View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4412_high_12 (Length: 241)
Name: NF4412_high_12
Description: NF4412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4412_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 45685167 - 45684955
Alignment:
| Q |
11 |
cacagaaaattgatttatttttgtgacacttcaaaaaatacatggatatatacatttttgaataggataaaaactaaactaatacaagatatcaaacttc |
110 |
Q |
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| T |
45685167 |
cacagaaaattgatttatttttgtgacacttcaaaaaatacatggatatatacatttttgaataggataaaaactaaactaatacaagatatcaaacttc |
45685068 |
T |
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| Q |
111 |
tgtacatatttttatgggcaaactaaagttgtaagattacataattgcaagataattgagatttgttttaggggttgacaaatggttaagggatccatat |
210 |
Q |
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| T |
45685067 |
tgtacatatttttatgggcaaactaaagttgtaagattacataattgcaagataattgagatttgttttaggggttgacaaatggttaagggatccatat |
45684968 |
T |
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| Q |
211 |
atctaccacttgt |
223 |
Q |
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||||||||||||| |
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| T |
45684967 |
atctaccacttgt |
45684955 |
T |
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