View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4412-Insertion-9 (Length: 101)
Name: NF4412-Insertion-9
Description: NF4412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4412-Insertion-9 |
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Alignment Details
Target: chr8 (Bit Score: 78; Significance: 7e-37; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 78; E-Value: 7e-37
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 27065730 - 27065819
Alignment:
| Q |
8 |
cgtttcacctacactcggcgccctctcgcactcactcaacgcatccaccatcattttgttcatcgaagaattctcggacaccttaaaaac |
97 |
Q |
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| T |
27065730 |
cgtttcacctacactcggcgccctctcgcactcactcaacgcatccaccatcatcttattcatcgaagaattctcggacaccttgaaaac |
27065819 |
T |
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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 27079459 - 27079536
Alignment:
| Q |
20 |
actcggcgccctctcgcactcactcaacgcatccaccatcattttgttcatcgaagaattctcggacaccttaaaaac |
97 |
Q |
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| T |
27079459 |
actcggtgccctctcacactcacccaatgagtccactatcatcttatccatcgaggaattctcagacaccttaaaaac |
27079536 |
T |
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