View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4412-Insertion-3 (Length: 602)

Name: NF4412-Insertion-3
Description: NF4412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4412-Insertion-3
NF4412-Insertion-3
[»] chr2 (28 HSPs)
chr2 (8-338)||(33443422-33443751)
chr2 (338-597)||(17762683-17762954)
chr2 (383-589)||(1330997-1331207)
chr2 (337-458)||(5862651-5862773)
chr2 (339-512)||(15320540-15320719)
chr2 (341-599)||(28790450-28790719)
chr2 (380-567)||(44085473-44085664)
chr2 (351-593)||(12041472-12041716)
chr2 (332-446)||(41461017-41461132)
chr2 (339-442)||(44979805-44979909)
chr2 (351-567)||(12884486-12884698)
chr2 (469-560)||(21734501-21734594)
chr2 (391-560)||(27301393-27301571)
chr2 (489-559)||(6946460-6946530)
chr2 (380-442)||(11375886-11375948)
chr2 (390-593)||(13193893-13194105)
chr2 (502-600)||(11377521-11377621)
chr2 (420-571)||(11678021-11678178)
chr2 (420-571)||(11695499-11695656)
chr2 (339-442)||(42785665-42785769)
chr2 (469-560)||(31719987-31720077)
chr2 (534-599)||(21480676-21480741)
chr2 (354-442)||(44035264-44035353)
chr2 (383-442)||(36413676-36413735)
chr2 (337-442)||(19937161-19937266)
chr2 (513-599)||(30759507-30759593)
chr2 (499-560)||(22014079-22014140)
chr2 (533-590)||(44138962-44139019)
[»] chr3 (52 HSPs)
chr3 (352-600)||(17144594-17144855)
chr3 (351-561)||(38651901-38652115)
chr3 (351-567)||(55467547-55467769)
chr3 (351-458)||(54121976-54122083)
chr3 (486-599)||(55129823-55129936)
chr3 (351-593)||(2832265-2832526)
chr3 (469-591)||(22472960-22473085)
chr3 (355-567)||(52631997-52632214)
chr3 (380-446)||(26758208-26758274)
chr3 (380-458)||(45629177-45629255)
chr3 (382-493)||(45915184-45915299)
chr3 (338-442)||(43030358-43030463)
chr3 (449-561)||(4554754-4554865)
chr3 (380-457)||(20846454-20846533)
chr3 (501-560)||(8557862-8557921)
chr3 (347-458)||(46253452-46253563)
chr3 (380-442)||(6004423-6004485)
chr3 (356-593)||(44661881-44662125)
chr3 (509-567)||(48167387-48167445)
chr3 (450-559)||(20846540-20846646)
chr3 (499-560)||(25465914-25465975)
chr3 (514-567)||(26758352-26758405)
chr3 (416-567)||(4280300-4280461)
chr3 (452-539)||(5640658-5640744)
chr3 (452-539)||(5681430-5681516)
chr3 (449-588)||(5695601-5695739)
chr3 (351-442)||(21586879-21586970)
chr3 (338-444)||(26291990-26292097)
chr3 (509-559)||(38680930-38680980)
chr3 (352-458)||(42363245-42363351)
chr3 (509-571)||(45629312-45629374)
chr3 (354-458)||(8557978-8558082)
chr3 (394-458)||(27054073-27054137)
chr3 (338-443)||(51191645-51191752)
chr3 (383-442)||(4669683-4669742)
chr3 (452-539)||(5671933-5672019)
chr3 (351-446)||(10481677-10481772)
chr3 (351-458)||(22257519-22257626)
chr3 (383-446)||(22473123-22473186)
chr3 (383-446)||(25919285-25919348)
chr3 (351-442)||(32880256-32880347)
chr3 (351-406)||(37044876-37044931)
chr3 (473-560)||(37045396-37045483)
chr3 (452-567)||(42363123-42363237)
chr3 (351-442)||(50562606-50562697)
chr3 (383-442)||(51149693-51149752)
chr3 (450-516)||(10481592-10481658)
chr3 (337-446)||(40483863-40483973)
chr3 (509-567)||(44651082-44651140)
chr3 (449-567)||(50578904-50579022)
chr3 (503-560)||(25919165-25919222)
chr3 (350-446)||(2566362-2566458)
[»] chr1 (57 HSPs)
chr1 (380-589)||(35980157-35980366)
chr1 (351-599)||(8268612-8268854)
chr1 (350-567)||(34914088-34914308)
chr1 (351-599)||(10847401-10847649)
chr1 (358-586)||(16537722-16537957)
chr1 (351-491)||(35980374-35980514)
chr1 (359-560)||(32910277-32910488)
chr1 (449-589)||(35992480-35992620)
chr1 (352-567)||(6248033-6248257)
chr1 (503-590)||(15880029-15880116)
chr1 (351-458)||(27507511-27507618)
chr1 (339-444)||(36203477-36203583)
chr1 (462-567)||(382138-382243)
chr1 (351-446)||(2490060-2490155)
chr1 (351-458)||(3935412-3935519)
chr1 (500-599)||(32937953-32938051)
chr1 (449-557)||(23475020-23475126)
chr1 (339-442)||(51252451-51252555)
chr1 (352-458)||(50471183-50471289)
chr1 (338-442)||(16529536-16529641)
chr1 (416-536)||(50951967-50952092)
chr1 (338-447)||(25560030-25560137)
chr1 (390-493)||(52828817-52828924)
chr1 (397-523)||(9330388-9330518)
chr1 (503-594)||(15882028-15882119)
chr1 (449-540)||(17651820-17651910)
chr1 (532-599)||(29923183-29923250)
chr1 (509-599)||(36797906-36797997)
chr1 (501-599)||(39158193-39158291)
chr1 (338-446)||(12973501-12973610)
chr1 (449-560)||(11074304-11074413)
chr1 (338-442)||(44918490-44918589)
chr1 (449-559)||(9962055-9962166)
chr1 (351-446)||(21685574-21685669)
chr1 (351-446)||(24629903-24629993)
chr1 (351-458)||(26345078-26345185)
chr1 (509-567)||(6694274-6694332)
chr1 (351-457)||(17989003-17989108)
chr1 (525-599)||(25507001-25507075)
chr1 (337-446)||(40095453-40095563)
chr1 (503-593)||(47984376-47984466)
chr1 (353-442)||(1161778-1161867)
chr1 (507-560)||(40095324-40095377)
chr1 (509-561)||(8165454-8165506)
chr1 (339-442)||(39256672-39256776)
chr1 (394-458)||(50153407-50153471)
chr1 (383-442)||(8211266-8211325)
chr1 (351-442)||(29388988-29389079)
chr1 (340-442)||(32953982-32954084)
chr1 (513-567)||(26344954-26345008)
chr1 (461-567)||(12973640-12973745)
chr1 (566-599)||(25532881-25532914)
chr1 (509-593)||(36203312-36203396)
chr1 (339-446)||(11074431-11074538)
chr1 (488-560)||(17989154-17989226)
chr1 (351-443)||(39127429-39127521)
chr1 (350-446)||(47984532-47984628)
[»] chr4 (52 HSPs)
chr4 (351-589)||(48293290-48293532)
chr4 (351-593)||(48338297-48338546)
chr4 (390-571)||(45983378-45983565)
chr4 (391-560)||(48602433-48602606)
chr4 (353-446)||(20986379-20986472)
chr4 (351-516)||(36106372-36106547)
chr4 (498-598)||(48684891-48684991)
chr4 (532-599)||(18881914-18881981)
chr4 (355-444)||(4642381-4642470)
chr4 (339-458)||(23120277-23120397)
chr4 (351-458)||(5122404-5122511)
chr4 (351-493)||(23449964-23450111)
chr4 (419-560)||(46471463-46471608)
chr4 (449-561)||(15723950-15724062)
chr4 (469-599)||(40494506-40494631)
chr4 (335-442)||(43630516-43630624)
chr4 (500-567)||(8312002-8312069)
chr4 (351-446)||(11031672-11031762)
chr4 (449-557)||(29700786-29700894)
chr4 (499-598)||(51907180-51907279)
chr4 (509-599)||(4688799-4688889)
chr4 (454-560)||(6101951-6102057)
chr4 (509-599)||(17845010-17845100)
chr4 (416-560)||(29232773-29232918)
chr4 (449-553)||(32223231-32223333)
chr4 (339-426)||(6333259-6333347)
chr4 (390-458)||(15723876-15723944)
chr4 (339-442)||(40900119-40900223)
chr4 (499-571)||(49640954-49641026)
chr4 (449-560)||(18536547-18536658)
chr4 (351-442)||(40806854-40806945)
chr4 (380-442)||(5262000-5262062)
chr4 (380-446)||(23625933-23625999)
chr4 (350-446)||(19753553-19753649)
chr4 (350-446)||(19786157-19786253)
chr4 (351-443)||(21069001-21069093)
chr4 (509-561)||(23120159-23120211)
chr4 (355-446)||(8484625-8484716)
chr4 (383-442)||(18536680-18536739)
chr4 (383-442)||(29636761-29636820)
chr4 (383-442)||(29644161-29644220)
chr4 (383-442)||(36077560-36077619)
chr4 (383-442)||(48996072-48996131)
chr4 (383-442)||(50570994-50571053)
chr4 (396-445)||(8311885-8311934)
chr4 (338-442)||(23937554-23937659)
chr4 (449-510)||(29335072-29335133)
chr4 (390-479)||(41325090-41325179)
chr4 (332-439)||(10218614-10218722)
chr4 (390-446)||(18396323-18396379)
chr4 (339-442)||(32223355-32223459)
chr4 (351-407)||(52344693-52344749)
[»] chr5 (41 HSPs)
chr5 (351-584)||(27571925-27572172)
chr5 (357-599)||(2588936-2589186)
chr5 (501-599)||(18845628-18845726)
chr5 (499-599)||(6718701-6718801)
chr5 (416-589)||(40331377-40331552)
chr5 (352-458)||(35240844-35240950)
chr5 (339-567)||(36567664-36567892)
chr5 (353-446)||(25495042-25495135)
chr5 (350-446)||(40884285-40884381)
chr5 (449-567)||(14652516-14652635)
chr5 (536-599)||(20191814-20191877)
chr5 (351-442)||(30265827-30265918)
chr5 (449-571)||(6633383-6633504)
chr5 (501-567)||(11402709-11402775)
chr5 (500-597)||(12263976-12264072)
chr5 (469-556)||(34969413-34969499)
chr5 (368-458)||(28224884-28224974)
chr5 (418-560)||(36760136-36760284)
chr5 (339-411)||(10090248-10090321)
chr5 (423-492)||(12379009-12379078)
chr5 (420-557)||(20191890-20192037)
chr5 (509-561)||(691465-691517)
chr5 (503-595)||(18432202-18432294)
chr5 (482-597)||(35727049-35727165)
chr5 (351-442)||(333313-333404)
chr5 (383-442)||(8408978-8409037)
chr5 (351-446)||(40692451-40692545)
chr5 (509-560)||(41454992-41455043)
chr5 (380-442)||(12166200-12166262)
chr5 (380-442)||(36177141-36177203)
chr5 (534-599)||(6894284-6894349)
chr5 (402-458)||(17132110-17132166)
chr5 (402-458)||(32244396-32244452)
chr5 (380-440)||(42544643-42544703)
chr5 (449-540)||(6895262-6895352)
chr5 (383-442)||(11917393-11917452)
chr5 (383-442)||(27886452-27886511)
chr5 (384-442)||(2226920-2226978)
chr5 (499-572)||(7487215-7487288)
chr5 (509-561)||(6595105-6595157)
chr5 (331-442)||(38433632-38433744)
[»] scaffold0204 (2 HSPs)
scaffold0204 (351-593)||(25819-26068)
scaffold0204 (351-566)||(14478-14701)
[»] chr8 (38 HSPs)
chr8 (351-571)||(22811084-22811300)
chr8 (488-597)||(12074060-12074169)
chr8 (339-446)||(11218892-11219000)
chr8 (499-594)||(3129439-3129534)
chr8 (416-600)||(12660128-12660318)
chr8 (339-559)||(40436378-40436607)
chr8 (342-446)||(24682122-24682227)
chr8 (339-442)||(33068208-33068312)
chr8 (509-599)||(41346016-41346107)
chr8 (337-442)||(10661094-10661200)
chr8 (339-442)||(36910367-36910471)
chr8 (351-446)||(33565910-33566007)
chr8 (509-591)||(38926308-38926390)
chr8 (499-599)||(28801726-28801826)
chr8 (351-458)||(44336727-44336835)
chr8 (449-568)||(4785304-4785418)
chr8 (380-599)||(7428310-7428531)
chr8 (449-560)||(9012748-9012856)
chr8 (350-458)||(36340780-36340888)
chr8 (509-598)||(12912612-12912702)
chr8 (486-555)||(6617027-6617096)
chr8 (422-567)||(12193368-12193514)
chr8 (422-567)||(12437796-12437942)
chr8 (350-403)||(30254206-30254259)
chr8 (380-444)||(4785220-4785284)
chr8 (380-432)||(8036027-8036079)
chr8 (383-442)||(3006608-3006667)
chr8 (383-442)||(5803282-5803341)
chr8 (337-443)||(28073226-28073333)
chr8 (416-446)||(6591248-6591278)
chr8 (461-555)||(6591308-6591401)
chr8 (380-442)||(14549208-14549270)
chr8 (416-458)||(31497619-31497661)
chr8 (339-431)||(12883777-12883870)
chr8 (459-492)||(30254097-30254130)
chr8 (469-560)||(15272209-15272300)
chr8 (469-560)||(15452578-15452669)
chr8 (509-561)||(31497510-31497562)
[»] chr6 (32 HSPs)
chr6 (416-599)||(8064516-8064699)
chr6 (366-599)||(4562827-4563069)
chr6 (340-560)||(24644867-24645091)
chr6 (469-573)||(14564516-14564620)
chr6 (351-557)||(29048082-29048291)
chr6 (380-599)||(30752515-30752750)
chr6 (357-560)||(9686019-9686220)
chr6 (385-592)||(14940454-14940665)
chr6 (338-572)||(20500506-20500742)
chr6 (451-599)||(13859256-13859400)
chr6 (339-479)||(35040209-35040350)
chr6 (339-446)||(22413780-22413888)
chr6 (351-567)||(892237-892468)
chr6 (351-442)||(10494417-10494508)
chr6 (351-589)||(19134987-19135240)
chr6 (351-458)||(11417010-11417118)
chr6 (469-593)||(28633023-28633145)
chr6 (351-442)||(10590806-10590897)
chr6 (509-560)||(12108471-12108522)
chr6 (339-442)||(13810905-13811009)
chr6 (358-454)||(32190694-32190790)
chr6 (351-442)||(5287940-5288031)
chr6 (390-444)||(25006365-25006419)
chr6 (351-562)||(31945337-31945551)
chr6 (449-540)||(32190591-32190684)
chr6 (383-442)||(5874188-5874247)
chr6 (351-458)||(6266859-6266966)
chr6 (383-442)||(12270544-12270603)
chr6 (509-562)||(8135540-8135593)
chr6 (519-599)||(4577220-4577300)
chr6 (339-402)||(8135378-8135442)
chr6 (390-458)||(29128976-29129044)
[»] chr7 (56 HSPs)
chr7 (347-446)||(26215156-26215255)
chr7 (488-593)||(43202533-43202638)
chr7 (499-599)||(26524810-26524910)
chr7 (385-567)||(8118187-8118373)
chr7 (351-446)||(8568586-8568681)
chr7 (352-593)||(23032630-23032886)
chr7 (450-567)||(30079490-30079605)
chr7 (451-560)||(37375389-37375497)
chr7 (351-442)||(27054768-27054859)
chr7 (350-445)||(31287812-31287907)
chr7 (449-559)||(29211554-29211663)
chr7 (390-593)||(524748-524954)
chr7 (469-593)||(26214982-26215106)
chr7 (339-589)||(29628050-29628304)
chr7 (503-599)||(21237648-21237745)
chr7 (339-458)||(32942099-32942219)
chr7 (380-529)||(46147200-46147359)
chr7 (488-599)||(20306704-20306815)
chr7 (499-600)||(33434229-33434333)
chr7 (459-560)||(6880009-6880110)
chr7 (499-556)||(27215107-27215164)
chr7 (543-599)||(2734490-2734546)
chr7 (449-593)||(11399187-11399329)
chr7 (350-458)||(35820107-35820215)
chr7 (499-599)||(47483730-47483830)
chr7 (383-442)||(12117587-12117646)
chr7 (355-446)||(23729347-23729438)
chr7 (383-442)||(47903235-47903294)
chr7 (380-442)||(13852293-13852355)
chr7 (380-446)||(20334568-20334634)
chr7 (380-442)||(31876666-31876728)
chr7 (380-442)||(31983032-31983094)
chr7 (416-458)||(40848871-40848913)
chr7 (499-572)||(2308002-2308075)
chr7 (339-493)||(10338786-10338950)
chr7 (353-446)||(34750945-34751038)
chr7 (449-593)||(40848919-40849062)
chr7 (509-561)||(27100925-27100977)
chr7 (509-561)||(27177326-27177378)
chr7 (449-528)||(32942013-32942093)
chr7 (383-442)||(3213258-3213317)
chr7 (383-442)||(8768999-8769058)
chr7 (383-442)||(10671808-10671867)
chr7 (488-559)||(41459273-41459344)
chr7 (383-442)||(47069656-47069715)
chr7 (383-442)||(47204493-47204552)
chr7 (380-442)||(7209305-7209367)
chr7 (380-442)||(43429160-43429222)
chr7 (459-540)||(1032947-1033028)
chr7 (503-567)||(30855207-30855272)
chr7 (509-566)||(31287672-31287729)
chr7 (394-446)||(7697283-7697334)
chr7 (503-559)||(23675492-23675548)
chr7 (394-446)||(23707135-23707187)
chr7 (416-444)||(43202449-43202477)
chr7 (414-446)||(47646752-47646784)
[»] scaffold0688 (4 HSPs)
scaffold0688 (500-599)||(1277-1375)
scaffold0688 (500-599)||(7846-7944)
scaffold0688 (356-406)||(1119-1169)
scaffold0688 (356-406)||(7688-7738)
[»] scaffold0013 (2 HSPs)
scaffold0013 (339-443)||(105972-106077)
scaffold0013 (351-442)||(128592-128683)
[»] scaffold0059 (1 HSPs)
scaffold0059 (339-442)||(69576-69680)
[»] scaffold0015 (1 HSPs)
scaffold0015 (350-458)||(62354-62462)
[»] scaffold0664 (1 HSPs)
scaffold0664 (449-556)||(6064-6171)
[»] scaffold0470 (1 HSPs)
scaffold0470 (486-555)||(6345-6414)
[»] scaffold0308 (1 HSPs)
scaffold0308 (331-442)||(5919-6031)


Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 8 - 338
Target Start/End: Complemental strand, 33443751 - 33443422
Alignment:
Q  8 ggtttcagtgtctatatcggaattttctcgtgttttcctggaatctcttttcgacggaggttcgccgtcgtctttctctgagctggtggcaatttttgct 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||     
T  33443751 ggtttcagtgtctatatcggaattttctcgtgttttcctggaatctcttttcgacggaggttcgccgtcgtctttctctgagctggtggcgattttcgcc 33443652  T
Q  108 ggagcaccgttgccgttaacgcttctcgacattttcgtttggtatcgcagtgtcagtgactgagtcgagtttcagaattaactcggaagatatgggcctc 207  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||    
T  33443651 ggagcaccgttcccgttaacgtttctcgacattttcgtttggtttcgcagtgtcactgactgagtcgagtttcagaattaactcggtagatgtgggcctc 33443552  T
Q  208 gttagacttgattgggctaaagcccaataaaatacgggccctatcatttgttgaaaagtttgtttttcagatgaaaagatgttacatgcaccacacaaaa 307  Q
    |||||||| |||||||||||| ||||||| | |||||||| ||| ||||    |||| |||||||||  |||| ||   ||||| ||||||| |||||||    
T  33443551 gttagactcgattgggctaaaacccaatatattacgggccttatgattttaacaaaattttgttttttggatg-aagtttgttatatgcaccgcacaaaa 33443453  T
Q  308 ttaacatcctcacctaccattgcattttgat 338  Q
    |||||||||||||||||||||||||||||||    
T  33443452 ttaacatcctcacctaccattgcattttgat 33443422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 338 - 597
Target Start/End: Original strand, 17762683 - 17762954
Alignment:
Q  338 ttaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgactt 436  Q
    ||||||||||||  |||| ||||| ||||| ||||||||| | |||||| || |||||| ||||||||||  |||  | |||||||||||||||||||||    
T  17762683 ttaggggtgttcgcggtgtggttttgtttggttttgaggctaaaagtcaaccgaaccgcgagataaaaaaacatgcggtttggtttggttcggttgactt 17762782  T
Q  437 ttaaaataaattccaaaccaaagc----------ggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaa 526  Q
    |||||||||| ||| ||||||| |          |||||| ||||||| ||||| ||||| |||||||||  ||||||||| ||||||||||||||| ||    
T  17762783 ttaaaataaaatccgaaccaaatcaaaccgatgtggtttggattggattggttggtgcggtttttttcgagacaatacaattttttgtttccaacattaa 17762882  T
Q  527 aatta-agttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaa 597  Q
    ||||  ||||||||| ||| ||| ||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  17762883 aatttgagttaaaaagctataacgcaacatattttcagcaatgtttccgacaatgttttaaatttcatccaa 17762954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 383 - 589
Target Start/End: Original strand, 1330997 - 1331207
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaagc-----ggtttgaattggatcgg 477  Q
    |||||| |||| |||| |||||||| ||| || ||||||||||||||||||||||||||||||| ||||||||||| |     ||||||  ||||||| |    
T  1330997 tcatccgaaccacaaggtaaaaaagcatgcagattggtttggttcggttgacttttaaaataaaatccaaaccaaaccaatgtggtttgggttggatcag 1331096  T
Q  478 ttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaaca 577  Q
    ||| ||||| |||||||||  ||||||||| ||||||||||||||| |||||  |||| ||||  |||||||||||||||||| |||||||||| | |||    
T  1331097 ttggtgcggtttttttcgagacaatacaattttttgtttccaacattaaaatcgagtt-aaaaggtaaaacacaacatattttcagcaatattttcgaca 1331195  T
Q  578 atgttttaaatt 589  Q
    || |||| ||||    
T  1331196 atatttttaatt 1331207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 337 - 458
Target Start/End: Complemental strand, 5862773 - 5862651
Alignment:
Q  337 attaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgact 435  Q
    |||||||||||||  ||||||||||| |||||||||||||  | |||||||| ||| ||||| |||||||||||||  | ||||||||||||||||||||    
T  5862773 attaggggtgttcgcggtgcggtttgatttgattttgagggtaaaagtcatctaaatcgcaaaataaaaaagtatgcggtttggtttggttcggttgact 5862674  T
Q  436 tttaaaataaattccaaaccaaa 458  Q
    ||||||||||| ||| |||||||    
T  5862673 tttaaaataaaatccgaaccaaa 5862651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 339 - 512
Target Start/End: Complemental strand, 15320719 - 15320540
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  |||||||||||||| ||||||||||| | |||||||||||||||  |  |||||||| ||| || | |||||||||| ||||| |||    
T  15320719 taggggtgttcgcggtgcggtttggttcgattttgaggctaaaagtcatccaaaccgtgaagtaaaaaagcatgcagttaggtttggttcagttgatttt 15320620  T
Q  438 taaaataaattccaaaccaaa-----gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatctttt 512  Q
    ||||||||| |||||||||||     | ||||||  |||||| ||||||||||| |||||||||  ||||||||| ||||    
T  15320619 taaaataaaatccaaaccaaactaatgtggtttgttttggattggttgatgcggtttttttcgagacaatacaatttttt 15320540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 341 - 599
Target Start/End: Original strand, 28790450 - 28790719
Alignment:
Q  341 ggggtgttc-tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgactttta 439  Q
    ||||||||| |||||||||||||||   |||||| |  | ||||||||  |||||||||||||||||| |||  | ||| || | |||||||||||||||    
T  28790450 ggggtgttcgtggtgcggtttggttcagttttgatgttaaaagtcatctgaaccgcaagataaaaaagcatgcggtttgattagattcggttgactttta 28790549  T
Q  440 aaataaattccaaaccaaa----------gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaat 529  Q
    ||||||| |||||||||||          | ||||||  | |||||||||| ||||| ||||| |||   |||||||| ||||||||||||||| |||||    
T  28790550 aaataaaatccaaaccaaaccaaaccaatgtggtttgggtcggatcggttggtgcggttttttccgagataatacaattttttgtttccaacattaaaat 28790649  T
Q  530 taagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
      ||||||||| ||| ||||||||||||||  | |||| ||    ||||| |||||||||||||||||||    
T  28790650 cgagttaaaaagctataacacaacatatttccaacaatgttcttgacaatattttaaatttcatccaaca 28790719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 380 - 567
Target Start/End: Original strand, 44085473 - 44085664
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaa-gtatgaaggttggtttggttcggttgacttttaaaataaattc-----caaaccaaagcggtttgaattgga 473  Q
    ||||||||  ||||||||||||||||| | |||  | |||||||||||||||||||||| |||||||| ||     |||||||| ||||||||  |||||    
T  44085473 aagtcatctgaaccgcaagataaaaaaagcatgcggtttggtttggttcggttgactttaaaaataaaatctgaatcaaaccaatgcggtttgggttgga 44085572  T
Q  474 tcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaat 567  Q
    ||||||| ||||| || ||||||  ||| ||||| |||| |||||||||| ||||| |||||||||| |  |||||||||||||||| ||||||    
T  44085573 tcggttggtgcgg-ttatttcgagacaacacaatttttt-tttccaacattaaaatcaagttaaaaagccgaaacacaacatattttcagcaat 44085664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 351 - 593
Target Start/End: Complemental strand, 12041716 - 12041472
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt-- 448  Q
    |||| ||||||||| | ||||||||| | ||||||||  ||||| |||||||||||  |||  | ||| ||||||||||||||||||||||||||| |      
T  12041716 ggtgtggtttggttcggttttgaggctaaaagtcatctgaaccgtaagataaaaaaacatgcggtttgatttggttcggttgacttttaaaataaaatcc 12041617  T
Q  449 ---ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaa 545  Q
       ||||||||| |||| |||  |||||||||||| ||| |||||||||||  || |||||| |||| ||| |||||| |||||  |||||||||  |||    
T  12041616 gaaccaaaccaatgcgg-ttgggttggatcggttggtgc-ggttttttcgaaacagtacaattttttatttacaacattaaaatcgagttaaaaaggtaa 12041519  T
Q  546 aacacaacatatttttagcaatatttccaacaatgttttaaatttcat 593  Q
    || |||||||||||  |||||| ||| | ||||||||||  |||||||    
T  12041518 aatacaacatatttccagcaatgttt-cgacaatgtttttcatttcat 12041472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 332 - 446
Target Start/End: Original strand, 41461017 - 41461132
Alignment:
Q  332 ttttgattaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggt 430  Q
    ||||||||||||||||||  ||||| |||||||| | |||| || | | |||||| || ||||||||| ||||||||||||  | |||||||||||||||    
T  41461017 ttttgattaggggtgttcgcggtgcagtttggttcggtttttagactaaaagtcaaccgaaccgcaagctaaaaaagtatgcggtttggtttggttcggt 41461116  T
Q  431 tgacttttaaaataaa 446  Q
    ||||||||||||||||    
T  41461117 tgacttttaaaataaa 41461132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 442
Target Start/End: Complemental strand, 44979909 - 44979805
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  |||||||||||||| | |||||||   | |||||||||||||||| ||||||||||| |||  | |||||||||||||||||| |||    
T  44979909 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttt 44979810  T
Q  438 taaaa 442  Q
    |||||    
T  44979809 taaaa 44979805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 567
Target Start/End: Original strand, 12884486 - 12884698
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||||||||||||| |||||| |||  | ||||||||||||| ||| | ||||||||||||      ||||||||| ||||||||||||||||||| | |    
T  12884486 ggtgcggtttggttcgattttaaggttaaaagtcatccaaactgcatggtaaaaaagtatg-----cggtttggtttggttgacttttaaaataaaattc 12884580  T
Q  451 aaaccaaagc---ggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaa 547  Q
    |||||||| |   |||||  ||||||||||||  ||||| |||||| ||  |||||     |||||||  |||||| ||||| || | |||||  |||||    
T  12884581 aaaccaaaccaatggttttgattggatcggttagtgcggtttttttaga--caatattggtttttgttgacaacattaaaatcaaatgaaaaacgtaaaa 12884678  T
Q  548 cacaacatatttttagcaat 567  Q
    ||||||||||||| ||||||    
T  12884679 cacaacatattttcagcaat 12884698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 469 - 560
Target Start/End: Complemental strand, 21734594 - 21734501
Alignment:
Q  469 ttggatcggttgatgcgggttttttc--gatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    |||||||||||||||||| |||||||  ||  ||||||||| |||| ||| |||||| |||||| || ||||| ||||||||||||||||||||    
T  21734594 ttggatcggttgatgcggtttttttctcgagacaatacaattttttattttcaacattaaaattgagataaaacactaaaacacaacatatttt 21734501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 391 - 560
Target Start/End: Complemental strand, 27301571 - 27301393
Alignment:
Q  391 accgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt----------ccaaaccaaagcggtttgaattggatcggttg 480  Q
    ||||||||||||||||| |||  | |||||||| |||||||||||||||||||||| |          ||||||||| ||||||||  |  ||||| |||    
T  27301571 accgcaagataaaaaagcatgcggtttggtttgattcggttgacttttaaaataaaatttgaaccaaaccaaaccaatgcggtttgggtcagatcgtttg 27301472  T
Q  481 atgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
     ||| |||||||| ||  ||||||||| |||||||||||| || |||||  |||||||||  |||||||||| |||||||    
T  27301471 gtgc-ggtttttttgagacaatacaattttttgtttccaaaattaaaatcgagttaaaaaggtaaaacacaaaatatttt 27301393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 489 - 559
Target Start/End: Complemental strand, 6946530 - 6946460
Alignment:
Q  489 tttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattt 559  Q
    ||||||||  ||||||||| ||||||||||||||| ||||| ||||||||||  ||||||||||| |||||    
T  6946530 tttttcgagacaatacaattttttgtttccaacattaaaatcaagttaaaaaggtaaaacacaacttattt 6946460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 11375886 - 11375948
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||||| ||||||||||  ||| || |||||||||||||||||| ||||||||    
T  11375886 aagtcatccaaaccgcgagataaaaaaacatgcagtttggtttggttcggttgatttttaaaa 11375948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 390 - 593
Target Start/End: Original strand, 13193893 - 13194105
Alignment:
Q  390 aaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattc----------caaaccaaagcggtttgaattggatcggtt 479  Q
    ||||| |||||||||||| ||   | ||||||||||||||||||||||||||||||| ||          |||||||| || |||||  |||||||||||    
T  13193893 aaccgtaagataaaaaagcatactgtttggtttggttcggttgacttttaaaataaaatccgaaccaaatcaaaccaatgcagtttgggttggatcggtt 13193992  T
Q  480 gatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaat 579  Q
    | | | ||||||||| |   |||||||| |||||||| |||||| |||||| |||||||||   ||||||| ||||| ||    |||| |||||| ||||    
T  13193993 ggtac-ggttttttcaagataatacaattttttgttttcaacattaaaattgagttaaaaaggcaaaacaccacatagttccgacaatgtttccatcaat 13194091  T
Q  580 gttttaaatttcat 593  Q
    ||||| ||||||||    
T  13194092 gtttttaatttcat 13194105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 502 - 600
Target Start/End: Complemental strand, 11377621 - 11377521
Alignment:
Q  502 tacaatcttttgtttccaacatcaaaattaagtt--aaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    |||||| ||||||||||||||| ||| | |||||  ||||||||||||||||||| ||||| |  ||| |||| |||||| |||||||||| | ||||||    
T  11377621 tacaattttttgtttccaacattaaattcaagtttaaaaaaactaaaacacaacaaattttcaataatgtttcgaacaatattttaaattttacccaaca 11377522  T
Q  600 a 600  Q
    |    
T  11377521 a 11377521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 571
Target Start/End: Original strand, 11678021 - 11678178
Alignment:
Q  420 tttggttcggttgacttttaaaataaattccaaaccaaa--------gcggtttgaattggatcggttgatgcgggttttttcgatgcaat-acaatctt 510  Q
    ||||||||||||||||||||||||||| ||| |||||||        |||||||||||||||||||||| || || |||||   || |||| |   | ||    
T  11678021 tttggttcggttgacttttaaaataaaatccgaaccaaacaactattgcggtttgaattggatcggttggtgtggtttttt---atacaataattttttt 11678117  T
Q  511 ttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatattt 571  Q
    ||||||||||||| ||||| || ||||||| |||||| | |||||||||| | ||||||||    
T  11678118 ttgtttccaacattaaaatcaaattaaaaagctaaaaaagaacatattttcaacaatattt 11678178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 571
Target Start/End: Original strand, 11695499 - 11695656
Alignment:
Q  420 tttggttcggttgacttttaaaataaattccaaaccaaa--------gcggtttgaattggatcggttgatgcgggttttttcgatgcaat-acaatctt 510  Q
    ||||||||||||||||||||||||||| ||| |||||||        |||||||||||||||||||||| || || |||||   || |||| |   | ||    
T  11695499 tttggttcggttgacttttaaaataaaatccgaaccaaacaactattgcggtttgaattggatcggttggtgtggtttttt---atacaataattttttt 11695595  T
Q  511 ttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatattt 571  Q
    ||||||||||||| ||||| || ||||||| |||||| | |||||||||| | ||||||||    
T  11695596 ttgtttccaacattaaaatcaaattaaaaagctaaaaaagaacatattttcaacaatattt 11695656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 442
Target Start/End: Complemental strand, 42785769 - 42785665
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  |||||||||||||| |||||||||   | |||||||||||| ||  ||||||||||| |||  | ||||||||||||| |||| |||    
T  42785769 taggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaatcgtgagataaaaaaggatgcggtttggtttggttcgcttgatttt 42785670  T
Q  438 taaaa 442  Q
    |||||    
T  42785669 taaaa 42785665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 469 - 560
Target Start/End: Complemental strand, 31720077 - 31719987
Alignment:
Q  469 ttggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    |||||||||||| ||||| ||| ||| |  ||||||||| ||||||||||||||| |||||  |||||||||  ||||||| ||||||||||    
T  31720077 ttggatcggttggtgcggttttcttcaaa-caatacaattttttgtttccaacattaaaatcgagttaaaaaggtaaaacaaaacatatttt 31719987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 534 - 599
Target Start/End: Complemental strand, 21480741 - 21480676
Alignment:
Q  534 ttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||||| |||||||||| |||||||  | |||| ||| |||||||||||||||||||||| ||||    
T  21480741 ttaaaaagctaaaacacaccatatttacatcaatgttttcaacaatgttttaaatttcatcaaaca 21480676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 354 - 442
Target Start/End: Original strand, 44035264 - 44035353
Alignment:
Q  354 gcggtttggtttgattttgaggccataagtcatccaaaccgcaagat-aaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||| | |||||||   | |||||||||||||||||| || ||||||| |||  | |||||||||||||||||| ||||||||    
T  44035264 gcggtttggttcggttttgagcataaaagtcatccaaaccgcaaaataaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 44035353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 36413735 - 36413676
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  36413735 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 36413676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 442
Target Start/End: Complemental strand, 19937266 - 19937161
Alignment:
Q  337 attaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgact 435  Q
    |||||||||||||  |||||||||||||| |  ||||||   | |||||||||||||||| ||||||||||  |||  | ||||||||||||| |||| |    
T  19937266 attaggggtgttcgcggtgcggtttggttaggatttgagcataaaagtcatccaaaccgcgagataaaaaaacatg-ggtttggtttggttcgattgatt 19937168  T
Q  436 tttaaaa 442  Q
    |||||||    
T  19937167 tttaaaa 19937161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 599
Target Start/End: Complemental strand, 30759593 - 30759507
Alignment:
Q  513 gtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||||||||| |||| | |||||||||  || ||||||||| ||||  | |||| ||| | ||||| |||||||||||||||||||    
T  30759593 gtttccaacattaaaactgagttaaaaagttataacacaacacatttccaacaatgttttcgacaatattttaaatttcatccaaca 30759507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 560
Target Start/End: Original strand, 22014079 - 22014140
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    ||||| ||| ||| ||||||||||| |||||  ||||||||| |||||||||| ||||||||    
T  22014079 caatataatttttcgtttccaacattaaaatcgagttaaaaagctaaaacacagcatatttt 22014140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 533 - 590
Target Start/End: Complemental strand, 44139019 - 44138962
Alignment:
Q  533 gttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaattt 590  Q
    |||||||| |||||||||||| |||||| | |||| ||| ||| ||||||||||||||    
T  44139019 gttaaaaagctaaaacacaacttattttcatcaatgttttcaataatgttttaaattt 44138962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 6e-48; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 352 - 600
Target Start/End: Complemental strand, 17144855 - 17144594
Alignment:
Q  352 gtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc- 450  Q
    ||||||||||||| | ||||||||| | |||||||||||||||||||||||||| |||||  | ||||||||||||||||||||||||||||| | |||     
T  17144855 gtgcggtttggttcggttttgaggctaaaagtcatccaaaccgcaagataaaaa-gtatgcggattggtttggttcggttgacttttaaaatagaatccg 17144757  T
Q  451 --------------aaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagtta 536  Q
                  ||||||| | ||||||  |||||||||||||||||| ||||||  ||  |||||||| |||| ||| |||||||||||| ||||||    
T  17144756 aagcaaaccaagccaaaccaatgtggtttgggttggatcggttgatgcggtttttttttata-aatacaattttttcttttcaacatcaaaatcaagtta 17144658  T
Q  537 aaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaacaa 600  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||    
T  17144657 aaaaactaaaacacaacatattttcagccatgtttccaacaatgttttaaatttcattcaacaa 17144594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 351 - 561
Target Start/End: Complemental strand, 38652115 - 38651901
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||||||||||||||| |||||| |  | ||||||||| || |||||||||||||| ||||  | |||||||||||||||||||||| |||||||  |||    
T  38652115 ggtgcggtttggtttggttttgaaggtaaaagtcatccgaatcgcaagataaaaaa-tatgcggtttggtttggttcggttgactttaaaaataatatcc 38652017  T
Q  451 aaaccaaa-----gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaa 545  Q
    ||||||||     ||||||||  |||||||||||||||||| ||||| |||  || ||   | ||||||||||||| | ||||| | ||||||||  |||    
T  38652016 aaaccaaactaatgcggtttgggttggatcggttgatgcggttttttccgagacattaattttttttgtttccaacgttaaaatcaggttaaaaagttaa 38651917  T
Q  546 aacacaacatattttt 561  Q
    ||||||||||||||||    
T  38651916 aacacaacatattttt 38651901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 567
Target Start/End: Complemental strand, 55467769 - 55467547
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattc- 449  Q
    |||||||||||||| | ||||||||| | ||||||||| ||| |||||||||| |||||||  | ||||||||||||||||||||||||||||||| ||     
T  55467769 ggtgcggtttggttcggttttgaggctaaaagtcatccgaactgcaagataaataagtatgcggtttggtttggttcggttgacttttaaaataaaatcc 55467670  T
Q  450 ---------caaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaa 540  Q
             |||||||| |||||||| |||||||| |||| ||||| |||||| ||  |||||   | ||||||||||||||| ||||| || |||||||    
T  55467669 gaaccaaatcaaaccaatgcggtttggattggatcagttggtgcggtttttttaga--caatatttttttttgtttccaacattaaaatcaaattaaaaa 55467572  T
Q  541 actaaaacacaacatatttttagcaat 567  Q
      ||||||||  |||||||| ||||||    
T  55467571 gataaaacac--catattttcagcaat 55467547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 351 - 458
Target Start/End: Original strand, 54121976 - 54122083
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    ||||| ||||| || ||||||||||  | ||||||||| ||||| ||||||||||||||||  | ||||||||||||||||||||||||||||||| |||    
T  54121976 ggtgcagtttgattcgattttgaggttaaaagtcatccgaaccgtaagataaaaaagtatgcggtttggtttggttcggttgacttttaaaataaaatcc 54122075  T
Q  451 aaaccaaa 458  Q
     |||||||    
T  54122076 gaaccaaa 54122083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 486 - 599
Target Start/End: Original strand, 55129823 - 55129936
Alignment:
Q  486 ggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgtttta 585  Q
    |||||| ||||  ||||||||| | |||||||  |||| |||||||||||||||| ||||||||||||||||||| |  ||| ||| |||||||||||||    
T  55129823 ggttttgtcgagacaatacaatttgttgtttctgacattaaaattaagttaaaaatctaaaacacaacatattttcattaatgttttcaacaatgtttta 55129922  T
Q  586 aatttcatccaaca 599  Q
    || || ||||||||    
T  55129923 aaatttatccaaca 55129936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 351 - 593
Target Start/End: Complemental strand, 2832526 - 2832265
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggtt-----cggttgacttttaaaataa 445  Q
    |||| ||||||||||| ||||||||| | ||||||||| |||| ||||||||||||| |||  | |||||||||||     |||||||||||||||||||    
T  2832526 ggtgtggtttggtttggttttgaggctaaaagtcatccgaaccacaagataaaaaagcatgcggtttggtttggtttggttcggttgacttttaaaataa 2832427  T
Q  446 attcc---------------aaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaatt 530  Q
    | |||               ||||||| ||||||||  || ||||||||| |||||||||||| ||  ||||||||| || ||||| |||||| |||||     
T  2832426 aatccgaatcaaaccaaatcaaaccaatgcggtttgggtttgatcggttggtgcgggtttttt-gagacaatacaattttatgttttcaacattaaaatc 2832328  T
Q  531 aagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcat 593  Q
     |||| ||||  ||||||||||| |||||  |  ||| |||||||||||||||| ||||||||    
T  2832327 gagtttaaaaggtaaaacacaacgtatttccattaatgtttccaacaatgtttttaatttcat 2832265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 469 - 591
Target Start/End: Complemental strand, 22473085 - 22472960
Alignment:
Q  469 ttggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaac---taaaacacaacatatttttagca 565  Q
    |||||||||||| ||| | |||| ||||  ||||||||| |||||||| ||| |||||||| ||||||| |||    |||||||||||||||||| | ||    
T  22473085 ttggatcggttggtgcagtttttctcgagacaatacaattttttgttttcaatatcaaaatcaagttaataaaaatttaaaacacaacatattttcaaca 22472986  T
Q  566 atatttccaacaatgttttaaatttc 591  Q
    ||  ||||||||||||||||||||||    
T  22472985 atgcttccaacaatgttttaaatttc 22472960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 355 - 567
Target Start/End: Original strand, 52631997 - 52632214
Alignment:
Q  355 cggtttggtttgattttgaggccataagtcatccaaaccg-caagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaa 453  Q
    |||||||||| | |||| |||| | ||||||||||||| | ||||||||||||  | |  | |||||||| ||||||| |||||||||||| | ||| ||    
T  52631997 cggtttggttcgtttttaaggctaaaagtcatccaaacagacaagataaaaaaacacgcggtttggtttgattcggttaacttttaaaatacaatccgaa 52632096  T
Q  454 ccaaa-----gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    |||||     || |||||  |||||| ||||| ||||| ||||||| |  ||| | ||| ||||||||||||||| |||||  |||||||||  |||| |    
T  52632097 ccaaaccaatgcagtttgggttggattggttggtgcgg-ttttttcaagacaacataattttttgtttccaacattaaaatcgagttaaaaatgtaaagc 52632195  T
Q  549 acaacatatttttagcaat 567  Q
    |||||||||||||||||||    
T  52632196 acaacatatttttagcaat 52632214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 446
Target Start/End: Original strand, 26758208 - 26758274
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||||||| |||||||||||||| ||||||   | |||||||||||||||||||||||||||||||    
T  26758208 aagtcatccgaaccgcaagataaataagtatacggtttggtttggttcggttgacttttaaaataaa 26758274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 458
Target Start/End: Original strand, 45629177 - 45629255
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaa 458  Q
    ||||||||| |||||||||||||| ||||||| |  |||||||| || ||||||||||||||||||| ||| |||||||    
T  45629177 aagtcatccgaaccgcaagataaataagtatgcaatttggtttgatttggttgacttttaaaataaactccgaaccaaa 45629255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 493
Target Start/End: Complemental strand, 45915299 - 45915184
Alignment:
Q  382 gtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataa----attccaaaccaaagcggtttgaattggatcgg 477  Q
    ||||| ||||||||||||| || |||||||  | |||||||||||||||||||||||||||  |    |  ||| ||||| |||||||||||||||||||    
T  45915299 gtcattcaaaccgcaagatgaataagtatgcggtttggtttggttcggttgacttttaaaaccaaaccaaaccagaccaatgcggtttgaattggatcgg 45915200  T
Q  478 ttgatgcgggtttttt 493  Q
    ||| ||||| ||||||    
T  45915199 ttggtgcggttttttt 45915184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 442
Target Start/End: Original strand, 43030358 - 43030463
Alignment:
Q  338 ttaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgactt 436  Q
    ||||||||||||  ||||||||||| |||  |||||||   | ||||||| | || ||||||||||||||||||| || |||||||||||||||||| ||    
T  43030358 ttaggggtgttcgcggtgcggtttgatttagttttgagcataaaagtcatgcgaatcgcaagataaaaaagtatgcagtttggtttggttcggttgattt 43030457  T
Q  437 ttaaaa 442  Q
    ||||||    
T  43030458 ttaaaa 43030463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 449 - 561
Target Start/End: Original strand, 4554754 - 4554865
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    |||||| || ||||||||| |||||||||||||||||| ||||||  |  | ||| | | |||||||| |||||| ||||||| ||||||||  ||||||    
T  4554754 ccaaactaatgcggtttgagttggatcggttgatgcggtttttttt-agacgataaatttttttgtttgcaacattaaaattaggttaaaaagttaaaac 4554852  T
Q  549 acaacatattttt 561  Q
    |||||||||||||    
T  4554853 acaacatattttt 4554865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 20846454 - 20846533
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagta--tgaaggttggtttggttcggttgacttttaaaataaattccaaaccaa 457  Q
    ||||||||| ||||||||||||||||| ||  ||    ||||||||||||||||||||||||||||||| ||||||||||    
T  20846454 aagtcatccgaaccgcaagataaaaaaatacatgcgctttggtttggttcggttgacttttaaaataaaatccaaaccaa 20846533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 501 - 560
Target Start/End: Complemental strand, 8557921 - 8557862
Alignment:
Q  501 atacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    ||||||| ||||||||||||||| ||||| |||||||||| || ||||||||||||||||    
T  8557921 atacaattttttgtttccaacattaaaatcaagttaaaaagcttaaacacaacatatttt 8557862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 458
Target Start/End: Complemental strand, 46253563 - 46253452
Alignment:
Q  347 ttctggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||| ||||||||| |||||||   | ||| ||||  |||||||| ||||| ||||||     || |||||||||||||| |||||||||||||    
T  46253563 ttctggtgcgctttggtttggttttgagaataaaagacatctgaaccgcaaaataaataagtattcgattttgtttggttcggttggcttttaaaataaa 46253464  T
Q  447 ttccaaaccaaa 458  Q
    ||||||||||||    
T  46253463 ttccaaaccaaa 46253452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 6004485 - 6004423
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||||| ||||||||||| |||  | |||||||||||||||||| ||||||||    
T  6004485 aagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaa 6004423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 356 - 593
Target Start/End: Original strand, 44661881 - 44662125
Alignment:
Q  356 ggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaacc 455  Q
    ||||| ||| ||||||||| | |||||| |||| ||| ||| ||||||||| |||| || |||||||| |||| ||||| || |||||||  |   ||||    
T  44661881 ggtttagttcgattttgagactataagttatccgaactgcatgataaaaaaatatgtagtttggtttgtttcgtttgacattcaaaataatatatgaacc 44661980  T
Q  456 aaa-------gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    |||       | ||||||  |||||| ||| | ||||| ||||| |||  ||||| | | |||||||| |||||| ||||  ||||||||||  ||| ||    
T  44661981 aaacaaatgtgtggtttgtgttggattggtcggtgcggttttttccgagtcaataaatttttttgttttcaacattaaaagaaagttaaaaagttaatac 44662080  T
Q  549 acaacatatttttagcaatatttccaacaatgttttaaatttcat 593  Q
    ||| |||||||| |||||| |||||||||||  ||||||||||||    
T  44662081 acagcatattttcagcaatgtttccaacaataatttaaatttcat 44662125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 509 - 567
Target Start/End: Original strand, 48167387 - 48167445
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaat 567  Q
    ||||||||||||||| ||||| || ||||||| ||||||||||||||||||||| ||||    
T  48167387 ttttgtttccaacattaaaatgaaattaaaaatctaaaacacaacatatttttaacaat 48167445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 450 - 559
Target Start/End: Original strand, 20846540 - 20846646
Alignment:
Q  450 caaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaaca 549  Q
    |||||||| ||||||||  |||||||||||| ||||| ||||||||| | | |||||| |||| ||| |||||| ||||| | ||||||||| |||||||    
T  20846540 caaaccaatgcggtttgggttggatcggttggtgcgg-ttttttcga-gaattacaattttttattttcaacattaaaatga-gttaaaaaagtaaaaca 20846636  T
Q  550 caacatattt 559  Q
    ||||||||||    
T  20846637 caacatattt 20846646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 560
Target Start/End: Original strand, 25465914 - 25465975
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    ||||||||| |||||||| |||||| ||||| |||||||||  |||||||||||||||||||    
T  25465914 caatacaattttttgttttcaacattaaaatcaagttaaaaggctaaaacacaacatatttt 25465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 567
Target Start/End: Original strand, 26758352 - 26758405
Alignment:
Q  514 tttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaat 567  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||| ||||||    
T  26758352 tttccaacattaaaattaaattaaaaagctaaaacacaacatattttcagcaat 26758405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 567
Target Start/End: Original strand, 4280300 - 4280461
Alignment:
Q  416 ttggtttggttcggttgacttttaaaataaattccaaaccaaa-----gcggtttgaattggatcggttgatgcgggttttttc--gatgcaatacaatc 508  Q
    ||||||||| ||||||||||||||||||||| | ||||| |||     ||||| |   |||||||| ||||||||  ||||||   || ||||||||||     
T  4280300 ttggtttggctcggttgacttttaaaataaaattcaaacaaaaccaacgcggtctaggttggatcgattgatgcgtttttttttttgaggcaatacaatt 4280399  T
Q  509 ttttgtttccaacatcaaaattaagtt---aaaaaactaaaacacaacatatttttagcaat 567  Q
    |||||||| ||| || ||||| |||||   ||||||||||||||| ||||||||| ||||||    
T  4280400 ttttgttttcaatattaaaatcaagttaaaaaaaaactaaaacactacatattttcagcaat 4280461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 539
Target Start/End: Complemental strand, 5640744 - 5640658
Alignment:
Q  452 aaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaa 539  Q
    |||||| ||||||||  |||||||||| | ||||| |||||||||   |||||||| ||||||||||||||| ||||| |||||||||    
T  5640744 aaccaaggcggtttgggttggatcggtcggtgcgg-ttttttcgagagaatacaattttttgtttccaacattaaaatcaagttaaaa 5640658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 539
Target Start/End: Complemental strand, 5681516 - 5681430
Alignment:
Q  452 aaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaa 539  Q
    |||||| ||||||||  |||||||||| | ||||| |||||||||   |||||||| ||||||||||||||| ||||| |||||||||    
T  5681516 aaccaatgcggtttgggttggatcggtcggtgcgg-ttttttcgagagaatacaattttttgtttccaacattaaaatcaagttaaaa 5681430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 588
Target Start/End: Original strand, 5695601 - 5695739
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    |||||| |||||| ||||  |||||||||||| ||||| |||||||||  ||||  ||| || |||| ||||||| |||||  ||||||||||||| |      
T  5695601 ccaaactaaagcgatttgggttggatcggttgttgcgg-ttttttcgagacaatttaattttgtgttaccaacattaaaatcgagttaaaaaactatagg 5695699  T
Q  549 acaacatatttttagcaatatttccaacaatgttttaaat 588  Q
    | || ||||||| | |||| ||||| ||||||||||||||    
T  5695700 aaaatatattttcaacaatttttccgacaatgttttaaat 5695739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 21586970 - 21586879
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||| |||||||| | |||||||   | |||||||||||||||| ||||||||||| ||| || |||||||| ||| ||||| ||||||||    
T  21586970 ggtgcagtttggttcggttttgagcttaaaagtcatccaaaccgcgagataaaaaagcatgcagtttggtttgattcagttgatttttaaaa 21586879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 338 - 444
Target Start/End: Complemental strand, 26292097 - 26291990
Alignment:
Q  338 ttaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgactt 436  Q
    ||||||||||||  |||||||||||||| |||||| |    | || |||||||||||||||||||||||| | ||  | ||| |||||||||||||| ||    
T  26292097 ttaggggtgttcgcggtgcggtttggttcgattttaaaattaaaaatcatccaaaccgcaagataaaaaattgtgcggtttgctttggttcggttgattt 26291998  T
Q  437 ttaaaata 444  Q
    ||||||||    
T  26291997 ttaaaata 26291990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 509 - 559
Target Start/End: Original strand, 38680930 - 38680980
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattt 559  Q
    |||||||||||| || ||||||||||||||||  |||||||||||||||||    
T  38680930 ttttgtttccaatattaaaattaagttaaaaagttaaaacacaacatattt 38680980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 458
Target Start/End: Complemental strand, 42363351 - 42363245
Alignment:
Q  352 gtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcca 451  Q
    ||||||||||||| | ||||||||  | |||| ||   |||||||||||||||||  |||  | |||||||||||||||||||||| |||| ||| |||     
T  42363351 gtgcggtttggttcggttttgagggtaaaagtaatttgaaccgcaagataaaaaatcatgcggtttggtttggttcggttgactttaaaaacaaaatccg 42363252  T
Q  452 aaccaaa 458  Q
    |||||||    
T  42363251 aaccaaa 42363245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 509 - 571
Target Start/End: Original strand, 45629312 - 45629374
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatattt 571  Q
    ||||||||||||||| ||||| || |||||||  ||||||| |||||||||| ||||||||||    
T  45629312 ttttgtttccaacattaaaatcaaattaaaaaggtaaaacataacatattttcagcaatattt 45629374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 458
Target Start/End: Complemental strand, 8558082 - 8557978
Alignment:
Q  354 gcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaa 453  Q
    ||||||||||||| ||||||||  | |||||| || ||| ||||||||||||||  ||  | |||||| |||| | |||||||| |||||||| ||| ||    
T  8558082 gcggtttggtttggttttgagggtaaaagtcacccgaactgcaagataaaaaagcttgcggtttggttcggtttgattgactttaaaaataaaatccgaa 8557983  T
Q  454 ccaaa 458  Q
    |||||    
T  8557982 ccaaa 8557978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 27054073 - 27054137
Alignment:
Q  394 gcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaa 458  Q
    |||||||||| ||||||| |  ||||||||||| |||||| |||||||||||| | |||||||||    
T  27054073 gcaagataaataagtatgcattttggtttggtttggttgaattttaaaataaaattcaaaccaaa 27054137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 443
Target Start/End: Original strand, 51191645 - 51191752
Alignment:
Q  338 ttaggggtgttc--tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgact 435  Q
    ||||||||||||  || ||||||||||||  |||||||||  | |||| ||   ||||||||||||||||| ||||  | |||||||||||||||||  |    
T  51191645 ttaggggtgttcgttgatgcggtttggttctattttgaggttaaaagttattagaaccgcaagataaaaaaatatgcggtttggtttggttcggttggat 51191744  T
Q  436 tttaaaat 443  Q
    ||||||||    
T  51191745 tttaaaat 51191752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 4669742 - 4669683
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  4669742 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 4669683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 539
Target Start/End: Complemental strand, 5672019 - 5671933
Alignment:
Q  452 aaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaa 539  Q
    |||||| ||||||||  || ||||||| | ||||| |||||||||   |||||||| ||||||||||||||| ||||| |||||||||    
T  5672019 aaccaatgcggtttgggttagatcggtcggtgcgg-ttttttcgagagaatacaattttttgtttccaacattaaaatcaagttaaaa 5671933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 446
Target Start/End: Complemental strand, 10481772 - 10481677
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||| |||||||| | ||||||||  | |||||||   |||| |||||||||||   | | || |||||||||||||||||||||||||||||||    
T  10481772 ggtgcagtttggttcggttttgaggataaaagtcattggaaccacaagataaaaagacacgcagtttggtttggttcggttgacttttaaaataaa 10481677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 458
Target Start/End: Complemental strand, 22257626 - 22257519
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    ||||| || ||||| | ||||||| | | ||||||||| |||||| ||||||| |||||||  | ||| ||| |||| |||||||||||||||||  |||    
T  22257626 ggtgctgtgtggttcggttttgagactaaaagtcatccgaaccgcgagataaataagtatgcggtttgatttagttcagttgacttttaaaataatatcc 22257527  T
Q  451 aaaccaaa 458  Q
     |||||||    
T  22257526 gaaccaaa 22257519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 446
Target Start/End: Complemental strand, 22473186 - 22473123
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||||||| ||||||||| ||||    ||||||||||||| |||||||||| ||||||    
T  22473186 tcatccaaaccgcatgataaaaaattatgtgatttggtttggttcgattgacttttagaataaa 22473123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 446
Target Start/End: Complemental strand, 25919348 - 25919285
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||| ||| |||||||||||||||||||   ||| |||||||| ||||| ||||||||||||    
T  25919348 tcatccgaactgcaagataaaaaagtatgagttttgatttggttctgttgagttttaaaataaa 25919285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 32880256 - 32880347
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||| |  ||||||   | ||||| |||||||||| ||||||||||| |||  | ||| |||||||||||||| ||||||||    
T  32880256 ggtgcggtttggttcggctttgagcataaaagtcctccaaaccgcgagataaaaaagcatgtggtttgatttggttcggttgatttttaaaa 32880347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 37044876 - 37044931
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaa 406  Q
    |||||||||||||| | |||||||   | |||||||||||||||||||||||||||    
T  37044876 ggtgcggtttggttcggttttgagagaaaaagtcatccaaaccgcaagataaaaaa 37044931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 560
Target Start/End: Original strand, 37045396 - 37045483
Alignment:
Q  473 atcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    |||||||| ||||| ||||||||   | |||| || ||||||||||||||| ||||| ||| |||||| || |||||||| |||||||    
T  37045396 atcggttggtgcggtttttttcgtgacgatacgattttttgtttccaacattaaaatcaagataaaaagctgaaacacaatatatttt 37045483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 567
Target Start/End: Complemental strand, 42363237 - 42363123
Alignment:
Q  452 aaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacaca 551  Q
    |||||| ||||||||  |||||||| ||  ||||| ||||| |||  | ||| ||| ||||||||||||||| |||||||||||||||| |  |||  ||    
T  42363237 aaccaatgcggtttggtttggatcgattagtgcggattttt-cgagacgatataattttttgtttccaacattaaaattaagttaaaaagccgaaaagca 42363139  T
Q  552 acatatttttagcaat 567  Q
    |||||||||| |||||    
T  42363138 acatatttttcgcaat 42363123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 50562697 - 50562606
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||| |||||| ||   | |||||||| ||||  | ||||||||||| |||  | |||||||||||||||||| ||||||||    
T  50562697 ggtgcggtttggttcgattttaagcataaaagtcatctaaactacgagataaaaaagcatgtggtttggtttggttcggttgatttttaaaa 50562606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 51149752 - 51149693
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  51149752 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 51149693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 516
Target Start/End: Complemental strand, 10481658 - 10481592
Alignment:
Q  450 caaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgttt 516  Q
    |||||||| | ||||||| |||||||||||||||||| |||| || |  ||||||||| ||||||||    
T  10481658 caaaccaatgtggtttgagttggatcggttgatgcggtttttctcaacacaatacaattttttgttt 10481592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 446
Target Start/End: Original strand, 40483863 - 40483973
Alignment:
Q  337 attaggggtgttc-tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgact 435  Q
    ||||||||||||| | |||||||||| || |||||| | |  | || |||| | |||| ||||||||||| | |||  | |||||||||||| |||||||    
T  40483863 attaggggtgttcgttgtgcggtttgattcgattttaaagttaaaaatcattcgaaccacaagataaaaatgcatgcggtttggtttggttcagttgact 40483962  T
Q  436 tttaaaataaa 446  Q
    |||||||||||    
T  40483963 tttaaaataaa 40483973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 567
Target Start/End: Original strand, 44651082 - 44651140
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaat 567  Q
    ||||||||||||||| ||||| ||||||||||  | ||||||| |||||||| ||||||    
T  44651082 ttttgtttccaacattaaaatcaagttaaaaagttgaaacacagcatattttcagcaat 44651140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 449 - 567
Target Start/End: Complemental strand, 50579022 - 50578904
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    ||||||||| | ||||||  |||||| ||||| |||| | ||||||||  | || |||| ||| ||||||||||| ||||| |||| |||||  | ||||    
T  50579022 ccaaaccaatgtggtttgggttggattggttggtgcgagctttttcgagacgattcaatttttagtttccaacattaaaatcaagtaaaaaagattaaac 50578923  T
Q  549 acaacatatttttagcaat 567  Q
    ||||| |||||| ||||||    
T  50578922 acaacttattttcagcaat 50578904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Complemental strand, 25919222 - 25919165
Alignment:
Q  503 acaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    ||||| |||| ||||||||||  |||| || ||||||| |||||||||||||||||||    
T  25919222 acaatattttttttccaacatttaaatcaaattaaaaagctaaaacacaacatatttt 25919165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 350 - 446
Target Start/End: Complemental strand, 2566458 - 2566362
Alignment:
Q  350 tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||||| ||||||| |||||||| || | ||||||||  |||| ||||||||| || ||||  | |||||| |||||| || | ||||||||||||    
T  2566458 tggtgcgctttggttcgattttgatgctaaaagtcatctgaaccacaagataaagaaatatgtggtttggttcggttcgattaagttttaaaataaa 2566362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 3e-43; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 380 - 589
Target Start/End: Complemental strand, 35980366 - 35980157
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaagcggtttgaattggatcggtt 479  Q
    ||||||||| ||||||||| |||||||| |||  | ||||||| ||| ||||||||||||||||||| |||||||||| | ||||||  || ||||||||    
T  35980366 aagtcatccgaaccgcaaggtaaaaaagcatgtggtttggttttgtttggttgacttttaaaataaaatccaaaccaatgtggtttggtttagatcggtt 35980267  T
Q  480 gatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaat 579  Q
    | ||||| |||||||||  ||||||||| ||||||||||||||| ||||| ||||||||||  ||||| || ||||||||| |||||| ||| | |||||    
T  35980266 ggtgcggtttttttcgagacaatacaattttttgtttccaacattaaaatcaagttaaaaaggtaaaaaacgacatattttcagcaatgttttcgacaat 35980167  T
Q  580 gttttaaatt 589  Q
    ||||| ||||    
T  35980166 gtttttaatt 35980157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 351 - 599
Target Start/End: Original strand, 8268612 - 8268854
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaa-aaagtatgaaggttggtttggttcggttgacttttaaaataaattc 449  Q
    |||||||||||||| | ||||||||| | ||||||||  |||||||||||||| ||| ||||  ||||||||||||| ||||||||||||||       |    
T  8268612 ggtgcggtttggttcggttttgaggctaaaagtcatctgaaccgcaagataaacaaaatatgcgggttggtttggtttggttgacttttaaa-------c 8268704  T
Q  450 caaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaaca 549  Q
    ||||| ||  |||||||  |||||||||||| ||||| || || | |  |||| |||| |||||||| |||||| ||||| |||||||||| ||||||||    
T  8268705 caaactaatacggtttgggttggatcggttggtgcggtttcttaccagacaatgcaattttttgtttacaacattaaaatcaagttaaaaagctaaaaca 8268804  T
Q  550 caacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||||||||  || ||| ||||| |||||||||| ||||||||||||||    
T  8268805 caacatatttccagtaatgtttccgacaatgtttttaatttcatccaaca 8268854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 350 - 567
Target Start/End: Original strand, 34914088 - 34914308
Alignment:
Q  350 tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt- 448  Q
    |||||| |||||||| ||||||||||  | ||||||||||||| || | ||||||||||||| || |||||||| || ||||||||||||||||||| |     
T  34914088 tggtgcagtttggttcgattttgaggtgaaaagtcatccaaactgcgaaataaaaaagtatgcagtttggtttgctttggttgacttttaaaataaaatt 34914187  T
Q  449 ----ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaacta 544  Q
        ||||||||| | |||||| ||||||||||||| ||||| |||||| ||  |||||   | |||||||||||| || ||||| || ||||||| |||    
T  34914188 cgaaccaaaccaatgtggtttggattggatcggttgttgcggtttttttaga--caatatttttttttgtttccaatattaaaatcaaattaaaaaccta 34914285  T
Q  545 aaacacaacatatttttagcaat 567  Q
    |||||||||||||||| ||||||    
T  34914286 aaacacaacatattttcagcaat 34914308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 351 - 599
Target Start/End: Complemental strand, 10847649 - 10847401
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattc- 449  Q
    |||||| ||||||| ||||||||||  | ||||||||  |||| ||||||||||||  |||     ||||||||||||||||||||| |||||||| ||     
T  10847649 ggtgcgatttggttagattttgaggttaaaagtcatctgaacctcaagataaaaaaacatg-----tggtttggttcggttgactttgaaaataaaatca 10847555  T
Q  450 ----caaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaa 545  Q
        |||||||| | ||||||  |||||| ||||||||| | ||| | | |  ||||||||| ||||||||||||||| ||||  || |||||||  |||    
T  10847554 gaaccaaaccaatgtggtttgggttggattggttgatgcagttttctgctagacaatacaattttttgtttccaacattaaaacaaaattaaaaagttaa 10847455  T
Q  546 aacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||||||||||||| | |||| ||||| |||||||||| |||||||| |||||    
T  10847454 aacacaacatattttcaacaatgtttccgacaatgtttttaatttcattcaaca 10847401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 358 - 586
Target Start/End: Complemental strand, 16537957 - 16537722
Alignment:
Q  358 tttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaa 457  Q
    ||||||| |||||||| |  | |||||||| ||||||||||||||||||  |||  | ||| ||||||| |||| |||||||||||||| ||| ||||||    
T  16537957 tttggttcgattttgaaggtaaaagtcatctaaaccgcaagataaaaaaacatgcggtttgatttggtttggttcacttttaaaataaaatccgaaccaa 16537858  T
Q  458 a-----gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatctttt--gtttccaacatcaaaattaagttaaaaaactaaaacac 550  Q
    |     || |||||  ||||||| |||||||||| |||||||||  ||||||||| ||||  |||||||||   |||   |||||||||| |||||||||    
T  16537857 accaatgcagtttgggttggatctgttgatgcggtttttttcgagacaatacaattttttttgtttccaacgctaaagccaagttaaaaacctaaaacac 16537758  T
Q  551 aacatatttttagcaatatttccaacaatgttttaa 586  Q
    |||||||||  |||||| ||||||||||| ||||||    
T  16537757 aacatatttcaagcaatgtttccaacaatattttaa 16537722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 351 - 491
Target Start/End: Complemental strand, 35980514 - 35980374
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||||||||||||| | ||||||||| | ||||||||| ||||||||| |||||||| |||  | ||||||| ||||| ||||||||||||||||| |||    
T  35980514 ggtgcggtttggttcggttttgaggctaaaagtcatccgaaccgcaaggtaaaaaagcatgtggtttggttttgttcgattgacttttaaaataaaatcc 35980415  T
Q  451 aaaccaaagcggtttgaattggatcggttgatgcgggtttt 491  Q
    ||||||| ||||||||  || ||||||||| ||||| ||||    
T  35980414 aaaccaatgcggtttggtttagatcggttggtgcggttttt 35980374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 359 - 560
Target Start/End: Complemental strand, 32910488 - 32910277
Alignment:
Q  359 ttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaa 458  Q
    |||||| | ||||||||  | ||||||||||||| |||||||||||||  ||| || |||||||||||||||||||||| |||||| | ||  |||||||    
T  32910488 ttggttcggttttgaggataaaagtcatccaaactgcaagataaaaaaacatgcagtttggtttggttcggttgactttaaaaatagaatctgaaccaaa 32910389  T
Q  459 ----------gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
              ||||||||  |||||||||||| || |  |||||||||  | ||||||| ||||||||||||||| ||||| ||||||||||  | ||||    
T  32910388 acaaacaaatgcggtttgtgttggatcggttggtgtgatttttttcgagacgatacaattttttgtttccaacattaaaatcaagttaaaaagtttaaac 32910289  T
Q  549 acaacatatttt 560  Q
    ||||||||||||    
T  32910288 acaacatatttt 32910277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 449 - 589
Target Start/End: Complemental strand, 35992620 - 35992480
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    |||||| || ||||||||  |||||||||||| ||||| |||||||||  ||||||||| ||||| ||||||||| ||||| ||||||||||  ||||||    
T  35992620 ccaaactaatgcggtttggtttggatcggttggtgcggtttttttcgagacaatacaattttttgcttccaacattaaaatcaagttaaaaaggtaaaac 35992521  T
Q  549 acaacatatttttagcaatatttccaacaatgttttaaatt 589  Q
    |  ||||||||| | |||| ||| | |||||||||| ||||    
T  35992520 aagacatattttcaacaatgttttcgacaatgtttttaatt 35992480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 352 - 567
Target Start/End: Original strand, 6248033 - 6248257
Alignment:
Q  352 gtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatg-----aaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||| |||||||||||| | | |||||||||||||||||||| ||| |||||||       | ||||||||||| |||||||||||||||||||    
T  6248033 gtgcggtttgatttgattttgagactaaaagtcatccaaaccgcaagaaaaataagtatgcggtttggtttggtttggtttggttgacttttaaaataaa 6248132  T
Q  447 tt-----ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaac-atcaaaattaagttaaaaa 540  Q
     |      |||||||| |||||||| ||||||| ||||||||||| |||||| ||  |||||   | || ||||||||||  | ||||| || |||||||    
T  6248133 atttgaatcaaaccaatgcggtttggattggataggttgatgcggtttttttaga--caatatttttttatgtttccaacgttaaaaatcaaattaaaaa 6248230  T
Q  541 actaaaacacaacatatttttagcaat 567  Q
     ||||||||||| ||||||| ||||||    
T  6248231 gctaaaacacaatatattttcagcaat 6248257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 503 - 590
Target Start/End: Complemental strand, 15880116 - 15880029
Alignment:
Q  503 acaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaattt 590  Q
    ||||| ||||||||||||||| ||||| ||||||||||  |||| ||||||||||||| |||||| |||| |||||||||||||||||    
T  15880116 acaattttttgtttccaacattaaaatcaagttaaaaaggtaaatcacaacatattttcagcaatgtttctaacaatgttttaaattt 15880029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 351 - 458
Target Start/End: Complemental strand, 27507618 - 27507511
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||||||||||||| | |||||||   | ||||||||| |||||||||||||| ||||||| |  ||||||| ||||||||||||||||||||||| |||    
T  27507618 ggtgcggtttggttcggttttgagaataaaagtcatccgaaccgcaagataaataagtatgcaatttggtttagttcggttgacttttaaaataaaatcc 27507519  T
Q  451 aaaccaaa 458  Q
    ||| ||||    
T  27507518 aaatcaaa 27507511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 339 - 444
Target Start/End: Complemental strand, 36203583 - 36203477
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  |||||| ||||||| | ||||||||  | |||||||||||||||||||||||||||| |||  | ||| ||||||||||||||||||    
T  36203583 taggggtgttcgcggtgcgatttggttcggttttgaggttaaaagtcatccaaaccgcaagataaaaaagcatgcggtttgatttggttcggttgacttt 36203484  T
Q  438 taaaata 444  Q
    |||||||    
T  36203483 taaaata 36203477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 462 - 567
Target Start/End: Original strand, 382138 - 382243
Alignment:
Q  462 gtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattttt 561  Q
    ||||| |||||| ||||||||| || |||||||||  |||| |||| ||||||||  ||||| ||||| ||||||||||||||||||||| | |||||||    
T  382138 gtttggattggaccggttgatgtggtttttttcgagacaatgcaattttttgttttaaacattaaaatcaagttaaaaaactaaaacacatcttattttt 382237  T
Q  562 agcaat 567  Q
    ||||||    
T  382238 agcaat 382243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 351 - 446
Target Start/End: Complemental strand, 2490155 - 2490060
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||| |||||||| ||||||||||| | |||| |||| |||||||||||||| |||||||    |||||||||||| ||||||||||||||||||    
T  2490155 ggtgcagtttggttcgattttgaggctaaaagttatccgaaccgcaagataaataagtatgcgatttggtttggttcagttgacttttaaaataaa 2490060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 351 - 458
Target Start/End: Original strand, 3935412 - 3935519
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||||||||||||| ||||||||| | | |||||||   ||||| |||||||| ||||||| ||  ||||||| |||||||||||||||||||||| |||    
T  3935412 ggtgcggtttggttcgattttgagactaaaagtcatatgaaccgtaagataaataagtatgcagtatggtttgattcggttgacttttaaaataaaatcc 3935511  T
Q  451 aaaccaaa 458  Q
     |||||||    
T  3935512 gaaccaaa 3935519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 500 - 599
Target Start/End: Complemental strand, 32938051 - 32937953
Alignment:
Q  500 aatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    |||||||| |||||||||| |||| ||||| |||||||||| ||||||||||||||||||| |||||| ||||  | | ||||||| |||||||||||||    
T  32938051 aatacaat-ttttgtttcctacattaaaatcaagttaaaaagctaaaacacaacatattttaagcaatgtttctgatagtgttttatatttcatccaaca 32937953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 449 - 557
Target Start/End: Complemental strand, 23475126 - 23475020
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    |||||| || |||||||| |||| |||||| | ||| | ||| ||||| |||||||||| ||||||||||||||| |||||||||||||||| ||||||     
T  23475126 ccaaactaatgcggtttggattgaatcggtgggtgcag-tttcttcgaggcaatacaattttttgtttccaacattaaaattaagttaaaaagctaaaa- 23475029  T
Q  549 acaacatat 557  Q
    |||||||||    
T  23475028 acaacatat 23475020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 442
Target Start/End: Complemental strand, 51252555 - 51252451
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  |||||||||||||| |||||||||   | |||||||||||||||| ||||||||||| |||  | ||||||||||| |||||| |||    
T  51252555 taggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtggtttggtttggttgggttgatttt 51252456  T
Q  438 taaaa 442  Q
    |||||    
T  51252455 taaaa 51252451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 458
Target Start/End: Original strand, 50471183 - 50471289
Alignment:
Q  352 gtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcca 451  Q
    |||||| || ||| |||||||| || | ||||||||| ||||| || |||||||||||||  | |||||||||||| ||||  |||||||||||| ||||    
T  50471183 gtgcgggtttgttcgattttgatgctaaaagtcatccgaaccgtaaaataaaaaagtatgcggtttggtttggttcagttgcattttaaaataaaatcca 50471282  T
Q  452 aaccaaa 458  Q
    |||||||    
T  50471283 aaccaaa 50471289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 442
Target Start/End: Complemental strand, 16529641 - 16529536
Alignment:
Q  338 ttaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgactt 436  Q
    ||||||||||||  |||||||||||||| | |||||||   | ||||||||||||| || ||||||||||| |||  | |||||||||||||||||| ||    
T  16529641 ttaggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgccgtttggtttggttcggttgattt 16529542  T
Q  437 ttaaaa 442  Q
    ||||||    
T  16529541 ttaaaa 16529536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 536
Target Start/End: Complemental strand, 50952092 - 50951967
Alignment:
Q  416 ttggtttggttcggttgacttttaaaataaattc-----caaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatctt 510  Q
    |||||||||||||||||||||||||||||||  |     |||||||  ||||||||| || ||||||||| ||||| ||||||| |   |||||||| ||    
T  50952092 ttggtttggttcggttgacttttaaaataaaacccgaatcaaaccattgcggtttgagttagatcggttggtgcggtttttttccacaaaatacaatttt 50951993  T
Q  511 ttgtttccaacatcaaaattaagtta 536  Q
    |||||| |||||| ||||| ||||||    
T  50951992 ttgttttcaacattaaaatcaagtta 50951967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 338 - 447
Target Start/End: Complemental strand, 25560137 - 25560030
Alignment:
Q  338 ttaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgactt 436  Q
    ||||||||||||  |||||| ||||||| ||||||||||  | ||||||| | ||||| ||||||||||||||||  | ||||   ||||||||||||||    
T  25560137 ttaggggtgttcgcggtgcgttttggttcgattttgaggttaaaagtcattcgaaccgtaagataaaaaagtatgcggtttgg---ggttcggttgactt 25560041  T
Q  437 ttaaaataaat 447  Q
    |||||||||||    
T  25560040 ttaaaataaat 25560030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 390 - 493
Target Start/End: Original strand, 52828817 - 52828924
Alignment:
Q  390 aaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt-----ccaaaccaaagcggtttgaattggatcggttgatgc 484  Q
    ||||||||||||| |||| |||  | |||||||||| |||||||||||||||||||| |     ||||||||| ||| ||||| ||||||||||||||||    
T  52828817 aaccgcaagataacaaagcatgctgtttggtttggt-cggttgacttttaaaataaaatctgaaccaaaccaacgcgatttgagttggatcggttgatgc 52828915  T
Q  485 gggtttttt 493  Q
    | |||||||    
T  52828916 gagtttttt 52828924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 523
Target Start/End: Original strand, 9330388 - 9330518
Alignment:
Q  397 agataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattc-----caaaccaaagcggtttgaattggatcggttgatgcgggtttt 491  Q
    |||||||||||||||  | ||||||| ||||||||||||||||||||| ||||     |||||||| || |||||  || |||| |||| ||| ||||||    
T  9330388 agataaaaaagtatgtggtttggtttagttcggttgacttttaaaatacattctgaatcaaaccaatgcagtttgggtttgatcagttggtgc-ggtttt 9330486  T
Q  492 ttcgatgcaatacaatcttttgtttccaacat 523  Q
    || ||  ||||||||| |||||||||||||||    
T  9330487 ttagagacaatacaattttttgtttccaacat 9330518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 503 - 594
Target Start/End: Complemental strand, 15882119 - 15882028
Alignment:
Q  503 acaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatc 594  Q
    ||||| |||||||| ||||||  |||| || |||||||  |||||||||||||||||| | |||| | |||| |||||||||||||||||||    
T  15882119 acaattttttgttttcaacatttaaatcaaattaaaaagataaaacacaacatattttcaacaatgtctccagcaatgttttaaatttcatc 15882028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 449 - 540
Target Start/End: Original strand, 17651820 - 17651910
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaa 540  Q
    ||||||||| ||||||||  |||||| ||||||||||| |||||| ||  ||||||||| ||||||||||||||| |||||  |||||||||    
T  17651820 ccaaaccaatgcggtttggtttggattggttgatgcggttttttt-gaaacaatacaattttttgtttccaacattaaaatcgagttaaaaa 17651910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 532 - 599
Target Start/End: Complemental strand, 29923250 - 29923183
Alignment:
Q  532 agttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    |||||||||||||||||||| |||||||  |||||| ||||| |||||||||| ||||| ||||||||    
T  29923250 agttaaaaaactaaaacacagcatatttccagcaatgtttccgacaatgttttgaatttaatccaaca 29923183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 509 - 599
Target Start/End: Complemental strand, 36797997 - 36797906
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaact-aaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||||||  ||||| ||||| ||||||| ||| | ||||||||| ||||||| |||||| ||||||||||||| ||| |||||||||||||    
T  36797997 ttttgtttttaacattaaaatcaagttaacaaagttaaaacacaatatattttcagcaatgtttccaacaatgtcttatatttcatccaaca 36797906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 501 - 599
Target Start/End: Complemental strand, 39158291 - 39158193
Alignment:
Q  501 atacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||||| |||||||| | || | ||||| |||||||||| ||| ||||||||||||||| ||| || ||| |||| ||||||||||| |||| |||||    
T  39158291 atacaattttttgttttcgacgttaaaatcaagttaaaaagctagaacacaacatattttcagctatgttttcaacgatgttttaaatgtcattcaaca 39158193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 338 - 446
Target Start/End: Original strand, 12973501 - 12973610
Alignment:
Q  338 ttaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgactt 436  Q
    ||||||||||||  |||||||||||||| | |||||| ||   ||||||||| |||||||||||||| || ||||  | ||||||||||| |||||| ||    
T  12973501 ttaggggtgttcgcggtgcggtttggttcggttttgaagctgaaagtcatccgaaccgcaagataaataaatatgcggtttggtttggtttggttgattt 12973600  T
Q  437 ttaaaataaa 446  Q
    | ||||||||    
T  12973601 tgaaaataaa 12973610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 560
Target Start/End: Complemental strand, 11074413 - 11074304
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    ||||| ||| |||||||| ||||||||||||||| ||| |||||  || |  |||| || ||||||||||||||| ||||| |||||||||| || |||     
T  11074413 ccaaatcaatgcggtttggattggatcggttgatacggttttttgagacg--ataccattttttgtttccaacattaaaataaagttaaaaagcttaaat 11074316  T
Q  549 acaacatatttt 560  Q
     |||||||||||    
T  11074315 gcaacatatttt 11074304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 442
Target Start/End: Original strand, 44918490 - 44918589
Alignment:
Q  338 ttaggggtgttctggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||| |||||| ||||||||||||||| |||||||||   | |||||| |||||| |||||||||||||| |||      |||||||||||||||| |||    
T  44918490 ttagaggtgttgtggtgcggtttggttcgattttgagcataaaagtcacccaaactgcaagataaaaaagcatg-----cggtttggttcggttgatttt 44918584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 559
Target Start/End: Complemental strand, 9962166 - 9962055
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatctttt-gtttccaacatcaaaattaagttaaaaaactaaaa 547  Q
    ||||||||| | ||||||  |||||||||||||||| | |||||| ||  ||||||| | |||| |||| ||| || |||||| |||||||||  |||||    
T  9962166 ccaaaccaatgtggtttgggttggatcggttgatgcagttttttttgagacaatacattttttttgttttcaatattaaaattgagttaaaaatataaaa 9962067  T
Q  548 cacaacatattt 559  Q
    ||||||||||||    
T  9962066 cacaacatattt 9962055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 351 - 446
Target Start/End: Complemental strand, 21685669 - 21685574
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||| |||||||| | |||| |||| | ||||||||  |||||||||||| ||| | |||  | |||||||||||| ||||||||||||||||||    
T  21685669 ggtgcagtttggttcggttttaaggctaaaagtcatctgaaccgcaagatacaaatgcatgcggtttggtttggttcagttgacttttaaaataaa 21685574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 351 - 446
Target Start/End: Original strand, 24629903 - 24629993
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||||| ||| ||||||| | | |||||| ||||| |||| |||||||||| |||     |||||||||| |||||||||||||||||||    
T  24629903 ggtgcggtttgggttggttttgagactaaaagtcagccaaatcgcatgataaaaaagcatg-----tggtttggtttggttgacttttaaaataaa 24629993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 351 - 458
Target Start/End: Complemental strand, 26345185 - 26345078
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||||||||| |||   ||||||||  | ||||||||| ||||  || |||||||||||||  | || ||||| |||||||||||||||||||||| |||    
T  26345185 ggtgcggtttagttccgttttgaggttagaagtcatccgaaccaaaaaataaaaaagtatgcggtttagtttgattcggttgacttttaaaataaaatcc 26345086  T
Q  451 aaaccaaa 458  Q
     |||||||    
T  26345085 gaaccaaa 26345078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 509 - 567
Target Start/End: Complemental strand, 6694332 - 6694274
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaat 567  Q
    ||||||||||||||| ||||| || |||||||  |||||||||||||||||| ||||||    
T  6694332 ttttgtttccaacattaaaatcaaattaaaaagttaaaacacaacatattttcagcaat 6694274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 457
Target Start/End: Original strand, 17989003 - 17989108
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||||||||||||| | ||||||||| | ||||||||  || |||||||||||||   ||   | ||| ||||||||||||||||||||||||||| |||    
T  17989003 ggtgcggtttggttcggttttgaggctaaaagtcatctgaatcgcaagataaaaacc-atacggtttgatttggttcggttgacttttaaaataaaatcc 17989101  T
Q  451 aaaccaa 457  Q
     ||||||    
T  17989102 gaaccaa 17989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 599
Target Start/End: Original strand, 25507001 - 25507075
Alignment:
Q  525 aaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||| |||||||||| |||||||| |||||||||  |  ||| ||| |||||||||||||||||| ||||||||    
T  25507001 aaaatcaagttaaaaagctaaaacaaaacatatttccactaatgttttcaacaatgttttaaattttatccaaca 25507075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 446
Target Start/End: Complemental strand, 40095563 - 40095453
Alignment:
Q  337 attaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgact 435  Q
    |||||||||||||  |||||||||||||| | ||||||||  | |||| |||| |||||||||||||| || ||||  | |||| ||| ||||||| | |    
T  40095563 attaggggtgttcgcggtgcggtttggttcggttttgaggttaaaagttatccgaaccgcaagataaataaatatgcggtttggcttgtttcggtttatt 40095464  T
Q  436 tttaaaataaa 446  Q
    |||||||||||    
T  40095463 tttaaaataaa 40095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 593
Target Start/End: Complemental strand, 47984466 - 47984376
Alignment:
Q  503 acaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcat 593  Q
    ||||| |||||||| | |||| |||||  |||||||||  ||||||||||||| |||   ||||||||||| |||||||||| ||||||||    
T  47984466 acaattttttgttttcgacattaaaatcgagttaaaaaggtaaaacacaacatgtttcctgcaatatttccgacaatgtttttaatttcat 47984376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 353 - 442
Target Start/End: Complemental strand, 1161867 - 1161778
Alignment:
Q  353 tgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||| | |||||||   | ||||||||| |||||| ||||||||||| |||  | ||||||||||| |||||| ||||||||    
T  1161867 tgcggtttggttcggttttgagcagaaaagtcatccgaaccgcgagataaaaaagcatgtggtttggtttggtttggttgatttttaaaa 1161778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 507 - 560
Target Start/End: Complemental strand, 40095377 - 40095324
Alignment:
Q  507 tcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    |||||||||| |||||| |||||||| ||||||| ||||||| |||||||||||    
T  40095377 tcttttgttttcaacattaaaattaaattaaaaagctaaaacgcaacatatttt 40095324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 509 - 561
Target Start/End: Complemental strand, 8165506 - 8165454
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattttt 561  Q
    ||||||||||||||| ||| |||||||||||| || ||||||||| |||||||    
T  8165506 ttttgtttccaacattaaagttaagttaaaaagctgaaacacaacctattttt 8165454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 442
Target Start/End: Complemental strand, 39256776 - 39256672
Alignment:
Q  339 taggggtgttc-tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    ||||||||||| |||||||||||||||   |||||||  || ||||||| | ||| || ||||||||||| |||  | || ||||||||||||||| |||    
T  39256776 taggggtgttcgtggtgcggtttggttctgttttgagcacaaaagtcattcgaactgcgagataaaaaagcatgcggtttagtttggttcggttgatttt 39256677  T
Q  438 taaaa 442  Q
    |||||    
T  39256676 taaaa 39256672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 50153407 - 50153471
Alignment:
Q  394 gcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaa 458  Q
    ||||||||||||| ||||  | ||| ||| ||||||||||||||||||||||| ||| |||||||    
T  50153407 gcaagataaaaaaatatgtggtttgattttgttcggttgacttttaaaataaaatccgaaccaaa 50153471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 8211266 - 8211325
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  8211266 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 8211325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 29388988 - 29389079
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||| |||||||||   | |||||||||||||||  ||||||||||| |||  | ||| ||||||| | |||| ||||||||    
T  29388988 ggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgtgagataaaaaagcatgcggtttgatttggtttgattgatttttaaaa 29389079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 442
Target Start/End: Original strand, 32953982 - 32954084
Alignment:
Q  340 aggggtgttc-tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgactttt 438  Q
    |||||||||| ||||||||||||||| | ||||||    | ||||||||||||||  | |||||||||| |||  | |||||||||||||||||| ||||    
T  32953982 aggggtgttcgtggtgcggtttggttcggttttgaacataaaagtcatccaaacctga-gataaaaaagcatgcggtttggtttggttcggttgattttt 32954080  T
Q  439 aaaa 442  Q
    ||||    
T  32954081 aaaa 32954084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 567
Target Start/End: Complemental strand, 26345008 - 26344954
Alignment:
Q  513 gtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaat 567  Q
    ||||||||||| ||||| || |||||||  |||||||||||||||||| ||||||    
T  26345008 gtttccaacattaaaatcaaattaaaaagttaaaacacaacatattttcagcaat 26344954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 567
Target Start/End: Original strand, 12973640 - 12973745
Alignment:
Q  461 ggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttt---tgtttccaacatcaaaattaagttaaaaaactaaaacacaacatat 557  Q
    |||||| ||||||||||||| ||||| |||||| ||  |||||  ||||||   ||||| |||||| ||||| || |||||||  |||||| ||||||||    
T  12973640 ggtttggattggatcggttggtgcggtttttttaga--caata--atctttctttgtttacaacattaaaatcaaattaaaaagttaaaacgcaacatat 12973735  T
Q  558 ttttagcaat 567  Q
    ||||||||||    
T  12973736 ttttagcaat 12973745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 566 - 599
Target Start/End: Original strand, 25532881 - 25532914
Alignment:
Q  566 atatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||||||||||||||||||||||||||| ||||    
T  25532881 atatttccaacaatgttttaaatttcatcaaaca 25532914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 593
Target Start/End: Complemental strand, 36203396 - 36203312
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaa-cacaacatatttttagcaatatttccaacaatgttttaaatttcat 593  Q
    ||||||||||||||| ||| |  |||||||||  ||||| ||||||||||||| || ||||||||| ||||| |||| ||||||||    
T  36203396 ttttgtttccaacattaaa-tcgagttaaaaacgtaaaaacacaacatattttcagtaatatttccgacaatatttttaatttcat 36203312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 446
Target Start/End: Complemental strand, 11074538 - 11074431
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  |||||||||||||| ||||| ||||  | ||||| ||| ||||  |||||||||||  ||   | ||||||||||||||||||||||    
T  11074538 taggggtgttcgcggtgcggtttggttcgattt-gagggtaaaagtcttccgaaccttaagataaaaaaacatacggtttggtttggttcggttgacttt 11074440  T
Q  438 taaaataaa 446  Q
     ||||||||    
T  11074439 aaaaataaa 11074431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 17989154 - 17989226
Alignment:
Q  488 ttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    |||||||||  ||||| ||  |||||||| |||||| |||||  |||||||||  ||||||||||||||||||    
T  17989154 ttttttcgagacaatagaaatttttgttttcaacattaaaatggagttaaaaaggtaaaacacaacatatttt 17989226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 351 - 443
Target Start/End: Original strand, 39127429 - 39127521
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaat 443  Q
    ||||||||||||||| |||||||||  | ||||||| ||||  |||||||| ||||| |||  |   ||||||||||  ||||||||||||||    
T  39127429 ggtgcggtttggtttaattttgaggttaaaagtcattcaaattgcaagatacaaaagcatgtggtcaggtttggttcaattgacttttaaaat 39127521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 350 - 446
Target Start/End: Complemental strand, 47984628 - 47984532
Alignment:
Q  350 tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||| |||||||||| | ||||||| | | ||||||| ||||  |||||||||||||  ||| || ||| ||||||| |  ||||||||||||||||    
T  47984628 tggtacggtttggttcggttttgagactaaaagtcattcaaattgcaagataaaaaaacatgcagtttgatttggtttgactgacttttaaaataaa 47984532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 3e-37; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 351 - 589
Target Start/End: Complemental strand, 48293532 - 48293290
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt-- 448  Q
    ||||| |||||||| | ||||||||  | ||||||||| ||||||||| |||||||| |||  | ||||||||||||||||| ||||||||||||| |      
T  48293532 ggtgcagtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaagcatgcggtttggtttggttcggttgtcttttaaaataaaatcc 48293433  T
Q  449 ---ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaa 545  Q
       ||||||||| ||||||||  |||||||||||| ||  |||||||||||  ||||||||| ||||||||||||||| |||||  |||||||||| |||    
T  48293432 gaaccaaaccaatgcggtttgggttggatcggttggtg-aggttttttcgagacaatacaattttttgtttccaacattaaaatcgagttaaaaaagtaa 48293334  T
Q  546 aacacaacatatttttagcaatatttccaacaatgttttaaatt 589  Q
    ||||| | ||||||  |||||| ||| | |||||||||| ||||    
T  48293333 aacacgaaatatttccagcaatgttttcgacaatgtttttaatt 48293290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 351 - 593
Target Start/End: Original strand, 48338297 - 48338546
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    ||||| |||||||| | |||| |||  | ||||||||| ||||| |||||||||||  ||| || ||||||||||||||||||||||||||||||| |||    
T  48338297 ggtgcagtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaaaaac-atgcagtttggtttggttcggttgacttttaaaataaaatcc 48338395  T
Q  451 aaaccaaa----------gcggtttgaattggatc-ggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaa 539  Q
    ||||||||          ||||||||||||||||| ||||| ||  |||||||||||  ||||||||| |||||||| |||||| |||||  ||||||||    
T  48338396 aaaccaaaccaaatcaatgcggtttgaattggatcgggttggtg-tggttttttcgagacaatacaattttttgttttcaacattaaaatcgagttaaaa 48338494  T
Q  540 aactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcat 593  Q
    |  |||||||||||||| ||| ||||||  |||| |||||||||| ||||||||    
T  48338495 aggtaaaacacaacata-tttcagcaat-gttccgacaatgtttttaatttcat 48338546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 390 - 571
Target Start/End: Original strand, 45983378 - 45983565
Alignment:
Q  390 aaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaa-----gcggtttgaattggatcggttgatgc 484  Q
    |||||||||||||||||  |||  | |||||||| ||||||||||||| |||||||  |||||||||||     ||||||||  ||||||||||||||||    
T  45983378 aaccgcaagataaaaaatcatgcggtttggtttgattcggttgactttaaaaataacatccaaaccaaactaatgcggtttgggttggatcggttgatgc 45983477  T
Q  485 gggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattttt-agcaatattt 571  Q
    ||||||||||||    |||   | ||||||||||||||| ||||| | ||||||||  ||||||||||||||||||| ||||||||||    
T  45983478 gggttttttcgaaatgataattttttttgtttccaacattaaaatcaggttaaaaagttaaaacacaacatatttttcagcaatattt 45983565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 391 - 560
Target Start/End: Complemental strand, 48602606 - 48602433
Alignment:
Q  391 accgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt-----ccaaaccaaagcggtttgaattggatcggttgatgcg 485  Q
    ||||||||||||||| || ||  | |||||||||||||||||||||| |||||| | |     ||||||||| ||||||||  |||||||||||| |||     
T  48602606 accgcaagataaaaatgtttgcggtttggtttggttcggttgactttgaaaatacaatcctaaccaaaccaatgcggtttgggttggatcggttggtgc- 48602508  T
Q  486 ggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    |||||| ||||  ||||||||| | |||||| |||||| ||||||||||||||||  ||||||| ||||||||||    
T  48602507 ggttttatcgaaacaatacaatttgttgttttcaacattaaaattaagttaaaaagttaaaacaaaacatatttt 48602433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 353 - 446
Target Start/End: Original strand, 20986379 - 20986472
Alignment:
Q  353 tgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||||||| || | |||||| || | |||||||||||||||||||||||| |||||||  | ||||||||||||||||||||| |||||||||    
T  20986379 tgcggtttgtttcggttttgaagctaaaagtcatccaaaccgcaagataaacaagtatgcggtttggtttggttcggttgacttataaaataaa 20986472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 351 - 516
Target Start/End: Complemental strand, 36106547 - 36106372
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggtt-ggtttggttcggttgacttttaaaataaatt- 448  Q
    |||||||||||||| | ||||||||  | ||||||||| |||||||||||||||||  |||  | || ||||||||||||||||||||||||||||| |     
T  36106547 ggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaaaaaacatgcggttttggtttggttcggttgacttttaaaataaaatc 36106448  T
Q  449 ---------ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgttt 516  Q
             ||||||||| ||||||||| ||||||| |||| ||| |||||||||||  ||||||||| ||||||||    
T  36106447 cgaaccaaaccaaaccaatgcggtttgagttggatcagttggtgc-ggttttttcgagacaatacaattttttgttt 36106372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 598
Target Start/End: Original strand, 48684891 - 48684991
Alignment:
Q  498 gcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaa 597  Q
    |||||||||| |||| |||||||||| ||||| || ||||||| ||||||||||| ||| ||| || ||| ||| ||||||||||||| |||||||||||    
T  48684891 gcaatacaattttttatttccaacattaaaatcaaattaaaaagctaaaacacaatatagtttcagtaatgttttcaacaatgttttatatttcatccaa 48684990  T
Q  598 c 598  Q
    |    
T  48684991 c 48684991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 532 - 599
Target Start/End: Complemental strand, 18881981 - 18881914
Alignment:
Q  532 agttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||||||| ||| |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  18881981 agttaaaaagctataacacaacatatttctagcaatgtttccaacaatattttaaatttcatccaaca 18881914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 355 - 444
Target Start/End: Original strand, 4642381 - 4642470
Alignment:
Q  355 cggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaata 444  Q
    |||||||||| | ||||||||| | |||| |||| |||||||||||||| ||||||| || ||| ||||||||| |||||||||||||||    
T  4642381 cggtttggttcggttttgaggctaaaagttatccgaaccgcaagataaataagtatgtagtttgatttggttcgattgacttttaaaata 4642470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 458
Target Start/End: Complemental strand, 23120397 - 23120277
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  ||||||||||| || |||||||| |  | ||||||||| |||||||||||||||||| |||  | ||||||||||||| ||||||||    
T  23120397 taggggtgttcgcggtgcggtttgattcgattttgaaggtaaaagtcatccgaaccgcaagataaaaaagcatgcggtttggtttggttcgattgacttt 23120298  T
Q  438 taaaataaattccaaaccaaa 458  Q
     |||| ||  |||||||||||    
T  23120297 aaaaaaaacatccaaaccaaa 23120277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 351 - 458
Target Start/End: Complemental strand, 5122511 - 5122404
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||||||||||||| | ||||||||  | |||||||  ||||| ||||||||||||| |||  | ||| |||||||||||||||||| |||||||| |||    
T  5122511 ggtgcggtttggttcggttttgagggtaaaagtcatataaaccacaagataaaaaagcatgcggtttgatttggttcggttgactttaaaaataaaatcc 5122412  T
Q  451 aaaccaaa 458  Q
     |||||||    
T  5122411 gaaccaaa 5122404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 351 - 493
Target Start/End: Complemental strand, 23450111 - 23449964
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt-- 448  Q
    ||||| |||| ||| | ||||||||  | ||||||||| ||| |||||||||| |||||||  | |||||||||||||||| |||||||||||| | |      
T  23450111 ggtgcagtttagttcggttttgaggttaaaagtcatccgaactgcaagataaataagtatgcggtttggtttggttcggttaacttttaaaatataatcc 23450012  T
Q  449 ---ccaaaccaaagcggtttgaattggatcggttgatgcgggtttttt 493  Q
       ||||||||| |||||||| ||||||||| ||| ||||| ||||||    
T  23450011 acaccaaaccaatgcggtttggattggatcgattgttgcggttttttt 23449964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 419 - 560
Target Start/End: Original strand, 46471463 - 46471608
Alignment:
Q  419 gtttggttcggttgacttttaaaataaattccaaaccaaa-----gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttg 513  Q
    ||||| |||||||||||||||||||||| | ||||| |||     ||||||||| || |||||||| |||||| ||||||| |  ||||| ||| |||||    
T  46471463 gtttgattcggttgacttttaaaataaaattcaaactaaatcagtgcggtttgagttagatcggttaatgcgg-ttttttctagacaatataattttttg 46471561  T
Q  514 tttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    |||  ||||| ||||| ||||||||||| ||||||||| ||| ||||    
T  46471562 ttttaaacattaaaatcaagttaaaaaagtaaaacacagcatgtttt 46471608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 449 - 561
Target Start/End: Original strand, 15723950 - 15724062
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    |||||| || ||||||||  |||||||||||||||||| ||||||| |  | ||| | | ||||||||||||||| ||||| | |||||| |  ||||||    
T  15723950 ccaaactaatgcggtttgggttggatcggttgatgcggtttttttcaagacgataaatttttttgtttccaacattaaaatcaggttaaagaggtaaaac 15724049  T
Q  549 acaacatattttt 561  Q
    |||||||||||||    
T  15724050 acaacatattttt 15724062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 469 - 599
Target Start/End: Original strand, 40494506 - 40494631
Alignment:
Q  469 ttggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaata 568  Q
    |||||||||||| ||| | |||||||||| | ||||||| ||||   |||||||| ||| | |||||||||  | ||||||||||||||||| |||||      
T  40494506 ttggatcggttggtgcag-ttttttcgataccatacaatttttt---tccaacattaaagtcaagttaaaag-caaaaacacaacatattttcagcaagg 40494600  T
Q  569 tttccaacaatgttttaaatttcatccaaca 599  Q
    ||||||| ||| |||||||||||||||||||    
T  40494601 tttccaaaaatattttaaatttcatccaaca 40494631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 335 - 442
Target Start/End: Original strand, 43630516 - 43630624
Alignment:
Q  335 tgattaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttga 433  Q
    |||||||| ||||||  |||||||||||||| |||||||||   | |||||||||||||||  |||||||||| ||||  | ||||||||||| ||||||    
T  43630516 tgattaggagtgttcgcggtgcggtttggttcgattttgagtataaaagtcatccaaaccgtgagataaaaaaatatgcggtttggtttggtttggttga 43630615  T
Q  434 cttttaaaa 442  Q
     ||||||||    
T  43630616 tttttaaaa 43630624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 500 - 567
Target Start/End: Original strand, 8312002 - 8312069
Alignment:
Q  500 aatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaat 567  Q
    |||||||| |||||||| |||||| ||||| |||||||||| ||||||||||||| ||||| ||||||    
T  8312002 aatacaattttttgtttacaacattaaaatcaagttaaaaagctaaaacacaacaaattttcagcaat 8312069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 446
Target Start/End: Complemental strand, 11031762 - 11031672
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||||| ||| ||||||||| | |||||| ||||| |||| |||||||||| |||     |||||||||| |||||||||||||||||||    
T  11031762 ggtgcggtttgggttggttttgaggctaaaagtcagccaaatcgcatgataaaaaagcatg-----tggtttggtttggttgacttttaaaataaa 11031672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 449 - 557
Target Start/End: Original strand, 29700786 - 29700894
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggtttttt-cgatgcaatacaa-tcttttgtttccaacatcaaaattaagttaaaaaactaaa 546  Q
    ||||||||| |||| ||| ||||| ||||||| ||| | |||||| |||  |||||||| | ||||||||||||||| ||||| |||||||||| |||||    
T  29700786 ccaaaccaatgcggcttgtattggttcggttggtgcagtttttttgcga--caatacaacttttttgtttccaacattaaaatcaagttaaaaacctaaa 29700883  T
Q  547 acacaacatat 557  Q
    |||||||||||    
T  29700884 acacaacatat 29700894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 598
Target Start/End: Original strand, 51907180 - 51907279
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaac 598  Q
    ||||| ||| |||||||| |||||| ||||| ||||||||||  |||||||||||||| ||  | |||| |||  |||||||||||| ||||||||||||    
T  51907180 caatataattttttgttttcaacattaaaatcaagttaaaaaggtaaaacacaacatacttccaccaatgtttttaacaatgttttatatttcatccaac 51907279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 509 - 599
Target Start/End: Original strand, 4688799 - 4688889
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    |||||||| |||||| ||| | ||||||||||  |||||||||||||||||  | |||| || |||||||||||||| ||||| |||||||    
T  4688799 ttttgttttcaacattaaactcaagttaaaaaggtaaaacacaacatatttgcaacaatgttcccaacaatgttttatatttcctccaaca 4688889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 454 - 560
Target Start/End: Original strand, 6101951 - 6102057
Alignment:
Q  454 ccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaac 553  Q
    |||| ||||||||| || ||  ||||| | ||| |||||||||  ||||||||| ||||||||||||||  ||||| |||||||||   |||||||||||    
T  6101951 ccaatgcggtttgagtttgactggttggtacggtttttttcgagacaatacaattttttgtttccaacagtaaaatcaagttaaaaggataaaacacaac 6102050  T
Q  554 atatttt 560  Q
    |||||||    
T  6102051 atatttt 6102057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 509 - 599
Target Start/End: Original strand, 17845010 - 17845100
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    |||||||| |||||| |||||| |||||||||  || | |||||||||||| |||| || ||| | ||||| |||||||||||||||||||    
T  17845010 ttttgttttcaacattaaaattgagttaaaaaggtatagcacaacatatttctagccatgttttcgacaatattttaaatttcatccaaca 17845100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 416 - 560
Target Start/End: Original strand, 29232773 - 29232918
Alignment:
Q  416 ttggtttggttcggttgacttttaaaataaattcc-----aaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatctt 510  Q
    ||||||| ||||||||||||||||||||||| |||     ||||||| ||| |||| ||||||||||||| ||| | |||||| ||  ||||| | | ||    
T  29232773 ttggtttagttcggttgacttttaaaataaaatccgaactaaaccaatgcgatttggattggatcggttggtgc-gattttttaga--caata-attttt 29232868  T
Q  511 ttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    ||||||||||||| ||||| || ||||| | |||||| ||||||||||||    
T  29232869 ttgtttccaacattaaaatcaaattaaacagctaaaaaacaacatatttt 29232918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 449 - 553
Target Start/End: Complemental strand, 32223333 - 32223231
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    |||||| || ||||||||  || ||||||||||||||| |||||  ||  ||||||||| ||||||||||||||| |||||  |||||||||  ||||||    
T  32223333 ccaaacaaatgcggtttgggttagatcggttgatgcggttttttgaga--caatacaattttttgtttccaacattaaaatctagttaaaaaggtaaaac 32223236  T
Q  549 acaac 553  Q
    |||||    
T  32223235 acaac 32223231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 426
Target Start/End: Original strand, 6333259 - 6333347
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggtt 426  Q
    |||||||||||  |||||||||||||| |||||||||   | |||||||||||||||| ||||||||||| |||  | |||||||||||    
T  6333259 taggggtgttcgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggtt 6333347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 458
Target Start/End: Original strand, 15723876 - 15723944
Alignment:
Q  390 aaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaa 458  Q
    ||||| || ||||||||||||| || || ||||||||||||||||||| |||||||  |||||||||||    
T  15723876 aaccgtaatataaaaaagtatgcagtttagtttggttcggttgactttaaaaataacatccaaaccaaa 15723944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 442
Target Start/End: Complemental strand, 40900223 - 40900119
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  |||||||||||||| | |||||||   | ||||||||||||| || ||||||||||| |||  | |||||||||||| ||||| |||    
T  40900223 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcagttgatttt 40900124  T
Q  438 taaaa 442  Q
    |||||    
T  40900123 taaaa 40900119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 571
Target Start/End: Original strand, 49640954 - 49641026
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatattt 571  Q
    ||||||||| |||| |||||||||| ||||| |||||||| |  |||||||||||||||||| | ||||||||    
T  49640954 caatacaattttttttttccaacattaaaatcaagttaaagagttaaaacacaacatattttcaacaatattt 49641026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 560
Target Start/End: Complemental strand, 18536658 - 18536547
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    |||||| || || |||||| ||||||| |||| ||||| |||||| ||  ||||||||| ||||||||||||| | ||| |  |||||||||  ||||||    
T  18536658 ccaaacaaatgcagtttgagttggatcagttggtgcggttttttttgagacaatacaatattttgtttccaaccttaaagtcgagttaaaaaggtaaaac 18536559  T
Q  549 acaacatatttt 560  Q
    ||||| ||||||    
T  18536558 acaacttatttt 18536547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 40806945 - 40806854
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||| ||||||||| | |||||||   | |||||||||||||||| ||||||||||| |||    |||||||||||||||||| ||||||||    
T  40806945 ggtgtggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcgatttggtttggttcggttgatttttaaaa 40806854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 5262062 - 5262000
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||||||||||||||||| |||  | ||||||| |||| ||||| ||||||||    
T  5262062 aagtcatccaaaccgcaagataaaaaagcatgcggtttggtttagttcagttgatttttaaaa 5262000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 446
Target Start/End: Complemental strand, 23625999 - 23625933
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||||| | ||| |||||||||||||  | || |||||||||| |||||||||||||||||    
T  23625999 aagtcatccaaatcacaaaataaaaaagtatgcggttttgtttggttcgcttgacttttaaaataaa 23625933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 446
Target Start/End: Complemental strand, 19753649 - 19753553
Alignment:
Q  350 tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||  |||| ||||||||||| | |  |||||  ||||| ||| | ||||||||||  | ||| |||||||||||||||||||||||||||    
T  19753649 tggtgcggtgcggttcgattttgaggctaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaa 19753553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 446
Target Start/End: Original strand, 19786157 - 19786253
Alignment:
Q  350 tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||  |||| ||||||||||| | |  |||||  ||||| ||| | ||||||||||  | ||| |||||||||||||||||||||||||||    
T  19786157 tggtgcggtgcggttcgattttgaggctaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaa 19786253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 443
Target Start/End: Original strand, 21069001 - 21069093
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaat 443  Q
    |||||||||| ||| ||||||||||  | ||||||| | ||| |||| ||||| || |||| || |||||| |||| ||||||||||||||||    
T  21069001 ggtgcggtttagttcgattttgaggttaaaagtcattcgaactgcaaaataaataaatatgcagtttggttcggtttggttgacttttaaaat 21069093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 509 - 561
Target Start/End: Complemental strand, 23120211 - 23120159
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattttt 561  Q
    ||||||||||||||| ||||| | ||||||||  |||||||||||||||||||    
T  23120211 ttttgtttccaacattaaaatcaggttaaaaagttaaaacacaacatattttt 23120159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 446
Target Start/End: Original strand, 8484625 - 8484716
Alignment:
Q  355 cggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||| |||||||||||||||  | ||||| | | |||||||||||||| || ||||  | |||  ||| ||||||||||||||||||||||    
T  8484625 cggttcggtttgattttgaggttaaaagtctttccaaccgcaagataaataactatgcggtttgtgttgattcggttgacttttaaaataaa 8484716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 18536739 - 18536680
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||| ||||||||||||| |   || |||| ||||||||||||||||||||||    
T  18536739 tcatccaaaccacaagataaaaaagcacacagtttgggttggttcggttgacttttaaaa 18536680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 29636761 - 29636820
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  29636761 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 29636820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 29644220 - 29644161
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  29644220 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 29644161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 36077560 - 36077619
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||| |||||||| ||| |||||||||||  | |||||||||||||||||| ||||||||    
T  36077560 tcattcaaaccgcgagagaaaaaagtatgcggtttggtttggttcggttgatttttaaaa 36077619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 48996072 - 48996131
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| | ||||||||| |||  | |||||||||||||||||| ||||||||    
T  48996072 tcatccaaaccgcgaaataaaaaagcatgtggtttggtttggttcggttgatttttaaaa 48996131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 50571053 - 50570994
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  50571053 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 50570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 445
Target Start/End: Original strand, 8311885 - 8311934
Alignment:
Q  396 aagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataa 445  Q
    |||||||||| ||||| || |||||||||||||| | |||||||||||||    
T  8311885 aagataaaaatgtatgcagtttggtttggttcggattacttttaaaataa 8311934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 442
Target Start/End: Complemental strand, 23937659 - 23937554
Alignment:
Q  338 ttaggggtgttc-tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgactt 436  Q
    |||||| ||||| |||||||||||| |||  |||||||   | |||||||| ||||  | |||||||||| ||||  | |||||||||||||||||| ||    
T  23937659 ttagggatgttcgtggtgcggtttgatttagttttgagcataaaagtcatctaaactacgagataaaaaaatatgcggtttggtttggttcggttgattt 23937560  T
Q  437 ttaaaa 442  Q
    ||||||    
T  23937559 ttaaaa 23937554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 510
Target Start/End: Complemental strand, 29335133 - 29335072
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatctt 510  Q
    |||||||||  |||||||| |||||| || |||||| | |||||||||| ||||||||||||    
T  29335133 ccaaaccaatacggtttgagttggattggatgatgcagtttttttcgatacaatacaatctt 29335072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 479
Target Start/End: Original strand, 41325090 - 41325179
Alignment:
Q  390 aaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaagcggtttgaattggatcggtt 479  Q
    |||||| ||||||| |||||||  | ||| |||  |||||||||||||||||||     ||||||||| |||||||| ||||||||||||    
T  41325090 aaccgcgagataaataagtatgcggtttgatttaattcggttgacttttaaaatccgaaccaaaccaatgcggtttggattggatcggtt 41325179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 332 - 439
Target Start/End: Original strand, 10218614 - 10218722
Alignment:
Q  332 ttttgattaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggt 430  Q
    |||||||||||||||||   |||||| ||||||| | |||||||   | |||||||| ||||| ||||||||||||| |||  | |||||||| ||| ||    
T  10218614 ttttgattaggggtgtttgcggtgcgttttggttcggttttgagcataaaagtcatctaaacctcaagataaaaaagcatgcggtttggtttgattcagt 10218713  T
Q  431 tgactttta 439  Q
    ||| |||||    
T  10218714 tgattttta 10218722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 446
Target Start/End: Original strand, 18396323 - 18396379
Alignment:
Q  390 aaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||||||||||||||  ||||  | |||||||||||| |||||||||||| |||||    
T  18396323 aaccgcaagataaaaagatatgcggtttggtttggttcagttgacttttaagataaa 18396379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 442
Target Start/End: Complemental strand, 32223459 - 32223355
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  ||||||||||| || | ||||||||  | |||||||||||| || |||||||||||| |||  | |||| || |||| ||| |||||    
T  32223459 taggggtgttcgcggtgcggtttgattcggttttgaggttaaaagtcatccaaatcgaaagataaaaaagcatgcggtttggatttgttccgtttacttt 32223360  T
Q  438 taaaa 442  Q
    |||||    
T  32223359 taaaa 32223355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 351 - 407
Target Start/End: Original strand, 52344693 - 52344749
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaag 407  Q
    |||||||||||| |||||||||||   | |||||||||||||||  |||||||||||    
T  52344693 ggtgcggtttgggttgattttgagcataaaagtcatccaaaccgtgagataaaaaag 52344749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 351 - 584
Target Start/End: Complemental strand, 27572172 - 27571925
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||||||||||||| | ||||||||  | ||||||||| ||||||||| |||||||| |||  | ||||||||||||||||| ||||||||||||| |||    
T  27572172 ggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaagcatgcggtttggtttggttcggttgtcttttaaaataaaatcc 27572073  T
Q  451 aaaccaaa---------------gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagtt 535  Q
     |||||||               ||||||||  |||||||||||| ||||| |||||||||  ||||||||| ||||||||||||||| |||||| ||||    
T  27572072 gaaccaaaccaaaccaaaccaatgcggtttgggttggatcggttggtgcgg-ttttttcgagacaatacaattttttgtttccaacattaaaattgagtt 27571974  T
Q  536 aaaaaactaaaacacaacatatttttagcaatatttccaacaatgtttt 584  Q
    |||||| |||||||| ||||||||  |||||| ||| | ||||||||||    
T  27571973 aaaaaagtaaaacacgacatatttccagcaatgttttcgacaatgtttt 27571925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 357 - 599
Target Start/End: Original strand, 2588936 - 2589186
Alignment:
Q  357 gtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaacca 456  Q
    |||||||| ||||||||| | | |||||||   ||||| |||||||||||  |||  | ||||||||||| ||||||||||||||||||||||  |||||    
T  2588936 gtttggttcgattttgagactaaaagtcatttgaaccgtaagataaaaaaacatgcggtttggtttggtttggttgacttttaaaataaattcagaacca 2589035  T
Q  457 aa-----gcggtttgaattggatcggttgatgcgggtttttt--cgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaaca 549  Q
    ||     ||||||||  |||||||||||| ||||| ||||||  | |  ||||||||| ||||||||||||  | ||||| ||||||||||  |||||||    
T  2589036 aatcgatgcggtttgggttggatcggttggtgcggttttttttactagacaatacaattttttgtttccaattttaaaatcaagttaaaaagttaaaaca 2589135  T
Q  550 caacatatttttagcaatatttccaacaat-gttttaaatttcatccaaca 599  Q
    ||||||| || | ||||| ||||| ||||| ||||| |||||||| |||||    
T  2589136 caacatacttctggcaatgtttccgacaatggtttttaatttcatacaaca 2589186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 501 - 599
Target Start/End: Original strand, 18845628 - 18845726
Alignment:
Q  501 atacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||||| ||||||||||||||| ||||| |||||||||| | ||||||||||||| || ||||||| ||||| |||||||||| ||||||||||||||    
T  18845628 atacaattttttgtttccaacattaaaatcaagttaaaaagccaaaacacaacataattctagcaatgtttccgacaatgtttttaatttcatccaaca 18845726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 6718701 - 6718801
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaac 598  Q
    ||||||||| ||||||||  ||| | |||||| ||||||||| ||| ||||||| ||||||| |||||| ||| ||||||| ||||||||||||||||||    
T  6718701 caatacaattttttgtttttaacgttaaaattgagttaaaaagctataacacaatatattttcagcaatgttttcaacaatattttaaatttcatccaac 6718800  T
Q  599 a 599  Q
    |    
T  6718801 a 6718801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 416 - 589
Target Start/End: Complemental strand, 40331552 - 40331377
Alignment:
Q  416 ttggtttggttcggttgacttttaaaataaattccaaaccaaa-----gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatctt 510  Q
    ||||||||||||||||||||||||||||||| ||| |||||||     || |||| |  |||||   ||||| ||| |||||| ||  ||||||||| ||    
T  40331552 ttggtttggttcggttgacttttaaaataaaatccgaaccaaatcattgcagtttaagctggattaattgatacggtttttttaga--caatacaat-tt 40331456  T
Q  511 ttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatt 589  Q
    || ||| |||||||||||| |||||| ||| ||||| ||| |||  ||||| ||||| |||||||||||||||||||||    
T  40331455 ttattttcaacatcaaaatcaagttagaaagctaaagcacgacaattttttggcaatgtttccaacaatgttttaaatt 40331377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 352 - 458
Target Start/End: Complemental strand, 35240950 - 35240844
Alignment:
Q  352 gtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcca 451  Q
    ||||||||||||| ||||||||||| | || |||||| ||||| ||| | ||||||||||  | ||| |||||||||||||||||| |||||||| |||     
T  35240950 gtgcggtttggttcgattttgaggctaaaattcatccgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgactttaaaaataaaatccg 35240851  T
Q  452 aaccaaa 458  Q
    |||||||    
T  35240850 aaccaaa 35240844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 339 - 567
Target Start/End: Original strand, 36567664 - 36567892
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  ||||| ||||| |||| ||||||||  | |||| |||| ||||| ||||| || |||||||  | |||||| |||| ||||||||||    
T  36567664 taggggtgttcgcggtgccgtttgatttggttttgaggttaaaagttatccgaaccgtaagatgaataagtatgcggtttggttcggtttggttgacttt 36567763  T
Q  438 taaaataaatt-----ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaa 532  Q
    ||||||||| |     ||||||||| |||||||| ||||||||||||| ||| | ||| || ||  |||||     |||| || ||||||| ||||| ||    
T  36567764 taaaataaaattcaaaccaaaccaatgcggtttggattggatcggttggtgcagttttattaga--caata----atttttttcccaacattaaaatcaa 36567857  T
Q  533 gttaaaaaactaaaacacaacatatttttagcaat 567  Q
     ||||||| ||||||||||||||||||| ||||||    
T  36567858 attaaaaagctaaaacacaacatattttcagcaat 36567892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 353 - 446
Target Start/End: Original strand, 25495042 - 25495135
Alignment:
Q  353 tgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||||| | ||||||||| | |||||||| ||||||||| ||||| ||||||| || |||||||  ||||||||| ||||||||||||    
T  25495042 tgcggtttggttcggttttgaggctaaaagtcatctaaaccgcaacataaataagtatgcagtttggtttttttcggttgatttttaaaataaa 25495135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 446
Target Start/End: Original strand, 40884285 - 40884381
Alignment:
Q  350 tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||| ||| ||||| ||||||||||  | ||||||| | ||||||||||||||||||||||  | ||||||| ||||||| |||||||||||||||    
T  40884285 tggtgtggtgtggttcgattttgaggttaaaagtcattcgaaccgcaagataaaaaagtatgctgtttggtttagttcggtcgacttttaaaataaa 40884381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 449 - 567
Target Start/End: Original strand, 14652516 - 14652635
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaa-ctaaaa 547  Q
    ||||||||| ||| ||||  |||||||||||| ||| | |||||||||  | || |||| |||||||| |||||| ||||| ||||||||||| || |||    
T  14652516 ccaaaccaatgcgatttgggttggatcggttggtgcagtttttttcgagacgatgcaattttttgttttcaacattaaaatcaagttaaaaaagcttaaa 14652615  T
Q  548 cacaacatatttttagcaat 567  Q
    ||||||||||||| ||||||    
T  14652616 cacaacatattttcagcaat 14652635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 536 - 599
Target Start/End: Complemental strand, 20191877 - 20191814
Alignment:
Q  536 aaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||||||||||||||||||||||  |||||| ||| |||||||||||||||||||||| ||||    
T  20191877 aaaaaactaaaacacaacatatttccagcaatgtttgcaacaatgttttaaatttcatcgaaca 20191814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 30265918 - 30265827
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||||| |||||||   | || ||||| ||||||||||||||||||  ||| || |||||||||||||||||| ||||||||    
T  30265918 ggtgcggtttggtttggttttgagcataaaaatcatctaaaccgcaagataaaaaaacatgcagtttggtttggttcggttgatttttaaaa 30265827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 449 - 571
Target Start/End: Original strand, 6633383 - 6633504
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    ||||||||| | ||||||| ||||||||||||||| || |||||| ||  |||||   | |||||||| |||||| |||||  |||||||||  ||||||    
T  6633383 ccaaaccaatgtggtttgagttggatcggttgatgtggttttttt-gagccaatatttttttttgttttcaacattaaaatccagttaaaaaggtaaaac 6633481  T
Q  549 acaacatatttttagcaatattt 571  Q
    |||||||||||| ||||||||||    
T  6633482 acaacatattttcagcaatattt 6633504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 501 - 567
Target Start/End: Original strand, 11402709 - 11402775
Alignment:
Q  501 atacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaat 567  Q
    ||||||| ||||||||||||||| ||||| |||||||||| || |||||||||||||||| ||||||    
T  11402709 atacaattttttgtttccaacattaaaatcaagttaaaaagctgaaacacaacatattttcagcaat 11402775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 500 - 597
Target Start/End: Original strand, 12263976 - 12264072
Alignment:
Q  500 aatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaa 597  Q
    |||||| | |||||||| |||||||||||| ||| ||||||  ||||| ||||| |||||| |||||| | ||||||||||||| |||||||||||||    
T  12263976 aatacatttttttgttttcaacatcaaaataaagataaaaagttaaaa-acaacttattttcagcaatgtatccaacaatgtttcaaatttcatccaa 12264072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 469 - 556
Target Start/End: Original strand, 34969413 - 34969499
Alignment:
Q  469 ttggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacata 556  Q
    |||||||||||||||||  |||||  |   ||||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  34969413 ttggatcggttgatgcgattttttatgggacaatacaat-ttttgttttcaacattaaaatcaagttaaaaaactaaaacacaacata 34969499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 368 - 458
Target Start/End: Complemental strand, 28224974 - 28224884
Alignment:
Q  368 ttttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaa 458  Q
    ||||||||| | ||||||| |||| ||||||||||| || |||| || |||||||| |||||||   |||||||||||| |||||||||||    
T  28224974 ttttgaggcaaaaagtcatgcaaaacgcaagataaataaatatgcagtttggtttgtttcggttcttttttaaaataaaatccaaaccaaa 28224884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 418 - 560
Target Start/End: Original strand, 36760136 - 36760284
Alignment:
Q  418 ggtttggttcggttgacttttaaaataaatt-----ccaaaccaaagcggtttgaattggatcggttgatgcg--ggttttttcgatgcaatacaatctt 510  Q
    ||||||||||| ||||||||||||||||| |     ||||||||| | ||||||| |||||||||||| ||||    |||||| ||  ||||||||| ||    
T  36760136 ggtttggttcgattgacttttaaaataaaatccgaaccaaaccaatgtggtttgagttggatcggttggtgcgtttttttttttgagacaatacaatttt 36760235  T
Q  511 ttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    |||||||||| ||  ||| | |||||||||  ||||||||||||||||||    
T  36760236 ttgtttccaa-atttaaaatgagttaaaaatttaaaacacaacatatttt 36760284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 339 - 411
Target Start/End: Original strand, 10090248 - 10090321
Alignment:
Q  339 taggggtgttc-tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatg 411  Q
    ||||||||||| ||||||||||||||| | ||||||||| | ||||||||  |||||||||||||| |||||||    
T  10090248 taggggtgttcatggtgcggtttggttcggttttgaggctaaaagtcatcagaaccgcaagataaataagtatg 10090321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 492
Target Start/End: Complemental strand, 12379078 - 12379009
Alignment:
Q  423 ggttcggttgacttttaaaataaattccaaaccaaagcggtttgaattggatcggttgatgcgggttttt 492  Q
    |||| ||||||||||||||||| | |||||||||| || |||||| |||||||||||| ||||| |||||    
T  12379078 ggtttggttgacttttaaaatacaatccaaaccaatgcagtttgagttggatcggttggtgcggtttttt 12379009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 557
Target Start/End: Complemental strand, 20192037 - 20191890
Alignment:
Q  420 tttggttcggttgacttttaaaataaattcc----------aaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaat-acaatc 508  Q
    ||||||||||||||||||||||||||| |||          ||||||| |||||||||||||||||||||  ||||| |||| ||||| |||| |   |     
T  20192037 tttggttcggttgacttttaaaataaaatccgaactaaatcaaaccaatgcggtttgaattggatcggtttgtgcggtttttatcgatacaataattttt 20191938  T
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatat 557  Q
    |||||||| |||||| ||||  ||||||| |||||||||||||||||||    
T  20191937 ttttgttttcaacattaaaa-caagttaataaactaaaacacaacatat 20191890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 509 - 561
Target Start/End: Complemental strand, 691517 - 691465
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattttt 561  Q
    ||||||||||||||| ||||| ||||||||||  |||||||||||||||||||    
T  691517 ttttgtttccaacattaaaatcaagttaaaaagttaaaacacaacatattttt 691465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 503 - 595
Target Start/End: Original strand, 18432202 - 18432294
Alignment:
Q  503 acaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatcc 595  Q
    ||||| |||||||| | |||| |||||  |||||||||  |||||||||||||||||| | |||||||||  |||||||||| | ||||||||    
T  18432202 acaattttttgttttcgacattaaaatcgagttaaaaaggtaaaacacaacatattttcaacaatatttctgacaatgtttttactttcatcc 18432294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 597
Target Start/End: Original strand, 35727049 - 35727165
Alignment:
Q  482 tgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaa-acacaacatatttttagcaatatttccaacaatg 580  Q
    ||||| |||| ||||  ||||||||  |||||||| |||||| ||||| || ||||| |  |||| |||||||| || || |||||||||||||||  ||    
T  35727049 tgcggtttttatcgagtcaatacaaatttttgttttcaacattaaaatcaaattaaatagttaaacacacaacaaatgttcagcaatatttccaactgtg 35727148  T
Q  581 ttttaaatttcatccaa 597  Q
    |||||||||||||||||    
T  35727149 ttttaaatttcatccaa 35727165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 333404 - 333313
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||| |||||||||   | |||||||||||||||| ||||| ||||| |||    ||||||||||||| |||| ||||||||    
T  333404 ggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagatagaaaagcatgcgaattggtttggttcgattgatttttaaaa 333313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 8408978 - 8409037
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| |||||||||||  | |||||||||||||||||| ||||||||    
T  8408978 tcatccaaaccgcgagagaaaaaagtatgcggtttggtttggttcggttgatttttaaaa 8409037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 351 - 446
Target Start/End: Original strand, 40692451 - 40692545
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||| |||| || | ||||||||| | ||||||| ||||| |||||||||||| | |||    |||||||||||||||||||||||||||||||    
T  40692451 ggtgcgatttgattcggttttgaggctagaagtcattcaaactgcaagataaaaa-gcatgcgatttggtttggttcggttgacttttaaaataaa 40692545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 509 - 560
Target Start/End: Original strand, 41454992 - 41455043
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    ||||||||||||||| ||||| || ||||||| |||||||||||||||||||    
T  41454992 ttttgtttccaacattaaaatcaaattaaaaagctaaaacacaacatatttt 41455043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 12166262 - 12166200
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||| ||| ||| ||||||||||| ||| || |||||||||||||||||| ||||||||    
T  12166262 aagtcatcaaaatcgcgagataaaaaagcatgcagtttggtttggttcggttgatttttaaaa 12166200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 36177203 - 36177141
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||||| ||||||||| | |||  | |||||||||||||||||| ||||||||    
T  36177203 aagtcatccaaaccgcgagataaaaatgcatgcggtttggtttggttcggttgatttttaaaa 36177141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 534 - 599
Target Start/End: Complemental strand, 6894349 - 6894284
Alignment:
Q  534 ttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    |||||||  |||||||||||||||||| ||  |  ||| |||||||||||||||||||||||||||    
T  6894349 ttaaaaagttaaaacacaacatattttcagtcacgttttcaacaatgttttaaatttcatccaaca 6894284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 458
Target Start/End: Complemental strand, 17132166 - 17132110
Alignment:
Q  402 aaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaa 458  Q
    ||||||||||  | ||| ||||||||||||||||||||||||||| ||| |||||||    
T  17132166 aaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaa 17132110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 458
Target Start/End: Complemental strand, 32244452 - 32244396
Alignment:
Q  402 aaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaa 458  Q
    ||||||||||  | ||| ||||||||||||||||||||||||||| ||| |||||||    
T  32244452 aaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaa 32244396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 440
Target Start/End: Original strand, 42544643 - 42544703
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaa 440  Q
    |||||||| ||||||| ||||||||||| |||  | |||||||||||||||||| ||||||    
T  42544643 aagtcatctaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaa 42544703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 540
Target Start/End: Complemental strand, 6895352 - 6895262
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaa 540  Q
    ||||||||| | ||||||| || |||| |||||||||| |||| | ||  ||||||||| | |||||||| |||| ||||||||||||||||    
T  6895352 ccaaaccaatgtggtttgagttagatcagttgatgcgg-ttttgtagagacaatacaatttgttgtttcccacattaaaattaagttaaaaa 6895262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 11917393 - 11917452
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  11917393 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 11917452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 27886511 - 27886452
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  27886511 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 27886452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 442
Target Start/End: Complemental strand, 2226978 - 2226920
Alignment:
Q  384 catccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||| ||||||||||| | |  | |||||||||||||||||| ||||||||    
T  2226978 catccaaaccgcgagataaaaaagaacgtggtttggtttggttcggttgatttttaaaa 2226920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 572
Target Start/End: Complemental strand, 7487288 - 7487215
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttc 572  Q
    |||||| || |||||||||  |||| ||||||||||||||||  ||| ||||||||||||| || |||| ||||    
T  7487288 caatacgattttttgtttcagacattaaaattaagttaaaaaggtaagacacaacatatttctaacaatgtttc 7487215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 561
Target Start/End: Original strand, 6595105 - 6595157
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattttt 561  Q
    ||||||||||||||| ||||| |  |||||||  |||||||||||||||||||    
T  6595105 ttttgtttccaacattaaaatcagattaaaaagttaaaacacaacatattttt 6595157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 442
Target Start/End: Original strand, 38433632 - 38433744
Alignment:
Q  331 attttgattaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcgg 429  Q
    ||||||| |||||||||||  ||||| |||| ||| | |||||||   | ||||||| |||||||| ||||||||||  |||  | || |||||||||||    
T  38433632 attttgactaggggtgttcacggtgcagtttagttcggttttgagcataaaagtcattcaaaccgcgagataaaaaatcatgcggtttagtttggttcgg 38433731  T
Q  430 ttgacttttaaaa 442  Q
    |||| ||||||||    
T  38433732 ttgatttttaaaa 38433744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 351 - 593
Target Start/End: Original strand, 25819 - 26068
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    ||||| |||||||| | |||| |||  | ||||||||| ||||| |||||||||||  ||| || ||||||||||||||||||||||||||||||| |||    
T  25819 ggtgcagtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaaaaac-atgcagtttggtttggttcggttgacttttaaaataaaatcc 25917  T
Q  451 aaaccaaa----------gcggtttgaattggatc-ggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaa 539  Q
    ||||||||          ||||||||||||||||| ||||| ||  |||||||||||  ||||||||| |||||||| |||||| |||||  ||||||||    
T  25918 aaaccaaaccaaatcaatgcggtttgaattggatcgggttggtg-tggttttttcgagacaatacaattttttgttttcaacattaaaatcgagttaaaa 26016  T
Q  540 aactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcat 593  Q
    |  |||||||||||||| ||| ||||||  |||| |||||||||| ||||||||    
T  26017 aggtaaaacacaacata-tttcagcaat-gttccgacaatgtttttaatttcat 26068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 566
Target Start/End: Original strand, 14478 - 14701
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    ||||||||||||||   |||||| |  | ||||||||| |||||||||||||||||| |||    |||||||||||| ||||||| |||||  | | |||    
T  14478 ggtgcggtttggttcagttttgaagttaaaagtcatccgaaccgcaagataaaaaagcatgcgatttggtttggttcagttgactcttaaagcacaatcc 14577  T
Q  451 aaaccaaa----------gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaa 540  Q
     |||||||          ||||||||  ||||||| |||| ||||| |||||| ||  ||||||||| |||||||| |||||| |||||  |||||||||    
T  14578 gaaccaaaccaaacaaatgcggtttgt-ttggatcagttggtgcggttttttt-gagacaatacaattttttgtttgcaacattaaaatcgagttaaaaa 14675  T
Q  541 actaaaacacaacatatttttagcaa 566  Q
      ||||| |||||||||||| |||||    
T  14676 ggtaaaatacaacatattttcagcaa 14701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 7e-29; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 351 - 571
Target Start/End: Complemental strand, 22811300 - 22811084
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||||||||||||||||||||||||| | ||||||||  ||| |||||||||| | |||||  | ||||||||||||||||||||||||||||||| |      
T  22811300 ggtgcggtttggtttgattttgaggctaaaagtcatctgaactgcaagataaatatgtatgctgtttggtttggttcggttgacttttaaaataaaattt 22811201  T
Q  451 aaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacac 550  Q
     |||||| |||||||| ||  ||||||||| ||| |  ||||| ||  ||||| | | |||||||| |||| | ||||  || ||||||| |||||||||    
T  22811200 gaaccaatgcggtttggataagatcggttggtgcagtgtttttaga--caata-atttttttgttttcaaccttaaaagcaaattaaaaagctaaaacac 22811104  T
Q  551 aacatatttttagcaatattt 571  Q
    ||||||||||| |||||||||    
T  22811103 aacatattttt-gcaatattt 22811084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 488 - 597
Target Start/End: Complemental strand, 12074169 - 12074060
Alignment:
Q  488 ttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaa 587  Q
    |||||||||  ||||||||| ||||||||||||||| |||||||| ||||||  | ||||||||||||||||  |||||| |||||||||||| |||| |    
T  12074169 ttttttcgagacaatacaattttttgtttccaacattaaaattaatttaaaatgcaaaaacacaacatatttcgagcaatgtttccaacaatgctttata 12074070  T
Q  588 tttcatccaa 597  Q
    ||||||||||    
T  12074069 tttcatccaa 12074060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 339 - 446
Target Start/End: Original strand, 11218892 - 11219000
Alignment:
Q  339 taggggtgttctgg-tgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    ||||||||||| || |||||||||||| ||||||||||| | ||||||||| || ||||||||||| |||||||    ||||||||||| ||||||||||    
T  11218892 taggggtgttcggggtgcggtttggttcgattttgaggctaaaagtcatccgaaacgcaagataaataagtatgcgatttggtttggtttggttgacttt 11218991  T
Q  438 taaaataaa 446  Q
    |||||||||    
T  11218992 taaaataaa 11219000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 594
Target Start/End: Complemental strand, 3129534 - 3129439
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatc 594  Q
    |||| |||| |||||||| |||||| |||||  ||||||||| |||||||| |||||||||| |||||| ||||| ||||||||||||||||||||    
T  3129534 caatgcaattttttgttttcaacattaaaatcgagttaaaaatctaaaacataacatattttcagcaatgtttccgacaatgttttaaatttcatc 3129439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 416 - 600
Target Start/End: Complemental strand, 12660318 - 12660128
Alignment:
Q  416 ttggtttggttcggttgacttttaaaataaattccaaaccaaa-----gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaa-tct 509  Q
    |||||||||||||||||| ||| |||||||| ||| |||||||     |||||||| ||||||| ||||  || || |||| ||||  |||| ||| | |    
T  12660318 ttggtttggttcggttgagtttaaaaataaaatccgaaccaaacaaatgcggtttggattggattggtttgtgtggtttttatcgagacaattcaatttt 12660219  T
Q  510 tttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaacaa 600  Q
    ||| ||| |||||||||||| ||||||||||||||||||||| ||||| |  | | |||||||| | | |||||||||||||||| |||||    
T  12660218 ttttttttcaacatcaaaatcaagttaaaaaactaaaacacatcatatctccaacgatatttccgatagtgttttaaatttcatctaacaa 12660128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 339 - 559
Target Start/End: Original strand, 40436378 - 40436607
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagt-atgaaggttggtttggttcggttgactt 436  Q
    |||||||||||  |||||||||||||| | ||||||||  | |||| |||||||  |||||||||||||   |||  | |||||||||||||||||||||    
T  40436378 taggggtgttcgcggtgcggtttggttcggttttgagggtaaaagtgatccaaattgcaagataaaaaaaacatgccgtttggtttggttcggttgactt 40436477  T
Q  437 ttaaaataaatt----------ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaa 526  Q
    | |||||||| |          ||||||||| ||||||||  |||||||||||| ||||| ||||||||   | ||||||| |||| ||  |||||| ||    
T  40436478 taaaaataaaatttgaaccgaaccaaaccaatgcggtttgggttggatcggttggtgcgg-ttttttcgtgacgatacaattttttttt--caacattaa 40436574  T
Q  527 aattaagttaaaaaactaaaacacaacatattt 559  Q
    ||||||||||||||||| |||||||||||||||    
T  40436575 aattaagttaaaaaactgaaacacaacatattt 40436607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 342 - 446
Target Start/End: Complemental strand, 24682227 - 24682122
Alignment:
Q  342 gggtgttc-tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaa 440  Q
    |||||||| |||||||| |||||| | ||||||||| | || |||||| |||||||||||||| ||||||| || |||||||| |||| |||||||||||    
T  24682227 gggtgttcgtggtgcggcttggttcggttttgaggctaaaattcatccgaaccgcaagataaataagtatgcagtttggtttgattcgattgacttttaa 24682128  T
Q  441 aataaa 446  Q
    ||||||    
T  24682127 aataaa 24682122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 442
Target Start/End: Original strand, 33068208 - 33068312
Alignment:
Q  339 taggggtgttc-tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    ||||||||||| ||||||||||||||| | |||||||   | |||||||||||||||||||||||||||| |||  | |||||||||||| ||||| |||    
T  33068208 taggggtgttcgtggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcaagataaaaaagcatgcggtttggtttggttcagttgatttt 33068307  T
Q  438 taaaa 442  Q
    |||||    
T  33068308 taaaa 33068312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 509 - 599
Target Start/End: Original strand, 41346016 - 41346107
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaa-ctaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    |||||||| |||||| || || ||||||||||  ||||||||||||||||||||||| || ||||||||||||||| |||||| ||||||||    
T  41346016 ttttgtttacaacattaacatcaagttaaaaaggctaaaacacaacatatttttagccatgtttccaacaatgtttaaaattttatccaaca 41346107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 337 - 442
Target Start/End: Original strand, 10661094 - 10661200
Alignment:
Q  337 attaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgact 435  Q
    |||||||||||||  |||||||||||||| | |||||||   | |||||||||||||||| ||||||||||| |||  | |||||||||||||||||| |    
T  10661094 attaggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatt 10661193  T
Q  436 tttaaaa 442  Q
    |||||||    
T  10661194 tttaaaa 10661200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 442
Target Start/End: Complemental strand, 36910471 - 36910367
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  ||||||||||||||||||||||||   | |||||||| ||||||| ||||||||||| |||  | || ||||||||||||||| |||    
T  36910471 taggggtgttcgcggtgcggtttggtttgattttgagcataaaagtcatcaaaaccgcgagataaaaaagcatgcggtttagtttggttcggttgatttt 36910372  T
Q  438 taaaa 442  Q
    |||||    
T  36910371 taaaa 36910367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 446
Target Start/End: Original strand, 33565910 - 33566007
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaa--aagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||| |||||||||| ||||||||| | |||||||   |||||||||||||||  |||||||  | ||||||||||||||||||||| |||||||||    
T  33565910 ggtgcagtttggtttggttttgaggctaaaagtcatttgaaccgcaagataaaaaaaagtatgcggtttggtttggttcggttgacttctaaaataaa 33566007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 509 - 591
Target Start/End: Complemental strand, 38926390 - 38926308
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttc 591  Q
    |||||||| |||||| ||||| ||||||||||  |||||||||||||||||| |  ||||||| ||||||||||||| |||||    
T  38926390 ttttgttttcaacattaaaatcaagttaaaaaggtaaaacacaacatattttcaaaaatatttacaacaatgttttatatttc 38926308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 28801726 - 28801826
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagttaaaaaa-ctaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaa 597  Q
    |||||||||||||||||| |||||| ||||| |||  ||||||  ||||||||||| |||||| ||| || ||| |||||||||||| ||||||||||||    
T  28801726 caatacaatcttttgttttcaacattaaaatcaagacaaaaaagttaaaacacaacgtattttcagc-atgttttcaacaatgttttgaatttcatccaa 28801824  T
Q  598 ca 599  Q
    ||    
T  28801825 ca 28801826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 351 - 458
Target Start/End: Original strand, 44336727 - 44336835
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagt-atgaaggttggtttggttcggttgacttttaaaataaattc 449  Q
    |||||||||||||| | |||||||   | ||||||||| |||||||||||||||||   |||  | ||||||||||||||||||||||||||||| | ||    
T  44336727 ggtgcggtttggttcggttttgagtttaaaagtcatccgaaccgcaagataaaaaaaacatgcggtttggtttggttcggttgacttttaaaatacaatc 44336826  T
Q  450 caaaccaaa 458  Q
    | |||||||    
T  44336827 cgaaccaaa 44336835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 449 - 568
Target Start/End: Original strand, 4785304 - 4785418
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    ||||||||| |||||||||||||||| ||||  ||||| |||||   | ||||||  || |||| |||||||||| ||||| || |||||||  ||||||    
T  4785304 ccaaaccaatgcggtttgaattggattggttagtgcggtttttt---aggcaata--attttttttttccaacattaaaatcaaattaaaaagttaaaac 4785398  T
Q  549 acaacatatttttagcaata 568  Q
    |||| |||||||||||||||    
T  4785399 acaatatatttttagcaata 4785418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 599
Target Start/End: Complemental strand, 7428531 - 7428310
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt-----ccaaaccaaagcggtttgaattggat 474  Q
    ||||||||  ||||||| |||||||| | |||  | ||||||||||||||||||||||||||||||| |     |||||| || |||||||| |||||||    
T  7428531 aagtcatctgaaccgcatgataaaaatgcatgcggtttggtttggttcggttgacttttaaaataaaattcgaaccaaactaatgcggtttggattggat 7428432  T
Q  475 cggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttcca 574  Q
     ||||  ||   | |||||| |  ||||||||| ||||||||||||||| | |||  |||| ||| |||| || |||| ||||||  | |||| ||||      
T  7428431 tggtt--tggacggtttttcaaaacaatacaattttttgtttccaacattagaatcgagtt-aaagactataatacaatatatttccaacaatgtttctt 7428335  T
Q  575 acaatgttttaaatttcatccaaca 599  Q
     ||||||||||||||||||| ||||    
T  7428334 gcaatgttttaaatttcatctaaca 7428310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 560
Target Start/End: Complemental strand, 9012856 - 9012748
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    ||||||||| ||||||||  |||||||||||| ||||| |||||  ||  ||||| ||| ||||||||||  ||  ||||| ||||||||||||||||||    
T  9012856 ccaaaccaatgcggtttgggttggatcggttggtgcggttttttgaga--caatataattttttgtttccg-cagtaaaatcaagttaaaaaactaaaac 9012760  T
Q  549 acaacatatttt 560  Q
    |||| |||||||    
T  9012759 acaaaatatttt 9012748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 458
Target Start/End: Complemental strand, 36340888 - 36340780
Alignment:
Q  350 tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattc 449  Q
    |||||||||  |||| ||||||||||| | |  |||||  ||||| ||| | ||||||||||  | ||| ||||||||||||||||||||||||||| ||    
T  36340888 tggtgcggtgcggttcgattttgaggctaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatc 36340789  T
Q  450 caaaccaaa 458  Q
    | |||||||    
T  36340788 cgaaccaaa 36340780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 509 - 598
Target Start/End: Original strand, 12912612 - 12912702
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatg-ttttaaatttcatccaac 598  Q
    |||||||| |||||| ||||| ||||||||| | |||||||||||||||||  |||||| |||| | |  || ||||||||||||||||||    
T  12912612 ttttgttttcaacattaaaatcaagttaaaacattaaaacacaacatatttccagcaatgtttctagcggtgtttttaaatttcatccaac 12912702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 555
Target Start/End: Original strand, 6617027 - 6617096
Alignment:
Q  486 ggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacat 555  Q
    |||||||| ||  ||||||||| ||||||||||||| | |||||  ||||||||| ||||||||||||||    
T  6617027 ggtttttttgagacaatacaattttttgtttccaactttaaaatcgagttaaaaagctaaaacacaacat 6617096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 422 - 567
Target Start/End: Complemental strand, 12193514 - 12193368
Alignment:
Q  422 tggttcggttgacttttaaaataaatt-----ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgttt 516  Q
    ||||||| ||||||||||||||||| |     ||||| ||| |||||||| ||||||||||||||||| |||||||| ||  ||||    | ||||||||    
T  12193514 tggttcgattgacttttaaaataaaatctgaaccaaatcaatgcggtttggattggatcggttgatgc-ggttttttaga--caat--tttattttgttt 12193420  T
Q  517 ccaa-catcaaaattaagttaaaaaactaaaacacaacatatttttagcaat 567  Q
    |||| | | ||||| || ||||||| ||||||||||||||||||| ||||||    
T  12193419 ccaaccgttaaaatcaaattaaaaagctaaaacacaacatattttcagcaat 12193368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 422 - 567
Target Start/End: Complemental strand, 12437942 - 12437796
Alignment:
Q  422 tggttcggttgacttttaaaataaatt-----ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgttt 516  Q
    ||||||| ||||||||||||||||| |     ||||| ||| |||||||| ||||||||||||||||| |||||||| ||  ||||    | ||||||||    
T  12437942 tggttcgattgacttttaaaataaaatctgaaccaaatcaatgcggtttggattggatcggttgatgc-ggttttttaga--caat--tttattttgttt 12437848  T
Q  517 ccaa-catcaaaattaagttaaaaaactaaaacacaacatatttttagcaat 567  Q
    |||| | | ||||| || ||||||| ||||||||||||||||||| ||||||    
T  12437847 ccaaccgttaaaatcaaattaaaaagctaaaacacaacatattttcagcaat 12437796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 350 - 403
Target Start/End: Complemental strand, 30254259 - 30254206
Alignment:
Q  350 tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaa 403  Q
    ||||||||||||||||||||||||||| | || | ||| |||||||||||||||    
T  30254259 tggtgcggtttggtttgattttgaggctaaaaattatcaaaaccgcaagataaa 30254206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 444
Target Start/End: Original strand, 4785220 - 4785284
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaata 444  Q
    ||||||| | |||||||  |||||||||||||  | ||| |||||||||||||||||||||||||    
T  4785220 aagtcatacgaaccgcagaataaaaaagtatgcggtttgatttggttcggttgacttttaaaata 4785284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 432
Target Start/End: Original strand, 8036027 - 8036079
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttg 432  Q
    ||||||||  |||||||||||||||||| ||| || |||||||||||||||||    
T  8036027 aagtcatctgaaccgcaagataaaaaagcatgcagtttggtttggttcggttg 8036079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 3006667 - 3006608
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  3006667 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 3006608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 5803341 - 5803282
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  5803341 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 5803282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 443
Target Start/End: Complemental strand, 28073333 - 28073226
Alignment:
Q  337 attaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgact 435  Q
    |||||||||||||  |||||||||||| |||  ||| |||| | ||||||||  |||||||| ||||||||  |||  | || ||||||||| |||||||    
T  28073333 attaggggtgttcgcggtgcggtttggcttgggtttaaggctaaaagtcatctgaaccgcaatataaaaaaacatgtggtttagtttggttcagttgact 28073234  T
Q  436 tttaaaat 443  Q
    ||||||||    
T  28073233 tttaaaat 28073226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 446
Target Start/End: Original strand, 6591248 - 6591278
Alignment:
Q  416 ttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||||||||||||||||||||||||    
T  6591248 ttggtttggttcggttgacttttaaaataaa 6591278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 555
Target Start/End: Original strand, 6591308 - 6591401
Alignment:
Q  461 ggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacat 555  Q
    ||||||| |||||| ||||| | ||| |||||| ||  ||||||||| |||| |||||||| | |||||  ||||||||| ||||||||||||||    
T  6591308 ggtttgagttggattggttggtacggttttttt-gagacaatacaattttttatttccaactttaaaatcgagttaaaaagctaaaacacaacat 6591401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 14549208 - 14549270
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||||  |||||||||| ||||  | |||||||| ||||||||| ||||||||    
T  14549208 aagtcatccaaaccgtgagataaaaaaatatgcggtttggtttgattcggttgatttttaaaa 14549270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 458
Target Start/End: Complemental strand, 31497661 - 31497619
Alignment:
Q  416 ttggtttggttcggttgacttttaaaataaattccaaaccaaa 458  Q
    |||||||||||||||||||||| |||||||  |||||||||||    
T  31497661 ttggtttggttcggttgactttaaaaataacatccaaaccaaa 31497619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 431
Target Start/End: Complemental strand, 12883870 - 12883777
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggtt 431  Q
    |||||||||||  |||||||||||||| | ||||||||  | ||||||| | |||| ||| ||||| |||||||  | ||||||||||||||||    
T  12883870 taggggtgttcgcggtgcggtttggttcggttttgaggttaaaagtcattcgaaccacaaaataaataagtatgcggtttggtttggttcggtt 12883777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 492
Target Start/End: Complemental strand, 30254130 - 30254097
Alignment:
Q  459 gcggtttgaattggatcggttgatgcgggttttt 492  Q
    |||||||||||||||||||||||||||| |||||    
T  30254130 gcggtttgaattggatcggttgatgcggtttttt 30254097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 560
Target Start/End: Complemental strand, 15272300 - 15272209
Alignment:
Q  469 ttggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaa-actaaaacacaacatatttt 560  Q
    |||||||||||| ||||| |||||| ||  | || |||| |||| ||||||||||||||||  |||||||||   ||||||||||||||||||    
T  15272300 ttggatcggttggtgcggttttttt-gagacgatccaattttttatttccaacatcaaaatcgagttaaaaacggtaaaacacaacatatttt 15272209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 469 - 560
Target Start/End: Complemental strand, 15452669 - 15452578
Alignment:
Q  469 ttggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaa-actaaaacacaacatatttt 560  Q
    |||||||||||| ||||| |||||| ||  | || |||| |||| ||||||||||||||||  |||||||||   ||||||||||||||||||    
T  15452669 ttggatcggttggtgcggttttttt-gagacgatccaattttttatttccaacatcaaaatcgagttaaaaacggtaaaacacaacatatttt 15452578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 561
Target Start/End: Complemental strand, 31497562 - 31497510
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattttt 561  Q
    ||||||||||||||| ||||| | ||||| ||  |||||||||||||||||||    
T  31497562 ttttgtttccaacattaaaatcaggttaataagttaaaacacaacatattttt 31497510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 7e-29; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 416 - 599
Target Start/End: Original strand, 8064516 - 8064699
Alignment:
Q  416 ttggtttggttcggttgacttttaaaataaattc----caaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttt 511  Q
    ||||||||||| | ||||||||||||||||| ||    |||||| | ||||||||  ||| |||||||| ||||| ||||| | |   |||||||| |||    
T  8064516 ttggtttggtttgattgacttttaaaataaaatcgaaccaaaccgatgcggtttgggttgaatcggttggtgcggttttttactagataatacaattttt 8064615  T
Q  512 tgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    |||||||||||| ||||| |||||||||| |||||||||||||    | ||||||| |||||||||||||||| ||||||||||||||    
T  8064616 tgtttccaacattaaaatcaagttaaaaagctaaaacacaaca----tctagcaatgtttccaacaatgtttttaatttcatccaaca 8064699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 366 - 599
Target Start/End: Original strand, 4562827 - 4563069
Alignment:
Q  366 gattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt-----ccaaaccaaagc 460  Q
    ||||||||||| | ||| ||||| || || ||||||||| |||||  || |||||||||||| ||||| |||||||||||| |     |||||||||| |    
T  4562827 gattttgaggctaaaagacatcccaatcgtaagataaaagagtatttagtttggtttggttcagttgatttttaaaataaaatttaaaccaaaccaaacc 4562926  T
Q  461 -----ggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacat 555  Q
         | ||||| ||| || ||||||||||| |||||| ||  ||||||||| ||||||||||||||| |||||  ||||||||| ||| ||||||||||    
T  4562927 aatatgatttgagttgtattggttgatgcggttttttt-gagacaatacaattttttgtttccaacattaaaatcgagttaaaaagctataacacaacat 4563025  T
Q  556 atttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||| |  ||| |||  ||||||||||| ||||||||||||||    
T  4563026 attttcaataatgtttgaaacaatgttttcaatttcatccaaca 4563069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 340 - 560
Target Start/End: Complemental strand, 24645091 - 24644867
Alignment:
Q  340 aggggtgttc-tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgactttt 438  Q
    |||||||||| | ||||||||||||| ||||||||||  | ||||||||| |||||||||||||| |||||||  | |||||||| ||| ||||||||||    
T  24645091 aggggtgttcgttgtgcggtttggttcgattttgaggttaaaagtcatccgaaccgcaagataaataagtatgcggtttggtttgattc-gttgactttt 24644993  T
Q  439 aaaataaattccaaaccaaa-----gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttt-tgtttccaacatcaaaattaa 532  Q
    |||||||| |||||||||||     || ||||| ||||||||||| | |||||  ||||| ||  |||||   | ||| | ||| ||| || ||||| ||    
T  24644992 aaaataaaatccaaaccaaaccaatgcagtttggattggatcggtgggtgcggtctttttaga--caataatttatttattttttcaaaattaaaatcaa 24644895  T
Q  533 gttaaaaaactaaaacacaacatatttt 560  Q
     |||||||||||||||||||||||||||    
T  24644894 attaaaaaactaaaacacaacatatttt 24644867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 469 - 573
Target Start/End: Original strand, 14564516 - 14564620
Alignment:
Q  469 ttggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaata 568  Q
    |||||||||||| ||||| ||||| | |  ||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||| || ||||     
T  14564516 ttggatcggttgttgcggttttttactagacaatacaattttttgtttcgaacattaaaatcaagttaaaaaactaaaacacaacatatttctaacaatg 14564615  T
Q  569 tttcc 573  Q
    |||||    
T  14564616 tttcc 14564620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 351 - 557
Target Start/End: Original strand, 29048082 - 29048291
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||||||||||||| | |||| |||  | ||||||||||||||  ||| |||||| || ||    ||||||||||||||||||||||||||||||| |||    
T  29048082 ggtgcggtttggttcggttttaaggttaaaagtcatccaaaccataaggtaaaaaggtgtgcgatttggtttggttcggttgacttttaaaataaaatcc 29048181  T
Q  451 -----aaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaa 545  Q
         ||||||| ||| |||| ||| ||| ||||| ||||| |||||| ||  ||||| | | ||||||||||||||| ||||| || |||||||  |||    
T  29048182 gaactaaaccaatgcgatttggattagattggttggtgcggtttttttaga--caataaatttttttgtttccaacattaaaatcaaattaaaaagttaa 29048279  T
Q  546 aacacaacatat 557  Q
    ||||||||||||    
T  29048280 aacacaacatat 29048291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 380 - 599
Target Start/End: Original strand, 30752515 - 30752750
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattc--------------caaaccaaagcggttt 465  Q
    ||||||||  |||||||||||||||||| |||  | ||||||||||||||||||||||||||  ||||||              |||||||| |||||||    
T  30752515 aagtcatctgaaccgcaagataaaaaagcatgcggtttggtttggttcggttgacttttaaataaaattcaaaacaaaccaaatcaaaccaatgcggttt 30752614  T
Q  466 gaattggatcggttgatgcgggtttttt-cgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagc 564  Q
       ||| |||| ||| ||||| |||||| |||  ||||||||| ||||||||||||| |||||||  |||||||||||||||||| |||||||||||| |    
T  30752615 aggttgaatcgtttggtgcggttttttttcgagacaatacaattttttgtttccaacttcaaaatcgagttaaaaaactaaaacataacatatttttaac 30752714  T
Q  565 aatatttccaacaatg-ttttaaatttcatccaaca 599  Q
     || ||| | || ||| |||| ||||||||||||||    
T  30752715 gatgttttcgacgatgttttttaatttcatccaaca 30752750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 357 - 560
Target Start/End: Original strand, 9686019 - 9686220
Alignment:
Q  357 gtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt-----cca 451  Q
    |||||||| |||||||||||   ||||||||  |||||||||||||| |||||||  | |||||||||||||||| |||||||||||||| |     |||    
T  9686019 gtttggttcgattttgaggctcaaagtcatctgaaccgcaagataaataagtatgcggtttggtttggttcggttaacttttaaaataaaatccgaacca 9686118  T
Q  452 aaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacaca 551  Q
    |||||| |||||||| |||||||| |||| |||   ||||||       | ||||| |||| |||||||| | ||||| || ||||||| ||||||||||    
T  9686119 aaccaatgcggtttggattggatcagttggtgcaattttttt-------aaacaatattttttttccaacgttaaaatcaaattaaaaagctaaaacaca 9686211  T
Q  552 acatatttt 560  Q
    || ||||||    
T  9686212 acttatttt 9686220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 592
Target Start/End: Complemental strand, 14940665 - 14940454
Alignment:
Q  385 atccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt-----ccaaaccaaagcggtttgaattggatcggtt 479  Q
    |||| |||||||||||||||||  ||| || ||||||||||||||||||||||| ||||||| |     ||||||||| ||||||||  |||||| ||||    
T  14940665 atccgaaccgcaagataaaaaaacatgcagtttggtttggttcggttgactttttaaataaaatccgaaccaaaccaacgcggtttgggttggattggtt 14940566  T
Q  480 gatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt-tagcaatatttccaacaa 578  Q
    | ||| |||||||||||  ||||| | | |||||||||| |||| |||||  |||| |||| | |  ||| ||||||||||  |||||| ||||| ||||    
T  14940565 ggtgc-ggttttttcgagacaata-attattttgtttcccacattaaaatcgagttgaaaatcaatgacaaaacatattttcaagcaatgtttccgacaa 14940468  T
Q  579 tgttttaaatttca 592  Q
    | ||||||||||||    
T  14940467 tattttaaatttca 14940454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 572
Target Start/End: Original strand, 20500506 - 20500742
Alignment:
Q  338 ttaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgactt 436  Q
    ||||||||||||  |||||||||||||||| ||||||||  | ||||||  | |||||||||||||||||| | | || ||||||||  || ||||||||    
T  20500506 ttaggggtgttcgcggtgcggtttggtttggttttgagggtaaaagtcactcgaaccgcaagataaaaaagcaagtagtttggtttgactcagttgactt 20500605  T
Q  437 ttaaaataaattccaaaccaaagcg-----gtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaatta 531  Q
      |||||||| ||||||||||| |      |||||  |||||| ||||| ||||| |||||  || |  | ||  | |||||||| |||||| ||||| |    
T  20500606 --aaaataaaatccaaaccaaatcaatatagtttgggttggattggttggtgcggttttttgagacg--acacgtttttttgtttacaacattaaaatca 20500701  T
Q  532 agttaaaaaactaaaacacaacatatttttagcaatatttc 572  Q
    ||||||||| ||||||||||||||||||| |||||| ||||    
T  20500702 agttaaaaatctaaaacacaacatattttcagcaatgtttc 20500742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 451 - 599
Target Start/End: Complemental strand, 13859400 - 13859256
Alignment:
Q  451 aaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacac 550  Q
    ||||||| ||||||| | ||||||||||||||| || |||||  ||  ||||||||| |||| |||||||||  ||||| |||||||||   || |||||    
T  13859400 aaaccaatgcggtttcagttggatcggttgatgtggttttttgaga--caatacaat-ttttatttccaacactaaaatcaagttaaaaggttataacac 13859304  T
Q  551 aacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    |||||||||| |||||| ||||| ||||| |||||||||| ||||||||    
T  13859303 aacatattttcagcaatgtttccgacaatattttaaattt-atccaaca 13859256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 339 - 479
Target Start/End: Complemental strand, 35040350 - 35040209
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  |||||||||||||| | |||||||   | |||||||||||||||| ||||||||||| |||  | ||||||||||| |||||| |||    
T  35040350 taggggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggtttggttgatttt 35040251  T
Q  438 taaaataaattccaaaccaaagcggtttgaattggatcggtt 479  Q
    |||||     |||||||||| |||||||| ||||| ||||||    
T  35040250 taaaaagtcatccaaaccaatgcggtttggattggttcggtt 35040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 446
Target Start/End: Original strand, 22413780 - 22413888
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  ||||| ||||| |||| ||||||||  | ||||||||| ||||  |||||||| |||||||  | ||||||||||||||||||||||    
T  22413780 taggggtgttcgaggtgcagtttgatttggttttgaggttaaaagtcatccgaaccagaagataaataagtatgcggtttggtttggttcggttgacttt 22413879  T
Q  438 taaaataaa 446  Q
    |||||||||    
T  22413880 taaaataaa 22413888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 351 - 567
Target Start/End: Complemental strand, 892468 - 892237
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    ||||||||||||||  ||||| |||| | ||||||||| |||||||| ||||||||  |||  | |||||||||||||||| |||||||||||||  |||    
T  892468 ggtgcggtttggttcaattttaaggctaaaagtcatccgaaccgcaaaataaaaaaacatgcggtttggtttggttcggttaacttttaaaataacatcc 892369  T
Q  451 ----------------aaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagt 534  Q
                    ||||||| | ||||||  |||||| ||||||||| |||||||||||  ||||| ||| |||||||| |||||| |||||  |||    
T  892368 gaactaaaccaaacaaaaaccaatgtggtttgggttggattggttgatgc-ggttttttcgagacaatataattttttgttttcaacattaaaatcgagt 892270  T
Q  535 taaaaaactaaaacacaacatatttttagcaat 567  Q
    || |||  ||||||||||||||||| |||||||    
T  892269 tagaaagttaaaacacaacatatttctagcaat 892237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 10494508 - 10494417
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||||| |||||||   | |||||||||||||||| ||||||||||| |||  | ||| |||||||||||||| ||||||||    
T  10494508 ggtgcggtttggtttggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatggggtttgatttggttcggttgatttttaaaa 10494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 351 - 589
Target Start/End: Complemental strand, 19135240 - 19134987
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaag-tatgaaggttggtttggttcggttgacttttaaaataaatt- 448  Q
    |||| ||||||||| | ||||||||| | ||||||||  ||||| ||| |||||||  ||||  | ||||||||||||||||||||||||||||||| |     
T  19135240 ggtgtggtttggttcggttttgaggcaaaaagtcatctgaaccgaaaggtaaaaaaaatatgcggtttggtttggttcggttgacttttaaaataaaata 19135141  T
Q  449 ----ccaaaccaaa----------gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagt 534  Q
        ||||||||||          ||| |||| |||||||||||||||| || ||||||  |  ||||||||| |||||||| |||||| |||||  |||    
T  19135140 tgaaccaaaccaaatcaaactaatgcgatttggattggatcggttgatgtggtttttttt-agacaatacaattttttgttttcaacattaaaatcgagt 19135042  T
Q  535 taaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatt 589  Q
    ||||||  ||||||||  |||||||  |||||| ||| |||||||||||| ||||    
T  19135041 taaaaaggtaaaacacggcatatttccagcaatgttttcaacaatgtttttaatt 19134987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 351 - 458
Target Start/End: Original strand, 11417010 - 11417118
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagat-aaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattc 449  Q
    |||||||||||||| |||||| |||| | || |||||| ||||| ||| | |||||||||||  | ||| ||||||| | ||||||||||||||||| ||    
T  11417010 ggtgcggtttggttcgatttttaggctaaaattcatccgaaccgtaagctgaaaaaagtatgctgtttgatttggtttgattgacttttaaaataaaatc 11417109  T
Q  450 caaaccaaa 458  Q
    |||||||||    
T  11417110 caaaccaaa 11417118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 469 - 593
Target Start/End: Original strand, 28633023 - 28633145
Alignment:
Q  469 ttggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaata 568  Q
    |||||||||||||||||| |||||||||  ||||| ||| |||||||| |||||| | |||  | |||||||  ||||| ||||||||||| || ||||     
T  28633023 ttggatcggttgatgcgg-ttttttcgagacaatataat-ttttgttttcaacattagaatcgatttaaaaaggtaaaatacaacatatttctaacaatg 28633120  T
Q  569 tttccaacaatgttttaaatttcat 593  Q
    ||||| |||||||||| ||||||||    
T  28633121 tttccgacaatgtttttaatttcat 28633145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 10590806 - 10590897
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||| | |||||||   | ||||||||||||| || ||||||||||| |||  | |||||||||||||||||| ||||||||    
T  10590806 ggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaa 10590897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 509 - 560
Target Start/End: Complemental strand, 12108522 - 12108471
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttt 560  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  12108522 ttttgtttccaacattaaaattaagttaaaaaggtaaaacacaacatatttt 12108471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 442
Target Start/End: Complemental strand, 13811009 - 13810905
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  |||| ||||||||||| |||||||   | |||||||||||||||| ||||||||||| ||   | |||||||||||| ||||| |||    
T  13811009 taggggtgttcgcggtgaggtttggtttggttttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatacggtttggtttggttcagttgatttt 13810910  T
Q  438 taaaa 442  Q
    |||||    
T  13810909 taaaa 13810905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 454
Target Start/End: Complemental strand, 32190790 - 32190694
Alignment:
Q  358 tttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaac 454  Q
    ||||||| ||||||||||| | ||||||||  ||||| | |||||||||  |||| | |||||||| || |||| |||||||||||||| |||||||    
T  32190790 tttggttcgattttgaggctaaaagtcatctgaaccgtatgataaaaaaacatgaggtttggtttgatttggttaacttttaaaataaaatccaaac 32190694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 5288031 - 5287940
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||| | |||||||    |||||||||||||| || ||||||| ||  ||| || |||||||||||||||||| ||||||||    
T  5288031 ggtgcggtttggttcggttttgagcatttaagtcatccaaactgcgagataaataaacatgcagtttggtttggttcggttgatttttaaaa 5287940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 444
Target Start/End: Complemental strand, 25006419 - 25006365
Alignment:
Q  390 aaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaata 444  Q
    ||||| ||||||||||||||||  |||||||||||||| |||| |||||||||||    
T  25006419 aaccgtaagataaaaaagtatgtgggttggtttggttcagttggcttttaaaata 25006365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 562
Target Start/End: Complemental strand, 31945551 - 31945337
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||| |||||| || | ||||||||  | ||||||||| ||||| ||||||||||||||||      | ||||||||||||||||||||||||||| ||     
T  31945551 ggtgtggtttgtttcggttttgaggttaaaagtcatccgaaccgtaagataaaaaagtatgc-----gttttggttcggttgacttttaaaataaaatca 31945457  T
Q  451 aaaccaaa----------gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaa 540  Q
    ||| ||||          |||||||| |||||||||| |  ||||| ||||||  |  ||||| | | |||||||||||| || ||||| || |||||||    
T  31945456 aaatcaaaccaatccaatgcggtttggattggatcgggttgtgcggttttttttaaa-caata-atttttttgtttccaatattaaaatcaaattaaaaa 31945359  T
Q  541 actaaaacacaacatattttta 562  Q
     |||||||||||||||||||||    
T  31945358 gctaaaacacaacatattttta 31945337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 540
Target Start/End: Complemental strand, 32190684 - 32190591
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatctttt--gtttccaacatcaaaattaagttaaaaa 540  Q
    |||||| || || |||||| |||||||||||| ||||| ||||||| |  ||||||||| ||||   |||||||||| ||||||||||||||||    
T  32190684 ccaaacaaatgcagtttgagttggatcggttggtgcggtttttttcaaaacaatacaatttttttaatttccaacattaaaattaagttaaaaa 32190591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 5874247 - 5874188
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  5874247 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 5874188  T

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Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 458
Target Start/End: Original strand, 6266859 - 6266966
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattcc 450  Q
    |||||||||||||  | ||||||||  |  |||||||| ||||| || ||||||||  |||  | |||||||||| ||||||||||||||||| ||  ||    
T  6266859 ggtgcggtttggtacggttttgaggttaatagtcatccgaaccgtaaaataaaaaaacatgcggtttggtttggtacggttgacttttaaaatgaaaacc 6266958  T
Q  451 aaaccaaa 458  Q
    ||||||||    
T  6266959 aaaccaaa 6266966  T

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Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 12270544 - 12270603
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  12270544 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 12270603  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 562
Target Start/End: Original strand, 8135540 - 8135593
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattttta 562  Q
    |||| ||||||| || |||||||| |||||||  ||||||||||||||||||||    
T  8135540 ttttttttccaatattaaaattaaattaaaaagttaaaacacaacatattttta 8135593  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 519 - 599
Target Start/End: Original strand, 4577220 - 4577300
Alignment:
Q  519 aacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||| |||||  |||||||||  || ||||||||||||||  |  ||| ||||| |||||||||| ||||||||||||||    
T  4577220 aacattaaaatcgagttaaaaacttataacacaacatatttccaataatgtttccgacaatgttttcaatttcatccaaca 4577300  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 8135378 - 8135442
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataa 402  Q
    |||||||||||  |||||| ||||||| | ||||||||| | ||||||||| |||||||||||||    
T  8135378 taggggtgttcgcggtgcgttttggttcggttttgaggctaaaagtcatccgaaccgcaagataa 8135442  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 458
Target Start/End: Complemental strand, 29129044 - 29128976
Alignment:
Q  390 aaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaa 458  Q
    |||||||| ||||||||| ||| || ||| |||| ||| ||||| |||||||||||| ||| |||||||    
T  29129044 aaccgcaatataaaaaagcatgtagtttgatttgattccgttgatttttaaaataaaatccgaaccaaa 29128976  T

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Target: chr7 (Bit Score: 60; Significance: 3e-25; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 347 - 446
Target Start/End: Complemental strand, 26215255 - 26215156
Alignment:
Q  347 ttctggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||||||||||||| ||||||||  | ||||||||||||||||||||||| |||| ||   |||| ||||||||||||||||||||||||||||    
T  26215255 ttctggtgcggtttggtttggttttgaggttaaaagtcatccaaaccgcaagataataaagcatacgggtttgtttggttcggttgacttttaaaataaa 26215156  T

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Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 488 - 593
Target Start/End: Original strand, 43202533 - 43202638
Alignment:
Q  488 ttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaa 587  Q
    |||||||||  ||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||| | |||  ||||| ||||| |||| ||    
T  43202533 ttttttcgagacaatacaattttttgtttccaacattaaaattaagttaaaaaagtaaaacacaacatattttcatcaacgtttcccacaatatttttaa 43202632  T
Q  588 tttcat 593  Q
    ||||||    
T  43202633 tttcat 43202638  T

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Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 599
Target Start/End: Complemental strand, 26524910 - 26524810
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaac 598  Q
    |||| |||| || |||||||||||| ||||| |||||||||| |||||||||||||||||| ||||||| ||| | |||||||||| |||||||||||||    
T  26524910 caatgcaattttctgtttccaacattaaaataaagttaaaaagctaaaacacaacatatttctagcaatgttttcgacaatgtttttaatttcatccaac 26524811  T
Q  599 a 599  Q
    |    
T  26524810 a 26524810  T

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Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 385 - 567
Target Start/End: Complemental strand, 8118373 - 8118187
Alignment:
Q  385 atccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattc-----caaaccaaagcggtttgaattggatcggtt 479  Q
    |||| |||||||||||||||||| |||  | |||||||||||||||||| ||| |||||||| ||     |||||||| |  |||||  |||||||||||    
T  8118373 atccgaaccgcaagataaaaaagcatgtggtttggtttggttcggttgattttaaaaataaaatctgaaccaaaccaatgttgtttgggttggatcggtt 8118274  T
Q  480 gatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaat 567  Q
      ||||| ||| |||||  | ||| ||| |||||||| |||||| ||||| |||||||||| || |||||||||||||||| ||||||    
T  8118273 agtgcgg-tttgttcgagacgatataattttttgttttcaacattaaaatcaagttaaaaagctgaaacacaacatattttcagcaat 8118187  T

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Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 351 - 446
Target Start/End: Complemental strand, 8568681 - 8568586
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||||||| | ||||||||  | ||||||||| |||||||||||||| |||||||  | |||||| ||||||||||||||||||||||||    
T  8568681 ggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaataagtatgcggtttggttcggttcggttgacttttaaaataaa 8568586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 352 - 593
Target Start/End: Original strand, 23032630 - 23032886
Alignment:
Q  352 gtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt--- 448  Q
    |||||||||||||   | ||||||| | ||||||||  ||||| ||||||||||||||||  | || |||||||||||||||||||||||||||| |       
T  23032630 gtgcggtttggttcagtgttgaggctaaaagtcatctgaaccgaaagataaaaaagtatgtggtttagtttggttcggttgacttttaaaataaaatttg 23032729  T
Q  449 ------------ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaataca-atcttttgtttccaacatcaaaattaagtt 535  Q
                ||||||||| | |||||| ||||||||||||||| |  |||||| |||  |||||||  | |||||||| |||||| |||||| ||||    
T  23032730 aaccaaaccaaaccaaaccaatgaggtttggattggatcggttgatac-tgtttttgcgagacaatacattttttttgttttcaacatgaaaattcagtt 23032828  T
Q  536 aaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcat 593  Q
    |||||  |||||||||||||||||  ||||||| |||| ||||| |||| ||||||||    
T  23032829 aaaaaggtaaaacacaacatatttccagcaatacttccgacaatatttttaatttcat 23032886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 450 - 567
Target Start/End: Complemental strand, 30079605 - 30079490
Alignment:
Q  450 caaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaaca 549  Q
    |||||||| ||||||||  |||||||||||| ||||| |||||| || |  ||||||| ||||||||||||||| ||||| || ||||||| ||||||||    
T  30079605 caaaccaatgcggtttgggttggatcggttggtgcggtttttttagacg--atacaattttttgtttccaacattaaaatcaacttaaaaagctaaaaca 30079508  T
Q  550 caacatatttttagcaat 567  Q
    ||| ||||||| ||||||    
T  30079507 caatatattttcagcaat 30079490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 451 - 560
Target Start/End: Original strand, 37375389 - 37375497
Alignment:
Q  451 aaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacac 550  Q
    ||||||| ||||||||  ||| |||||||| ||||| |||||||||| | ||||||| ||||||||||||||| ||||| ||||||||||  | ||||||    
T  37375389 aaaccaatgcggtttgggttgaatcggttggtgcgg-ttttttcgatacgatacaattttttgtttccaacattaaaatcaagttaaaaattttaaacac 37375487  T
Q  551 aacatatttt 560  Q
    ||||||||||    
T  37375488 aacatatttt 37375497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 351 - 442
Target Start/End: Complemental strand, 27054859 - 27054768
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||||| |||||||   | |||||||||||||||| ||||||||||| |||  | |||||||||||||||||| ||||||||    
T  27054859 ggtgcggtttggtttggttttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaa 27054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 350 - 445
Target Start/End: Complemental strand, 31287907 - 31287812
Alignment:
Q  350 tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataa 445  Q
    |||||| | |||||||||||||||||| |  |||||||  ||||| |||||||| |||||||  | ||||||||||||||||||||||||||||||    
T  31287907 tggtgcagcttggtttgattttgaggctaatagtcatctgaaccgtaagataaataagtatgcggtttggtttggttcggttgacttttaaaataa 31287812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 559
Target Start/End: Complemental strand, 29211663 - 29211554
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    ||||||||| || | |||| |||||||||||| ||||| |||||||||  ||||||||| |||||||| |||||| |||||  |||||||||| ||||||    
T  29211663 ccaaaccaatgcaggttgagttggatcggttggtgcgg-ttttttcgaaacaatacaattttttgtttgcaacattaaaatatagttaaaaaagtaaaac 29211565  T
Q  549 acaacatattt 559  Q
    |||| ||||||    
T  29211564 acaatatattt 29211554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 593
Target Start/End: Complemental strand, 524954 - 524748
Alignment:
Q  390 aaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattccaaaccaaa-----gcggtttgaattggatcggttgatgc 484  Q
    ||||||||||||||||| ||||  | |||||||| |||| ||||||||||||||||| |||||||||||      || ||||  |||||| ||||| |||    
T  524954 aaccgcaagataaaaaaatatgcggtttggtttgattcgattgacttttaaaataaaatccaaaccaaaccaattcgatttgggttggataggttggtgc 524855  T
Q  485 gggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgtttt 584  Q
      | ||||||||  ||||||||| |||| ||| |||||| |||||| |||||| ||  |||| ||||||||||||  ||||||  |||| ||||||||||    
T  524854 -agctttttcgagacaatacaattttttattttcaacattaaaattgagttaagaaggtaaagcacaacatatttccagcaat-gttccgacaatgtttt 524757  T
Q  585 aaatttcat 593  Q
      |||||||    
T  524756 ttatttcat 524748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 469 - 593
Target Start/End: Complemental strand, 26215106 - 26214982
Alignment:
Q  469 ttggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaata 568  Q
    ||||||| |||| || || ||||| | || ||||| ||| ||||||||||||||| ||||| || |||||||  |||||||||||||||||  | ||||     
T  26215106 ttggatcagttggtgtggttttttaccattcaatataattttttgtttccaacattaaaatcaaattaaaaaggtaaaacacaacatatttccatcaatg 26215007  T
Q  569 tttccaacaatgttttaaatttcat 593  Q
    ||||| |||||||||| ||||||||    
T  26215006 tttccgacaatgtttttaatttcat 26214982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 589
Target Start/End: Original strand, 29628050 - 29628304
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  |||||||||||||| | ||||||||  | |||  |||| ||||||||| |||||||  |||  | ||| |||||||||| ||| |||    
T  29628050 taggggtgttcgcggtgcggtttggttcggttttgaggtgaaaaggtatccgaaccgcaaggtaaaaaaacatgcggtttgatttggttcggctgaattt 29628149  T
Q  438 taaaataaattc-----caaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaa 532  Q
    ||||||||| |      |||||||| | ||||||  |||||||||||| ||||  |||||||||  ||||||||| ||||||||||||||| ||||   |    
T  29628150 taaaataaaatttgaatcaaaccaatgtggtttgggttggatcggttggtgcga-ttttttcgagacaatacaattttttgtttccaacattaaaaccga 29628248  T
Q  533 gttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatt 589  Q
    ||||||||  |||||||  |||| |||| |||||| ||| | |||||||||| ||||    
T  29628249 gttaaaaaggtaaaacatgacat-ttttcagcaatgttttcgacaatgtttttaatt 29628304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 503 - 599
Target Start/End: Complemental strand, 21237745 - 21237648
Alignment:
Q  503 acaatcttttgtttccaacatcaaaattaagttaaaaaactaaaa-cacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    ||||| |||||||| |||||| ||||| ||||||||||| | | | ||||||||||||| |||||| ||| | |||||||||| ||||||||||||||    
T  21237745 acaattttttgttttcaacattaaaatcaagttaaaaaaattagagcacaacatattttcagcaatgttttcgacaatgtttttaatttcatccaaca 21237648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 339 - 458
Target Start/End: Complemental strand, 32942219 - 32942099
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  ||||| |||||||| | ||||||||  | ||||||||| ||| |||||||||||||  |||  | |||||||| |||||||||||||    
T  32942219 taggggtgttcgcggtgcagtttggttcggttttgaggttaaaagtcatccgaactgcaagataaaaaaacatgcggtttggtttgattcggttgacttt 32942120  T
Q  438 taaaataaattccaaaccaaa 458  Q
    ||||||| | ||| |||||||    
T  32942119 taaaatacaatccgaaccaaa 32942099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 380 - 529
Target Start/End: Original strand, 46147200 - 46147359
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaatt----------ccaaaccaaagcggtttgaat 469  Q
    |||||||| |||||| ||| |||||||| |||  | ||||||||||| ||||||||||||||||||| |          ||||||||| |||||||   |    
T  46147200 aagtcatctaaaccgtaaggtaaaaaagcatgcggattggtttggtttggttgacttttaaaataaaatctgaaccaaaccaaaccaatgcggtttacgt 46147299  T
Q  470 tggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaat 529  Q
    ||||||||||| ||||  |||||||||  ||||||||| ||||||||||| ||| |||||    
T  46147300 tggatcggttggtgcgatttttttcgagacaatacaattttttgtttccatcattaaaat 46147359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 599
Target Start/End: Original strand, 20306704 - 20306815
Alignment:
Q  488 ttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaa 587  Q
    ||||||||| ||||| |||| |||| |||||||| | |||||  |||||||||   ||||||||||||||||| | |||| ||| ||||||| |||| ||    
T  20306704 ttttttcgaggcaatgcaattttttatttccaacttgaaaatcgagttaaaaagtaaaaacacaacatattttcaacaatgttttcaacaatatttttaa 20306803  T
Q  588 tttcatccaaca 599  Q
    ||||| ||||||    
T  20306804 tttcaaccaaca 20306815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 499 - 600
Target Start/End: Original strand, 33434229 - 33434333
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagtta---aaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatcc 595  Q
    |||||||||  |||||||||||||| ||||| ||||||   |||| |||||| ||||||| |||  || ||| ||||| |||||||||||||||| ||||    
T  33434229 caatacaattatttgtttccaacattaaaatcaagttattaaaaacctaaaaaacaacatgtttcgagtaatgtttcccacaatgttttaaattttatcc 33434328  T
Q  596 aacaa 600  Q
    |||||    
T  33434329 aacaa 33434333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 560
Target Start/End: Complemental strand, 6880110 - 6880009
Alignment:
Q  459 gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatt 558  Q
    ||||||||  ||||||||||| | |||  |||| ||||  ||||||||| |||||||| |||| | ||||| ||||||||||  ||||||||||||||||    
T  6880110 gcggtttgggttggatcggtttaagcgatttttgtcgagacaatacaattttttgttttcaaccttaaaatcaagttaaaaagttaaaacacaacatatt 6880011  T
Q  559 tt 560  Q
    ||    
T  6880010 tt 6880009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 556
Target Start/End: Complemental strand, 27215164 - 27215107
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacata 556  Q
    ||||||||| ||||||||||||||| |||||| |||||||||  ||||||||||||||    
T  27215164 caatacaattttttgtttccaacattaaaattgagttaaaaagttaaaacacaacata 27215107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 543 - 599
Target Start/End: Original strand, 2734490 - 2734546
Alignment:
Q  543 taaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    |||||||||||||||||| | |||| ||||| |||||| ||||||||||||||||||    
T  2734490 taaaacacaacatattttcaacaatgtttccgacaatgctttaaatttcatccaaca 2734546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 593
Target Start/End: Original strand, 11399187 - 11399329
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    |||||| || ||||||||  |||||||||||| ||||| |||||| ||  ||| ||||| |||| ||| ||| || | |||  |||||||||  ||||||    
T  11399187 ccaaacaaatgcggtttgggttggatcggttggtgcggttttttt-gagacaacacaattttttattttcaaaattataatcgagttaaaaaggtaaaac 11399285  T
Q  549 acaacatatttttagcaatatttccaacaatgttttaaatttcat 593  Q
    |||||||||||| |||||   |||| |||||||||||||||||||    
T  11399286 acaacatattttgagcaa-ggttccgacaatgttttaaatttcat 11399329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 458
Target Start/End: Complemental strand, 35820215 - 35820107
Alignment:
Q  350 tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattc 449  Q
    |||||||||  |||| ||||||||||| | |  |||||  ||||| ||| | ||||||||||  | ||| ||||||||||||||||||||||||||| ||    
T  35820215 tggtgcggtgcggttcgattttgaggctaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatc 35820116  T
Q  450 caaaccaaa 458  Q
    | |||||||    
T  35820115 cgaaccaaa 35820107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 599
Target Start/End: Original strand, 47483730 - 47483830
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaac 598  Q
    |||||| || |||||||| |||||| |||||  |||||||||| |   |||||||||||||  | | || ||||||||||| ||||||||||||||||||    
T  47483730 caatacgattttttgttttcaacattaaaatcgagttaaaaaattgttacacaacatatttccaaccatgtttccaacaatattttaaatttcatccaac 47483829  T
Q  599 a 599  Q
    |    
T  47483830 a 47483830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 12117587 - 12117646
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| ||| || |||||||||||||||||| ||||||||    
T  12117587 tcatccaaaccgcgagagaaaaaagcatgcagtttggtttggttcggttgatttttaaaa 12117646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 355 - 446
Target Start/End: Original strand, 23729347 - 23729438
Alignment:
Q  355 cggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||||||||  ||||||| || | || |||||| |||||||||||||||||| |||  | |||||||   |||||||||||||||||||||    
T  23729347 cggtttggttcaattttgatgctaaaaatcatccgaaccgcaagataaaaaagcatgcggtttggtttaactcggttgacttttaaaataaa 23729438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 47903235 - 47903294
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||||||||||| |||  | |||||||||||||||||| ||||||||    
T  47903235 tcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaa 47903294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 13852293 - 13852355
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| || ||||||||||| |||  | |||||||||||||||||| ||||||||    
T  13852293 aagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaa 13852355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 446
Target Start/End: Original strand, 20334568 - 20334634
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||| ||| |||||||||||||| || ||||  | |||||||||||||||||||||| ||||||||    
T  20334568 aagtcgtccgaaccgcaagataaataaatatgcggtttggtttggttcggttgactttaaaaataaa 20334634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 31876728 - 31876666
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||||| | ||||||||| ||| || |||||| ||||||||||| ||||||||    
T  31876728 aagtcatccaaaccgcgaaataaaaaagcatgcagtttggttcggttcggttgatttttaaaa 31876666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 31983094 - 31983032
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||| ||||||||||| |||||||||| |||| || |||||||||||| ||||| ||||||||    
T  31983094 aagttatccaaaccgcgagataaaaaaatatgcagtttggtttggttcagttgatttttaaaa 31983032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 458
Target Start/End: Original strand, 40848871 - 40848913
Alignment:
Q  416 ttggtttggttcggttgacttttaaaataaattccaaaccaaa 458  Q
    ||||||||||||||||||||||||||||||| ||| |||||||    
T  40848871 ttggtttggttcggttgacttttaaaataaaatccgaaccaaa 40848913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 572
Target Start/End: Complemental strand, 2308075 - 2308002
Alignment:
Q  499 caatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttc 572  Q
    ||||||||| |||||||| |||||| |||||  | |||||||  || |||||||||||||| ||||||||||||    
T  2308075 caatacaattttttgtttgcaacattaaaatcgaattaaaaagttataacacaacatatttctagcaatatttc 2308002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 339 - 493
Target Start/End: Complemental strand, 10338950 - 10338786
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  ||||| |||||||||| ||||||||  | ||||||||||||| |||| ||||| ||||||   | ||  ||||||||| ||||||||    
T  10338950 taggggtgttcgcggtgcagtttggtttggttttgagggta-aagtcatccaaactgcaaaataaataagtatttggttttatttggttcgattgacttt 10338852  T
Q  438 taaaataaatt-----ccaaaccaaa-----gcggtttgaattggatcggttgatgcgggtttttt 493  Q
    ||||||||| |     ||||||||||      ||||||| ||||||||||||||||||| ||||||    
T  10338851 taaaataaaatctgaaccaaaccaaatcaattcggtttggattggatcggttgatgcggttttttt 10338786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 353 - 446
Target Start/End: Original strand, 34750945 - 34751038
Alignment:
Q  353 tgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||||||||||   |||| |||| | ||||||| | || ||||| ||| |||||||||  ||||||||||||| |||||| ||||||||||||    
T  34750945 tgcggtttggttcagtttttaggctaaaagtcattcgaatcgcaatatataaaagtatgcgggttggtttggtttggttgatttttaaaataaa 34751038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 449 - 593
Target Start/End: Original strand, 40848919 - 40849062
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatctttt-gtttccaacatcaaaattaagttaaaaaactaaaa 547  Q
    |||||| || ||||||||  ||| |||||||| ||||| |||||| |   ||||||||| |||| |||| |||||| |||||  |||||||||  |||||    
T  40848919 ccaaactaatgcggtttgggttgaatcggttggtgcggtttttttggga-caatacaatttttttgttttcaacattaaaatcgagttaaaaagataaaa 40849017  T
Q  548 cacaacatatttttagcaatatttccaacaatgttttaaatttcat 593  Q
    ||||||||||||  |||||| ||| | |||||||||| ||||||||    
T  40849018 cacaacatatttccagcaatgttt-cgacaatgtttttaatttcat 40849062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 509 - 561
Target Start/End: Complemental strand, 27100977 - 27100925
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattttt 561  Q
    ||||||||||||||| ||||| || ||||||| |||||||||| |||||||||    
T  27100977 ttttgtttccaacattaaaatcaaattaaaaatctaaaacacagcatattttt 27100925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 509 - 561
Target Start/End: Original strand, 27177326 - 27177378
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattttt 561  Q
    ||||||||||||||| ||||| || ||||||| |||||||||| |||||||||    
T  27177326 ttttgtttccaacattaaaatcaaattaaaaatctaaaacacagcatattttt 27177378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 528
Target Start/End: Complemental strand, 32942093 - 32942013
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggtttttt-cgatgcaatacaatcttttgtttccaacatcaaaa 528  Q
    ||||||||| | ||||||| |||||||| ||| ||||| |||||| |||  ||||||||| ||||||||||||||| ||||    
T  32942093 ccaaaccaatgtggtttgagttggatcgattggtgcggttttttttcgagacaatacaattttttgtttccaacattaaaa 32942013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 3213317 - 3213258
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  3213317 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 3213258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 8769058 - 8768999
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  8769058 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 8768999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 10671808 - 10671867
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  10671808 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 10671867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 559
Target Start/End: Original strand, 41459273 - 41459344
Alignment:
Q  488 ttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattt 559  Q
    |||||||||  |||||| | |||||||||||||||| |||||  ||||||||  ||||| ||||||||||||    
T  41459273 ttttttcgagacaatacgaccttttgtttccaacattaaaatcgagttaaaaggctaaagcacaacatattt 41459344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 47069656 - 47069715
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  47069656 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 47069715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Complemental strand, 47204552 - 47204493
Alignment:
Q  383 tcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    ||||||||||||| ||| ||||||| |||  | |||||||||||||||||| ||||||||    
T  47204552 tcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 47204493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 7209367 - 7209305
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||| | ||||||||||| ||   | |||||||||||||||||| ||||||||    
T  7209367 aagtcatccaaaccacgagataaaaaagcatacggtttggtttggttcggttgatttttaaaa 7209305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 43429160 - 43429222
Alignment:
Q  380 aagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||||| ||||||||| | | |  | |||||||||||||||||| ||||||||    
T  43429160 aagtcatccaaaccgcgagataaaaatgcacgcggtttggtttggttcggttgatttttaaaa 43429222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 540
Target Start/End: Complemental strand, 1033028 - 1032947
Alignment:
Q  459 gcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaa 540  Q
    |||||||||||| | ||||||| || || |||||  ||  | ||||||| ||||||| | ||||||||||||||||||||||    
T  1033028 gcggtttgaatttgttcggttgttgtggttttttatgacacgatacaattttttgttacaaacatcaaaattaagttaaaaa 1032947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 567
Target Start/End: Original strand, 30855207 - 30855272
Alignment:
Q  503 acaatcttttgtttccaacatcaaaatt-aagttaaaaaactaaaacacaacatatttttagcaat 567  Q
    ||||| |||||||| |||||| |||| | |||||||||||||  ||||||||||||||| ||||||    
T  30855207 acaattttttgttttcaacattaaaaatcaagttaaaaaactggaacacaacatattttcagcaat 30855272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 566
Target Start/End: Complemental strand, 31287729 - 31287672
Alignment:
Q  509 ttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaa 566  Q
    ||||||||||||||| ||||| || |||||||  |||| ||||||||||||| |||||    
T  31287729 ttttgtttccaacattaaaatcaaattaaaaagttaaaccacaacatattttcagcaa 31287672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 446
Target Start/End: Original strand, 7697283 - 7697334
Alignment:
Q  394 gcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||| |||||||||  |||||||||||||| ||||| ||||||||||||    
T  7697283 gcaagatacaaaagtatgt-ggttggtttggttctgttgaattttaaaataaa 7697334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 503 - 559
Target Start/End: Original strand, 23675492 - 23675548
Alignment:
Q  503 acaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatattt 559  Q
    ||||| |||| ||| |||| | |||||| ||||||||||||||||||||| ||||||    
T  23675492 acaattttttattttcaacgttaaaattgagttaaaaaactaaaacacaatatattt 23675548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 23707187 - 23707135
Alignment:
Q  394 gcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaa 446  Q
    ||||||||||||||||||  | |||||||| ||| ||||||| ||||||||||    
T  23707187 gcaagataaaaaagtatgcggtttggtttgattctgttgactcttaaaataaa 23707135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 444
Target Start/End: Original strand, 43202449 - 43202477
Alignment:
Q  416 ttggtttggttcggttgacttttaaaata 444  Q
    |||||||||||||||||||||||||||||    
T  43202449 ttggtttggttcggttgacttttaaaata 43202477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 414 - 446
Target Start/End: Complemental strand, 47646784 - 47646752
Alignment:
Q  414 ggttggtttggttcggttgacttttaaaataaa 446  Q
    |||||||||||||||||||| ||||||||||||    
T  47646784 ggttggtttggttcggttgatttttaaaataaa 47646752  T

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Target: scaffold0688 (Bit Score: 56; Significance: 7e-23; HSPs: 4)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 500 - 599
Target Start/End: Original strand, 1277 - 1375
Alignment:
Q  500 aatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    |||||||| |||||||| |||||| ||||| ||||||| |||||||||||||||||||||  |||||| |||| ||||||||||||||||||||| ||||    
T  1277 aatacaattttttgttttcaacattaaaat-aagttaataaactaaaacacaacatatttccagcaatgtttcaaacaatgttttaaatttcatcgaaca 1375  T

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Target: scaffold0688; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 500 - 599
Target Start/End: Original strand, 7846 - 7944
Alignment:
Q  500 aatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacatatttttagcaatatttccaacaatgttttaaatttcatccaaca 599  Q
    |||||||| |||||||| |||||| ||||| ||||||| |||||||||||||||||||||  |||||| |||| ||||||||||||||||||||| ||||    
T  7846 aatacaattttttgttttcaacattaaaat-aagttaataaactaaaacacaacatatttccagcaatgtttcaaacaatgttttaaatttcatcgaaca 7944  T

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Target: scaffold0688; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 406
Target Start/End: Original strand, 1119 - 1169
Alignment:
Q  356 ggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaa 406  Q
    ||||||||| | ||||||||| | ||||||||| |||||||||||||||||    
T  1119 ggtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaaaaa 1169  T

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Target: scaffold0688; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 356 - 406
Target Start/End: Original strand, 7688 - 7738
Alignment:
Q  356 ggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaa 406  Q
    ||||||||| | ||||||||| | ||||||||| |||||||||||||||||    
T  7688 ggtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaaaaa 7738  T

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Target: scaffold0013 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 339 - 443
Target Start/End: Original strand, 105972 - 106077
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  |||||||||||||| |||||||||   | |||||||||||||||||||||||||||| |||  | |||||||||||||||||| |||    
T  105972 taggggtgttcgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgcaagataaaaaagcatgtggtttggtttggttcggttgatttt 106071  T
Q  438 taaaat 443  Q
    ||||||    
T  106072 taaaat 106077  T

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Target: scaffold0013; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 128592 - 128683
Alignment:
Q  351 ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaa 442  Q
    |||||||||||||| |||||||||   | |||||||||||||||||||||||||||| |||  | |||||||||||| ||||| ||||||||    
T  128592 ggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcaagataaaaaagcatgtggtttggtttggttctgttgatttttaaaa 128683  T

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Target: scaffold0059 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 442
Target Start/End: Complemental strand, 69680 - 69576
Alignment:
Q  339 taggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttt 437  Q
    |||||||||||  |||||||||||||| |||||||||   | |||||||||||||||| ||||||||||| |||  | |||||||||||||||||| |||    
T  69680 taggggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtggtttggtttggttcggttgatttt 69581  T
Q  438 taaaa 442  Q
    |||||    
T  69580 taaaa 69576  T

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Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 350 - 458
Target Start/End: Original strand, 62354 - 62462
Alignment:
Q  350 tggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcggttgacttttaaaataaattc 449  Q
    |||||||||  |||| ||||||||||| | |  |||||  ||||| ||| ||||||||||||  | ||| ||||||||||||||||||||||||||| ||    
T  62354 tggtgcggtgcggttcgattttgaggctaaatttcatctgaaccgtaagctaaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatc 62453  T
Q  450 caaaccaaa 458  Q
    | |||||||    
T  62454 cgaaccaaa 62462  T

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Target: scaffold0664 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 556
Target Start/End: Original strand, 6064 - 6171
Alignment:
Q  449 ccaaaccaaagcggtttgaattggatcggttgatgcgggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaac 548  Q
    ||||||||| ||||||||  |||||||||||  ||| | | || ||||  |||| |||| |||||||| |||||||||||| || ||||||| |||||||    
T  6064 ccaaaccaatgcggtttgggttggatcggtttgtgcagttgttatcgaaacaattcaattttttgtttacaacatcaaaatcaaattaaaaagctaaaac 6163  T
Q  549 acaacata 556  Q
     |||||||    
T  6164 gcaacata 6171  T

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Target: scaffold0470 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 555
Target Start/End: Original strand, 6345 - 6414
Alignment:
Q  486 ggttttttcgatgcaatacaatcttttgtttccaacatcaaaattaagttaaaaaactaaaacacaacat 555  Q
    |||||||| ||  ||||||||| ||||||||||||| | |||||  ||||||||| ||||||||||||||    
T  6345 ggtttttttgagacaatacaattttttgtttccaactttaaaatcgagttaaaaagctaaaacacaacat 6414  T

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Target: scaffold0308 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 442
Target Start/End: Complemental strand, 6031 - 5919
Alignment:
Q  331 attttgattaggggtgttct-ggtgcggtttggtttgattttgaggccataagtcatccaaaccgcaagataaaaaagtatgaaggttggtttggttcgg 429  Q
    |||| ||||||||||||||  |||||||||||||| |||||  ||   |  | ||||||||||||| ||| ||||||| |||  | ||||||||||||||    
T  6031 atttagattaggggtgttcgcggtgcggtttggttcgatttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcgg 5932  T
Q  430 ttgacttttaaaa 442  Q
    |||| ||||||||    
T  5931 ttgatttttaaaa 5919  T

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