View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4408_low_8 (Length: 249)
Name: NF4408_low_8
Description: NF4408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4408_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 31690756 - 31690996
Alignment:
| Q |
1 |
caattaagccatcacaaatccttcaaaccattaaggaaaattaatttgagatactttcatccca--agtggtcccacttataattcgaactgggcatggt |
98 |
Q |
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| T |
31690756 |
caattaagccttcacaaatccttcaaaccattaaggaaaattaatttgagatattttcatcccctgagtggtcccacttataattcgaactgggcattac |
31690855 |
T |
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| Q |
99 |
attcctctactgagccagttttatttttactcaacaataattcgtaaggactttgaagcattgaaggttgaaatctttgaataagggccga-ttgaattc |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
31690856 |
cttcctctactgagccagttttatttttactcaacaataattcgtaaggactttgaagcattgaaggttgaaatctttgaataagggccgatttgaattc |
31690955 |
T |
|
| Q |
198 |
ttcaaatttattttattcaattacaacattattcttgaata |
238 |
Q |
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||||||||| ||||||||||||||||||||||||| ||||| |
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| T |
31690956 |
ttcaaatttcttttattcaattacaacattattctagaata |
31690996 |
T |
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