chr5 (724-831)||(2412077-2412191)
chr5 (723-799)||(38869359-38869435)
chr5 (724-799)||(26718946-26719021)
chr5 (724-799)||(26988690-26988765)
chr5 (723-829)||(33037771-33037884)
chr5 (723-772)||(606209-606258)
chr5 (723-795)||(2024638-2024710)
chr5 (725-781)||(22648734-22648790)
chr5 (723-799)||(28822338-28822414)
chr5 (723-799)||(34756362-34756438)
chr5 (723-781)||(10407507-10407565)
chr5 (723-789)||(30854367-30854433)
chr5 (724-790)||(41911614-41911680)
chr5 (731-831)||(2530901-2531008)
chr5 (730-799)||(9364319-9364388)
chr5 (730-799)||(40389539-40389608)
chr5 (723-799)||(16592070-16592146)
chr5 (731-799)||(24395767-24395835)
chr5 (723-783)||(31194608-31194668)
chr5 (724-799)||(10543701-10543776)
chr5 (732-799)||(15480094-15480161)
chr5 (733-799)||(19523227-19523293)
chr5 (723-831)||(11242314-11242429)
chr5 (723-831)||(40794323-40794438)
chr5 (723-799)||(2274918-2274994)
chr5 (731-799)||(16799331-16799399)
chr5 (723-795)||(17344988-17345060)
chr5 (723-799)||(22986554-22986630)
chr5 (723-795)||(23284058-23284130)
chr5 (723-767)||(27530543-27530587)
chr5 (723-783)||(31881430-31881490)
chr5 (723-799)||(36187875-36187951)
chr5 (724-788)||(15639682-15639749)
chr5 (649-763)||(35080694-35080806)
chr5 (728-766)||(22875003-22875041)
chr5 (739-797)||(27924112-27924170)
[»] scaffold0097 (1 HSPs)
scaffold0097 (728-831)||(38914-39024)
[»] scaffold0039 (1 HSPs)
scaffold0039 (723-799)||(106566-106642)
[»] scaffold0182 (1 HSPs)
scaffold0182 (724-799)||(23993-24068)
[»] chr1 (35 HSPs)
chr1 (723-829)||(45758496-45758609)
chr1 (723-831)||(39134720-39134836)
chr1 (724-831)||(38547035-38547149)
chr1 (723-799)||(50881469-50881545)
chr1 (723-790)||(44655789-44655856)
chr1 (724-831)||(26803948-26804059)
chr1 (730-799)||(27559676-27559745)
chr1 (723-799)||(5027588-5027664)
chr1 (723-799)||(5316719-5316795)
chr1 (723-799)||(21740935-21741011)
chr1 (723-799)||(23185466-23185542)
chr1 (732-799)||(16140094-16140161)
chr1 (723-781)||(38853579-38853637)
chr1 (730-799)||(17168995-17169064)
chr1 (732-799)||(6771830-6771897)
chr1 (728-799)||(9173026-9173097)
chr1 (728-799)||(9181008-9181079)
chr1 (723-790)||(14146348-14146415)
chr1 (647-829)||(43235690-43235881)
chr1 (725-795)||(1366878-1366948)
chr1 (724-790)||(4971617-4971683)
chr1 (739-797)||(40501804-40501862)
chr1 (723-788)||(6889661-6889726)
chr1 (723-788)||(6891507-6891572)
chr1 (724-831)||(6221678-6221791)
chr1 (723-782)||(3406474-3406533)
chr1 (723-782)||(3440287-3440346)
chr1 (723-770)||(27906727-27906774)
chr1 (723-797)||(50146337-50146411)
chr1 (730-799)||(19955756-19955825)
chr1 (723-831)||(33170759-33170874)
chr1 (723-783)||(17322621-17322681)
chr1 (723-767)||(22865459-22865503)
chr1 (723-781)||(5533369-5533428)
chr1 (723-782)||(41697135-41697194)
[»] scaffold0018 (1 HSPs)
scaffold0018 (729-797)||(173515-173583)
[»] scaffold0007 (1 HSPs)
scaffold0007 (723-831)||(230858-230973)
[»] scaffold1320 (1 HSPs)
scaffold1320 (647-828)||(1346-1534)
[»] scaffold0070 (1 HSPs)
scaffold0070 (723-790)||(1380-1447)
[»] scaffold0227 (1 HSPs)
scaffold0227 (731-769)||(16123-16161)
[»] scaffold0022 (2 HSPs)
scaffold0022 (723-770)||(40142-40191)
scaffold0022 (723-770)||(138202-138251)
[»] scaffold0003 (1 HSPs)
scaffold0003 (750-799)||(351360-351409)
[»] scaffold0001 (1 HSPs)
scaffold0001 (732-781)||(183106-183155)


Alignment Details
Target: chr3 (Bit Score: 731; Significance: 0; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 731; E-Value: 0
Query Start/End: Original strand, 7 - 831
Target Start/End: Complemental strand, 42454229 - 42453403
Alignment:
Q  7 atattttagttaagttgagagattagtttttgtagttgaacacgatgatacattagtttaccttaacagttatattttaggtcaggttcatgtagtatgc 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42454229 atattttagttaagttgaaagattagtttttgtagttgaacacgatgatacattagtttaccttaacagttatattttaggtcaggttcatgtagtatgc 42454130  T
Q  107 acgatacatggcgtatagttcggtttgaagacttgcagacacttcaatttgatcagtagaatccgcccacaccatgtgtagattttgtcaatggttacct 206  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42454129 actatacatggcgtatagttcggtttgaagacttgcagacacttcaatttgatcagtagaatccgcccacaccatgtgtagattttgtcaatggttacct 42454030  T
Q  207 ggctacttggttcacatttattagacggctacttgcattgaacttgaatagaaatgtcactaccatgtgccacttacaatttgtggggtcctttttgatt 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42454029 ggctacttggttcacatttattagacggctacttgcattgaacttgaatagaaatgtcactaccatgtgccacttagaatttgtggggtcctttttgatt 42453930  T
Q  307 gttttggtttgttatcattttcctttagcttaagcttgacttggtcttaaatatgatcaaccaataagcccttcagaatatttggttataatcttcctca 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42453929 gttttggtttgttatcattttcctttagcttaagcttgacttggtcttaaatatgatcaaccaataagcccttcagaatatttggttataatcttcctca 42453830  T
Q  407 atgtcttttcaagtagccggtgaaacaattccatcttcacttcattccaaacgtgnnnnnnngcattttgtctaaaccgaccaggtgactcagttgaact 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  42453829 atgtcttttcaagtagccggtgaaacaattccatcttcacttcattccaaacgtgtttttttgcattttgtctaaaccgaccaggtgactcagttgaact 42453730  T
Q  507 taaattacactcttatcgtttgaatttcgtgcctcatacgactataagcatataaggaagggtccaagtgtggttgagttttggccaaatctcttctctt 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42453729 taaattacactcttatcgtttgaatttcgtgcctcatacgactataagcatataaggaagggtccaagtgtggttgagttttggccaaatctcttctctt 42453630  T
Q  607 atcggatatcaaattttatagaatcgaatgtgtgtacatggtcgtttctacgaatcagaagctcgactctgtaagtgaaaagatgtttgtaatgaaataa 706  Q
    ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  42453629 atccgatatcaaattttatagaattgaatgtgtgtacatggtcgttcctacgaatgagaagctcgactctgtaagtgaaaaaatgtttgtaatgaaataa 42453530  T
Q  707 aaa--atgtannnnnnnnaaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtgatagcg 804  Q
    |||  || |         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42453529 aaaacatattttttttttaaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtgatagcg 42453430  T
Q  805 tatacatgaggaacctcaaaccaccct 831  Q
    |||||||||||||||||||||||||||    
T  42453429 tatacatgaggaacctcaaaccaccct 42453403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 26279649 - 26279577
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaag 795  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||| ||||    
T  26279649 aaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaag 26279577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 3953895 - 3953971
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  3953895 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 3953971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 32319155 - 32319230
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||  |||||||||| |||||| ||||||||    
T  32319155 aaagaataatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtga 32319230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 731 - 799
Target Start/End: Original strand, 8073345 - 8073413
Alignment:
Q  731 aatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||||| |||||| ||| ||||    
T  8073345 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtga 8073413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 783
Target Start/End: Complemental strand, 18372590 - 18372530
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcg 783  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||    
T  18372590 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcg 18372530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 21582878 - 21582802
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  21582878 aaaagaacaatgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 21582802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 34290635 - 34290711
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||| |||||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  34290635 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtga 34290711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 36716024 - 36716100
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  36716024 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 36716100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 54619202 - 54619278
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  54619202 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 54619278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 732 - 799
Target Start/End: Complemental strand, 47467782 - 47467715
Alignment:
Q  732 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| ||||| |||||||||||||||||||||||||| | ||||||||||||||||| | ||||||    
T  47467782 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtga 47467715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 723 - 781
Target Start/End: Complemental strand, 8420433 - 8420375
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatg 781  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||| | ||||||||    
T  8420433 aaaagaataatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatg 8420375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 724 - 781
Target Start/End: Complemental strand, 790042 - 789985
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatg 781  Q
    |||||||||| ||| ||||||||||||||||  |||||||||||||||||||||||||    
T  790042 aaagaacaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatg 789985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 724 - 781
Target Start/End: Complemental strand, 25855527 - 25855471
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatg 781  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  25855527 aaagaacaatgttctatttaaattttttaaaagat-aatacaaggtgtcgtatatatg 25855471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 724 - 781
Target Start/End: Complemental strand, 49393195 - 49393138
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatg 781  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||    
T  49393195 aaagaacaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatg 49393138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 53506883 - 53506959
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||| |||||||||| ||||| ||||||||||||||||||| |||||  | |||||||||| |||||| ||||||||    
T  53506883 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtga 53506959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 54407157 - 54407233
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||| |||||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||| | ||||||||    
T  54407157 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtga 54407233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 723 - 790
Target Start/End: Original strand, 50258622 - 50258689
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| | |||||| ||||| ||||||||||| |||||||||||||||| |||||||||| ||||||    
T  50258622 aaaagagcgatgttctatttatattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacc 50258689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 723 - 790
Target Start/End: Original strand, 54574826 - 54574893
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||  | |||||||||| ||||||    
T  54574826 aaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacc 54574893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 723 - 789
Target Start/End: Original strand, 53149313 - 53149379
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacac 789  Q
    |||||| | |||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||    
T  53149313 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacac 53149379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 723 - 788
Target Start/End: Original strand, 23641317 - 23641382
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgataca 788  Q
    ||||||||||  ||| ||||| |||||||||||||||||||||| ||||| |||||||||| ||||    
T  23641317 aaaagaacaacattctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 723 - 788
Target Start/End: Original strand, 38681092 - 38681157
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgataca 788  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | ||| |||||| ||||    
T  38681092 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtaca 38681157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 723 - 788
Target Start/End: Original strand, 43207237 - 43207302
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgataca 788  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| ||||    
T  43207237 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtaca 43207302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 723 - 796
Target Start/End: Complemental strand, 52374763 - 52374690
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaagg 796  Q
    ||||||||||||||| |||||||||||||   | |||||||||| ||||| |||| |||||||||| |||||||    
T  52374763 aaaagaacaatgttctatttaaatttttttttaaataaatacaatgtgtcgtatagatgcgatacatctaaagg 52374690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 9878686 - 9878762
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||| ||| ||||| ||||||||||||||||||| ||||||   |||||||||| |||||| ||||||||    
T  9878686 aaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtga 9878762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 731 - 799
Target Start/End: Original strand, 28689368 - 28689436
Alignment:
Q  731 aatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||| |||||||||||  ||||||||||||||||||| | ||||||||||||| | | ||||||||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtga 28689436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 37168474 - 37168398
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||| |||||||||| ||||| ||||||||||||||||||| |||||| | |||||||| | || ||| ||||||||    
T  37168474 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtga 37168398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 783
Target Start/End: Complemental strand, 42098908 - 42098848
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcg 783  Q
    |||||| | |||||| ||||| |||||||||||||||||||||||||| | ||||||||||    
T  42098908 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcg 42098848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 731 - 799
Target Start/End: Complemental strand, 44708576 - 44708508
Alignment:
Q  731 aatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||| ||||| ||||||||||||||||||| |||||| | ||||||| || |||||| ||||||||    
T  44708576 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtga 44708508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 730 - 783
Target Start/End: Original strand, 27078575 - 27078628
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcg 783  Q
    |||||||| ||||| |||||||||||||||||||||| ||| | ||||||||||    
T  27078575 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcg 27078628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 730 - 783
Target Start/End: Original strand, 27084372 - 27084425
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcg 783  Q
    |||||||| ||||| |||||||||||||||||||||| ||| | ||||||||||    
T  27084372 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcg 27084425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 730 - 790
Target Start/End: Complemental strand, 36606065 - 36606004
Alignment:
Q  730 caatgttcaatttaaattttttaaaa-gataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||||| ||||| ||||||||||| ||||||||||||||| | |||||||||| ||||||    
T  36606065 caatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacacc 36606004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 4e-31; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 727 - 831
Target Start/End: Original strand, 2477587 - 2477698
Alignment:
Q  727 gaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacc 819  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||       || |||||||||||||||||    
T  2477587 gaacaatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 2477686  T
Q  820 tcaaaccaccct 831  Q
    ||||||||||||    
T  2477687 tcaaaccaccct 2477698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 724 - 799
Target Start/End: Complemental strand, 30121868 - 30121793
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtga 30121793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 723 - 797
Target Start/End: Complemental strand, 34397964 - 34397890
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggt 797  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  34397964 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggt 34397890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 724 - 788
Target Start/End: Original strand, 1155849 - 1155913
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgataca 788  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  1155849 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtaca 1155913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 730 - 799
Target Start/End: Complemental strand, 28075883 - 28075814
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||| ||||| ||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||    
T  28075883 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtga 28075814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 13727398 - 13727474
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  13727398 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 13727474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 19737691 - 19737767
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| ||||||| |||||||||||||||||| | |||||||||| |||||||| ||||||    
T  19737691 aaaagagcaatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtga 19737767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 20711719 - 20711795
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  20711719 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtga 20711795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 21479601 - 21479525
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  21479601 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 21479525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 723 - 790
Target Start/End: Complemental strand, 21280652 - 21280585
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| ||||||    
T  21280652 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 21280585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 727 - 788
Target Start/End: Complemental strand, 6159541 - 6159480
Alignment:
Q  727 gaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgataca 788  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||||| ||||    
T  6159541 gaacaatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 6159480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 730 - 799
Target Start/End: Complemental strand, 17354054 - 17353985
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||| ||||| ||||||||||||||||||| |||||||| |||||||||| |||||| ||| ||||    
T  17354054 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtga 17353985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 731 - 831
Target Start/End: Complemental strand, 20611889 - 20611782
Alignment:
Q  731 aatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaa 823  Q
    ||||||| | |||||||||||||| ||||||||||||||||| ||||||| ||| ||| | ||||||||       || |||||||||||||||||||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 20611790  T
Q  824 accaccct 831  Q
    || |||||    
T  20611789 actaccct 20611782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 27788687 - 27788763
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||| ||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  27788687 aaaagagcaattttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtga 27788763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 731 - 799
Target Start/End: Complemental strand, 33774216 - 33774148
Alignment:
Q  731 aatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| ||| ||||    
T  33774216 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtga 33774148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 723 - 789
Target Start/End: Original strand, 27314177 - 27314244
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaa-gataaatacaaggtgtcatatatatgcgatacac 789  Q
    |||||| |||||||| ||||| ||||||||||| ||||||||||||||| | |||||||||| |||||    
T  27314177 aaaagagcaatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacac 27314244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 732 - 781
Target Start/End: Original strand, 24711007 - 24711056
Alignment:
Q  732 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatg 781  Q
    |||||| ||||| |||||||||||||||||||||||||| | ||||||||    
T  24711007 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 24711056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 4e-31; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 727 - 831
Target Start/End: Complemental strand, 27112135 - 27112024
Alignment:
Q  727 gaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacc 819  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||       || |||||||||||||||||    
T  27112135 gaacaatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 27112036  T
Q  820 tcaaaccaccct 831  Q
    ||||||||||||    
T  27112035 tcaaaccaccct 27112024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 726 - 799
Target Start/End: Complemental strand, 36178778 - 36178705
Alignment:
Q  726 agaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  36178778 agaacaatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtga 36178705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 727 - 790
Target Start/End: Original strand, 36118460 - 36118523
Alignment:
Q  727 gaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  36118460 gaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacc 36118523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 723 - 829
Target Start/End: Complemental strand, 52468395 - 52468282
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||  ||||| | ||||||||       || ||||| |||||||    
T  52468395 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgagg 52468296  T
Q  816 aacctcaaaccacc 829  Q
    ||||||||||||||    
T  52468295 aacctcaaaccacc 52468282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 728 - 797
Target Start/End: Original strand, 2135324 - 2135393
Alignment:
Q  728 aacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggt 797  Q
    |||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  2135324 aacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggt 2135393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 39329390 - 39329505
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtg-------atagcgtatacatgagg 815  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||| |||||||| |||| ||       ||| |||||||| ||||    
T  39329390 aaaagaacaatgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggagg 39329489  T
Q  816 aacctcaaaccaccct 831  Q
    ||| ||||||||||||    
T  39329490 aacatcaaaccaccct 39329505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 32128693 - 32128617
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||||| |||||||||| |||||| ||||||||    
T  32128693 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtga 32128617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 54780886 - 54780810
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| ||||||||    
T  54780886 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtga 54780810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 723 - 790
Target Start/End: Complemental strand, 10979009 - 10978942
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||||| ||||||    
T  10979009 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacc 10978942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 723 - 790
Target Start/End: Complemental strand, 47129096 - 47129029
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| | |||||||||| ||||||    
T  47129096 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 47129029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 723 - 790
Target Start/End: Original strand, 51691913 - 51691980
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||| | |||||||||| ||||||    
T  51691913 aaaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 51691980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 728 - 786
Target Start/End: Complemental strand, 45656279 - 45656221
Alignment:
Q  728 aacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgata 786  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  45656279 aacaatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgata 45656221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 10041998 - 10042113
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||| | ||| |||| |||||||||||| ||||       || |||||||| ||||    
T  10041998 aaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggagg 10042097  T
Q  816 aacctcaaaccaccct 831  Q
    ||||||||| ||||||    
T  10042098 aacctcaaatcaccct 10042113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 730 - 799
Target Start/End: Complemental strand, 34027681 - 34027612
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||| ||||| ||||||||||||||||||| |||||||| |||||||||| |||||| ||||||||    
T  34027681 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtga 34027612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 739 - 831
Target Start/End: Complemental strand, 40217325 - 40217226
Alignment:
Q  739 atttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaaaccaccct 831  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||| | |||| |||       |||| |||||||||| ||||||||||||||||    
T  40217325 atttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacctcaaaccaccct 40217226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 2790739 - 2790815
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||  | |||||||||| |||||| ||||||||    
T  2790739 aaaagaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtga 2790815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 39655252 - 39655328
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||  |  ||||||||| |||||| ||||||||    
T  39655252 aaaagaacaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtga 39655328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 43455529 - 43455605
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  43455529 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtga 43455605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 732 - 799
Target Start/End: Complemental strand, 1105632 - 1105565
Alignment:
Q  732 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| ||||| ||||||||||||||||||||||||| || |||||||||| |||||||| ||||||    
T  1105632 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtga 1105565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 35779325 - 35779399
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||| |||||||| ||| | |||||||||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  35779325 aaagagcaatgttctatt-atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtga 35779399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 38209590 - 38209665
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  38209590 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 38209665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 723 - 790
Target Start/End: Complemental strand, 48209349 - 48209282
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| ||||||    
T  48209349 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 48209282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 745 - 799
Target Start/End: Original strand, 4167911 - 4167965
Alignment:
Q  745 attttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||    
T  4167911 attttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtga 4167965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 730 - 799
Target Start/End: Original strand, 10428202 - 10428271
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  10428202 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 10428271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 723 - 831
Target Start/End: Complemental strand, 24397043 - 24396928
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||| ||  ||||||||||||||||||||||||| ||||||   |||||||| |||||||  ||||||||       || |||||||||||||    
T  24397043 aaaagaacaatattttatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgagg 24396944  T
Q  816 aacctcaaaccaccct 831  Q
    |||||||||| |||||    
T  24396943 aacctcaaactaccct 24396928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 17679509 - 17679433
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||| ||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  17679509 aaaagagcaatattctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 17679433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 34768572 - 34768648
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| | ||||||    
T  34768572 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtga 34768648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 731 - 799
Target Start/End: Original strand, 37777229 - 37777297
Alignment:
Q  731 aatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  37777229 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtga 37777297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Complemental strand, 24614061 - 24614018
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaag 767  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  24614061 aaagaacaatgttctatttaaattttttaaaagataaatacaag 24614018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 723 - 790
Target Start/End: Original strand, 36362869 - 36362936
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||||||||| ||  ||||||||||||||||||||||||||| ||| | ||||||||| |||||||    
T  36362869 aaaagaacaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacc 36362936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 732 - 829
Target Start/End: Original strand, 37744916 - 37745021
Alignment:
Q  732 atgttcaatttaaatttt-ttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaa 823  Q
    |||||| ||||||||||| |||||||||||||| ||||||||  |||||||||||||| | ||||||||       || ||||||| |||||||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacctcaa 37745015  T
Q  824 accacc 829  Q
    ||||||    
T  37745016 accacc 37745021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 723 - 788
Target Start/End: Original strand, 9578662 - 9578728
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggt-gtcatatatatgcgataca 788  Q
    |||||| |||||||| ||||| ||||||||||||||||||||||||| | |||||||||||| ||||    
T  9578662 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtagccatatatatgcggtaca 9578728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 733 - 783
Target Start/End: Complemental strand, 13460306 - 13460256
Alignment:
Q  733 tgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcg 783  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcg 13460256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 723 - 765
Target Start/End: Original strand, 30507120 - 30507162
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaataca 765  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  30507120 aaaagaacaatgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 732 - 789
Target Start/End: Complemental strand, 37514759 - 37514702
Alignment:
Q  732 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacac 789  Q
    |||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||    
T  37514759 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacac 37514702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 51964820 - 51964741
Alignment:
Q  723 aaaagaacaatgttcaatttaaatttttt---aaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||   ||||||||||||||||||| | ||||||||||||||||| | ||||||    
T  51964820 aaaagagcaatgttctatttatattttttttaaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtga 51964741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 35465215 - 35465140
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||||||||||  ||||| |||||||| |||||||||| |||||| | |||||||||| |||||||||| ||||    
T  35465215 aaaagaacaatgttatatttatattttttacaagataaataaaaggtg-cgtatatatgcggtacacctaaaagtga 35465140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 54083240 - 54083312
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaag 795  Q
    |||| ||||||| || ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||    
T  54083240 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaag 54083312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 723 - 782
Target Start/End: Original strand, 16922327 - 16922386
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgc 782  Q
    |||||| |||||||| ||||| ||||||||||||||||||| || ||||| |||||||||    
T  16922327 aaaagagcaatgttctatttatattttttaaaagataaatataaagtgtcgtatatatgc 16922386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 723 - 790
Target Start/End: Complemental strand, 32915494 - 32915427
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| | |||||| ||||| |||||||||||||||||||||||||| | |||||||| | ||||||    
T  32915494 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacc 32915427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 723 - 770
Target Start/End: Complemental strand, 55255366 - 55255319
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtg 770  Q
    |||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  55255366 aaaagagcaatgttccatttatattttttaaaagataaatacaaggtg 55255319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 726 - 780
Target Start/End: Complemental strand, 15735196 - 15735142
Alignment:
Q  726 agaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatat 780  Q
    |||||| ||||| |||||||||||||||||||||||||||||  ||| |||||||    
T  15735196 agaacagtgttctatttaaattttttaaaagataaatacaagacgtcgtatatat 15735142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 730 - 778
Target Start/End: Original strand, 23508515 - 23508564
Alignment:
Q  730 caatgttcaattta-aattttttaaaagataaatacaaggtgtcatatat 778  Q
    |||||||| ||||| ||||||||||||||||||||||||||||| |||||    
T  23508515 caatgttctatttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 16882393 - 16882469
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||| |||||||||| ||||| | ||||||||||||||||| |||||| | | ||||| || |||||| ||||||||    
T  16882393 aaaaaaacaatgttctatttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtga 16882469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 739 - 782
Target Start/End: Original strand, 5128856 - 5128899
Alignment:
Q  739 atttaaattttttaaaagataaatacaaggtgtcatatatatgc 782  Q
    ||||| |||||||||||||||||||||||||| | |||||||||    
T  5128856 atttatattttttaaaagataaatacaaggtgccgtatatatgc 5128899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 723 - 781
Target Start/End: Complemental strand, 16845131 - 16845072
Alignment:
Q  723 aaaagaacaatgttcaatttaaatttttt-aaaagataaatacaaggtgtcatatatatg 781  Q
    |||||| |||||||| ||||| ||||||| |||||||||||| |||||||| ||||||||    
T  16845131 aaaagagcaatgttctatttatatttttttaaaagataaatataaggtgtcgtatatatg 16845072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 723 - 770
Target Start/End: Complemental strand, 19498611 - 19498564
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtg 770  Q
    |||||| |||||||| ||||| ||||||||||||||||||| ||||||    
T  19498611 aaaagagcaatgttctatttatattttttaaaagataaatataaggtg 19498564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 6e-30; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 725 - 831
Target Start/End: Complemental strand, 38400899 - 38400786
Alignment:
Q  725 aagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaa 817  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||       || |||||||||||||||    
T  38400899 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaa 38400800  T
Q  818 cctcaaaccaccct 831  Q
    ||||||||||||||    
T  38400799 cctcaaaccaccct 38400786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 649 - 790
Target Start/End: Original strand, 13800469 - 13800610
Alignment:
Q  649 cgtttctacgaatcagaag-ctcgactctgtaagtgaaaagatgtttgtaatgaaataaaaaatgtannnnnnnnaaaagaacaatgttcaatttaaatt 747  Q
    |||||||||||||  |||| |||||||||||||||||||||| ||| ||||| ||||||||| ||||        ||||||||||||||| |||||||||    
T  13800469 cgtttctacgaattcgaagactcgactctgtaagtgaaaagaggttcgtaataaaataaaaa-tgtatttttttaaaaagaacaatgttctatttaaatt 13800567  T
Q  748 ttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||||||||||||| |||||| | |||||||||||||||||    
T  13800568 ttttaaaagataaatataaggtgccgtatatatgcgatacacc 13800610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 24035544 - 24035620
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  24035544 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtga 24035620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 21665699 - 21665814
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| |||||| | ||| ||||       || |||||||||||||    
T  21665699 aaaagaacaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgagg 21665798  T
Q  816 aacctcaaaccaccct 831  Q
    |||| |||||||||||    
T  21665799 aaccacaaaccaccct 21665814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 723 - 829
Target Start/End: Complemental strand, 16097111 - 16096998
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||   |||||| ||||||||       || | |||||||||||    
T  16097111 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgagg 16097012  T
Q  816 aacctcaaaccacc 829  Q
    ||||||||||||||    
T  16097011 aacctcaaaccacc 16096998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 724 - 799
Target Start/End: Complemental strand, 42029247 - 42029172
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||   |||||||||||||||    
T  42029247 aaagaacaatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtga 42029172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 724 - 790
Target Start/End: Original strand, 16227368 - 16227434
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  16227368 aaagaacaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacc 16227434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 3155320 - 3155244
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||||| ||||||    
T  3155320 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtga 3155244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 12337447 - 12337523
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| | |||||| | ||||||    
T  12337447 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtga 12337523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 29939861 - 29939937
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||    
T  29939861 aaaagagcaatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtga 29939937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 40636241 - 40636165
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||||| |||||| | ||||||    
T  40636241 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtga 40636165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 723 - 828
Target Start/End: Original strand, 7742132 - 7742245
Alignment:
Q  723 aaaagaacaatgttcaatttaaatttt-ttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgag 814  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||| |||| | ||||||||       || ||||| ||||||    
T  7742132 aaaagaacaatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgag 7742231  T
Q  815 gaacctcaaaccac 828  Q
    ||||||||||||||    
T  7742232 gaacctcaaaccac 7742245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 12134039 - 12134154
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| |||||||   |||||||||||||||||||||  | ||||||||||||||||| ||| ||||       || ||||||||| |||    
T  12134039 aaaagaacaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattagg 12134138  T
Q  816 aacctcaaaccaccct 831  Q
    ||||||||||||||||    
T  12134139 aacctcaaaccaccct 12134154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 724 - 772
Target Start/End: Complemental strand, 10252518 - 10252470
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtc 772  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10252518 aaagaaaaatgttcaatttaaattttttaaaagataaatacaaggtgtc 10252470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 28425709 - 28425785
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||| |||||||||  |||||| ||| ||||    
T  28425709 aaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtga 28425785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 723 - 790
Target Start/End: Complemental strand, 4505997 - 4505930
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| ||||||    
T  4505997 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 4505930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 728 - 799
Target Start/End: Complemental strand, 24410535 - 24410464
Alignment:
Q  728 aacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  24410535 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtga 24410464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 9046133 - 9046056
Alignment:
Q  723 aaaagaacaatgttcaatttaaatttttt-aaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||||||||||| ||||| ||||||| |||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  9046133 aaaagaacaatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtga 9046056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 26716232 - 26716155
Alignment:
Q  723 aaaagaacaatgttcaatttaaatttttt-aaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| ||||||| |||||||||||| |||||| |||||||||||| |||||| ||||||||    
T  26716232 aaaagagcaatgttctatttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtga 26716155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 6965110 - 6965034
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||| ||| | |||||||||| |||||| | ||||||    
T  6965110 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtga 6965034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 723 - 790
Target Start/End: Complemental strand, 34694078 - 34694011
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||| | ||||||    
T  34694078 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacc 34694011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 723 - 790
Target Start/End: Complemental strand, 34716490 - 34716423
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||| | ||||||    
T  34716490 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacc 34716423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 723 - 764
Target Start/End: Original strand, 22727456 - 22727497
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatac 764  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  22727456 aaaagaacaatgttctatttaaattttttaaaagataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 783
Target Start/End: Complemental strand, 7162887 - 7162827
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcg 783  Q
    |||||| | |||||| ||||| |||||||||||||||||||||||||| | ||||||||||    
T  7162887 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcg 7162827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 780
Target Start/End: Original strand, 11952588 - 11952643
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatat 780  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||||    
T  11952588 aaagaacaatgttctatttaaattttttaaaagat-aatacaaagtgtcgtatatat 11952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 732 - 799
Target Start/End: Complemental strand, 3953100 - 3953033
Alignment:
Q  732 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| ||||| |||||||||||||||||||||||||| | |||| ||||| |||||| | ||||||    
T  3953100 atgttctatttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtga 3953033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 731 - 790
Target Start/End: Original strand, 8907086 - 8907145
Alignment:
Q  731 aatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    ||||||| ||||| |||||||||||||||||||||||| | | |||||||||| ||||||    
T  8907086 aatgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacc 8907145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 10762565 - 10762640
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||| |||||||| ||||| ||||||||||||||||||| ||||||   |||||||| | |||||| ||||||||    
T  10762565 aaagagcaatgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtga 10762640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 745 - 799
Target Start/End: Original strand, 5952736 - 5952790
Alignment:
Q  745 attttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  5952736 attttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 5952790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 730 - 797
Target Start/End: Original strand, 27506746 - 27506813
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggt 797  Q
    ||||| || ||||| ||||||||||||||||||| |||||| | |||||||| | |||||| ||||||    
T  27506746 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggt 27506813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 1e-28; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 723 - 831
Target Start/End: Complemental strand, 7398555 - 7398440
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||       || | |||||||||||    
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgagg 7398456  T
Q  816 aacctcaaaccaccct 831  Q
    ||||||||||||||||    
T  7398455 aacctcaaaccaccct 7398440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 27237421 - 27237536
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||| |||  | ||||||||||       || |||||||||||||    
T  27237421 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgagg 27237520  T
Q  816 aacctcaaaccaccct 831  Q
    ||||||||||||||||    
T  27237521 aacctcaaaccaccct 27237536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 723 - 789
Target Start/End: Original strand, 2611260 - 2611326
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacac 789  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  2611260 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacac 2611326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 19692198 - 19692122
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||||||||    
T  19692198 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtga 19692122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 23744900 - 23744828
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaag 795  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||| |  ||||||||| |||||||||||    
T  23744900 aaaagaacaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaag 23744828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 29077324 - 29077248
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||||| |||||| | ||||||    
T  29077324 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtga 29077248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 724 - 779
Target Start/End: Original strand, 6765680 - 6765735
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatata 779  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  6765680 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatata 6765735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 21763586 - 21763661
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||| ||||| |||||||||||||||||||||||||||| || || ||||||||||||||||| ||| ||||    
T  21763586 aaagaacattgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtga 21763661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 33162338 - 33162413
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||| ||||| || ||||| |||||||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  33162338 aaagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtga 33162413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 726 - 831
Target Start/End: Complemental strand, 23859174 - 23859062
Alignment:
Q  726 agaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaac 818  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||  | ||||||||||||||||| |||| |||       || |||||||||||||| |    
T  23859174 agaataatgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgaggatc 23859075  T
Q  819 ctcaaaccaccct 831  Q
    |||||||||||||    
T  23859074 ctcaaaccaccct 23859062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 725 - 799
Target Start/End: Original strand, 36902924 - 36902998
Alignment:
Q  725 aagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||| ||||||||   |||||||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtga 36902998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 724 - 831
Target Start/End: Original strand, 9021799 - 9021912
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagga 816  Q
    |||||||||| | | |||||||||||||||||||||||||||| ||| | |||||||||| |||||| ||||||||       || |||||||||||||     
T  9021799 aaagaacaatttgctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagg- 9021897  T
Q  817 acctcaaaccaccct 831  Q
    |||||||||||||||    
T  9021898 acctcaaaccaccct 9021912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 26254097 - 26254025
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaag 795  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| ||||    
T  26254097 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaag 26254025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 48983842 - 48983918
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||| ||||||| || ||||| ||||||||||||||||||| |||||||| |||||||||| |||||| ||||||||    
T  48983842 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtga 48983918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 723 - 790
Target Start/End: Original strand, 8171537 - 8171604
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| ||||||    
T  8171537 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 8171604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 723 - 790
Target Start/End: Original strand, 18776764 - 18776831
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| ||||||    
T  18776764 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 18776831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 723 - 831
Target Start/End: Complemental strand, 12981430 - 12981315
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||  |||||||| ||| |||||  ||||||||       ||  ||||| ||||||    
T  12981430 aaaagaagaatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgagg 12981331  T
Q  816 aacctcaaaccaccct 831  Q
    ||||||||||||||||    
T  12981330 aacctcaaaccaccct 12981315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 727 - 831
Target Start/End: Complemental strand, 18201237 - 18201126
Alignment:
Q  727 gaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacc 819  Q
    |||||||| || ||||||||||||||||| ||||||||||| || |||||||||| | ||||||||| |||||       || | || ||||||||||||    
T  18201237 gaacaatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacc 18201138  T
Q  820 tcaaaccaccct 831  Q
    ||||||||||||    
T  18201137 tcaaaccaccct 18201126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 20091279 - 20091355
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||| ||||||| || ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  20091279 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtga 20091355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 723 - 766
Target Start/End: Original strand, 12419493 - 12419536
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaa 766  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  12419493 aaaagaacaatgttctatttaaattttttaaaagataaatacaa 12419536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 780
Target Start/End: Original strand, 9014177 - 9014233
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatat 780  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||||  |||||||    
T  9014177 aaagaacaatgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 739 - 795
Target Start/End: Complemental strand, 20153289 - 20153233
Alignment:
Q  739 atttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaag 795  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||| ||| ||||    
T  20153289 atttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaag 20153233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 747 - 799
Target Start/End: Complemental strand, 38971333 - 38971281
Alignment:
Q  747 tttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||| ||||    
T  38971333 tttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtga 38971281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 728 - 799
Target Start/End: Original strand, 24525688 - 24525759
Alignment:
Q  728 aacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||| ||||| ||||||||||||||||||| |||||| | | |||||||| |||||| ||| ||||    
T  24525688 aacaatgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtga 24525759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 723 - 789
Target Start/End: Complemental strand, 10955588 - 10955522
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacac 789  Q
    |||||| | |||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||    
T  10955588 aaaagagcgatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacac 10955522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 723 - 789
Target Start/End: Complemental strand, 28749813 - 28749747
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacac 789  Q
    |||||| |||| ||| ||||| |||||| ||||||||||||||||||| | |||||||||| |||||    
T  28749813 aaaagagcaatattctatttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacac 28749747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 746 - 799
Target Start/End: Original strand, 23551092 - 23551145
Alignment:
Q  746 ttttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||||||||||| |||||||| |||||||||| |||| | ||||||||    
T  23551092 ttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtga 23551145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 674 - 782
Target Start/End: Original strand, 23020434 - 23020541
Alignment:
Q  674 tctgtaagtgaaaagatgtttgtaatgaaataaaaaatgtannnnnnnnaaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtca 773  Q
    |||||||||||||||| ||  ||||| ||||||||| ||||        |||||||||| |||  ||||| ||||||||||||||||||| |||||||      
T  23020434 tctgtaagtgaaaagaggtccgtaataaaataaaaa-tgtattttttttaaaagaacaacgtttcatttagattttttaaaagataaatataaggtgttg 23020532  T
Q  774 tatatatgc 782  Q
    |||||||||    
T  23020533 tatatatgc 23020541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 38414874 - 38414950
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| ||| |||| ||||  ||||||||||||||||||| |||||| | |||||||| | |||||| ||||||||    
T  38414874 aaaagagcaacgttctatttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtga 38414950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 730 - 781
Target Start/End: Original strand, 10329415 - 10329466
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatg 781  Q
    |||||||| ||||| ||||||||||||||||||| |||||| | ||||||||    
T  10329415 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatg 10329466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 732 - 799
Target Start/End: Original strand, 12596294 - 12596361
Alignment:
Q  732 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| ||||| ||||||| |||||||||||||||||| | |||||||| | |||||| | ||||||    
T  12596294 atgttctatttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtga 12596361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 730 - 799
Target Start/End: Original strand, 47984974 - 47985044
Alignment:
Q  730 caatgttcaatttaaatttt-ttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||| ||||| ||||| |||||||| ||||| |||||| | |||||||||| |||||| ||||||||    
T  47984974 caatgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtga 47985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 739 - 780
Target Start/End: Original strand, 9014783 - 9014824
Alignment:
Q  739 atttaaattttttaaaagataaatacaaggtgtcatatatat 780  Q
    ||||||||||| |||||||||||||||| ||||| |||||||    
T  9014783 atttaaattttgtaaaagataaatacaatgtgtcgtatatat 9014824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 257 - 372
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||||       || ||||||||||| |    
T  257 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatg 356  T
Q  816 aacctcaaaccaccct 831  Q
    ||||||||||||||||    
T  357 aacctcaaaccaccct 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 2e-24; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 41677172 - 41677288
Alignment:
Q  723 aaaagaacaatgttcaatttaaatttt-ttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgag 814  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||||||       ||  |||||||||||    
T  41677172 aaaagaacaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgag 41677271  T
Q  815 gaacctcaaaccaccct 831  Q
    |||||||||||||||||    
T  41677272 gaacctcaaaccaccct 41677288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 15167414 - 15167529
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| ||||||||||||||||||||||||| || ||||  ||||||||||||||||| ||| ||||       || |||||||||||||    
T  15167414 aaaagaacaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 15167513  T
Q  816 aacctcaaaccaccct 831  Q
    ||||||||||||||||    
T  15167514 aacctcaaaccaccct 15167529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 724 - 831
Target Start/End: Original strand, 39332405 - 39332519
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagga 816  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||||||||||| ||| |||| | ||||||||       || ||||||||||||||    
T  39332405 aaagaacaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgagga 39332504  T
Q  817 acctcaaaccaccct 831  Q
    |||||||||||||||    
T  39332505 acctcaaaccaccct 39332519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 649 - 829
Target Start/End: Original strand, 7944447 - 7944634
Alignment:
Q  649 cgtttctacgaatcag-aagctcgactctgtaagtgaaaagatgtttgtaatgaaataaaaaatgtannnnnnnnaaaagaacaatgttcaatttaaatt 747  Q
    |||| ||||||||||| |||||||| ||||||| |||||||| ||  ||||| ||||||||| ||||        ||||||||||||||  |||||||||    
T  7944447 cgttcctacgaatcaggaagctcgattctgtaattgaaaagaggtccgtaataaaataaaaa-tgtattttttttaaaagaacaatgttttatttaaatt 7944545  T
Q  748 ttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaaaccacc 829  Q
    |||||||| |||||||||||||| | ||||||||   |||||| ||||||||       || |||||||||||||||||||||||||||    
T  7944546 ttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccacc 7944634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 673 - 781
Target Start/End: Original strand, 5973057 - 5973164
Alignment:
Q  673 ctctgtaagtgaaaagatgtttgtaatgaaataaaaaatgtannnnnnnnaaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtc 772  Q
    |||||||| |||||||| || |||||| ||||||||| ||||        ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5973057 ctctgtaaatgaaaagaggtctgtaataaaataaaaa-tgtattcgttttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtc 5973155  T
Q  773 atatatatg 781  Q
     ||||||||    
T  5973156 gtatatatg 5973164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 728 - 795
Target Start/End: Original strand, 23941095 - 23941162
Alignment:
Q  728 aacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaag 795  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  23941095 aacaatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaag 23941162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 30674403 - 30674478
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||||||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||  ||||||||    
T  30674403 aaagaacaatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtga 30674478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 739 - 826
Target Start/End: Complemental strand, 8103000 - 8102906
Alignment:
Q  739 atttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaaacc 826  Q
    ||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||       || ||||||||||||||||||||||||    
T  8103000 atttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacctcaaacc 8102906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 723 - 782
Target Start/End: Complemental strand, 8646309 - 8646250
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgc 782  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  8646309 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatgc 8646250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 723 - 829
Target Start/End: Complemental strand, 11290288 - 11290175
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||   |||||  ||||||||       || ||||||||||||     
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagc 11290189  T
Q  816 aacctcaaaccacc 829  Q
    ||||||||||||||    
T  11290188 aacctcaaaccacc 11290175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 41879285 - 41879209
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||  | |||||||||| |||| | ||||||||    
T  41879285 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtga 41879209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 45475921 - 45475845
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  45475921 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtga 45475845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 5860744 - 5860819
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  5860744 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 5860819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 724 - 779
Target Start/End: Original strand, 14509983 - 14510038
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatata 779  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  14509983 aaagaacaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatata 14510038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 647 - 828
Target Start/End: Complemental strand, 15078938 - 15078750
Alignment:
Q  647 gtcgtttctacgaatcagaag-ctcgactctgtaagtgaaaagatgtttgtaatgaaataaaaaatgtannnnnnnnaaaagaacaatgttcaatttaaa 745  Q
    |||||| ||||||||| |||| |||  ||||||||||||||||| ||  ||||| |||||||||  |||        ||||||| ||||||| |||||||    
T  15078938 gtcgttcctacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaac-gtattttttttaaaagaataatgttctatttaaa 15078840  T
Q  746 ttttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaaaccac 828  Q
     ||||||||||||||||| ||||||   ||||||||| ||||||| ||| ||||       || ||||||||||||||||||||||||||    
T  15078839 atttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccac 15078750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 746 - 831
Target Start/End: Complemental strand, 5942777 - 5942685
Alignment:
Q  746 ttttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaaaccaccct 831  Q
    |||||||||||||||||||||| |||| ||||| |||| |||||| ||||||||       || |||||||||||||||||||||||||||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 5942685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 723 - 797
Target Start/End: Original strand, 23606628 - 23606702
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggt 797  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||||    
T  23606628 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggt 23606702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 723 - 797
Target Start/End: Original strand, 37430157 - 37430231
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggt 797  Q
    |||||| | |||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||||| ||||    
T  37430157 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggt 37430231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 724 - 769
Target Start/End: Complemental strand, 9108596 - 9108551
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggt 769  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  9108596 aaagaacaatgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 10917495 - 10917419
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||| ||||||| || ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  10917495 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtga 10917419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 30883433 - 30883357
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||| ||| | |||||||||| |||||| | ||||||    
T  30883433 aaaagagcaatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtga 30883357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 723 - 790
Target Start/End: Original strand, 2952220 - 2952287
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| |||||||| ||||| |||||||||||||||||||||| ||| | |||||||||| ||||||    
T  2952220 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacc 2952287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 23798261 - 23798336
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||| |||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||| ||||    
T  23798261 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtga 23798336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 724 - 770
Target Start/End: Original strand, 34868177 - 34868223
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtg 770  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||    
T  34868177 aaagaataatgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 739 - 792
Target Start/End: Original strand, 3048532 - 3048585
Alignment:
Q  739 atttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacaccta 792  Q
    ||||| |||||||||||||||||||||||||| | |||||||||| ||||||||    
T  3048532 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccta 3048585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 732 - 831
Target Start/End: Complemental strand, 5721654 - 5721548
Alignment:
Q  732 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaaa 824  Q
    |||||| |||||| ||||||||||||||||||||||||| | ||||||  || |||||| ||| ||||       || ||||||| ||||||||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacctcaaa 5721555  T
Q  825 ccaccct 831  Q
    |||||||    
T  5721554 ccaccct 5721548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 13534686 - 13534761
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||| ||| | |||||||||| |||||| | ||||||    
T  13534686 aaaagagcaatgttctatttatattttttaaaagataaatacaa-gtgccgtatatatgcggtacacccagaggtga 13534761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 13624226 - 13624301
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||| ||| | |||||||||| |||||| | ||||||    
T  13624226 aaaagagcaatgttctatttatattttttaaaagataaatacaa-gtgccgtatatatgcggtacacccagaggtga 13624301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 780
Target Start/End: Original strand, 34048705 - 34048761
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatat 780  Q
    |||||||||||||| |||||||  ||||||||||||||||||| ||||| |||||||    
T  34048705 aaagaacaatgttctatttaaacattttaaaagataaatacaatgtgtcgtatatat 34048761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 34789861 - 34789937
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||| |||||| |||||||| | |||||||||||||||||| |||| ||||||||   |||||| ||||||||    
T  34789861 aaaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtga 34789937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 725 - 831
Target Start/End: Original strand, 25561496 - 25561607
Alignment:
Q  725 aagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaa 817  Q
    ||||| ||||||| |||||||| ||||||| ||||||||||||||| | ||||||||||||| ||| ||| ||||       |  |||||||||||||||    
T  25561496 aagaataatgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaa 25561593  T
Q  818 cctcaaaccaccct 831  Q
    ||||||||||||||    
T  25561594 cctcaaaccaccct 25561607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 723 - 772
Target Start/End: Original strand, 38009151 - 38009200
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtc 772  Q
    ||||||||||||||| ||||||| ||||||||||||||||| || |||||    
T  38009151 aaaagaacaatgttctatttaaaatttttaaaagataaatataacgtgtc 38009200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 730 - 799
Target Start/End: Complemental strand, 42600879 - 42600810
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||| || ||||| ||||||||||||||||||| |||||| | |||||||| | |||||| ||||||||    
T  42600879 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtga 42600810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 673 - 825
Target Start/End: Original strand, 206439 - 206597
Alignment:
Q  673 ctctgtaagtgaaaagatgtttgtaatgaaataaaaaatgtannnnnnnnaaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtc 772  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||         |||||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  206439 ctctgtaagtgaaaagaggtttgtaataaaataaaaa-tgtatttttttttaaagaagaatgttctatttaaattttgtaaaagataaatacaaggtgtc 206537  T
Q  773 atatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaaac 825  Q
     |||||||||| |||||| || |||||       || |||||||||||||||||||||||    
T  206538 gtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacctcaaac 206597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 6e-24; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 723 - 831
Target Start/End: Complemental strand, 34426007 - 34425892
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||| | |||||||| ||||||||||||| | |       || |||||||||||||    
T  34426007 aaaagaacaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgagg 34425908  T
Q  816 aacctcaaaccaccct 831  Q
    ||||||||||||||||    
T  34425907 aacctcaaaccaccct 34425892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 724 - 831
Target Start/End: Original strand, 14318382 - 14318496
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagga 816  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| | |||  |||       || ||||||||||||||    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgagga 14318481  T
Q  817 acctcaaaccaccct 831  Q
    |||||||||||||||    
T  14318482 acctcaaaccaccct 14318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 724 - 799
Target Start/End: Complemental strand, 7338102 - 7338027
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  7338102 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtga 7338027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 1366522 - 1366637
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| |||  ||||||||||||||||||||| ||||       || |||||| ||||||    
T  1366522 aaaagaacaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgagg 1366621  T
Q  816 aacctcaaaccaccct 831  Q
    ||||||| ||||||||    
T  1366622 aacctcataccaccct 1366637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 36868872 - 36868987
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||| | |||||| ||| ||||       || |||||||||||||    
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgagg 36868971  T
Q  816 aacctcaaaccaccct 831  Q
    || |||||||||||||    
T  36868972 aatctcaaaccaccct 36868987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 27079115 - 27079039
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  27079115 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtga 27079039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 730 - 799
Target Start/End: Original strand, 16198797 - 16198866
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||    
T  16198797 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtga 16198866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 724 - 831
Target Start/End: Complemental strand, 2412191 - 2412077
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagga 816  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||||| || | ||| ||||       ||  |||||||||||||    
T  2412191 aaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgagga 2412092  T
Q  817 acctcaaaccaccct 831  Q
    |||||||||||||||    
T  2412091 acctcaaaccaccct 2412077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 38869359 - 38869435
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||||| |||||||||| |||||| ||||||||    
T  38869359 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtga 38869435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 26718946 - 26719021
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| ||||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||  ||||||||    
T  26718946 aaagaataatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtga 26719021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 26988690 - 26988765
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| ||||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||  ||||||||    
T  26988690 aaagaataatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtga 26988765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 723 - 829
Target Start/End: Complemental strand, 33037884 - 33037771
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| | || ||||||||   |||||| ||||||||       || |||||||||||||    
T  33037884 aaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgagg 33037785  T
Q  816 aacctcaaaccacc 829  Q
    ||||||||||||||    
T  33037784 aacctcaaaccacc 33037771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 723 - 772
Target Start/End: Complemental strand, 606258 - 606209
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtc 772  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  606258 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtc 606209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 2024638 - 2024710
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaag 795  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||| | |||||||| |||||||| ||||    
T  2024638 aaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaag 2024710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 725 - 781
Target Start/End: Original strand, 22648734 - 22648790
Alignment:
Q  725 aagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatg 781  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatg 22648790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 28822338 - 28822414
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  28822338 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtga 28822414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 34756362 - 34756438
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  34756362 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 34756438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 723 - 781
Target Start/End: Complemental strand, 10407565 - 10407507
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatg 781  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||| || |||||    
T  10407565 aaaagaacaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatg 10407507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 723 - 789
Target Start/End: Complemental strand, 30854433 - 30854367
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacac 789  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||    
T  30854433 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacac 30854367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 724 - 790
Target Start/End: Original strand, 41911614 - 41911680
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||||||||||||| |||| |||||||||||| |||||||||||||| |||||| ||| ||||||    
T  41911614 aaagaacaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacc 41911680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 731 - 831
Target Start/End: Original strand, 2530901 - 2531008
Alignment:
Q  731 aatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaa 823  Q
    ||||||| |||||| ||||||||||||||||||||| ||||| ||||||| || |||| | ||||||||       ||  ||||||||||||||||||||    
T  2530901 aatgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacctcaa 2531000  T
Q  824 accaccct 831  Q
    ||||||||    
T  2531001 accaccct 2531008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 730 - 799
Target Start/End: Complemental strand, 9364388 - 9364319
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  9364388 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtga 9364319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 730 - 799
Target Start/End: Original strand, 40389539 - 40389608
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||| ||||| ||||||||||||||||||| |||||||| |||||||||| |||| | ||||||||    
T  40389539 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtga 40389608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 16592070 - 16592146
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| ||||| ||||||||||||||| |||||| |||||||||| |||||| | ||||||    
T  16592070 aaaagagcaatgttctatttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtga 16592146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 731 - 799
Target Start/End: Complemental strand, 24395835 - 24395767
Alignment:
Q  731 aatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||| |||||||||||||||||||||||||||||||||  ||||||| | ||||| | ||||||||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtga 24395767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 723 - 783
Target Start/End: Original strand, 31194608 - 31194668
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcg 783  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | ||||||||||    
T  31194608 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcg 31194668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 724 - 799
Target Start/End: Complemental strand, 10543776 - 10543701
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| ||||||| | ||||||||||||||||||||||| ||||||   ||||||||||||||| | ||||||||    
T  10543776 aaagaataatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtga 10543701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 732 - 799
Target Start/End: Original strand, 15480094 - 15480161
Alignment:
Q  732 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| ||||| ||||||||||||||||||||||| |||| |||||||||| |||||| | ||||||    
T  15480094 atgttctatttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtga 15480161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 733 - 799
Target Start/End: Complemental strand, 19523293 - 19523227
Alignment:
Q  733 tgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  19523293 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 19523227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 11242314 - 11242429
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtg-------atagcgtatacatgagg 815  Q
    ||||||||||||||| |||||| |||||||||||||||||||||  ||   |||||||| |||||| | |||| ||        || |||||||||||||    
T  11242314 aaaagaacaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgagg 11242413  T
Q  816 aacctcaaaccaccct 831  Q
    ||||||||||||||||    
T  11242414 aacctcaaaccaccct 11242429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 40794323 - 40794438
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||  ||||||||||||||||||| |||||||| | | | || ||||  |||||||| ||||||||       || ||||||||||||     
T  40794323 aaaagaacaatgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgaga 40794422  T
Q  816 aacctcaaaccaccct 831  Q
    ||||||||||||||||    
T  40794423 aacctcaaaccaccct 40794438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 2274994 - 2274918
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| | |||||| ||||| ||||||||||||||||||||||||| || |||||||||  |||||| | ||||||    
T  2274994 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtga 2274918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 731 - 799
Target Start/End: Original strand, 16799331 - 16799399
Alignment:
Q  731 aatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||| ||||| ||||||||||| ||||||| |||||| | |||||||||| |||||| ||||||||    
T  16799331 aatgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtga 16799399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 795
Target Start/End: Complemental strand, 17345060 - 17344988
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaag 795  Q
    |||| |||||||||| |||||||||||||| |  ||||||||||| |||||| |||||||| |||||| ||||    
T  17345060 aaaataacaatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaag 17344988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 22986554 - 22986630
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||| | ||||||||||||| |||||||| ||||| |||||||||| |||||| | ||||||    
T  22986554 aaaagagcaatgttctattaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtga 22986630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 795
Target Start/End: Original strand, 23284058 - 23284130
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaag 795  Q
    |||||| |||||||| ||||| ||||||||||   ||||||||||||||| |||||||||| |||||| ||||    
T  23284058 aaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaag 23284130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 767
Target Start/End: Complemental strand, 27530587 - 27530543
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaag 767  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||    
T  27530587 aaaagaacaatgttctatttaaattttttaaaagattaatacaag 27530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 783
Target Start/End: Original strand, 31881430 - 31881490
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcg 783  Q
    |||||| |||||||| ||||| ||||||||||||||||||||| |||| | ||||||||||    
T  31881430 aaaagagcaatgttctatttatattttttaaaagataaatacacggtgccgtatatatgcg 31881490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 36187875 - 36187951
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| | |||||| ||||| ||||||||||| |||||||||||||| | |||||||||| |||||| | ||||||    
T  36187875 aaaagagcgatgttctatttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtga 36187951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 724 - 788
Target Start/End: Complemental strand, 15639749 - 15639682
Alignment:
Q  724 aaagaacaatgttcaattta---aattttttaaaagataaatacaaggtgtcatatatatgcgataca 788  Q
    ||||||||||||||||||||     |||||| |||||||||||||||||| | |||||||||||||||    
T  15639749 aaagaacaatgttcaatttattttttttttttaaagataaatacaaggtgacgtatatatgcgataca 15639682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 649 - 763
Target Start/End: Original strand, 35080694 - 35080806
Alignment:
Q  649 cgtttctacgaatc-agaagctcgactctgtaagtgaaaagatgtttgtaatgaaataaaaaatgtannnnnnnnaaaagaacaatgttcaatttaaatt 747  Q
    |||| ||||||||| ||| ||||||||||||||||||||||| |   ||||| |||||||||   ||        ||||||||||||||  |||||||||    
T  35080694 cgttcctacgaatctagaggctcgactctgtaagtgaaaagagggccgtaataaaataaaaa---tattttttttaaaagaacaatgttttatttaaatt 35080790  T
Q  748 ttttaaaagataaata 763  Q
    ||||||||||||||||    
T  35080791 ttttaaaagataaata 35080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 728 - 766
Target Start/End: Complemental strand, 22875041 - 22875003
Alignment:
Q  728 aacaatgttcaatttaaattttttaaaagataaatacaa 766  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  22875041 aacaatattctatttaaattttttaaaagataaatacaa 22875003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 739 - 797
Target Start/End: Complemental strand, 27924170 - 27924112
Alignment:
Q  739 atttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggt 797  Q
    ||||| ||||||||||||||||||| |||||| | |||||||||| |||| | ||||||    
T  27924170 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggt 27924112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 728 - 831
Target Start/End: Complemental strand, 39024 - 38914
Alignment:
Q  728 aacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacct 820  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||||       || |||||| |||||||||||    
T  39024 aacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacct 38925  T
Q  821 caaaccaccct 831  Q
    |||||||||||    
T  38924 caaaccaccct 38914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 106642 - 106566
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||||| |||||||||| |||||| ||||||||    
T  106642 aaaagaacaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtga 106566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 724 - 799
Target Start/End: Original strand, 23993 - 24068
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||||    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtga 24068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 723 - 829
Target Start/End: Complemental strand, 45758609 - 45758496
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||  ||||| | ||||||||       || |||||||||||||    
T  45758609 aaaagaacaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgagg 45758510  T
Q  816 aacctcaaaccacc 829  Q
    ||||||||||||||    
T  45758509 aacctcaaaccacc 45758496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 39134720 - 39134836
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaa-gataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgag 814  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||   ||||||||| ||||||| ||||||||       ||  |||||||||||    
T  39134720 aaaagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgag 39134819  T
Q  815 gaacctcaaaccaccct 831  Q
    |||||||||||||||||    
T  39134820 gaacctcaaaccaccct 39134836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 724 - 831
Target Start/End: Original strand, 38547035 - 38547149
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagga 816  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||| | |||||||| | |||||| ||| ||||       || | ||||||||||||    
T  38547035 aaagatcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgagga 38547134  T
Q  817 acctcaaaccaccct 831  Q
    |||||||||||||||    
T  38547135 acctcaaaccaccct 38547149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 50881545 - 50881469
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||||| |||| ||| ||||||    
T  50881545 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtga 50881469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 723 - 790
Target Start/End: Complemental strand, 44655856 - 44655789
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||||| ||||||    
T  44655856 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacc 44655789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 724 - 831
Target Start/End: Complemental strand, 26804059 - 26803948
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagga 816  Q
    ||||||||||| |  ||||||||||||||||||||||||||||| |||| ||||||||||||||||   |||||||       || |||||||||||| |    
T  26804059 aaagaacaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaa 26803963  T
Q  817 acctcaaaccaccct 831  Q
    |||||||||||||||    
T  26803962 acctcaaaccaccct 26803948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 730 - 799
Target Start/End: Complemental strand, 27559745 - 27559676
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||| ||||| ||||||||||||||||||| |||||||| |||||||||| |||||| ||||||||    
T  27559745 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtga 27559676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 5027664 - 5027588
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  5027664 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtga 5027588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 5316795 - 5316719
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  5316795 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 5316719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Original strand, 21740935 - 21741011
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||  |||||||||||||||||||||||||| | ||||||||||||||||| | ||||||    
T  21740935 aaaagagcaatgttctatttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtga 21741011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 723 - 799
Target Start/End: Complemental strand, 23185542 - 23185466
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  23185542 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtga 23185466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 732 - 799
Target Start/End: Complemental strand, 16140161 - 16140094
Alignment:
Q  732 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| ||||| |||||||||||||||||||||||||||  |||||||||| |||||||| ||||||    
T  16140161 atgttctatttatattttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtga 16140094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 723 - 781
Target Start/End: Complemental strand, 38853637 - 38853579
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatg 781  Q
    ||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  38853637 aaaagaacagtgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatg 38853579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 730 - 799
Target Start/End: Complemental strand, 17169064 - 17168995
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||| ||||| ||||||||||||||||||| |||||||  |||||||||| |||||| ||||||||    
T  17169064 caatgttctatttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtga 17168995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 732 - 799
Target Start/End: Complemental strand, 6771897 - 6771830
Alignment:
Q  732 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||| ||||| |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  6771897 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtga 6771830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 728 - 799
Target Start/End: Original strand, 9173026 - 9173097
Alignment:
Q  728 aacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||| | ||||||||    
T  9173026 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtga 9173097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 728 - 799
Target Start/End: Original strand, 9181008 - 9181079
Alignment:
Q  728 aacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    |||||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||| | ||||||||    
T  9181008 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtga 9181079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 723 - 790
Target Start/End: Complemental strand, 14146415 - 14146348
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| | |||||| ||||| |||||||||||||||||||||||||| | |||||||||| ||||||    
T  14146415 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 14146348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 647 - 829
Target Start/End: Original strand, 43235690 - 43235881
Alignment:
Q  647 gtcgtttctacgaatcagaag-ctcgactctgtaagtgaaaagatgtttgtaatgaaataaaaaatgtannnnnnnnaaaagaacaatgttcaatttaaa 745  Q
    |||||| ||||||||| |||  ||||||| |||||||||||||| |  |||||| ||||||||| ||||         |||||| ||||||| |||||||    
T  43235690 gtcgttcctacgaatccgaatactcgactttgtaagtgaaaagaggcctgtaataaaataaaaa-tgtatttttttctaaagaaaaatgttctatttaaa 43235788  T
Q  746 tttttta--aaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaaaccacc 829  Q
    ||||||   ||||||||||||||| |||| ||||||||   |||||| ||||||||       || |||||||||||||||||||||||||||    
T  43235789 tttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacctcaaaccacc 43235881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 725 - 795
Target Start/End: Original strand, 1366878 - 1366948
Alignment:
Q  725 aagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaag 795  Q
    |||| |||||||| ||||| ||||||||||||||||||| |||||| | |||||||||| |||||| ||||    
T  1366878 aagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaag 1366948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 724 - 790
Target Start/End: Original strand, 4971617 - 4971683
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||  | |||||||||| ||||||    
T  4971617 aaagagcaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacc 4971683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 739 - 797
Target Start/End: Original strand, 40501804 - 40501862
Alignment:
Q  739 atttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggt 797  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||| |||||| ||||||    
T  40501804 atttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggt 40501862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 723 - 788
Target Start/End: Complemental strand, 6889726 - 6889661
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgataca 788  Q
    |||||| |||||||| ||||| |||||||||||||||||||||| || || |||||||||| ||||    
T  6889726 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 6889661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 723 - 788
Target Start/End: Complemental strand, 6891572 - 6891507
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgataca 788  Q
    |||||| |||||||| ||||| |||||||||||||||||||||| || || |||||||||| ||||    
T  6891572 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtaca 6891507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 724 - 831
Target Start/End: Complemental strand, 6221791 - 6221678
Alignment:
Q  724 aaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagga 816  Q
    |||||||||||||| |||||||| ||||||||||||||||||| ||| | |||||| ||| |||| | ||| ||||       || |||||| |||||||    
T  6221791 aaagaacaatgttctatttaaat-ttttaaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgagga 6221693  T
Q  817 acctcaaaccaccct 831  Q
    |||||||||||||||    
T  6221692 acctcaaaccaccct 6221678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 723 - 782
Target Start/End: Complemental strand, 3406533 - 3406474
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgc 782  Q
    |||||| | |||||| ||||| |||||||||||||||||||||||||| | |||||||||    
T  3406533 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgc 3406474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 723 - 782
Target Start/End: Original strand, 3440287 - 3440346
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgc 782  Q
    |||||| | |||||| ||||| |||||||||||||||||||||||||| | |||||||||    
T  3440287 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgc 3440346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 723 - 770
Target Start/End: Original strand, 27906727 - 27906774
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtg 770  Q
    |||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  27906727 aaaagagcaatgttccatttatattttttaaaagataaatacaaggtg 27906774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 723 - 797
Target Start/End: Complemental strand, 50146411 - 50146337
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggt 797  Q
    ||||||||||||||| ||||||| ||||| |||||||||| ||||||| | | |||||| |||| ||| ||||||    
T  50146411 aaaagaacaatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggt 50146337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 730 - 799
Target Start/End: Complemental strand, 19955825 - 19955756
Alignment:
Q  730 caatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||| || ||||| ||||||||||||||||||| |||||  | |||||||||| |||||| ||||||||    
T  19955825 caatgatctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtga 19955756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 723 - 831
Target Start/End: Complemental strand, 33170874 - 33170759
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    |||| |||||||||  |||||||||||||||||  ||||||||| ||||  |||||||||| |||||| || |||||       || ||||||||||||     
T  33170874 aaaaaaacaatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgaga 33170775  T
Q  816 aacctcaaaccaccct 831  Q
    ||||| ||||||||||    
T  33170774 aaccttaaaccaccct 33170759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 723 - 783
Target Start/End: Original strand, 17322621 - 17322681
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcg 783  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||| ||  | ||||||||||    
T  17322621 aaaagaacaatgttctatttatatttttttaaagataaatacaatgtagcgtatatatgcg 17322681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 723 - 767
Target Start/End: Original strand, 22865459 - 22865503
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaag 767  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||    
T  22865459 aaaagagcaatgttctatttatattttttaaaagataaatacaag 22865503  T

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Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 723 - 781
Target Start/End: Complemental strand, 5533428 - 5533369
Alignment:
Q  723 aaaagaacaatgttcaatttaaatttttt-aaaagataaatacaaggtgtcatatatatg 781  Q
    ||||||||||| ||| ||||||||||||| |||||||||| |||||||| | ||||||||    
T  5533428 aaaagaacaatattctatttaaatttttttaaaagataaacacaaggtgccgtatatatg 5533369  T

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Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 723 - 782
Target Start/End: Original strand, 41697135 - 41697194
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgc 782  Q
    |||||| | |||||| ||||| |||||||||||||||||||||| || || |||||||||    
T  41697135 aaaagagcgatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgc 41697194  T

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Target: scaffold0018 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 729 - 797
Target Start/End: Original strand, 173515 - 173583
Alignment:
Q  729 acaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggt 797  Q
    ||||||||| |||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||    
T  173515 acaatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggt 173583  T

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Target: scaffold0007 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 723 - 831
Target Start/End: Original strand, 230858 - 230973
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 815  Q
    ||||||||||||||| |||||||||| |||||||||||||  |||||||  ||||||||||||| ||| ||||||||       || | |||||||||||    
T  230858 aaaagaacaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgagg 230957  T
Q  816 aacctcaaaccaccct 831  Q
    ||| ||||||||||||    
T  230958 aacttcaaaccaccct 230973  T

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Target: scaffold1320 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 647 - 828
Target Start/End: Complemental strand, 1534 - 1346
Alignment:
Q  647 gtcgtttctacgaatcagaag-ctcgactctgtaagtgaaaagatgtttgtaatgaaataaaaaatgtannnnnnnnaaaagaacaatgttcaatttaaa 745  Q
    |||||| ||||||||| |||| |||  ||||||||||||||||| ||  ||||| |||||||||  |||        ||||||| ||||||| |||||||    
T  1534 gtcgttcctacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaac-gtattttttttaaaagaataatgttctatttaaa 1436  T
Q  746 ttttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgaggaacctcaaaccac 828  Q
     ||||||||||||||||| ||||||   ||||||||| ||||||| ||| ||||       || ||||||||||||||||||||||||||    
T  1435 atttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccac 1346  T

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Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 723 - 790
Target Start/End: Complemental strand, 1447 - 1380
Alignment:
Q  723 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacc 790  Q
    |||||| || ||||| ||||| ||||||||||||||||||||||| || | |||||||||| ||||||    
T  1447 aaaagagcactgttctatttatattttttaaaagataaatacaagctgccgtatatatgcggtacacc 1380  T

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Target: scaffold0227 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 731 - 769
Target Start/End: Complemental strand, 16161 - 16123
Alignment:
Q  731 aatgttcaatttaaattttttaaaagataaatacaaggt 769  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  16161 aatgttctatttaaattttttaaaagataaatacaaggt 16123  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000008; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 723 - 770
Target Start/End: Complemental strand, 40191 - 40142
Alignment:
Q  723 aaaagaacaatgttcaatttaaatttttt--aaaagataaatacaaggtg 770  Q
    ||||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  40191 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtg 40142  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 723 - 770
Target Start/End: Complemental strand, 138251 - 138202
Alignment:
Q  723 aaaagaacaatgttcaatttaaatttttt--aaaagataaatacaaggtg 770  Q
    ||||||||||||||| |||||| ||||||  |||||||||||||||||||    
T  138251 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtg 138202  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 750 - 799
Target Start/End: Original strand, 351360 - 351409
Alignment:
Q  750 ttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 799  Q
    ||||||||||||||||||||||| ||||||||   |||||| ||||||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtga 351409  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 732 - 781
Target Start/End: Complemental strand, 183155 - 183106
Alignment:
Q  732 atgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatg 781  Q
    |||||| ||||| |||||||||||||||||||||| || || ||||||||    
T  183155 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 183106  T

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