View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4411_low_39 (Length: 235)

Name: NF4411_low_39
Description: NF4411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4411_low_39
NF4411_low_39
[»] chr1 (39 HSPs)
chr1 (17-235)||(31015064-31015282)
chr1 (25-115)||(31193381-31193471)
chr1 (143-208)||(32461393-32461458)
chr1 (142-235)||(51410046-51410145)
chr1 (142-208)||(37598885-37598951)
chr1 (143-208)||(47989562-47989627)
chr1 (143-235)||(18337350-18337448)
chr1 (142-208)||(25934681-25934747)
chr1 (142-235)||(18471321-18471415)
chr1 (144-235)||(40258874-40258971)
chr1 (166-235)||(1815278-1815353)
chr1 (144-204)||(10577676-10577736)
chr1 (145-208)||(1486646-1486709)
chr1 (143-235)||(22515827-22515925)
chr1 (142-208)||(9828109-9828175)
chr1 (142-208)||(40917814-40917880)
chr1 (202-235)||(24577191-24577224)
chr1 (143-208)||(41597410-41597475)
chr1 (145-235)||(42359391-42359487)
chr1 (202-235)||(47989518-47989551)
chr1 (142-206)||(6427531-6427595)
chr1 (144-208)||(21032271-21032335)
chr1 (159-235)||(18190064-18190146)
chr1 (143-235)||(38078601-38078699)
chr1 (143-235)||(46348323-46348421)
chr1 (205-235)||(113320-113350)
chr1 (142-192)||(15765828-15765878)
chr1 (143-209)||(36906061-36906126)
chr1 (202-235)||(1704997-1705030)
chr1 (202-235)||(5944304-5944337)
chr1 (202-235)||(6332691-6332724)
chr1 (202-235)||(6612176-6612209)
chr1 (143-208)||(18556385-18556450)
chr1 (202-235)||(21378599-21378632)
chr1 (202-235)||(22881621-22881654)
chr1 (202-235)||(28273093-28273126)
chr1 (202-235)||(31694715-31694748)
chr1 (198-235)||(48450588-48450625)
chr1 (202-230)||(19058861-19058889)
[»] chr5 (33 HSPs)
chr5 (143-235)||(21576685-21576783)
chr5 (144-209)||(6401562-6401627)
chr5 (145-235)||(21190998-21191094)
chr5 (143-208)||(31084382-31084447)
chr5 (145-205)||(23015926-23015986)
chr5 (146-208)||(39268541-39268603)
chr5 (147-233)||(4105282-4105374)
chr5 (202-235)||(6247643-6247676)
chr5 (202-235)||(7218272-7218305)
chr5 (202-235)||(15884009-15884042)
chr5 (143-208)||(21522815-21522880)
chr5 (143-208)||(21533381-21533446)
chr5 (143-208)||(21814326-21814391)
chr5 (159-208)||(30098994-30099043)
chr5 (142-207)||(40131687-40131752)
chr5 (199-235)||(14674290-14674326)
chr5 (160-208)||(21542095-21542143)
chr5 (160-208)||(30502345-30502393)
chr5 (160-208)||(30542688-30542736)
chr5 (142-235)||(43564902-43565001)
chr5 (204-235)||(39698562-39698593)
chr5 (145-208)||(43001859-43001922)
chr5 (146-208)||(18592138-18592200)
chr5 (202-232)||(21351910-21351940)
chr5 (143-209)||(30098390-30098456)
chr5 (202-235)||(13287404-13287437)
chr5 (142-207)||(14873577-14873642)
chr5 (202-235)||(24906306-24906339)
chr5 (202-235)||(33178046-33178079)
chr5 (143-208)||(39698606-39698671)
chr5 (202-235)||(42893381-42893414)
chr5 (202-230)||(21542056-21542084)
chr5 (143-195)||(35017110-35017162)
[»] chr6 (34 HSPs)
chr6 (143-235)||(34595155-34595253)
chr6 (142-208)||(17327589-17327655)
chr6 (142-205)||(8365447-8365510)
chr6 (143-235)||(28152119-28152217)
chr6 (144-235)||(17841530-17841627)
chr6 (144-235)||(31959180-31959268)
chr6 (142-208)||(10339053-10339119)
chr6 (142-208)||(18367901-18367967)
chr6 (144-209)||(31384983-31385048)
chr6 (146-235)||(7996325-7996416)
chr6 (146-235)||(8022385-8022476)
chr6 (146-231)||(32978842-32978933)
chr6 (144-235)||(9658900-9658998)
chr6 (145-208)||(12696383-12696446)
chr6 (202-235)||(9522912-9522945)
chr6 (202-235)||(9911533-9911566)
chr6 (202-235)||(10770679-10770712)
chr6 (143-208)||(16488519-16488584)
chr6 (202-235)||(16766718-16766751)
chr6 (143-207)||(13789209-13789273)
chr6 (143-207)||(13797828-13797892)
chr6 (142-235)||(28715316-28715415)
chr6 (204-235)||(31384941-31384972)
chr6 (143-198)||(34446635-34446690)
chr6 (142-208)||(4877997-4878062)
chr6 (202-235)||(7801161-7801194)
chr6 (202-235)||(7977835-7977868)
chr6 (202-235)||(9107375-9107408)
chr6 (142-179)||(10649371-10649408)
chr6 (143-208)||(16766762-16766827)
chr6 (202-235)||(16833329-16833362)
chr6 (203-235)||(1681779-1681811)
chr6 (142-202)||(8776907-8776967)
chr6 (199-235)||(17341666-17341702)
[»] scaffold0361 (1 HSPs)
scaffold0361 (143-235)||(14551-14646)
[»] chr3 (37 HSPs)
chr3 (145-235)||(28918022-28918120)
chr3 (143-235)||(20503486-20503584)
chr3 (143-235)||(10954973-10955074)
chr3 (143-235)||(55401096-55401194)
chr3 (142-205)||(41961578-41961641)
chr3 (143-208)||(13845465-13845530)
chr3 (166-230)||(35312080-35312144)
chr3 (142-235)||(40993274-40993373)
chr3 (159-235)||(7171522-7171604)
chr3 (142-208)||(14209178-14209244)
chr3 (144-209)||(14216956-14217021)
chr3 (144-209)||(14223085-14223150)
chr3 (144-208)||(15864886-15864950)
chr3 (144-201)||(15999951-16000008)
chr3 (202-235)||(26508131-26508164)
chr3 (143-208)||(27505305-27505370)
chr3 (143-208)||(35222992-35223057)
chr3 (202-234)||(25775531-25775563)
chr3 (143-207)||(34185052-34185116)
chr3 (203-235)||(35994744-35994776)
chr3 (145-208)||(4987222-4987285)
chr3 (147-202)||(11666015-11666070)
chr3 (204-235)||(14209134-14209165)
chr3 (162-208)||(2941612-2941658)
chr3 (205-235)||(4987299-4987329)
chr3 (202-235)||(1509560-1509593)
chr3 (202-235)||(4990972-4991005)
chr3 (202-235)||(8587026-8587059)
chr3 (202-235)||(8593158-8593191)
chr3 (143-208)||(8842383-8842448)
chr3 (202-235)||(21256991-21257024)
chr3 (202-235)||(27505267-27505300)
chr3 (202-235)||(28812536-28812569)
chr3 (202-235)||(34185128-34185161)
chr3 (202-235)||(34910338-34910371)
chr3 (202-235)||(49651791-49651824)
chr3 (202-235)||(51206358-51206391)
[»] chr4 (35 HSPs)
chr4 (143-235)||(23292926-23293024)
chr4 (143-235)||(28964188-28964286)
chr4 (143-209)||(5414101-5414167)
chr4 (143-235)||(42640550-42640643)
chr4 (142-235)||(2625958-2626053)
chr4 (143-235)||(715545-715645)
chr4 (143-235)||(752871-752971)
chr4 (144-208)||(30982808-30982872)
chr4 (142-208)||(19500786-19500852)
chr4 (142-208)||(24613629-24613695)
chr4 (53-115)||(49190144-49190206)
chr4 (202-235)||(12797343-12797376)
chr4 (143-208)||(12895214-12895279)
chr4 (142-203)||(19482738-19482799)
chr4 (202-235)||(29205465-29205498)
chr4 (144-208)||(3947702-3947766)
chr4 (142-235)||(16073415-16073514)
chr4 (143-203)||(29205527-29205587)
chr4 (146-197)||(28084589-28084640)
chr4 (159-235)||(49431047-49431129)
chr4 (205-235)||(11596360-11596390)
chr4 (143-209)||(36635383-36635449)
chr4 (205-235)||(40481657-40481687)
chr4 (193-235)||(40613471-40613513)
chr4 (202-235)||(6485616-6485649)
chr4 (202-235)||(6879470-6879503)
chr4 (143-204)||(18966567-18966628)
chr4 (202-235)||(21945524-21945557)
chr4 (20-109)||(24232028-24232117)
chr4 (202-235)||(30298968-30299001)
chr4 (202-235)||(30327836-30327869)
chr4 (202-235)||(54580028-54580061)
chr4 (144-208)||(848016-848080)
chr4 (144-208)||(14465006-14465070)
chr4 (202-234)||(28000747-28000779)
[»] chr8 (30 HSPs)
chr8 (145-235)||(3025572-3025668)
chr8 (143-208)||(34450961-34451026)
chr8 (143-208)||(3951476-3951541)
chr8 (142-235)||(18407740-18407839)
chr8 (144-208)||(29447040-29447104)
chr8 (146-235)||(40332212-40332307)
chr8 (144-208)||(43737752-43737816)
chr8 (143-235)||(36450694-36450792)
chr8 (142-235)||(8342993-8343087)
chr8 (143-209)||(26902104-26902170)
chr8 (142-208)||(29510232-29510298)
chr8 (202-235)||(4948673-4948706)
chr8 (143-208)||(22652041-22652106)
chr8 (202-235)||(25566862-25566895)
chr8 (161-235)||(31557017-31557097)
chr8 (142-213)||(8343376-8343447)
chr8 (142-208)||(5813646-5813712)
chr8 (170-208)||(26915202-26915240)
chr8 (202-235)||(2572061-2572094)
chr8 (143-208)||(15816058-15816123)
chr8 (143-208)||(16641909-16641974)
chr8 (202-235)||(20873090-20873123)
chr8 (202-235)||(24613541-24613574)
chr8 (202-235)||(24669454-24669487)
chr8 (204-233)||(30077394-30077423)
chr8 (143-208)||(33405324-33405389)
chr8 (143-207)||(6065586-6065650)
chr8 (144-180)||(13009423-13009459)
chr8 (159-203)||(22943305-22943349)
chr8 (203-235)||(41831946-41831978)
[»] chr2 (30 HSPs)
chr2 (145-235)||(2438661-2438757)
chr2 (143-208)||(24009349-24009414)
chr2 (143-205)||(26769579-26769641)
chr2 (143-207)||(30717459-30717523)
chr2 (159-208)||(12224277-12224326)
chr2 (143-199)||(12668352-12668408)
chr2 (150-229)||(21624294-21624374)
chr2 (144-208)||(28596523-28596587)
chr2 (143-207)||(36096304-36096368)
chr2 (143-235)||(18840953-18841051)
chr2 (142-209)||(34993921-34993988)
chr2 (143-235)||(38117099-38117197)
chr2 (142-208)||(37419808-37419874)
chr2 (143-209)||(42511322-42511388)
chr2 (143-208)||(11223793-11223857)
chr2 (202-235)||(19536402-19536435)
chr2 (202-235)||(30404855-30404888)
chr2 (203-235)||(30717536-30717568)
chr2 (159-235)||(5040755-5040837)
chr2 (202-233)||(18421986-18422017)
chr2 (145-208)||(19942319-19942382)
chr2 (204-235)||(33153445-33153476)
chr2 (143-235)||(37558998-37559096)
chr2 (202-235)||(11223868-11223901)
chr2 (202-235)||(15657885-15657918)
chr2 (202-235)||(23058447-23058480)
chr2 (143-208)||(35056933-35056998)
chr2 (183-235)||(35449534-35449586)
chr2 (202-234)||(44635520-44635552)
chr2 (144-208)||(44860385-44860449)
[»] chr7 (26 HSPs)
chr7 (142-208)||(5409770-5409836)
chr7 (142-208)||(9778559-9778625)
chr7 (143-235)||(25481923-25482021)
chr7 (143-205)||(25822723-25822785)
chr7 (143-235)||(21880173-21880271)
chr7 (143-201)||(29763129-29763187)
chr7 (143-208)||(598262-598327)
chr7 (202-235)||(18039020-18039053)
chr7 (202-235)||(21560524-21560557)
chr7 (202-235)||(24339663-24339696)
chr7 (143-208)||(24339707-24339772)
chr7 (202-235)||(26033466-26033499)
chr7 (143-208)||(43027404-43027469)
chr7 (142-235)||(15680830-15680929)
chr7 (143-235)||(21864829-21864927)
chr7 (143-235)||(32093954-32094058)
chr7 (202-235)||(2334271-2334304)
chr7 (202-235)||(3991345-3991378)
chr7 (202-235)||(5409841-5409874)
chr7 (202-235)||(7438727-7438760)
chr7 (202-235)||(9408339-9408372)
chr7 (206-235)||(13557750-13557779)
chr7 (202-235)||(27945062-27945095)
chr7 (203-235)||(13770712-13770744)
chr7 (144-208)||(20549845-20549909)
chr7 (144-208)||(32287404-32287468)
[»] scaffold0793 (1 HSPs)
scaffold0793 (143-235)||(4821-4921)
[»] scaffold0380 (1 HSPs)
scaffold0380 (142-201)||(8662-8721)
[»] scaffold0306 (1 HSPs)
scaffold0306 (145-208)||(13460-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (145-208)||(21804-21867)
[»] scaffold0652 (1 HSPs)
scaffold0652 (144-235)||(403-500)
[»] scaffold0512 (1 HSPs)
scaffold0512 (143-208)||(4976-5041)
[»] scaffold0003 (1 HSPs)
scaffold0003 (143-208)||(241659-241724)
[»] scaffold0475 (1 HSPs)
scaffold0475 (142-209)||(3361-3428)
[»] scaffold0136 (2 HSPs)
scaffold0136 (142-208)||(3777-3843)
scaffold0136 (204-235)||(3856-3887)
[»] scaffold0083 (1 HSPs)
scaffold0083 (163-230)||(45490-45563)
[»] scaffold0053 (1 HSPs)
scaffold0053 (143-208)||(8852-8917)
[»] scaffold0025 (1 HSPs)
scaffold0025 (202-235)||(23791-23824)
[»] scaffold0021 (1 HSPs)
scaffold0021 (202-235)||(130503-130536)
[»] scaffold0623 (1 HSPs)
scaffold0623 (144-208)||(5926-5990)
[»] scaffold0004 (2 HSPs)
scaffold0004 (144-208)||(92876-92940)
scaffold0004 (202-234)||(123650-123682)
[»] scaffold0223 (1 HSPs)
scaffold0223 (204-235)||(20193-20224)
[»] scaffold0036 (1 HSPs)
scaffold0036 (145-208)||(9678-9741)
[»] scaffold0450 (1 HSPs)
scaffold0450 (143-205)||(8564-8626)
[»] scaffold0246 (1 HSPs)
scaffold0246 (205-235)||(19596-19626)
[»] scaffold0103 (1 HSPs)
scaffold0103 (205-235)||(51832-51862)
[»] scaffold0019 (1 HSPs)
scaffold0019 (142-208)||(71790-71856)
[»] scaffold0171 (1 HSPs)
scaffold0171 (202-235)||(23441-23474)
[»] scaffold0044 (1 HSPs)
scaffold0044 (202-235)||(53201-53234)
[»] scaffold0027 (1 HSPs)
scaffold0027 (202-235)||(46703-46736)
[»] scaffold0011 (1 HSPs)
scaffold0011 (202-235)||(17754-17787)
[»] scaffold0168 (1 HSPs)
scaffold0168 (142-178)||(21243-21279)


Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 17 - 235
Target Start/End: Complemental strand, 31015282 - 31015064
Alignment:
Q  17 agacagtactcaccatacaagtcgattttgtatgggttgagtttggctgaactcaaattctaatgtggtagcagagcctatccaatatccattggaccaa 116  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31015282 agacagtactcaccatacaagtcgattttgtatgggttgattttggctgaactcaaattctaatgtggtagcagagcctatccaatatccattggaccaa 31015183  T
Q  117 ctgaaaatatgtttataggtgggggcctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacacttgtaatt 216  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31015182 ctgaaaatatgtttataggtgggggcctatgaagcactgatcctccttggattaggcgtgtcccgatgtcagacacgtgtcgtgtccgacacttgtaatt 31015083  T
Q  217 acactgaattatgtgattt 235  Q
    |||||||||||||||||||    
T  31015082 acactgaattatgtgattt 31015064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 31193471 - 31193381
Alignment:
Q  25 ctcaccatacaagtcgattttgtatgggttgagtttggctgaactcaaattctaatgtggtagcagagcctatccaatatccattggacca 115  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||| || ||| |||||||||    
T  31193471 ctcaccatacaagtcaattttgtatgggttgagtttggccgaactcaaattctaatatggtagcagagcttatctaagatcaattggacca 31193381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 32461393 - 32461458
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  || |||||||||||||||||||| ||||||||||||||||||||||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacac 32461458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 51410145 - 51410046
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccg------acacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||| || |||||||||||||||||||| |  |||| || ||||||||||||||      |||||||||||||||||||||||||||||||    
T  51410145 cctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 51410046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 37598951 - 37598885
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  ||||| ||||||||||||||||| |||| |||||||||||||||||||||    
T  37598951 cctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacac 37598885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 47989627 - 47989562
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  ||||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacac 47989562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 18337448 - 18337350
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac------ttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  ||||| |||| |||| ||||||| |||| ||||||||| |||||||||||      |||||||||||||||||||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattt 18337350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 25934747 - 25934681
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  |||||||||| |||||| ||||  ||||||||||||||||||||||||||    
T  25934747 cctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacac 25934681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 18471415 - 18471321
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt-ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||| |||||  ||||| | |||||| ||||  |  |||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  18471415 cctatgaagtacggacactcctcgaattaggtgtgtttcggtgtcggacacgtgtcgtgtaccgacacttgtaattatactgaattatgtgattt 18471321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 40258874 - 40258971
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtc------cgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||| |||  ||||| |||||||||||||||   |||| |||| ||||||||||      |||||||||||||||||||||||||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattt 40258971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 1815353 - 1815278
Alignment:
Q  166 gattaggcgtgtcccaatgtcagacacgtgtcgtgtc------cgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||  |||| |||| ||||||||||      |||||||||||||||||||||||||||||||||    
T  1815353 gattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattt 1815278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 10577676 - 10577736
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccg 204  Q
    |||||||||||||  |||||||||| |||||||||||  ||||||||||| ||||||||||    
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccg 10577736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 1486646 - 1486709
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||| ||  ||||| ||||||||||||||||  |||| |||||||||||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 22515827 - 22515925
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt------ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  ||||| |||||||||||||| |  |||| || | |||||||||      |||||||||||||||||||| |||||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattt 22515925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 9828175 - 9828109
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  ||||| ||||||| ||||||||  |||| ||||||||||||||| |||||    
T  9828175 cctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacac 9828109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 40917880 - 40917814
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||   |||| ||||||||||||||||  |||| |||||||||||||||| ||||    
T  40917880 cctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacac 40917814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 24577191 - 24577224
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  24577191 ccgacacttgtaattacactgaattatgtgattt 24577224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 41597410 - 41597475
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||| ||  |||||||||| | |||| ||||  ||||||||||||||||||||||||||    
T  41597410 ctatgaagcacagacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgacac 41597475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 42359391 - 42359487
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccga------cacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||  ||||| ||||||||||||||||  |||| |||||  ||| |||||||      ||||||||||||||||||||| ||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgattt 42359487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 47989551 - 47989518
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  47989551 ccgacacttgtaattacactgaattatgtgattt 47989518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 6427595 - 6427531
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgac 206  Q
    |||||||||||||||  ||| |  |||||||||||||||  |||| |||||||||||||||||||    
T  6427595 cctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgac 6427531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 21032335 - 21032271
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||| ||  ||||||||||||||||| || | ||||| ||||| |||||||||||||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacacatgtcgtgtccgacac 21032271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 18190064 - 18190146
Alignment:
Q  159 ctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtc------cgacacttgtaattacactgaattatgtgattt 235  Q
    ||||| |||||||| |||||||  |||| ||||||||| |||||      |||||||||||||||||||||||||||| ||||    
T  18190064 ctcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattt 18190146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 38078601 - 38078699
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccga------cacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||| || ||||| |||||||||||||||   |||   ||| |||||||||||||      |||||||||||||| |||||||||||||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattt 38078699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 46348323 - 46348421
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt------ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  | ||| |||| ||||||||| |  |||| ||||||||||||||      |||||||||||||||||||| |||||| ||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattt 46348421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 235
Target Start/End: Complemental strand, 113350 - 113320
Alignment:
Q  205 acacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||||||||||||||    
T  113350 acacttgtaattacactgaattatgtgattt 113320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 15765878 - 15765828
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacac 192  Q
    |||||||||||||||  ||| | ||||||||||||||||| ||||||||||    
T  15765878 cctatgaagcacggacactcttcggattaggcgtgtcccagtgtcagacac 15765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 36906126 - 36906061
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact 209  Q
    ||||||||||||||  ||| ||| |||||| |||||||| |||||||| || |||||||||||||||    
T  36906126 ctatgaagcacggacactc-ttgcattaggtgtgtcccagtgtcagacgcgggtcgtgtccgacact 36906061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 1704997 - 1705030
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||| ||||||||||||||||    
T  1704997 ccgacacttgtaattaccctgaattatgtgattt 1705030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 5944337 - 5944304
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||| ||||||||||||||||||||||||    
T  5944337 ccgacacttataattacactgaattatgtgattt 5944304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 6332724 - 6332691
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||| |||||||||||||||||||||||||||||    
T  6332724 ccgatacttgtaattacactgaattatgtgattt 6332691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 6612176 - 6612209
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||| ||||    
T  6612176 ccgacacttgtaattacactgaattatgtaattt 6612209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 18556385 - 18556450
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  || || ||||||||||||||||| |||| || |||||||| ||| |||||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacac 18556450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 21378632 - 21378599
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||| ||||    
T  21378632 ccgacacttgtaattacactgaattatgtaattt 21378599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 22881621 - 22881654
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  22881621 ccgacacttgtaattacactaaattatgtgattt 22881654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 28273093 - 28273126
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||| ||||||    
T  28273093 ccgacacttgtaattacactgaattatatgattt 28273126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 31694715 - 31694748
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||| |||||||||||||||||    
T  31694715 ccgacacttgtaattatactgaattatgtgattt 31694748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 48450588 - 48450625
Alignment:
Q  198 gtgtccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  48450588 gtgtccgacacttgtaattacactaaattatgttattt 48450625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 230
Target Start/End: Original strand, 19058861 - 19058889
Alignment:
Q  202 ccgacacttgtaattacactgaattatgt 230  Q
    |||||||||||||||||||||||||||||    
T  19058861 ccgacacttgtaattacactgaattatgt 19058889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 21576685 - 21576783
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtc------cgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||||      |||||||||||||||||||||||||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattt 21576783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 6401627 - 6401562
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact 209  Q
    |||||||||||||  |||||||||| |||||| ||||  |||||||||||||||||||||||||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacact 6401562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 21190998 - 21191094
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccga------cacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||  ||||| ||||||||||||||||   ||| ||||||||| ||||||||      ||||||||||||||||||||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattt 21191094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 31084447 - 31084382
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||| ||||||  ||||| ||||||||| ||||||| |||| |||||||||||||||||||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacac 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 23015926 - 23015986
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccga 205  Q
    ||||||| ||||  ||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccga 23015986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 39268541 - 39268603
Alignment:
Q  146 tgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||  ||||| ||||||||||||||||| |||| ||||| |||||||||| ||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacac 39268603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 4105374 - 4105282
Alignment:
Q  147 gaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccga------cacttgtaattacactgaattatgtgat 233  Q
    ||||||||||  ||||| ||||||||||||||||| | |||||||| | ||| ||| ||      ||||||||||||||||||||||||||||    
T  4105374 gaagcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgat 4105282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 6247676 - 6247643
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  6247676 ccgacacttgtaattacactgaattatgtgattt 6247643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 7218272 - 7218305
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  7218272 ccgacacttgtaattacactgaattatgtgattt 7218305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 15884042 - 15884009
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  15884042 ccgacacttgtaattacactgaattatgtgattt 15884009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 21522880 - 21522815
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||| |||||||  ||| ||||||||||||||||||  || | |||||||||||||||||||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacac 21522815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 21533446 - 21533381
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||| |||||||  ||| ||||||||||||||||||  || | |||||||||||||||||||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacac 21533381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 21814391 - 21814326
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||| |   ||||||||| |||||||||||  || |||||||||||||||||||||||    
T  21814391 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacac 21814326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 30098994 - 30099043
Alignment:
Q  159 ctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||| |||||||||||  ||||||||||||||||| ||||||||    
T  30098994 ctccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacac 30099043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 40131752 - 40131687
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgaca 207  Q
    |||||||| ||||||  ||||||||| ||| ||||||||||||||||||||  |||||||| ||||    
T  40131752 cctatgaaacacggacactccttggagtagacgtgtcccaatgtcagacacaagtcgtgtctgaca 40131687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 14674326 - 14674290
Alignment:
Q  199 tgtccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||| |||||||||||||    
T  14674326 tgtccgacacttgtaattacactaaattatgtgattt 14674290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 21542143 - 21542095
Alignment:
Q  160 tccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||| ||||||||||  |||| |||||||||||||||||||||    
T  21542143 tccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 21542095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 30502345 - 30502393
Alignment:
Q  160 tccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||| ||||||| |||| |||| ||||||||||||||||    
T  30502345 tccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacac 30502393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 30542688 - 30542736
Alignment:
Q  160 tccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||| ||||||| |||| |||| ||||||||||||||||    
T  30542688 tccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacac 30542736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 43565001 - 43564902
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccg------acacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||  || || ||||||||||||||||   ||| ||||| |||||||||||      |||||| |||||||||| |||||||||||||    
T  43565001 cctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgattt 43564902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 235
Target Start/End: Complemental strand, 39698593 - 39698562
Alignment:
Q  204 gacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||    
T  39698593 gacacttgtaattacactgaattatgtgattt 39698562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 43001922 - 43001859
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||  ||||| |||||||||||||||   |||  |||||||||||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacac 43001859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 18592200 - 18592138
Alignment:
Q  146 tgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||  ||| | | ||||| |||||||| ||||||||||||||| |||||||||||    
T  18592200 tgaagcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacac 18592138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 232
Target Start/End: Original strand, 21351910 - 21351940
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtga 232  Q
    |||||||||||||||||||||||||||||||    
T  21351910 ccgacacttgtaattacactgaattatgtga 21351940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 30098456 - 30098390
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact 209  Q
    ||||||||||||||   |||| |||||||| ||||||   |||| ||||||||||||||||||||||    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacact 30098390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 13287404 - 13287437
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||| |||||||||||||||||||||    
T  13287404 ccgacacttgtagttacactgaattatgtgattt 13287437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 14873642 - 14873577
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgaca 207  Q
    |||||||||||||||  ||||| ||||||||||||||||  |||  ||||||||| | ||||||||    
T  14873642 cctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgaca 14873577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 24906306 - 24906339
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||| ||||    
T  24906306 ccgacacttgtaattacactgaattatgtcattt 24906339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 33178079 - 33178046
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  33178079 ccgacacttgtaattacactaaattatgtgattt 33178046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 39698671 - 39698606
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  ||||| |||||||||||||| |  |||| || || |||||||||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacac 39698606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 42893414 - 42893381
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||| ||||||||||||    
T  42893414 ccgacacttgtaattacactggattatgtgattt 42893381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 230
Target Start/End: Complemental strand, 21542084 - 21542056
Alignment:
Q  202 ccgacacttgtaattacactgaattatgt 230  Q
    |||||||||||||||||||||||||||||    
T  21542084 ccgacacttgtaattacactgaattatgt 21542056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 35017162 - 35017110
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtg 195  Q
    ||||||||||||||  ||||| |||||||||||||||| ||||  ||||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtcccgatgttggacacgtg 35017110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 34595253 - 34595155
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccg------acacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  ||||| |||||||| |||||||  ||||||||||||||||||||||      |||||||||||||||||||||||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 34595155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 17327589 - 17327655
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  ||||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  17327589 cctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 8365447 - 8365510
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccga 205  Q
    |||||||||||||||  ||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  8365447 cctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 8365510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 28152217 - 28152119
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac------ttgtaattacactgaattatgtgattt 235  Q
    |||||||||||| |  ||||| ||||||||| ||||||  |||| |||||||||||||||||||||      |||||||||||||||||||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 28152119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 17841530 - 17841627
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccga------cacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||  ||||| |||||||||||||| || |||| ||||| ||||||||||||      |||||||||||||||| |||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattt 17841627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 31959268 - 31959180
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||  ||||| |||||||| |||||||  |||| ||||| |||||   ||||||||||||||||||||| ||||||||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcg---ccgacacttgtaattacactgcattatgtgattt 31959180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 10339053 - 10339119
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  |||||  |||||||||||||||| |||| |||| ||||||||||||||||    
T  10339053 cctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacac 10339119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 18367967 - 18367901
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  |||||||||| |||||||||||  ||||||||| |||||||||| |||||    
T  18367967 cctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacac 18367901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 31385048 - 31384983
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact 209  Q
    |||||||||||||  ||||||||||||||||||||||  |||  |||||||||||||||| |||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacact 31384983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 7996325 - 7996416
Alignment:
Q  146 tgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtg--tccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||  ||||||||||||||||||||||  ||| |||||||||||| |   ||||| | | ||||||||||||||||| ||||||    
T  7996325 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcgcgacaccgacgcatataattacactgaattatatgattt 7996416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 8022476 - 8022385
Alignment:
Q  146 tgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtg--tccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||  ||||||||||||||||||||||  ||| |||||||||||| |   ||||| | | ||||||||||||||||| ||||||    
T  8022476 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcgcgacaccgacgcatataattacactgaattatatgattt 8022385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 32978842 - 32978933
Alignment:
Q  146 tgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt------ccgacacttgtaattacactgaattatgtg 231  Q
    |||||||||||  ||||||||||||| ||||||||  |||| |||| |||||||||      |||||||||||||||||||| |||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtg 32978933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 9658998 - 9658900
Alignment:
Q  144 tatgaagcacggatcctccttgga-ttaggcgtgtcccaatgtcagacacgtgtcgtgt------ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||  ||||||||| |||||||||| ||  |||||||||||||||||||      ||||||  | ||||||||||||||||||||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattt 9658900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 12696446 - 12696383
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||| ||  |||||||||| ||| |||||||  ||||||||||||||||||||||||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacac 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 9522945 - 9522912
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  9522945 ccgacacttgtaattacactgaattatgtgattt 9522912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 9911533 - 9911566
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  9911533 ccgacacttgtaattacactgaattatgtgattt 9911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 10770679 - 10770712
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  10770679 ccgacacttgtaattacactgaattatgtgattt 10770712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 16488519 - 16488584
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||| |   ||||||||| |||||||||||  || |||||||||||||||||||||||    
T  16488519 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacac 16488584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 16766751 - 16766718
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  16766751 ccgacacttgtaattacactgaattatgtgattt 16766718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 13789273 - 13789209
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgaca 207  Q
    |||||||||||| |  ||||||| || |||||| |||| |||||||||||||||| |||||||||    
T  13789273 ctatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgaca 13789209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 13797892 - 13797828
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgaca 207  Q
    |||||||||||| |  ||||||| || |||||| |||| |||||||||||||||| |||||||||    
T  13797892 ctatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgaca 13797828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 28715415 - 28715316
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac------ttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||| |  || || | ||||||||||||||  ||||  ||||||||||||||||||||      |||||||||||||||||||||| ||||    
T  28715415 cctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattt 28715316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 235
Target Start/End: Complemental strand, 31384972 - 31384941
Alignment:
Q  204 gacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||    
T  31384972 gacacttgtaattacactgaattatgtgattt 31384941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 198
Target Start/End: Complemental strand, 34446690 - 34446635
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcg 198  Q
    ||||||||||||||  |||||||||||||| |||||||| ||||||| ||| ||||    
T  34446690 ctatgaagcacggacactccttggattaggtgtgtcccagtgtcagatacgcgtcg 34446635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 4878062 - 4877997
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  ||||| ||||||||||||| ||  |||| |||| ||||||||||||||||    
T  4878062 cctatgaagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacac 4877997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 7801161 - 7801194
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||| ||||||||||||||||    
T  7801161 ccgacacttgtaattacgctgaattatgtgattt 7801194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 7977835 - 7977868
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||| ||||    
T  7977835 ccgacacttgtaattacactgaattatgtaattt 7977868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 9107375 - 9107408
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||| ||||||||    
T  9107375 ccgacacttgtaattacactgaattttgtgattt 9107408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 10649408 - 10649371
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcc 179  Q
    |||||||||||||||  |||||||||||||||||||||    
T  10649408 cctatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 16766827 - 16766762
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||   || | ||||||||||||||||  |||| ||||||||| |||||||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 16766762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 16833362 - 16833329
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||| ||||||||||    
T  16833362 ccgacacttgtaattacactgaagtatgtgattt 16833329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 1681811 - 1681779
Alignment:
Q  203 cgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||| |||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattt 1681779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 8776907 - 8776967
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtc 202  Q
    |||||||||||||||  ||||| |||||||| ||||| |  |||| |||||||||||||||    
T  8776907 cctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 17341666 - 17341702
Alignment:
Q  199 tgtccgacacttgtaattacactgaattatgtgattt 235  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  17341666 tgtctgacacttataattacactgaattatgtgattt 17341702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 14646 - 14551
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccga---cacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||| |  |||||| ||||||||||||| |  |||| ||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccacttgtaattacactgaattatgtgattt 14551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 28918120 - 28918022
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt--------ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||| |||  ||||||||||||||||||||||| |||| ||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattt 28918022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 20503584 - 20503486
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt------ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  ||||| ||||||||||||||||  ||||||||| |||||||||      ||||||||||||||||||||||||||||| ||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattt 20503486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 10955074 - 10954973
Alignment:
Q  143 ctatgaagcacgga---tcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccg------acacttgtaattacactgaattatgtgat 233  Q
    ||||||||||||||   | ||||| ||||||||||||||||| |||| |||||||||||||||||      |||||||| ||||||||||||||||||||    
T  10955074 ctatgaagcacggacactactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgat 10954975  T
Q  234 tt 235  Q
    ||    
T  10954974 tt 10954973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 55401194 - 55401096
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccg------acacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  ||||| |||||||||||||| |  |||| |||||||||||||||||      ||||||||||||||||| |||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattt 55401096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 41961578 - 41961641
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccga 205  Q
    |||||||||||||||  || || ||||||||||||||||| |||| ||||||||||||||||||    
T  41961578 cctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 41961641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 13845465 - 13845530
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  |||||||||| ||||||||| |  |||||||||||| |||||||||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacac 13845530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 35312144 - 35312080
Alignment:
Q  166 gattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacacttgtaattacactgaattatgt 230  Q
    ||||||| ||||| || |||||||||  |||| | ||||||||||||||||||||||||||||||    
T  35312144 gattaggtgtgtctcagtgtcagacatatgtcttatccgacacttgtaattacactgaattatgt 35312080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 40993274 - 40993373
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt------ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||| |||  ||||| ||||||||||||||||  |||| |||| |||||||||      ||||||| | ||||||||||||||||||||||||    
T  40993274 cctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattt 40993373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 7171604 - 7171522
Alignment:
Q  159 ctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccg------acacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |  |||| |||||||||||||||||      |||||||||||||||| ||||||| ||||||    
T  7171604 ctccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgattt 7171522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 14209244 - 14209178
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  || ||||||||||| || |||| |||||  ||||||||||||||||||||    
T  14209244 cctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacac 14209178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 14217021 - 14216956
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact 209  Q
    |||||||||||||  || || |||||||| |||||||| ||||  |||||||||||||||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacact 14216956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 14223150 - 14223085
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact 209  Q
    |||||||||||||  || || |||||||| |||||||| ||||  |||||||||||||||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacact 14223085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 15864950 - 15864886
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtc-gtgtccgacac 208  Q
    |||||||||||||  ||| ||||||||||||||||||  ||||||||||||||| |||||||||||    
T  15864950 tatgaagcacggacactctttggattaggcgtgtccc-gtgtcagacacgtgtcggtgtccgacac 15864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 15999951 - 16000008
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt 201  Q
    ||||| |||||||  ||||||||||||||||||||||  |||| ||||||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 26508164 - 26508131
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  26508164 ccgacacttgtaattacactgaattatgtgattt 26508131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 27505370 - 27505305
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  ||||| ||||||||| ||||||  |||| ||||||||||||||| |||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 35223057 - 35222992
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  ||||| |||| | |||||||||  ||||||||||||||| ||||||||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacac 35222992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 25775563 - 25775531
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgatt 234  Q
    |||||||||||||||||||||||||||||||||    
T  25775563 ccgacacttgtaattacactgaattatgtgatt 25775531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 34185052 - 34185116
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgaca 207  Q
    ||||||||||||||  ||||| ||||||||||||||||  |||| ||||| |||| |||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgaca 34185116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 35994744 - 35994776
Alignment:
Q  203 cgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||||||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtgattt 35994776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 4987222 - 4987285
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||| |||||  ||||| ||||||||||||||||  |||| |||||||||||||||| ||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacac 4987285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 11666070 - 11666015
Alignment:
Q  147 gaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtc 202  Q
    ||||||||||  ||||||| ||||||||||| || || ||||||||||||||||||    
T  11666070 gaagcacggacactccttgaattaggcgtgttccgatatcagacacgtgtcgtgtc 11666015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 235
Target Start/End: Complemental strand, 14209165 - 14209134
Alignment:
Q  204 gacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||    
T  14209165 gacacttgtaattacactgaattatgtgattt 14209134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 2941658 - 2941612
Alignment:
Q  162 cttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||| |||| | |||| |||||||||||||||||||||||||||    
T  2941658 cttggataaggcatatccccatgtcagacacgtgtcgtgtccgacac 2941612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 235
Target Start/End: Original strand, 4987299 - 4987329
Alignment:
Q  205 acacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||||||||||||||    
T  4987299 acacttgtaattacactgaattatgtgattt 4987329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 1509593 - 1509560
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  1509593 ccgacacttgtaattacactaaattatgtgattt 1509560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 4990972 - 4991005
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||| ||||    
T  4990972 ccgacacttgtaattacactgaattatgtaattt 4991005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 8587026 - 8587059
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  8587026 ccgacacttgtaattacacttaattatgtgattt 8587059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 8593191 - 8593158
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||| |||||||||||||||||    
T  8593191 ccgacacttgtaattatactgaattatgtgattt 8593158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 8842448 - 8842383
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  ||||| |||||||||||||| |||| ||  ||| |||||||||| |||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacac 8842383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 21256991 - 21257024
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||| |||||||||||||||||    
T  21256991 ccgacacttgtaattatactgaattatgtgattt 21257024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 27505300 - 27505267
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  27505300 ccgacacttgtaattacacttaattatgtgattt 27505267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 28812569 - 28812536
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||| ||||||||||||||||||||    
T  28812569 ccgacacttgtaactacactgaattatgtgattt 28812536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 34185128 - 34185161
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||| ||||||||    
T  34185128 ccgacacttgtaattacactgaattgtgtgattt 34185161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 34910371 - 34910338
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||| ||||||||||||||||||||||||||||    
T  34910371 ccgactcttgtaattacactgaattatgtgattt 34910338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 49651791 - 49651824
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||| |||||||||||||||    
T  49651791 ccgacacttgtaattacagtgaattatgtgattt 49651824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 51206358 - 51206391
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||| |||||||||||||||||||||    
T  51206358 ccgacacttgtatttacactgaattatgtgattt 51206391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 23292926 - 23293024
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt------ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  ||||| ||||||||||||||||  |||| ||||||||||||||      |||||||||||||||| |||||||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattt 23293024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 28964188 - 28964286
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtcc------gacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||| |||  ||||| ||||||||||||||||| |||| || | |||||||||||      ||||||||||||||||||||||||||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattt 28964286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 5414101 - 5414167
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact 209  Q
    ||||||||||||||  |||||||||| ||| |||||||  |||||||||||||||||||||||||||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacact 5414167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 42640643 - 42640550
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtc-gtgtccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  ||||| |||||||||||||||   || | |||||||||| |   ||||||||||||||||||||||||||||||||||    
T  42640643 ctatgaagcacggaaactcctcggattaggcgtgtcctggtgccggacacgtgtccgacaccgacacttgtaattacactgaattatgtgattt 42640550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 2625958 - 2626053
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtg--tccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||| ||||||| |||||||||||||  ||||| |||||| | | ||   ||||||| ||||||||||| ||||||||||||||    
T  2625958 cctatgaagcacggatactccttgaattaggcgtgtcctgatgtcggacacgcggcatggcaccgacacgtgtaattacaccgaattatgtgattt 2626053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 715545 - 715645
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt--------ccgacacttgtaattacactgaattatgtgatt 234  Q
    ||||||||||||||  ||||| ||||||||||||||||  |||| |||| |||||||||        || ||||||||||||||||||||||||||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 715644  T
Q  235 t 235  Q
    |    
T  715645 t 715645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 752871 - 752971
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt--------ccgacacttgtaattacactgaattatgtgatt 234  Q
    ||||||||||||||  ||||| ||||||||||||||||  |||| |||| |||||||||        || ||||||||||||||||||||||||||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 752970  T
Q  235 t 235  Q
    |    
T  752971 t 752971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 30982808 - 30982872
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||  ||| ||||||||||||||||||  |||| ||||||||||||||| |||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 30982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 19500786 - 19500852
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||| |||||||||||||||||| | |  | |||||  |||||||||||||||||    
T  19500786 cctatgaagcacggatactccttggattaggcgtgcctcggtatcagaggcgtgtcgtgtccgacac 19500852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 24613629 - 24613695
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  ||||| ||||||| |||||||   |||||||||||||||||||| |||||    
T  24613629 cctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacac 24613695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 49190206 - 49190144
Alignment:
Q  53 ttgagtttggctgaactcaaattctaatgtggtagcagagcctatccaatatccattggacca 115  Q
    |||||||||||| ||| ||||||||||  ||||| |||||||||||||| |||| ||||||||    
T  49190206 ttgagtttggctcaacccaaattctaagatggtatcagagcctatccaagatccgttggacca 49190144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 12797343 - 12797376
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  12797343 ccgacacttgtaattacactgaattatgtgattt 12797376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 12895214 - 12895279
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||| |  ||||| |||||||||||||||| ||||| || || |||||||||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacac 12895279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 19482799 - 19482738
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtcc 203  Q
    ||||||||||||| |  ||||| |||||||| |||||||| |||| ||||||||||||||||    
T  19482799 cctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtcc 19482738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 29205498 - 29205465
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  29205498 ccgacacttgtaattacactgaattatgtgattt 29205465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 3947702 - 3947766
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||  ||||| |||||||| ||||||   |||| |||||||||||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacac 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 16073514 - 16073415
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac------ttgtaattacactgaattatgtgattt 235  Q
    ||||||||||| |||  ||||| ||||||||||||||  | |||| |||| || |||||||||||||      ||||||||||||||||||||| |||||    
T  16073514 cctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgattt 16073415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 29205587 - 29205527
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtcc 203  Q
    |||||||||||| |  ||||| ||||||||||||||||| |||| |||| |||||||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 29205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 28084640 - 28084589
Alignment:
Q  146 tgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtc 197  Q
    |||||||||||  ||||| ||||||||||||||||| |||| ||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtc 28084589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 49431129 - 49431047
Alignment:
Q  159 ctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac------ttgtaattacactgaattatgtgattt 235  Q
    ||||| |||| |||||||||||  |||  |||||||||||||||||||||      || ||||||||||||||||||||||||    
T  49431129 ctcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgattt 49431047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 235
Target Start/End: Original strand, 11596360 - 11596390
Alignment:
Q  205 acacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||||||||||||||    
T  11596360 acacttgtaattacactgaattatgtgattt 11596390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 36635449 - 36635383
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact 209  Q
    ||||||||||||||  ||| | ||||||||||||||||  |||| ||| ||||||||||| ||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacact 36635383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 235
Target Start/End: Complemental strand, 40481687 - 40481657
Alignment:
Q  205 acacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgattt 40481657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Complemental strand, 40613513 - 40613471
Alignment:
Q  193 gtgtcgtgtccgacacttgtaattacactgaattatgtgattt 235  Q
    |||| ||||||||||| | ||||||||||||||||||||||||    
T  40613513 gtgttgtgtccgacacatataattacactgaattatgtgattt 40613471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 6485616 - 6485649
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  6485616 ccgacacttgtaattacactaaattatgtgattt 6485649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 6879470 - 6879503
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  6879470 ccgacacttgtaattacacttaattatgtgattt 6879503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 18966628 - 18966567
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccg 204  Q
    ||||||||||||||  |||||| |||||||||| ||||  |||| ||||||||| |||||||    
T  18966628 ctatgaagcacggacactccttagattaggcgtatcccgttgtcggacacgtgttgtgtccg 18966567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 21945557 - 21945524
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||| ||||    
T  21945557 ccgacacttgtaattacactgaattatgtcattt 21945524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 24232117 - 24232028
Alignment:
Q  20 cagtactcaccatacaagtcgattttgtatgggttgagtttggctgaactcaaattctaatgtggtagcagagcctatccaatatccatt 109  Q
    |||| |||||||||||||||| ||||||| |||||||||| |||  |||  ||||||||   ||| | |||||||||| ||| |||||||    
T  24232117 cagttctcaccatacaagtcggttttgtaagggttgagttaggcccaacctaaattctatgatggcatcagagcctatacaagatccatt 24232028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 30299001 - 30298968
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||| ||||    
T  30299001 ccgacacttgtaattacactgaattatgtcattt 30298968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 30327869 - 30327836
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||| ||||    
T  30327869 ccgacacttgtaattacactgaattatgtcattt 30327836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 54580028 - 54580061
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||| ||||||||||||||||||||||||    
T  54580028 ccgacacttataattacactgaattatgtgattt 54580061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 848080 - 848016
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||| ||||||  |||||||||||||| |||||||  |||  ||||||| |||||||||||||    
T  848080 tatgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacac 848016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 14465006 - 14465070
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||  |||||  |||||| ||||||||| ||||  |||||||||||||| |||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 28000747 - 28000779
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgatt 234  Q
    ||||||||||||||||||||||||||| |||||    
T  28000747 ccgacacttgtaattacactgaattatatgatt 28000779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 3025668 - 3025572
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact------tgtaattacactgaattatgtgattt 235  Q
    ||||||||||||  ||||| ||||||| |||||| || |||||||||||||||||||||||||||      | ||||||||||||||||||||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattt 3025572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 34450961 - 34451026
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  |||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 34451026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 3951476 - 3951541
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  ||||||||||||||||||| ||  |||||||||||||||||||| |||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacac 3951541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 18407839 - 18407740
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccg------acacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||  |||||   ||||||||||||| | |||| |||| ||||||||||||      |||||||||||||||||||||||||||||||    
T  18407839 cctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgattt 18407740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 29447040 - 29447104
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||  ||||| |||||||||||||||   |||||||||| |||||||||||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacac 29447104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 40332307 - 40332212
Alignment:
Q  146 tgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtcc------gacacttgtaattacactgaattatgtgattt 235  Q
    |||| ||||||  ||||| |||||||||| |||||  |||  ||||||||||||||||      ||||||||||||||||||||||||||||||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattt 40332212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 43737752 - 43737816
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||  |||||||||| |||||| ||||  |||||||||| |||||||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacac 43737816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 36450694 - 36450792
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccg------acacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||| ||  ||||| |||||||||||||||   |||| |||||| ||||||||||      |||||||||||||||||||||| ||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattt 36450792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 8343087 - 8342993
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgt-cgtgtccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||| ||  ||| | ||||||||||||||||  |||| ||||| ||| ||   |||||||||||||||||||| |||||||||||||    
T  8343087 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacatgtacgacaccgacacttgtaattacactaaattatgtgattt 8342993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 26902104 - 26902170
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact 209  Q
    ||||||||||||||  |||||  ||| |||||||||||  || ||||||||||||||||||||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacact 26902170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 29510232 - 29510298
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  ||||| |||||||| |||||||  |||| |||||| ||||||||||||||    
T  29510232 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacac 29510298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 4948706 - 4948673
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  4948706 ccgacacttgtaattacactgaattatgtgattt 4948673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 22652106 - 22652041
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  ||||| ||||||| ||||||||  |||| ||||| |||||||||||||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacac 22652041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 25566895 - 25566862
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  25566895 ccgacacttgtaattacactgaattatgtgattt 25566862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 31557097 - 31557017
Alignment:
Q  161 ccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac------ttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||   |||| |||| |||||||||| |||||      |||||||||||||||||||||||||||    
T  31557097 ccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgattt 31557017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 8343447 - 8343376
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacacttgta 213  Q
    |||||||||||| ||  ||| | ||||||||||||||||  |||| ||||||||||||||| ||||| ||||    
T  8343447 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgta 8343376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 5813712 - 5813646
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||| ||||||||||  |||||   ||||||||||||||  |||| |||||||||||||||||||||    
T  5813712 cctacgaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5813646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 26915202 - 26915240
Alignment:
Q  170 aggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  26915202 aggcgtgtcccaatgtctgacacgtatcgtgtccgacac 26915240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 2572061 - 2572094
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  2572061 ccgacacttgtaattacactaaattatgtgattt 2572094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 15816058 - 15816123
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  || || ||||||||||||||||  |||| ||  |||||||||||||||||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacac 15816123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 16641909 - 16641974
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||| ||  ||||| |||||||| |||||||  ||| |||||| |||||||||||||||    
T  16641909 ctatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacac 16641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 20873123 - 20873090
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  20873123 ccgacacttgtaattacactaaattatgtgattt 20873090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 24613574 - 24613541
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  24613574 ccgacacttgtaattacacttaattatgtgattt 24613541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 24669487 - 24669454
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||| ||||    
T  24669487 ccgacacttgtaattacactgaattatgtaattt 24669454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 233
Target Start/End: Original strand, 30077394 - 30077423
Alignment:
Q  204 gacacttgtaattacactgaattatgtgat 233  Q
    ||||||||||||||||||||||||||||||    
T  30077394 gacacttgtaattacactgaattatgtgat 30077423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 33405324 - 33405389
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||| ||||||||  ||| ||||||||| |||||||   ||||||||| ||||||||||||||||    
T  33405324 ctatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacac 33405389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 6065586 - 6065650
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgaca 207  Q
    ||||||||||||||  ||||||| |||| |||||| ||  |||| |||| |||||||||||||||    
T  6065586 ctatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgaca 6065650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 13009423 - 13009459
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtccc 180  Q
    |||||||||||||  ||||||||||||||||||||||    
T  13009423 tatgaagcacggacgctccttggattaggcgtgtccc 13009459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 203
Target Start/End: Original strand, 22943305 - 22943349
Alignment:
Q  159 ctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtcc 203  Q
    ||||| ||||||||||||||||  |||| ||||||||||||||||    
T  22943305 ctcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 22943349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 41831946 - 41831978
Alignment:
Q  203 cgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||| |||||||||||||||||||||    
T  41831946 cgacacttgtagttacactgaattatgtgattt 41831978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 2438661 - 2438757
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt------ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||  ||||| ||||||||||||||||  |||| |||| |||||||||      ||||||||||||||||||||||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 2438757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 24009414 - 24009349
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  |||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 24009349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 26769641 - 26769579
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccga 205  Q
    ||||||||||||||  ||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 26769579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 30717459 - 30717523
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgaca 207  Q
    ||||||||||||||  ||||||||||||||||| ||||| ||||  |||||||||||||||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgaca 30717523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 12224326 - 12224277
Alignment:
Q  159 ctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  12224326 ctccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacac 12224277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 12668352 - 12668408
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgt 199  Q
    ||||||||||||||| ||||| | |||||| |||||||||||||||| |||||||||    
T  12668352 ctatgaagcacggatactcctcgaattaggtgtgtcccaatgtcagatacgtgtcgt 12668408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 229
Target Start/End: Complemental strand, 21624374 - 21624294
Alignment:
Q  150 gcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtc-gtgtccgacacttgtaattacactgaattatg 229  Q
    |||||||  |||||||||||||| |||||||  |||| |||||||||| |   ||||||||||||||||||||||||||||    
T  21624374 gcacggacactccttggattaggtgtgtcccgctgtcggacacgtgtccgacaccgacacttgtaattacactgaattatg 21624294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 28596587 - 28596523
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||  ||||| |||||||| |||||| | |||| |||||||||||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacac 28596523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 36096304 - 36096368
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgaca 207  Q
    ||||||||||||||  ||| |||| | |||||||||||  |||||||||||||||||||||||||    
T  36096304 ctatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgaca 36096368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 18840953 - 18841051
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt------ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  ||||| |||||||| |||||||  |||| |||| |||||||||      |||||||||||||||||||| |||||||| ||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattt 18841051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Original strand, 34993921 - 34993988
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact 209  Q
    ||||||||||||| |  ||||||| ||||||||||||||| |||| ||||| |||||||| |||||||    
T  34993921 cctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacact 34993988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 38117099 - 38117197
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccg------acacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  | ||| ||||||||||||||||  |||| ||||||||| |||||||      |||||||||||||||| ||| ||||||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattt 38117197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 37419874 - 37419808
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  ||||| ||||||||||||||||  |||| ||||||  |||||||||||||    
T  37419874 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacac 37419808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 42511322 - 42511388
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact 209  Q
    ||||||||||||||  ||||| ||||||| ||||||||  |||| ||||||||| ||||||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacact 42511388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 11223793 - 11223857
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  |||||  |||||||||||||||  ||||||||| ||||||||||||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacac 11223857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 19536402 - 19536435
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  19536402 ccgacacttgtaattacactgaattatgtgattt 19536435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 30404855 - 30404888
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  30404855 ccgacacttgtaattacactgaattatgtgattt 30404888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 30717536 - 30717568
Alignment:
Q  203 cgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||||||||||||||||    
T  30717536 cgacacttgtaattacactgaattatgtgattt 30717568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 5040837 - 5040755
Alignment:
Q  159 ctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac------ttgtaattacactgaattatgtgattt 235  Q
    ||||||||| ||||||||||||   ||| ||||| |||||||||||||||      ||||||||||| |||||||||||||||    
T  5040837 ctccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattt 5040755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 233
Target Start/End: Complemental strand, 18422017 - 18421986
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgat 233  Q
    ||||||||||||||||||||||||||||||||    
T  18422017 ccgacacttgtaattacactgaattatgtgat 18421986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 19942382 - 19942319
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||| |||  ||||| ||||||||||||||||  |||||||||| || ||||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacac 19942319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 235
Target Start/End: Complemental strand, 33153476 - 33153445
Alignment:
Q  204 gacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||    
T  33153476 gacacttgtaattacactgaattatgtgattt 33153445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 37559096 - 37558998
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac------ttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  ||||| |||||| |||||| ||  |||| ||||||||||  |||||||||      ||||||||||| |||||||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgattt 37558998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 11223868 - 11223901
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||| ||||    
T  11223868 ccgacacttgtaattacactgaattatgttattt 11223901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 15657918 - 15657885
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||| |||||||||||||||||||||||||||    
T  15657918 ccgacatttgtaattacactgaattatgtgattt 15657885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 23058447 - 23058480
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||| ||||||||||||    
T  23058447 ccgacacttgtaattacactggattatgtgattt 23058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 35056998 - 35056933
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  |||||  ||||||||||||  |  |||| |||||||||||||||||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacac 35056933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 35449586 - 35449534
Alignment:
Q  183 tgtcagacacgtgtcgtgtccgacacttgtaattacactgaattatgtgattt 235  Q
    |||| |||| |||||||||| ||||| | ||||||||||||||| ||||||||    
T  35449586 tgtcggacatgtgtcgtgtctgacacatataattacactgaattctgtgattt 35449534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 44635552 - 44635520
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgatt 234  Q
    |||||||||||||||||||||||||| ||||||    
T  44635552 ccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 44860449 - 44860385
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||  ||||| | |||||| ||||||| ||||| ||||| |||||||||| ||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacac 44860385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 5409770 - 5409836
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  ||||| ||||||||||||||||  |||| |||||||||||||||||||||    
T  5409770 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 9778625 - 9778559
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||||  ||||||||||||||||||||||  |||| ||||||||| |||||||||||    
T  9778625 cctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacac 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 25482021 - 25481923
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac------ttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||| ||| ||| |||| ||||||  ||||||| ||||| | |||||||||||||      |||||||||||||||||||||||||||    
T  25482021 ctatgaagcacggatactctttgaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgtgattt 25481923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 25822785 - 25822723
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccga 205  Q
    ||||||| ||||||  |||||| |||||||| |||||| ||||||||||||||||||||||||    
T  25822785 ctatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccga 25822723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 21880271 - 21880173
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac------ttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||  || || |||||||||||||||   |||| |||| ||||||||||||||||      |||||||||||||||||||||| ||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattt 21880173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 29763129 - 29763187
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt 201  Q
    ||||||||||||||  ||||| |||||||||||||||  ||||| ||||||||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 598327 - 598262
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  || || ||||||||||||||||  |||| ||||||||||||||| |||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 598262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 18039053 - 18039020
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  18039053 ccgacacttgtaattacactgaattatgtgattt 18039020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 21560557 - 21560524
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  21560557 ccgacacttgtaattacactgaattatgtgattt 21560524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 24339696 - 24339663
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  24339696 ccgacacttgtaattacactgaattatgtgattt 24339663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 24339772 - 24339707
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||   ||||| ||||||||||||||||  |||| || ||||||||||||||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacac 24339707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 26033466 - 26033499
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  26033466 ccgacacttgtaattacactgaattatgtgattt 26033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 43027404 - 43027469
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  ||| | ||||||||||||||||  |||| ||||||||||||||| |||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 15680929 - 15680830
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccg------acacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||  ||||| | ||||| |||||| |  |||| |||||||||||||||||      |||||| |||||||||| |||||||||||||    
T  15680929 cctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattt 15680830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 21864927 - 21864829
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtcc------gacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||| ||  ||||| | ||||| ||||||||  |||| ||||||||||||||||      |||||||||||||||||| |||||| ||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgattt 21864829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 32093954 - 32094058
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaa-tgtcagacacgtgtcgtgtccgacac-----------ttgtaattacactgaattatgt 230  Q
    |||||||||||| |  ||||| ||||||||||||||||   |||| |||||||||||||||||||||           ||||||||||||||||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgt 32094053  T
Q  231 gattt 235  Q
    |||||    
T  32094054 gattt 32094058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 2334304 - 2334271
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  2334304 ccgacacttgtaattacactaaattatgtgattt 2334271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 3991378 - 3991345
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||| |||||||||||||||||    
T  3991378 ccgacacttgtaattatactgaattatgtgattt 3991345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 5409841 - 5409874
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||| ||||||||||||||||||    
T  5409841 ccgacacttgtaattgcactgaattatgtgattt 5409874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 7438760 - 7438727
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||| |||||||||||||||    
T  7438760 ccgacacttgtaattacattgaattatgtgattt 7438727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 9408339 - 9408372
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  9408339 ccgacacttgtaattacactaaattatgtgattt 9408372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 235
Target Start/End: Original strand, 13557750 - 13557779
Alignment:
Q  206 cacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||    
T  13557750 cacttgtaattacactgaattatgtgattt 13557779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 27945095 - 27945062
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||| ||||    
T  27945095 ccgacacttgtaattacactgaattatgtaattt 27945062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 13770744 - 13770712
Alignment:
Q  203 cgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||||||||||| ||||    
T  13770744 cgacacttgtaattacactgaattatgtaattt 13770712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 20549909 - 20549845
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||   ||||| |||||||||||||| || |||| |||| |||| |||||||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacac 20549845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 32287404 - 32287468
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||  ||||| |||||||| |||||||  |||| ||||| |||| ||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacac 32287468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 4821 - 4921
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt--------ccgacacttgtaattacactgaattatgtgatt 234  Q
    ||||||||||||||  ||||| ||||||||||||||||  |||| |||| |||||||||        || ||||||||||||||||||||||||||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 4920  T
Q  235 t 235  Q
    |    
T  4921 t 4921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 8721 - 8662
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt 201  Q
    |||||||||||||||  ||||||||||||||||| ||||| |||| ||||||||||||||    
T  8721 cctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgt 8662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 13523 - 13460
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||  |||||||||||||| |||||| | |||||||| |||||||||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacac 13460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 21804 - 21867
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||  |||||||||||||| |||||| | |||||||| |||||||||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacac 21867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 403 - 500
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgt------ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||  ||||| |||||||| |||||||  |||| |||||| |||||||      ||||||||||||||||||||||||| ||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattt 500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 4976 - 5041
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||| ||  ||||| ||||||||| |||| ||||||| |||||||||||||||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacac 5041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 241724 - 241659
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  || || ||||||||||||||||  |||| |||||||||||||||||||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 241659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 209
Target Start/End: Complemental strand, 3428 - 3361
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacact 209  Q
    |||||||||||||||  ||||| ||||||||||||||||| ||||   |||||||| |||||||||||    
T  3428 cctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacact 3361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 208
Target Start/End: Original strand, 3777 - 3843
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||| |||  ||||| |||||||||||||| | ||||| |||| ||||||||||||||||    
T  3777 cctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacac 3843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 235
Target Start/End: Original strand, 3856 - 3887
Alignment:
Q  204 gacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||    
T  3856 gacacttgtaattacactgaattatgtgattt 3887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 45490 - 45563
Alignment:
Q  163 ttggattaggcgtgtcccaatgtcagacacgtgtcgtgt------ccgacacttgtaattacactgaattatgt 230  Q
    ||||||||||| |||| |  |||||||||||||||||||      |||||||||||||||||||||||||||||    
T  45490 ttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 8917 - 8852
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||||  |||||  ||||||||||||| |  |||| |||||||||||||||||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac 8852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 23824 - 23791
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  23824 ccgacacttgtaattacactgaattatgtgattt 23791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 130536 - 130503
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||||    
T  130536 ccgacacttgtaattacactgaattatgtgattt 130503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 5926 - 5990
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||| |||||||  |||||||||| ||||||||| |  ||||||||||||||||||| ||||||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacac 5990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 92940 - 92876
Alignment:
Q  144 tatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||||  ||||| |||||||||||||||   |||| |||| ||||||||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacac 92876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 123682 - 123650
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgatt 234  Q
    |||||||||||||||||||||||||||||||||    
T  123682 ccgacacttgtaattacactgaattatgtgatt 123650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 235
Target Start/End: Complemental strand, 20224 - 20193
Alignment:
Q  204 gacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||||||||||||||||||||||||||    
T  20224 gacacttgtaattacactgaattatgtgattt 20193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 9678 - 9741
Alignment:
Q  145 atgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    ||||||||||||  ||||| ||||||  |||||||| |||||||||| |||||||||| |||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacac 9741  T

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Target: scaffold0450 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 8564 - 8626
Alignment:
Q  143 ctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccga 205  Q
    ||||||||||||||  ||||| | ||||||||||| ||| |||| ||||||| ||||||||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccga 8626  T

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Target: scaffold0246 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 235
Target Start/End: Complemental strand, 19626 - 19596
Alignment:
Q  205 acacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||||||||||||||    
T  19626 acacttgtaattacactgaattatgtgattt 19596  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 235
Target Start/End: Complemental strand, 51862 - 51832
Alignment:
Q  205 acacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattt 51832  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 208
Target Start/End: Complemental strand, 71856 - 71790
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtcccaatgtcagacacgtgtcgtgtccgacac 208  Q
    |||||||||||| ||  ||||| ||||||| ||||||||  |||| ||||||||| |||||||||||    
T  71856 cctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacac 71790  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 23474 - 23441
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||| ||||||||||||||||||||||||    
T  23474 ccgacacttataattacactgaattatgtgattt 23441  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 53234 - 53201
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    ||||||||| ||||||||||||||||||||||||    
T  53234 ccgacacttataattacactgaattatgtgattt 53201  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 46736 - 46703
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||| |||||||||||||||||||||||||||    
T  46736 ccgacatttgtaattacactgaattatgtgattt 46703  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Original strand, 17754 - 17787
Alignment:
Q  202 ccgacacttgtaattacactgaattatgtgattt 235  Q
    |||||||||||||||||||| |||||||||||||    
T  17754 ccgacacttgtaattacactaaattatgtgattt 17787  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 21279 - 21243
Alignment:
Q  142 cctatgaagcacggatcctccttggattaggcgtgtc 178  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  21279 cctatgaagcacggatactcctcggattaggcgtgtc 21243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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