View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4411_low_4 (Length: 580)
Name: NF4411_low_4
Description: NF4411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4411_low_4 |
 |  |
|
| [»] chr1 (3 HSPs) |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 373; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 15 - 580
Target Start/End: Original strand, 34118327 - 34118896
Alignment:
| Q |
15 |
cagagacccaagtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttt |
114 |
Q |
| |
|
||||||||| ||||||| |||||| ||||||||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
34118327 |
cagagaccctcgtcgcaccaccatctatttgatctacattatgccgacgggggatttagaatttgtgtgaggaagaaaggagtacggcggtcctaggttt |
34118426 |
T |
 |
| Q |
115 |
aaagagaaaggtgtacaacggctatctcttatgtttgttcttaaaaggagtacggtggctagaaagtacaaataattaatgacattcataataggttata |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
34118427 |
aaagagaaaggtgtacaacggctatctcttatgtttgttcatcaaaggagtacgacagctagaaagtacgaataattaatgacattcataataggttata |
34118526 |
T |
 |
| Q |
215 |
tcattaggggaagttgaattttaatcccaactataataa-tttttaattaaattttatttaacttccaatcaaattcagaattacgaatgtccctgatct |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||| |
|
|
| T |
34118527 |
tcattaggggaagttgaattttaatcccaactaaaataattttttaattaaattttatttaacttccaaccaaattcagaa-tactaatgtccctgatct |
34118625 |
T |
 |
| Q |
314 |
cctaaatatgaaagggttgagat--nnnnnnnctatattcaacttcacccaaatttataaaactatgaacatgtcttctcta--nnnnnnnnnnnnnnnn |
409 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34118626 |
cctaaatatgaaagggttgagataaaaaaaaactatattcaacttcacccaaatttataaaactatgaacatgtcttctctattttattttatttttttt |
34118725 |
T |
 |
| Q |
410 |
aaaatgtgtcatatataatcttatccttagacagcacaatcttgtccttttctttgatttagctaaccaatcaaattataaagtcatcaaactt-aaaaa |
508 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
34118726 |
aaaatgtgtcatatataatcttatccttagacagcacaatcttgtccttttctttgatttagctaaccaatcaaattataaagtcatcaaacttaaaaaa |
34118825 |
T |
 |
| Q |
509 |
atacattacaaaataagtagtgattagagtaaaagaagtgggtgaccacaccacagaagcaaaacaagagcc |
580 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34118826 |
atacattac-aaataagtagtgattagagtaaaagaagtgggtgaccacaccacagaagcaaaacaagagcc |
34118896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 616069 - 616179
Alignment:
| Q |
27 |
tcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaaggt |
126 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||| ||| |||||| ||||| |||||||| |
|
|
| T |
616069 |
tcgcaccaccatccatttgatctacatgacggcgacggtggatttggaatttgtgtgaggaagaaaggagtagggcagtcctaggtttattgagaaagga |
616168 |
T |
 |
| Q |
127 |
gtacaacggct |
137 |
Q |
| |
|
||| ||||||| |
|
|
| T |
616169 |
gtaaaacggct |
616179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 37 - 140
Target Start/End: Complemental strand, 39708623 - 39708517
Alignment:
| Q |
37 |
atccatttgatctacatga---tggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaaggtgtacaac |
133 |
Q |
| |
|
|||||||| |||||||||| |||||| || ||||||| |||||| ||||||||||||||||| ||| ||||||| || || ||||||||| |||| || |
|
|
| T |
39708623 |
atccattttatctacatgacgatggcggcggcggatttgaaatttgggtgaggaagaaaggagtgcggaggtcctaggtatagagagaaaggagtacgac |
39708524 |
T |
 |
| Q |
134 |
ggctatc |
140 |
Q |
| |
|
| ||||| |
|
|
| T |
39708523 |
gactatc |
39708517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 7766761 - 7766634
Alignment:
| Q |
26 |
gtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg |
125 |
Q |
| |
|
||||||| |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| | || |||||| |
|
|
| T |
7766761 |
gtcgcaccaccatccattagatctacatgatggcggcggcggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaggttaagagtgaaagg |
7766662 |
T |
 |
| Q |
126 |
tgtacaacggctatctcttatgtttgtt |
153 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
7766661 |
agtacaacggctatctcttatgtttgtt |
7766634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 18697281 - 18697382
Alignment:
| Q |
15 |
cagagacccaagtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttt |
114 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
18697281 |
cagagaccctcgtcgcaccaccatccatttgatctacgtgatggcggcggcggatttgaaatttgtgtgaggaagaaaggagtacgacggtcctaggttt |
18697380 |
T |
 |
| Q |
115 |
aa |
116 |
Q |
| |
|
|| |
|
|
| T |
18697381 |
aa |
18697382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 6030145 - 6030064
Alignment:
| Q |
27 |
tcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcct |
108 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||| | | ||||||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
6030145 |
tcgcaccaccatccatttgatctatatgatggcggcgacgaatttggaatttgtgtgaggaagaaaggagtagggcagtcct |
6030064 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 41355302 - 41355203
Alignment:
| Q |
26 |
gtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg |
125 |
Q |
| |
|
||||||| |||||||||||||||||||||||| || | |||| ||||||||||||||||||||||||||| ||||| ||| ||||| | ||||||| |
|
|
| T |
41355302 |
gtcgcaccaccatccatttgatctacatgatgacgacgacaaatttagaatttgtgtgaggaagaaaggagtaccgcggttctaggtttagaaagaaagg |
41355203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 7272145 - 7272204
Alignment:
| Q |
34 |
accatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaag |
93 |
Q |
| |
|
|||||||||||||||||||||| |||| | |||||||||||||||||||||||||||| |
|
|
| T |
7272145 |
accatccatttgatctacatgacggcgacgacggatttggaatttgtgtgaggaagaaag |
7272204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 26657073 - 26657147
Alignment:
| Q |
27 |
tcgcacgaccatccatttgatctacatgatggcggtgggg---gatttggaatttgtgtgaggaagaaaggagta |
98 |
Q |
| |
|
|||||| |||||||||||||||||||||| | || | | |||||||||||||||||||||||||||||||| |
|
|
| T |
26657073 |
tcgcaccaccatccatttgatctacatgacgacgacgacgacagatttggaatttgtgtgaggaagaaaggagta |
26657147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 26928661 - 26928735
Alignment:
| Q |
27 |
tcgcacgaccatccatttgatctacatgatggcggtgggg---gatttggaatttgtgtgaggaagaaaggagta |
98 |
Q |
| |
|
|||||| |||||||||||||||||||||| | || | | |||||||||||||||||||||||||||||||| |
|
|
| T |
26928661 |
tcgcaccaccatccatttgatctacatgacgacgacgacgacagatttggaatttgtgtgaggaagaaaggagta |
26928735 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 53202632 - 53202759
Alignment:
| Q |
26 |
gtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg |
125 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||| || |||||| |||||||||||||||||||||||||||||||| || ||||| | | || || |
|
|
| T |
53202632 |
gtcgcaccaccatccatttgatctacatgatgacgggggcggatttaaaatttgtgtgaggaagaaaggagtacggcggttttacgtttagaaaaaatgg |
53202731 |
T |
 |
| Q |
126 |
tgtacaacggctatctcttatgtttgtt |
153 |
Q |
| |
|
||||||||||||||||||||| |||| |
|
|
| T |
53202732 |
aatacaacggctatctcttatgtgtgtt |
53202759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 23053990 - 23053893
Alignment:
| Q |
28 |
cgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg |
125 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||| || |||||| ||||||||||||||| |||| |||||||||||||||| ||||| | ||||||| |
|
|
| T |
23053990 |
cgcaccaccatccagttgatctacatgatggcggcggtggatttagaatttgtgtgaggatgaaaagagtacggcggtcctaggtttagaaagaaagg |
23053893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 137
Target Start/End: Complemental strand, 47518206 - 47518097
Alignment:
| Q |
27 |
tcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaaggt |
126 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||| || ||||||||||||||||||| |||||||| |||||||||| || |||||| | ||||||| |
|
|
| T |
47518206 |
tcgcaccaccatccatttgatctacatgatgacggcggcagatttggaatttgtgtgagaaagaaaggggtacggcggttct-agtttagaaagaaagga |
47518108 |
T |
 |
| Q |
127 |
gtacaacggct |
137 |
Q |
| |
|
|||| |||||| |
|
|
| T |
47518107 |
gtacgacggct |
47518097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 10409179 - 10409302
Alignment:
| Q |
15 |
cagagacccaagtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttt |
114 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||||||||||| || |||||| |||||||| ||||||| |||||||| ||||||| ||| |||| |
|
|
| T |
10409179 |
cagagaccctcgtcgcaccaccatccatttgatctacatgatggcggcggcggatttagaatttgtttgaggaaaaaaggagtgcggcggttctaggttt |
10409278 |
T |
 |
| Q |
115 |
aaagagaaaggtgtacaacggcta |
138 |
Q |
| |
|
|| |||||| |||| ||||||| |
|
|
| T |
10409279 |
tgagggaaaggagtacgacggcta |
10409302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 17281713 - 17281589
Alignment:
| Q |
15 |
cagagacccaagtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttt |
114 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||||||| || || |||||||||||| || ||||||||||||||||||||||| ||| |||| |
|
|
| T |
17281713 |
cagagaccctcgtcgcaccaccatccatttgatctacatgatgacgacggcagatttggaatttatgcgaggaagaaaggagtacggcggttctaggttt |
17281614 |
T |
 |
| Q |
115 |
aaagagaaaggtgtacaacggctat |
139 |
Q |
| |
|
| | | ||||| |||| |||||||| |
|
|
| T |
17281613 |
agaaaaaaaggagtacgacggctat |
17281589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 1551346 - 1551219
Alignment:
| Q |
26 |
gtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg |
125 |
Q |
| |
|
||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| |||| ||| ||||| | ||||||| |
|
|
| T |
1551346 |
gtcgcaccaccatccatttgatctacatgatgatgacgacagatttggaatttgtgtgaggaagaaaggagtacaacggttctaggtttagaaagaaagg |
1551247 |
T |
 |
| Q |
126 |
tgtacaacggctatctcttatgtttgtt |
153 |
Q |
| |
|
|||| |||||||||||||||| |||| |
|
|
| T |
1551246 |
agtacggcggctatctcttatgtgtgtt |
1551219 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 4140751 - 4140851
Alignment:
| Q |
15 |
cagagacccaagtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttt |
114 |
Q |
| |
|
||||||||| || |||| |||||||||||||||||||||||| | || |||||||||||||||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
4140751 |
cagagacccttgttgcaccaccatccatttgatctacatgatgacaacggcggatttggaatttgtgtgaggaagaaagaagtacggcggttctaggttt |
4140850 |
T |
 |
| Q |
115 |
a |
115 |
Q |
| |
|
| |
|
|
| T |
4140851 |
a |
4140851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 17375639 - 17375738
Alignment:
| Q |
26 |
gtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg |
125 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||| | | | |||| |||||||||||||| | |||||||||||||||||||| |||| ||||||||| |
|
|
| T |
17375639 |
gtcgcaccaccatccatttgatccacatgatggcagcgacgaatttagaatttgtgtgaggcaaaaaggagtacggcggtcctagatttagagagaaagg |
17375738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 34660565 - 34660643
Alignment:
| Q |
34 |
accatccatttgatctacatgatggcggtgggg---gatttggaatttgtgtgaggaagaaaggagtacggcggtccta |
109 |
Q |
| |
|
||||||||||||||||| |||| ||||| | | |||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
34660565 |
accatccatttgatctatatgacggcggcgacgacggatttggaatttgtgtgaggaagaaaggagtagggcagtccta |
34660643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 1895757 - 1895811
Alignment:
| Q |
61 |
gtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttta |
115 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||||| |||| ||| ||||| |
|
|
| T |
1895757 |
gtggcggatttgaaatttgtgtgaggaagaaaggagtacgccggttctaggttta |
1895811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 4869953 - 4870022
Alignment:
| Q |
27 |
tcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagt |
97 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||| | | |||||| |||||||||||||||||||||||| |
|
|
| T |
4869953 |
tcgcaccaccatccatttgatctacatgacggc-gcgacggatttaaaatttgtgtgaggaagaaaggagt |
4870022 |
T |
 |
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Target: chr6 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 20740943 - 20741043
Alignment:
| Q |
16 |
agagacccaagtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagttta |
115 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||| | | | |||||| |||||||||||||||||||||||||| ||||| ||| ||||| |
|
|
| T |
20740943 |
agagaccctcgtcgcaccaccatccatttgatctacatgatgacagcagcggatttaaaatttgtgtgaggaagaaaggagtacagcggttctaggttta |
20741042 |
T |
 |
| Q |
116 |
a |
116 |
Q |
| |
|
| |
|
|
| T |
20741043 |
a |
20741043 |
T |
 |
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Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 21881834 - 21881933
Alignment:
| Q |
26 |
gtcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaagg |
125 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||| | |||||| ||||| || ||||||||||| ||||||| ||||||| ||||| ||||||||| |
|
|
| T |
21881834 |
gtcgcaccaccatccatttgatctacatgattgcggcgacagatttgtaatttatgagaggaagaaagtagtacggtggtcctaggtttagagagaaagg |
21881933 |
T |
 |
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Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 18269604 - 18269501
Alignment:
| Q |
27 |
tcgcacgaccatccatttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaaggt |
126 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| | | |||||| ||||| |||||||| |
|
|
| T |
18269604 |
tcgcaccaccattcatttgatctacatgatggcgacgacggatttggaatttgtgtgagggagaaaggagtaggacagtcctaggtttattgagaaagga |
18269505 |
T |
 |
| Q |
127 |
gtac |
130 |
Q |
| |
|
|||| |
|
|
| T |
18269504 |
gtac |
18269501 |
T |
 |
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Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 139
Target Start/End: Original strand, 3302958 - 3303057
Alignment:
| Q |
40 |
catttgatctacatgatggcggtgggggatttggaatttgtgtgaggaagaaaggagtacggcggtcctaagtttaaagagaaaggtgtacaacggctat |
139 |
Q |
| |
|
|||||||||||||||||||||| | | |||| |||||||||||| ||||||| |||||| |||| ||| |||| ||||||||| |||||||| |||| |
|
|
| T |
3302958 |
catttgatctacatgatggcggcgacgaatttaaaatttgtgtgagaaagaaagaagtacgacggttctagatttagagagaaaggagtacaacgactat |
3303057 |
T |
 |
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