View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4411_high_3 (Length: 580)

Name: NF4411_high_3
Description: NF4411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4411_high_3
NF4411_high_3
[»] chr1 (3 HSPs)
chr1 (15-580)||(34118327-34118896)
chr1 (27-137)||(616069-616179)
chr1 (37-140)||(39708517-39708623)
[»] chr5 (7 HSPs)
chr5 (26-153)||(7766634-7766761)
chr5 (15-116)||(18697281-18697382)
chr5 (27-108)||(6030064-6030145)
chr5 (26-125)||(41355203-41355302)
chr5 (34-93)||(7272145-7272204)
chr5 (27-98)||(26657073-26657147)
chr5 (27-98)||(26928661-26928735)
[»] chr4 (3 HSPs)
chr4 (26-153)||(53202632-53202759)
chr4 (28-125)||(23053893-23053990)
chr4 (27-137)||(47518097-47518206)
[»] chr8 (1 HSPs)
chr8 (15-138)||(10409179-10409302)
[»] chr2 (7 HSPs)
chr2 (15-139)||(17281589-17281713)
chr2 (26-153)||(1551219-1551346)
chr2 (15-115)||(4140751-4140851)
chr2 (26-125)||(17375639-17375738)
chr2 (34-109)||(34660565-34660643)
chr2 (61-115)||(1895757-1895811)
chr2 (27-97)||(4869953-4870022)
[»] chr6 (2 HSPs)
chr6 (16-116)||(20740943-20741043)
chr6 (26-125)||(21881834-21881933)
[»] chr3 (1 HSPs)
chr3 (27-130)||(18269501-18269604)
[»] chr7 (1 HSPs)
chr7 (40-139)||(3302958-3303057)


Alignment Details
Target: chr1 (Bit Score: 373; Significance: 0; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 15 - 580
Target Start/End: Original strand, 34118327 - 34118896
Alignment:
Q  15 cagagacccaagtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttt 114  Q
    |||||||||  ||||||| |||||| ||||||||||||| ||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  34118327 cagagaccctcgtcgcaccaccatctatttgatctacattatgccgacgggggatttagaatttgtgtgaggaagaaaggagtacggcggtcctaggttt 34118426  T
Q  115 aaagagaaaggtgtacaacggctatctcttatgtttgttcttaaaaggagtacggtggctagaaagtacaaataattaatgacattcataataggttata 214  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||   |||||||||||| ||||||||||||||||||||||||||||||    
T  34118427 aaagagaaaggtgtacaacggctatctcttatgtttgttcatcaaaggagtacgacagctagaaagtacgaataattaatgacattcataataggttata 34118526  T
Q  215 tcattaggggaagttgaattttaatcccaactataataa-tttttaattaaattttatttaacttccaatcaaattcagaattacgaatgtccctgatct 313  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  34118527 tcattaggggaagttgaattttaatcccaactaaaataattttttaattaaattttatttaacttccaaccaaattcagaa-tactaatgtccctgatct 34118625  T
Q  314 cctaaatatgaaagggttgagat--nnnnnnnctatattcaacttcacccaaatttataaaactatgaacatgtcttctcta--nnnnnnnnnnnnnnnn 409  Q
    |||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||                      
T  34118626 cctaaatatgaaagggttgagataaaaaaaaactatattcaacttcacccaaatttataaaactatgaacatgtcttctctattttattttatttttttt 34118725  T
Q  410 aaaatgtgtcatatataatcttatccttagacagcacaatcttgtccttttctttgatttagctaaccaatcaaattataaagtcatcaaactt-aaaaa 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34118726 aaaatgtgtcatatataatcttatccttagacagcacaatcttgtccttttctttgatttagctaaccaatcaaattataaagtcatcaaacttaaaaaa 34118825  T
Q  509 atacattacaaaataagtagtgattagagtaaaagaagtgggtgaccacaccacagaagcaaaacaagagcc 580  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34118826 atacattac-aaataagtagtgattagagtaaaagaagtgggtgaccacaccacagaagcaaaacaagagcc 34118896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 616069 - 616179
Alignment:
Q  27 tcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaaggt 126  Q
    |||||| |||||||||||||||||||||| ||||  || ||||||||||||||||||||||||||||||||| ||| |||||| |||||  ||||||||     
T  616069 tcgcaccaccatccatttgatctacatgacggcgacggtggatttggaatttgtgtgaggaagaaaggagtagggcagtcctaggtttattgagaaagga 616168  T
Q  127 gtacaacggct 137  Q
    ||| |||||||    
T  616169 gtaaaacggct 616179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 39708623 - 39708517
Alignment:
Q  37 atccatttgatctacatga---tggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaaggtgtacaac 133  Q
    |||||||| ||||||||||   |||||| || ||||||| |||||| ||||||||||||||||| ||| ||||||| || || ||||||||| |||| ||    
T  39708623 atccattttatctacatgacgatggcggcggcggatttgaaatttgggtgaggaagaaaggagtgcggaggtcctaggtatagagagaaaggagtacgac 39708524  T
Q  134 ggctatc 140  Q
    | |||||    
T  39708523 gactatc 39708517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 7766761 - 7766634
Alignment:
Q  26 gtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg 125  Q
    ||||||| |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| | || ||||||    
T  7766761 gtcgcaccaccatccattagatctacatgatggcggcggcggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaggttaagagtgaaagg 7766662  T
Q  126 tgtacaacggctatctcttatgtttgtt 153  Q
     |||||||||||||||||||||||||||    
T  7766661 agtacaacggctatctcttatgtttgtt 7766634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 18697281 - 18697382
Alignment:
Q  15 cagagacccaagtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttt 114  Q
    |||||||||  ||||||| |||||||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||||||||| |||||||| ||||    
T  18697281 cagagaccctcgtcgcaccaccatccatttgatctacgtgatggcggcggcggatttgaaatttgtgtgaggaagaaaggagtacgacggtcctaggttt 18697380  T
Q  115 aa 116  Q
    ||    
T  18697381 aa 18697382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 6030145 - 6030064
Alignment:
Q  27 tcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcct 108  Q
    |||||| ||||||||||||||||| |||||||||| |  | ||||||||||||||||||||||||||||||| ||| |||||    
T  6030145 tcgcaccaccatccatttgatctatatgatggcggcgacgaatttggaatttgtgtgaggaagaaaggagtagggcagtcct 6030064  T

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Target: chr5; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 41355302 - 41355203
Alignment:
Q  26 gtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg 125  Q
    ||||||| |||||||||||||||||||||||| ||  |    |||| ||||||||||||||||||||||||||| ||||| ||| ||||| | |||||||    
T  41355302 gtcgcaccaccatccatttgatctacatgatgacgacgacaaatttagaatttgtgtgaggaagaaaggagtaccgcggttctaggtttagaaagaaagg 41355203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 7272145 - 7272204
Alignment:
Q  34 accatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaag 93  Q
    |||||||||||||||||||||| ||||  |  ||||||||||||||||||||||||||||    
T  7272145 accatccatttgatctacatgacggcgacgacggatttggaatttgtgtgaggaagaaag 7272204  T

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Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 26657073 - 26657147
Alignment:
Q  27 tcgcacgaccatccatttgatctacatgatggcggtgggg---gatttggaatttgtgtgaggaagaaaggagta 98  Q
    |||||| |||||||||||||||||||||| | ||  |  |   ||||||||||||||||||||||||||||||||    
T  26657073 tcgcaccaccatccatttgatctacatgacgacgacgacgacagatttggaatttgtgtgaggaagaaaggagta 26657147  T

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Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 26928661 - 26928735
Alignment:
Q  27 tcgcacgaccatccatttgatctacatgatggcggtgggg---gatttggaatttgtgtgaggaagaaaggagta 98  Q
    |||||| |||||||||||||||||||||| | ||  |  |   ||||||||||||||||||||||||||||||||    
T  26928661 tcgcaccaccatccatttgatctacatgacgacgacgacgacagatttggaatttgtgtgaggaagaaaggagta 26928735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 53202632 - 53202759
Alignment:
Q  26 gtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg 125  Q
    ||||||| |||||||||||||||||||||||| ||| || ||||||  ||||||||||||||||||||||||||||||||  || ||||| | | || ||    
T  53202632 gtcgcaccaccatccatttgatctacatgatgacgggggcggatttaaaatttgtgtgaggaagaaaggagtacggcggttttacgtttagaaaaaatgg 53202731  T
Q  126 tgtacaacggctatctcttatgtttgtt 153  Q
      ||||||||||||||||||||| ||||    
T  53202732 aatacaacggctatctcttatgtgtgtt 53202759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 23053990 - 23053893
Alignment:
Q  28 cgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg 125  Q
    ||||| |||||||| ||||||||||||||||||| || |||||| ||||||||||||||| |||| |||||||||||||||| ||||| | |||||||    
T  23053990 cgcaccaccatccagttgatctacatgatggcggcggtggatttagaatttgtgtgaggatgaaaagagtacggcggtcctaggtttagaaagaaagg 23053893  T

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Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 47518206 - 47518097
Alignment:
Q  27 tcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaaggt 126  Q
    |||||| |||||||||||||||||||||||| ||| ||  ||||||||||||||||||| |||||||| |||||||||| || |||||| | |||||||     
T  47518206 tcgcaccaccatccatttgatctacatgatgacggcggcagatttggaatttgtgtgagaaagaaaggggtacggcggttct-agtttagaaagaaagga 47518108  T
Q  127 gtacaacggct 137  Q
    |||| ||||||    
T  47518107 gtacgacggct 47518097  T

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Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 10409179 - 10409302
Alignment:
Q  15 cagagacccaagtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttt 114  Q
    |||||||||  ||||||| |||||||||||||||||||||||||||| || |||||| |||||||| ||||||| |||||||| ||||||| ||| ||||    
T  10409179 cagagaccctcgtcgcaccaccatccatttgatctacatgatggcggcggcggatttagaatttgtttgaggaaaaaaggagtgcggcggttctaggttt 10409278  T
Q  115 aaagagaaaggtgtacaacggcta 138  Q
      || |||||| |||| |||||||    
T  10409279 tgagggaaaggagtacgacggcta 10409302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 17281713 - 17281589
Alignment:
Q  15 cagagacccaagtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttt 114  Q
    |||||||||  ||||||| |||||||||||||||||||||||| ||  ||  |||||||||||| || ||||||||||||||||||||||| ||| ||||    
T  17281713 cagagaccctcgtcgcaccaccatccatttgatctacatgatgacgacggcagatttggaatttatgcgaggaagaaaggagtacggcggttctaggttt 17281614  T
Q  115 aaagagaaaggtgtacaacggctat 139  Q
    | | | ||||| |||| ||||||||    
T  17281613 agaaaaaaaggagtacgacggctat 17281589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 1551346 - 1551219
Alignment:
Q  26 gtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg 125  Q
    ||||||| ||||||||||||||||||||||||  |  |   |||||||||||||||||||||||||||||||||  |||| ||| ||||| | |||||||    
T  1551346 gtcgcaccaccatccatttgatctacatgatgatgacgacagatttggaatttgtgtgaggaagaaaggagtacaacggttctaggtttagaaagaaagg 1551247  T
Q  126 tgtacaacggctatctcttatgtttgtt 153  Q
     ||||  |||||||||||||||| ||||    
T  1551246 agtacggcggctatctcttatgtgtgtt 1551219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 4140751 - 4140851
Alignment:
Q  15 cagagacccaagtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttt 114  Q
    |||||||||  || |||| |||||||||||||||||||||||| |   || |||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  4140751 cagagacccttgttgcaccaccatccatttgatctacatgatgacaacggcggatttggaatttgtgtgaggaagaaagaagtacggcggttctaggttt 4140850  T
Q  115 a 115  Q
    |    
T  4140851 a 4140851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 17375639 - 17375738
Alignment:
Q  26 gtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg 125  Q
    ||||||| ||||||||||||||| |||||||||| | |  | |||| |||||||||||||| | ||||||||||||||||||||  |||| |||||||||    
T  17375639 gtcgcaccaccatccatttgatccacatgatggcagcgacgaatttagaatttgtgtgaggcaaaaaggagtacggcggtcctagatttagagagaaagg 17375738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 34660565 - 34660643
Alignment:
Q  34 accatccatttgatctacatgatggcggtgggg---gatttggaatttgtgtgaggaagaaaggagtacggcggtccta 109  Q
    ||||||||||||||||| |||| ||||| |  |   |||||||||||||||||||||||||||||||| ||| ||||||    
T  34660565 accatccatttgatctatatgacggcggcgacgacggatttggaatttgtgtgaggaagaaaggagtagggcagtccta 34660643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 1895757 - 1895811
Alignment:
Q  61 gtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttta 115  Q
    |||| ||||||| ||||||||||||||||||||||||||| |||| ||| |||||    
T  1895757 gtggcggatttgaaatttgtgtgaggaagaaaggagtacgccggttctaggttta 1895811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 4869953 - 4870022
Alignment:
Q  27 tcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagt 97  Q
    |||||| |||||||||||||||||||||| ||| | |  ||||||  ||||||||||||||||||||||||    
T  4869953 tcgcaccaccatccatttgatctacatgacggc-gcgacggatttaaaatttgtgtgaggaagaaaggagt 4870022  T

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Target: chr6 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 20740943 - 20741043
Alignment:
Q  16 agagacccaagtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttta 115  Q
    ||||||||  ||||||| |||||||||||||||||||||||| | |  | ||||||  |||||||||||||||||||||||||| ||||| ||| |||||    
T  20740943 agagaccctcgtcgcaccaccatccatttgatctacatgatgacagcagcggatttaaaatttgtgtgaggaagaaaggagtacagcggttctaggttta 20741042  T
Q  116 a 116  Q
    |    
T  20741043 a 20741043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 21881834 - 21881933
Alignment:
Q  26 gtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg 125  Q
    ||||||| ||||||||||||||||||||||| |||| |   |||||| ||||| || ||||||||||| ||||||| ||||||| ||||| |||||||||    
T  21881834 gtcgcaccaccatccatttgatctacatgattgcggcgacagatttgtaatttatgagaggaagaaagtagtacggtggtcctaggtttagagagaaagg 21881933  T

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Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 18269604 - 18269501
Alignment:
Q  27 tcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaaggt 126  Q
    |||||| ||||| |||||||||||||||||||||  |  ||||||||||||||||||||| ||||||||||| | | |||||| |||||  ||||||||     
T  18269604 tcgcaccaccattcatttgatctacatgatggcgacgacggatttggaatttgtgtgagggagaaaggagtaggacagtcctaggtttattgagaaagga 18269505  T
Q  127 gtac 130  Q
    ||||    
T  18269504 gtac 18269501  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 3302958 - 3303057
Alignment:
Q  40 catttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaaggtgtacaacggctat 139  Q
    |||||||||||||||||||||| |  | ||||  |||||||||||| ||||||| |||||| |||| |||  |||| ||||||||| |||||||| ||||    
T  3302958 catttgatctacatgatggcggcgacgaatttaaaatttgtgtgagaaagaaagaagtacgacggttctagatttagagagaaaggagtacaacgactat 3303057  T

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