View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4412_high_16 (Length: 224)

Name: NF4412_high_16
Description: NF4412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4412_high_16
NF4412_high_16
[»] chr7 (36 HSPs)
chr7 (16-211)||(8061734-8061929)
chr7 (16-97)||(16567316-16567397)
chr7 (16-97)||(16598265-16598346)
chr7 (16-97)||(18157175-18157256)
chr7 (17-97)||(45154531-45154610)
chr7 (16-74)||(4678086-4678144)
chr7 (23-97)||(22692084-22692158)
chr7 (16-94)||(34304668-34304746)
chr7 (20-97)||(4971290-4971367)
chr7 (16-97)||(9031205-9031286)
chr7 (17-74)||(26123390-26123447)
chr7 (16-97)||(26153646-26153726)
chr7 (16-97)||(49147522-49147603)
chr7 (10-97)||(6655599-6655687)
chr7 (26-97)||(25332498-25332570)
chr7 (16-67)||(21588915-21588966)
chr7 (16-67)||(33056648-33056699)
chr7 (20-97)||(20337310-20337388)
chr7 (16-97)||(7990079-7990160)
chr7 (16-97)||(17500697-17500778)
chr7 (16-97)||(17552436-17552517)
chr7 (20-97)||(43079626-43079703)
chr7 (16-97)||(47905106-47905187)
chr7 (16-76)||(29034122-29034182)
chr7 (22-97)||(37392043-37392118)
chr7 (20-97)||(18111605-18111683)
chr7 (16-97)||(40949890-40949972)
chr7 (28-97)||(28824503-28824572)
chr7 (16-97)||(30941178-30941259)
chr7 (16-97)||(31364874-31364955)
chr7 (16-97)||(42467204-42467285)
chr7 (16-97)||(43107610-43107691)
chr7 (28-76)||(5978600-5978648)
chr7 (29-57)||(21023119-21023147)
chr7 (22-94)||(31436422-31436494)
chr7 (16-96)||(34349017-34349097)
[»] scaffold0184 (1 HSPs)
scaffold0184 (16-97)||(16584-16665)
[»] scaffold0078 (1 HSPs)
scaffold0078 (16-97)||(56179-56260)
[»] chr4 (39 HSPs)
chr4 (16-97)||(23094376-23094457)
chr4 (16-97)||(54800998-54801079)
chr4 (16-97)||(18880785-18880866)
chr4 (16-97)||(33438045-33438126)
chr4 (16-97)||(35332706-35332787)
chr4 (20-75)||(44495988-44496043)
chr4 (23-97)||(29694050-29694124)
chr4 (16-97)||(18874912-18874992)
chr4 (16-97)||(42853939-42854020)
chr4 (16-97)||(44272800-44272881)
chr4 (16-95)||(29525860-29525939)
chr4 (16-75)||(52456917-52456976)
chr4 (16-97)||(1688418-1688499)
chr4 (16-97)||(10096732-10096813)
chr4 (16-97)||(12074141-12074222)
chr4 (16-97)||(31804319-31804400)
chr4 (16-65)||(34027928-34027977)
chr4 (28-97)||(36444397-36444466)
chr4 (16-97)||(40755921-40756002)
chr4 (20-97)||(46566929-46567006)
chr4 (29-97)||(50506393-50506462)
chr4 (22-94)||(12694424-12694496)
chr4 (22-97)||(20632644-20632719)
chr4 (16-51)||(28676142-28676177)
chr4 (22-97)||(30866353-30866428)
chr4 (23-94)||(40308444-40308515)
chr4 (22-99)||(13182330-13182408)
chr4 (39-97)||(40161715-40161772)
chr4 (16-74)||(42510915-42510973)
chr4 (32-97)||(3475869-3475934)
chr4 (20-57)||(7632455-7632492)
chr4 (16-97)||(16004316-16004397)
chr4 (16-97)||(17363230-17363311)
chr4 (16-97)||(24209777-24209858)
chr4 (16-97)||(24772671-24772752)
chr4 (26-82)||(31574939-31574996)
chr4 (16-97)||(34259815-34259896)
chr4 (16-97)||(51397861-51397942)
chr4 (18-62)||(40847405-40847449)
[»] chr1 (43 HSPs)
chr1 (16-94)||(48576495-48576573)
chr1 (16-97)||(25988974-25989055)
chr1 (16-97)||(27352630-27352711)
chr1 (16-75)||(5043114-5043173)
chr1 (16-102)||(32821630-32821716)
chr1 (16-97)||(43755668-43755749)
chr1 (16-97)||(51168758-51168839)
chr1 (16-97)||(8464503-8464584)
chr1 (16-97)||(30530564-30530645)
chr1 (16-97)||(30687052-30687133)
chr1 (20-97)||(40238438-40238515)
chr1 (16-97)||(50528047-50528128)
chr1 (16-97)||(44730643-44730725)
chr1 (22-97)||(45350091-45350166)
chr1 (21-75)||(11460816-11460870)
chr1 (16-94)||(36930744-36930821)
chr1 (27-97)||(38019505-38019575)
chr1 (16-62)||(48325257-48325303)
chr1 (16-97)||(12708090-12708171)
chr1 (16-97)||(12717635-12717716)
chr1 (16-97)||(18541041-18541122)
chr1 (16-97)||(23554751-23554832)
chr1 (16-97)||(24774975-24775056)
chr1 (16-97)||(25098778-25098859)
chr1 (16-97)||(46003468-46003549)
chr1 (16-97)||(49596235-49596316)
chr1 (17-97)||(16658438-16658518)
chr1 (20-96)||(51037978-51038054)
chr1 (22-97)||(366657-366732)
chr1 (26-97)||(50118896-50118967)
chr1 (16-98)||(25702205-25702287)
chr1 (39-97)||(49645362-49645420)
chr1 (16-97)||(586899-586980)
chr1 (16-97)||(3919300-3919381)
chr1 (16-97)||(14002732-14002812)
chr1 (16-96)||(26839383-26839461)
chr1 (20-57)||(30519618-30519655)
chr1 (20-97)||(34941914-34941991)
chr1 (20-97)||(40605415-40605492)
chr1 (16-96)||(11068426-11068506)
chr1 (32-76)||(33660062-33660106)
chr1 (16-76)||(34173598-34173658)
chr1 (16-96)||(52368670-52368749)
[»] chr8 (25 HSPs)
chr8 (16-97)||(6849251-6849332)
chr8 (16-97)||(12045643-12045724)
chr8 (16-97)||(14548813-14548894)
chr8 (16-97)||(20852919-20853000)
chr8 (16-97)||(33863238-33863319)
chr8 (16-97)||(6004944-6005025)
chr8 (16-97)||(9048306-9048387)
chr8 (16-97)||(27630897-27630978)
chr8 (16-97)||(39021433-39021514)
chr8 (16-97)||(42443104-42443185)
chr8 (16-97)||(44380604-44380685)
chr8 (16-79)||(9046171-9046234)
chr8 (22-97)||(25911188-25911263)
chr8 (22-97)||(29910208-29910283)
chr8 (16-67)||(32234442-32234493)
chr8 (16-62)||(9001004-9001050)
chr8 (16-97)||(33605067-33605149)
chr8 (39-97)||(37873118-37873176)
chr8 (19-97)||(38844784-38844861)
chr8 (20-97)||(45504561-45504639)
chr8 (16-97)||(6161948-6162029)
chr8 (16-97)||(7678732-7678813)
chr8 (22-67)||(9895038-9895083)
chr8 (29-97)||(27055353-27055421)
chr8 (29-65)||(30608711-30608747)
[»] chr6 (20 HSPs)
chr6 (20-97)||(8173306-8173383)
chr6 (16-97)||(3088973-3089054)
chr6 (16-97)||(16743256-16743337)
chr6 (16-97)||(23633313-23633394)
chr6 (16-97)||(32729889-32729970)
chr6 (16-97)||(9188934-9189015)
chr6 (16-97)||(12044332-12044413)
chr6 (18-94)||(34490350-34490426)
chr6 (18-65)||(12186979-12187026)
chr6 (16-97)||(11742972-11743053)
chr6 (16-97)||(11785355-11785436)
chr6 (16-97)||(19789066-19789147)
chr6 (16-97)||(28647425-28647506)
chr6 (29-94)||(29172993-29173058)
chr6 (22-97)||(32253780-32253855)
chr6 (23-97)||(11635617-11635691)
chr6 (20-74)||(23653887-23653941)
chr6 (43-97)||(32881215-32881269)
chr6 (16-97)||(2333365-2333446)
chr6 (18-51)||(12177612-12177645)
[»] chr5 (26 HSPs)
chr5 (16-97)||(7144577-7144658)
chr5 (16-97)||(29803225-29803306)
chr5 (16-69)||(36624346-36624399)
chr5 (16-97)||(582857-582938)
chr5 (16-97)||(5698318-5698399)
chr5 (16-97)||(15639385-15639466)
chr5 (16-97)||(19437257-19437338)
chr5 (22-97)||(5996667-5996742)
chr5 (18-97)||(35098724-35098803)
chr5 (16-97)||(27340869-27340950)
chr5 (16-97)||(28811429-28811509)
chr5 (21-65)||(26627362-26627406)
chr5 (17-97)||(28903991-28904071)
chr5 (17-97)||(28940386-28940466)
chr5 (23-97)||(14914372-14914446)
chr5 (22-76)||(34767411-34767465)
chr5 (16-65)||(91247-91296)
chr5 (16-65)||(11880977-11881026)
chr5 (16-97)||(18638815-18638896)
chr5 (16-65)||(20040820-20040869)
chr5 (16-97)||(33743323-33743404)
chr5 (16-97)||(36572691-36572772)
chr5 (16-97)||(39840699-39840780)
chr5 (16-97)||(41460116-41460197)
chr5 (29-97)||(6538870-6538938)
chr5 (29-97)||(8897382-8897450)
[»] chr3 (52 HSPs)
chr3 (16-97)||(36869827-36869908)
chr3 (16-97)||(43499552-43499632)
chr3 (16-97)||(46315945-46316026)
chr3 (16-97)||(1901916-1901997)
chr3 (16-97)||(1911362-1911443)
chr3 (16-97)||(34607910-34607991)
chr3 (16-97)||(462391-462472)
chr3 (16-97)||(1295332-1295413)
chr3 (16-97)||(7867701-7867782)
chr3 (16-97)||(18181443-18181524)
chr3 (16-97)||(32795830-32795911)
chr3 (16-97)||(35376541-35376622)
chr3 (22-94)||(37035618-37035691)
chr3 (16-97)||(45150256-45150337)
chr3 (16-97)||(47773965-47774046)
chr3 (16-79)||(16139285-16139348)
chr3 (26-97)||(55344296-55344367)
chr3 (16-97)||(275226-275307)
chr3 (29-98)||(9027872-9027941)
chr3 (16-97)||(29705903-29705984)
chr3 (16-97)||(31326710-31326791)
chr3 (16-97)||(32981111-32981192)
chr3 (16-97)||(43900747-43900828)
chr3 (16-97)||(45517647-45517728)
chr3 (16-97)||(45528932-45529013)
chr3 (20-79)||(3648597-3648657)
chr3 (26-97)||(33374492-33374564)
chr3 (32-96)||(40419648-40419712)
chr3 (29-97)||(51410806-51410874)
chr3 (22-97)||(7210-7285)
chr3 (18-97)||(8868872-8868951)
chr3 (20-79)||(25959536-25959595)
chr3 (22-97)||(36799398-36799473)
chr3 (22-97)||(37134602-37134677)
chr3 (18-97)||(43409354-43409433)
chr3 (22-97)||(52678573-52678648)
chr3 (16-82)||(41717465-41717531)
chr3 (16-97)||(11335292-11335373)
chr3 (16-97)||(14957836-14957917)
chr3 (16-97)||(20549375-20549456)
chr3 (16-97)||(26668842-26668923)
chr3 (16-97)||(28300286-28300367)
chr3 (20-97)||(28625274-28625351)
chr3 (16-65)||(34208299-34208348)
chr3 (16-97)||(43333660-43333741)
chr3 (16-97)||(44334791-44334872)
chr3 (32-97)||(50280093-50280158)
chr3 (16-68)||(12044744-12044796)
chr3 (16-96)||(18713604-18713684)
chr3 (29-97)||(44910697-44910765)
chr3 (26-54)||(51465742-51465770)
chr3 (29-97)||(54134852-54134919)
[»] chr2 (43 HSPs)
chr2 (16-97)||(8352835-8352916)
chr2 (16-97)||(1052486-1052567)
chr2 (16-97)||(28165129-28165210)
chr2 (29-96)||(9202519-9202586)
chr2 (19-97)||(30856807-30856885)
chr2 (16-74)||(36763514-36763572)
chr2 (16-97)||(13553147-13553228)
chr2 (16-97)||(21805776-21805857)
chr2 (26-94)||(16447246-16447314)
chr2 (22-97)||(3959894-3959969)
chr2 (16-62)||(5167730-5167776)
chr2 (19-97)||(15283243-15283321)
chr2 (24-94)||(39454237-39454307)
chr2 (29-98)||(3091740-3091809)
chr2 (16-97)||(7497981-7498062)
chr2 (16-97)||(18508078-18508159)
chr2 (28-97)||(34913092-34913161)
chr2 (20-97)||(37966585-37966661)
chr2 (16-96)||(26321687-26321767)
chr2 (29-97)||(36816419-36816487)
chr2 (18-97)||(42530225-42530305)
chr2 (26-65)||(5606606-5606645)
chr2 (16-62)||(8555281-8555327)
chr2 (16-62)||(11741858-11741904)
chr2 (16-98)||(18619387-18619469)
chr2 (20-97)||(21738609-21738687)
chr2 (16-98)||(42554775-42554857)
chr2 (16-97)||(5954473-5954554)
chr2 (16-97)||(10288150-10288231)
chr2 (16-97)||(10749669-10749750)
chr2 (16-97)||(12208442-12208523)
chr2 (16-65)||(16051407-16051456)
chr2 (18-63)||(19668177-19668222)
chr2 (20-65)||(23358573-23358618)
chr2 (16-97)||(35792446-35792527)
chr2 (30-75)||(36180525-36180570)
chr2 (22-75)||(36795752-36795805)
chr2 (16-65)||(42251910-42251959)
chr2 (16-97)||(42665802-42665883)
chr2 (21-65)||(4842515-4842559)
chr2 (20-76)||(6742404-6742460)
chr2 (32-96)||(26321871-26321935)
chr2 (22-94)||(35965578-35965650)
[»] scaffold0154 (1 HSPs)
scaffold0154 (16-97)||(4315-4396)
[»] scaffold0003 (1 HSPs)
scaffold0003 (16-97)||(337118-337199)
[»] scaffold0024 (1 HSPs)
scaffold0024 (23-97)||(60469-60543)
[»] scaffold0002 (2 HSPs)
scaffold0002 (16-97)||(440718-440799)
scaffold0002 (16-97)||(6427-6508)
[»] scaffold0020 (1 HSPs)
scaffold0020 (16-97)||(155906-155987)


Alignment Details
Target: chr7 (Bit Score: 164; Significance: 8e-88; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 8061734 - 8061929
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctcgagttataattgagccta 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  8061734 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaatttttcataaaatggttgtagaaatatcatttctcgagttataattgagccta 8061833  T
Q  116 aggcttttgtatctttgttttacttttcctgtgtactgcttgttctactattctagtcggctcaacacttgcgacgactccatccacactaaaaat 211  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  8061834 aggcttttgtatctttgttctatttttcctgtgtactgcttgttcttcttttctagtcggctcaacacttgcgacgactccatccacactaaaaat 8061929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 16567397 - 16567316
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| |||||||||||||||| || ||||||||| ||||||||||| || ||| ||||||||||    
T  16567397 agagaataagaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcatttctc 16567316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 16598265 - 16598346
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| |||||||||||||||| || ||||||||| ||||||||||| || ||| ||||||||||    
T  16598265 agagaataagaatataatgtgagtatgaaagagaaaattgtcaaaaagttataataaaatggttgtacaaatatcatttctc 16598346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 18157175 - 18157256
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||| |||||| ||| ||||| || ||| ||||| ||||    
T  18157175 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaaattatcacaaagtggttgtacaaatatcatgtctc 18157256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 45154531 - 45154610
Alignment:
Q  17 gagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||| ||| || ||| ||||||||||    
T  45154531 gagattaagaatataatgtgagtatgaaagagaaagttatctaaaagttgtca-aaaatagttgtacaaatatcatttctc 45154610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 4678144 - 4678086
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaa 74  Q
    |||||||||||||||||||||| ||||| |||||||||| |||||||||| ||| ||||    
T  4678144 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaagttgtcaaaaaa 4678086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 22692158 - 22692084
Alignment:
Q  23 aagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||| | ||||| |||||||||| | |||||||| ||||||||||||| || ||| ||||||||||    
T  22692158 aagaatataatgtaagtatgagagagaaaattgtttaaaagttgtcataaaatggttgtacaaatatcatttctc 22692084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 34304668 - 34304746
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcattt 94  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||| || ||| ||||| ||| || ||| |||||||    
T  34304668 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaaattgtcaaaaaatagttgtacaaatatcattt 34304746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 4971367 - 4971290
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||| ||||| ||||||| || | |||||||| ||| ||||||||| || ||| ||||||||||    
T  4971367 agtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcatttctc 4971290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 9031286 - 9031205
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||| || | | |||||| || || ||| ||||||||||    
T  9031286 agagagtaagaatataacgtgagtatgagagagaaaattatctaaaaattgtaacaaaatgtttgtacaaatatcatttctc 9031205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 26123447 - 26123390
Alignment:
Q  17 gagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaa 74  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||||| ||| ||||    
T  26123447 gagagtaagaatataatgtgaatatgagagagaaagttgtctaaaagttgtcaaaaaa 26123390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 26153726 - 26153646
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| |||||||||| || ||||||| ||||||||| ||| || ||| ||||||||||    
T  26153726 agagaataagaatataatgtgagtatgagagagaaaattgtc-aaaagttgtcataaaatagttgtacaaatatcatttctc 26153646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 49147603 - 49147522
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||| ||||||||||||||||||||||||||||  |||| || ||| ||||||  |||| ||| ||||||||||    
T  49147603 agagaataagaagataatgtgaatatgaaagagaaaattattaaaaatttgtcacaaaatgaatatataaatatcatttctc 49147522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 6655599 - 6655687
Alignment:
Q  10 aggagcagagagtaagaatataatgtgaatatgaaagagaaaa-ttatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||| ||||||||||||||||| ||||| ||| |||| |||||||||| |||||| |||||| || || ||| ||||||||||    
T  6655599 aggaggagagggtaagaatataatgtgagtatgagagaaaaaaattatctaaaaattatcacaaaatgattttacaaatatcatttctc 6655687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 25332498 - 25332570
Alignment:
Q  26 aatataatgtgaatatgaaagagaaaattatctaaaagttatc-ataaaatggttatagaaacatcatttctc 97  Q
    |||||||| ||| |||||||||||||||| ||||||||||||| | ||||||||| || ||| ||||||||||    
T  25332498 aatataatatgagtatgaaagagaaaattgtctaaaagttatcaaaaaaatggttgtacaaatatcatttctc 25332570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 21588915 - 21588966
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttat 67  Q
    ||||||||| |||||||||| | ||||| |||||||||||||||||||||||    
T  21588915 agagagtaaaaatataatgtaagtatgagagagaaaattatctaaaagttat 21588966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 33056699 - 33056648
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttat 67  Q
    ||||||||| |||||||||||||||||| ||||||| || ||||||||||||    
T  33056699 agagagtaataatataatgtgaatatgagagagaaagttgtctaaaagttat 33056648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 20337388 - 20337310
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatc-taaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||| || ||| |||||| ||||| ||| | ||||||||    
T  20337388 agtaaaaatataatgtgaatatgagagagaaaattatcataaaaattgtcacaaaatgattatataaataacatttctc 20337310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 7990160 - 7990079
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||| |||||||||| ||| | ||||||||||||| |||| |||||||||||| | | || ||| ||||||||||    
T  7990160 agagaataagagtataatgtgagtataagagagaaaattatcaaaaaattatcataaaatagatgtacaaatatcatttctc 7990079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 17500778 - 17500697
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||| ||| || || ||||||||| ||||| ||||| || ||| ||||||||||    
T  17500778 agagaataagaatataatgtgagtatgagagataaagttgtcaaaaagttataataaagtggttgtacaaatatcatttctc 17500697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 17552436 - 17552517
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||| ||| || || ||||||||| ||||| ||||| || ||| ||||||||||    
T  17552436 agagaataagaatataatgtgagtatgagagataaagttgtcaaaaagttataataaagtggttgtacaaatatcatttctc 17552517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 43079626 - 43079703
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||| ||||| ||||||| || || |||| |||||| ||| ||||| || ||| ||||||||||    
T  43079626 agtaagaatataatgtgagtatgagagagaaagttgtccaaaaattatcacaaagtggttgtacaaatatcatttctc 43079703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 47905106 - 47905187
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| | ||| ||||||| || ||||||  || ||| ||||||||| || ||| ||||||||||    
T  47905106 agagagtaagaatataatgtgagtgtgagagagaaagttgtctaaatattgtcaaaaaatggttgtacaaatatcatttctc 47905187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 29034182 - 29034122
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatg 76  Q
    |||| ||||||||||||||||| ||||| ||||||||||||| |||| || ||| ||||||    
T  29034182 agagggtaagaatataatgtgagtatgagagagaaaattatcaaaaaattgtcacaaaatg 29034122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 37392118 - 37392043
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||| ||||| ||| ||| || | |||||||| ||| ||||||||| || ||| ||||||||||    
T  37392118 taagaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatggttgtacaaatatcatttctc 37392043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 18111605 - 18111683
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatc-taaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||| ||||| |||||||||| ||  |||| |||| ||||||||||| |||||  ||||||||||    
T  18111605 agtaaaaatataatgtgagtatgagagagaaaattgtcacaaaaattattataaaatggttgtagaagtatcatttctc 18111683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 40949890 - 40949972
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatc-ataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||| | ||||| ||||||| || ||| |||||| || | ||||| |||||| ||| ||||||||||    
T  40949890 agagagtaagaatataatgtaagtatgagagagaaagttgtctgaaagttgtcaaaaaaatagttatacaaatatcatttctc 40949972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 28824572 - 28824503
Alignment:
Q  28 tataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||| ||||||| || || ||||||| ||| ||| ||||| || ||| ||||||||||    
T  28824572 tataatgtgaatatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctc 28824503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 30941259 - 30941178
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||| ||| ||| | ||||||| |||||||||| || | | ||| ||||| || ||| ||||||||||    
T  30941259 agagagtaagaatataatatgagtataagagagaaagttatctaaaaattgttacaaagtggttgtacaaatatcatttctc 30941178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 31364874 - 31364955
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| |||||||||||| |||||||||||||||| || |||| || | ||||| ||||  || ||| ||||||||||    
T  31364874 agagaataaaaatataatgtgagtatgaaagagaaaattgtcaaaaaattgtaataaagtggtcgtacaaatatcatttctc 31364955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 42467285 - 42467204
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| |||||||||||| |||||  ||||||  | ||||||| |||| | ||||||||| || ||| ||||||||||    
T  42467285 agagagtaaaaatataatgtgagtatgagggagaaagctgtctaaaaattattaaaaaatggttgtacaaatatcatttctc 42467204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 43107691 - 43107610
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| |||||||||||| ||||| ||| ||| || |||||||||| |||| || || || || ||| ||||||||||    
T  43107691 agagagtaaaaatataatgtgagtatgagagataaagttgtctaaaagttgtcatgaagtgattttacaaatatcatttctc 43107610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 5978648 - 5978600
Alignment:
Q  28 tataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatg 76  Q
    |||||||||| |||||||||||||||| |  ||||||| ||||||||||    
T  5978648 tataatgtgagtatgaaagagaaaattgttaaaaagttgtcataaaatg 5978600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 57
Target Start/End: Original strand, 21023119 - 21023147
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatc 57  Q
    |||||||||||||||||||||||||||||    
T  21023119 ataatgtgaatatgaaagagaaaattatc 21023147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 31436494 - 31436422
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcattt 94  Q
    |||||||||||||| | ||||| ||| |||||| || ||||||| ||| ||||||||| || ||| |||||||    
T  31436494 taagaatataatgtaagtatgagagaaaaaattgtcaaaaagttgtcaaaaaatggttgtacaaatatcattt 31436422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 34349017 - 34349097
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttct 96  Q
    ||||| |||| ||||||||||| ||||| |||||||||| || ||||||| |   ||||||||| || ||| |||||||||    
T  34349017 agagaataaggatataatgtgagtatgagagagaaaattgtcaaaaagttgtacaaaaatggttgtacaaatatcatttct 34349097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 16584 - 16665
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||| | | ||||||||| || ||| ||||||||||    
T  16584 agagagtaagaatataatgtgagtatgagagagaaaattatctaaaagttgttacaaaatggttgtacaaatatcatttctc 16665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 56260 - 56179
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||| | | ||||||||| || ||| ||||||||||    
T  56260 agagagtaagaatataatgtgagtatgagagagaaaattatctaaaagttgttacaaaatggttgtacaaatatcatttctc 56179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 9e-20; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 23094457 - 23094376
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||| ||||||||||||||| || |||||||||||||| |||||| || || ||| ||||||||||    
T  23094457 agagagtaagaatataatgtaaatatgaaagagaaagttgtctaaaagttatcacaaaatgattgtacaaatatcatttctc 23094376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 54801079 - 54800998
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||||||||||| ||| ||||| || ||| ||||||||||    
T  54801079 agagagtaagaatataatgtgagtatgaaagataaaattgtctaaaagttatcacaaagtggttgtacaaatatcatttctc 54800998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 18880866 - 18880785
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||||| ||| || | | ||||||||||    
T  18880866 agagaataagaatataatgtgagtatgagagagaaaattgtctaaaagttatcataaaattgttgtacatatatcatttctc 18880785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 33438126 - 33438045
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||| || ||| ||| ||||| || ||| ||||||||||    
T  33438126 agagagtaagaatataatgtgagtatgagagagaaaattatctaaaaattgtcacaaattggttttacaaatatcatttctc 33438045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 35332787 - 35332706
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||||||| ||||| |||| |||||||||| ||||| || ||| ||||||||||    
T  35332787 agagaataagaatataatgtgagtatgagagagaaagttatcaaaaaattatcataaagtggttgtacaaatatcatttctc 35332706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 44495988 - 44496043
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaat 75  Q
    |||||||||||||| ||||||||| |||||||||||||||||| |||||| |||||    
T  44495988 agtaagaatataatatgaatatgagagagaaaattatctaaaaattatcaaaaaat 44496043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 29694050 - 29694124
Alignment:
Q  23 aagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||| |||||  |  |||||| ||||||||||    
T  29694050 aagaatataatgtaagtatgaaagagaaaattatctaaaaattatcacaaaataatagtagaaatatcatttctc 29694124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 18874912 - 18874992
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| || |||||||||| ||| ||||| ||| || ||| ||||||||||    
T  18874912 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaat-gttgtacaaatatcatttctc 18874992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 42854020 - 42853939
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| |||||||||||| ||||| ||||||| || |||||||||| ||| ||||| ||| || ||| ||||||||||    
T  42854020 agagagtaaaaatataatgtgagtatgatagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctc 42853939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 44272800 - 44272881
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| || | |||||||| ||| ||||| ||| || ||| ||||||||||    
T  44272800 agagagtaagaatataatgtgagtatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctc 44272881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 29525939 - 29525860
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttc 95  Q
    ||||| |||||||||||| ||| ||||| ||||||| ||||| ||||||| | ||||||||||| || ||| ||||||||    
T  29525939 agagaataagaatataatctgagtatgagagagaaagttatcaaaaagttgtaataaaatggttgtacaaatatcatttc 29525860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 52456917 - 52456976
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaat 75  Q
    ||||||||| |||||||||||| ||||| |||||||||| |||||||||| ||| |||||    
T  52456917 agagagtaaaaatataatgtgagtatgagagagaaaattgtctaaaagttgtcaaaaaat 52456976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 1688418 - 1688499
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||||||| || |  ||||||| | ||||| ||||| |||||| ||||||||||    
T  1688418 agagaataagaatataatgtgagtatgagagagaaagttgtaaaaaagttgtaataaagtggttctagaaatatcatttctc 1688499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 10096732 - 10096813
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| | |||||||| || ||||||| | ||||| ||||| || ||| ||||||||||    
T  10096732 agagaataagaatataatgtgagtatgagaaagaaaattgtcaaaaagttgtaataaagtggttgtacaaatatcatttctc 10096813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 12074141 - 12074222
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||| |||||||||||||||| | ||| |||| || |||| || ||||||||||||| || ||| ||||||||||    
T  12074141 agagaataagagtataatgtgaatatgagaaagagaattgtcaaaaaattgtcataaaatggttgtacaaatatcatttctc 12074222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 31804319 - 31804400
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||| ||| ||||| ||||||||||||| |||| |||||| ||| || || || ||| ||||||||||    
T  31804319 agagaataagaatataatctgagtatgagagagaaaattatcaaaaaattatcacaaagtgattgtacaaatatcatttctc 31804400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 34027977 - 34027928
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    ||||||||||||||||||||||  ||||||||||||  ||||||||||||    
T  34027977 agagagtaagaatataatgtgagaatgaaagagaaagatatctaaaagtt 34027928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 36444397 - 36444466
Alignment:
Q  28 tataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||| ||||| ||||||| || |  ||||||||||||||||||||| || ||| ||||||||||    
T  36444397 tataatgtgagtatgagagagaaagttgttaaaaagttatcataaaatggttgtacaaatatcatttctc 36444466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 40756002 - 40755921
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||| ||||||||| ||||| ||||||||||||| |||| || | | ||||||||| || ||| ||||||||||    
T  40756002 agagaataagaagataatgtgagtatgagagagaaaattatcaaaaaattgttagaaaatggttgtacaaatatcatttctc 40755921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 46567006 - 46566929
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||| ||| ||| ||| | || ||| ||||||||||    
T  46567006 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggatgtacaaatatcatttctc 46566929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 50506462 - 50506393
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatct-aaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||||| |||||||||||||| |||| |||||| ||||||||| |  ||| ||||||||||    
T  50506462 ataatgtgaatatgagagagaaaattatctcaaaaattatcaaaaaatggttgttcaaatatcatttctc 50506393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 12694424 - 12694496
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcattt 94  Q
    |||||| | ||||||||||||| ||||||| ||||| ||||||| ||| ||||||||| || ||| |||||||    
T  12694424 taagaacaaaatgtgaatatgagagagaaagttatcaaaaagttgtcacaaaatggttgtacaaatatcattt 12694496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 20632644 - 20632719
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||| | |||||| ||||| ||||||| ||||  ||||||||||| ||||||||| || ||| ||||||||||    
T  20632644 taagaatgtcatgtgagtatgagagagaaagttatgcaaaagttatcaaaaaatggttgtataaatatcatttctc 20632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 28676142 - 28676177
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaa 51  Q
    |||||||||||||||||||||| |||||||||||||    
T  28676142 agagagtaagaatataatgtgagtatgaaagagaaa 28676177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 30866428 - 30866353
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||| | |||||| ||||||||||||| || || |||| ||||||||||||| || || ||| ||||||||||    
T  30866428 taagaatgttatgtgagtatgaaagagaaagttgtcaaaaatttatcataaaatgattgtacaaatatcatttctc 30866353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 40308515 - 40308444
Alignment:
Q  23 aagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcattt 94  Q
    ||||||||||||||| ||||||||||||| || || |||| |||| |||||||| || || ||| |||||||    
T  40308515 aagaatataatgtgagtatgaaagagaaagttgtcaaaaaattattataaaatgattgtacaaatatcattt 40308444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 13182408 - 13182330
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttata-gaaacatcatttctcga 99  Q
    ||||||||| ||||| |||||| |||||||||  |  ||||||||||||||||| ||||||  ||| ||||||||||||    
T  13182408 taagaatatcatgtgcatatgagagagaaaatagttcaaaagttatcataaaatagttatataaaatatcatttctcga 13182330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 40161715 - 40161772
Alignment:
Q  39 tatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| |||||||| |||||||||||| ||||||||| || ||| ||||||||||    
T  40161715 tatgaaagataaaattatttaaaagttatcacaaaatggtt-tacaaatatcatttctc 40161772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 42510915 - 42510973
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaa 74  Q
    |||||||||||||||||||||| ||| | |||||||||| | |||||||| ||| ||||    
T  42510915 agagagtaagaatataatgtgagtataagagagaaaattgtttaaaagttgtcaaaaaa 42510973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 3475934 - 3475869
Alignment:
Q  32 atgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||| ||||||| || |  ||||||| ||||||||||||| || ||| ||||||||||    
T  3475934 atgtgaatatgagagagaaagttgtacaaaagttgtcataaaatggttgtacaaatatcatttctc 3475869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 7632455 - 7632492
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatc 57  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  7632455 agtaaaaatataatgtgagtatgaaagagaaaattatc 7632492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 16004316 - 16004397
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||| |||||||||||||| | ||||||  ||||| ||||||| ||||||| |||||  | ||| ||||||||||    
T  16004316 agagaataagagtataatgtgaatattagagagaaggttatcaaaaagttgtcataaagtggttgaacaaatatcatttctc 16004397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 17363311 - 17363230
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||||||| || || ||||||| | ||||| || || || ||| ||||||||||    
T  17363311 agagaataagaatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtgattgtacaaatatcatttctc 17363230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 24209777 - 24209858
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||| | ||||| ||||| |||||||||| ||||||| || ||| ||| ||||  || ||| ||||||||||    
T  24209777 agagagtaagaatagagtgtgagtatgagagagaaaattgtctaaaaattgtcacaaagtggtcgtataaatatcatttctc 24209858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 24772752 - 24772671
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||| |||||||||| ||||| ||||||  || || ||||||| ||||||||||| | || ||| ||||||||||    
T  24772752 agagaataagagtataatgtgagtatgagagagaaggttgtcaaaaagttgtcataaaatggatgtacaaatatcatttctc 24772671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 31574939 - 31574996
Alignment:
Q  26 aatataatgtgaatatgaaagagaaaattatc-taaaagttatcataaaatggttata 82  Q
    |||||||||||| ||||| |||||||||||||  ||||||| ||| ||||||||||||    
T  31574939 aatataatgtgagtatgagagagaaaattatcacaaaagttgtcagaaaatggttata 31574996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 34259896 - 34259815
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||| ||||||||| ||||| ||||||| || |  || |||| ||| ||||||||| || ||| ||||||||||    
T  34259896 agagagtaagaagataatgtgagtatgagagagaaagttgttcaacagttgtcacaaaatggttgtacaaatatcatttctc 34259815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 51397861 - 51397942
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||||||||  | ||||| || || ||||||| | ||||| ||||| || ||| ||||||||||    
T  51397861 agagaataagaatataatgtgaatatgggatagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctc 51397942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 40847449 - 40847405
Alignment:
Q  18 agagtaagaatataatgtgaatatgaaagagaaaattatctaaaa 62  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||    
T  40847449 agagtaagaatataatgtgagtatgagagagaaaatggtctaaaa 40847405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 5e-18; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 48576495 - 48576573
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcattt 94  Q
    ||||| ||||||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||||| ||| |||||||    
T  48576495 agagaataagaatataatgcgaatatgagagagaaagttatcaaaaagttgtcataaaatggttatacaaatatcattt 48576573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 25988974 - 25989055
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| |||||||||| |||||||||| | | ||||||||| || ||| ||||||||||    
T  25988974 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaagttgttaaaaaatggttgtacaaatatcatttctc 25989055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 27352711 - 27352630
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| || || ||||||||||| ||||||||| || ||| ||||||||||    
T  27352711 agagagtaagaatataatgtgagtatgagagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcatttctc 27352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 5043173 - 5043114
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaat 75  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||||    
T  5043173 agagagtaagaatataatgtgaatatgaaagagaaagttatttaaaaattatcacaaaat 5043114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 32821716 - 32821630
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctcgagtt 102  Q
    |||||||||||||||||||||| ||||| |||||||||| | |||||||| ||| ||| ||||| || ||| |||||||||| ||||    
T  32821716 agagagtaagaatataatgtgagtatgagagagaaaattgtttaaaagttgtcacaaagtggttgtacaaatatcatttctcaagtt 32821630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 43755668 - 43755749
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||| |||||| ||| |||||||||||||||| || |||| |||||||||||||||| || ||| ||||||||||    
T  43755668 agagaataagagtataatatgagtatgaaagagaaaattgtcaaaaaattatcataaaatggttgtacaaatatcatttctc 43755749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 51168758 - 51168839
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||||||||| ||| ||| || |||||||||||||| |||||| || || ||  ||||||||||    
T  51168758 agagagtaagaatataatgtgaatatgagagaaaaagttgtctaaaagttatcacaaaatgattgtacaagtatcatttctc 51168839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 8464503 - 8464584
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| |||||||||| || ||||||| | ||||| ||||| || ||| ||||||||||    
T  8464503 agagaataagaatataatgtgagtatgagagagaaaattgtcaaaaagttgtaataaagtggttgtacaaatatcatttctc 8464584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 30530564 - 30530645
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| |||||||||||| ||||| ||||||| || |||||||||| ||| ||||||||| || ||| ||||||||||    
T  30530564 agagaataaaaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtataaatatcatttctc 30530645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 30687133 - 30687052
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||| ||| || |||||||||| |||  |||||||| || ||| ||||||||||    
T  30687133 agagagtaagaatataatgtgagtatgatagaaaaagttgtctaaaagttgtcactaaatggttgtacaaatatcatttctc 30687052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 40238515 - 40238438
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||||| ||| |||||| | |||||||| ||| |||||| || || ||| ||||||||||    
T  40238515 agtaagaatataatgtgaatatgagagaaaaaattgtttaaaagttgtcaaaaaatgattgtacaaatatcatttctc 40238438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 50528047 - 50528128
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||| |||||| |||||||||| ||| ||| || || || ||| ||||||||||    
T  50528047 agagagtaagaatataatgtgagtatgagagaaaaaattgtctaaaagttgtcacaaattgattgtacaaatatcatttctc 50528128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 44730725 - 44730643
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaa--attatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||| |||||||||||||||||||||||||||||||   |||||||||| |||| | ||||||||| || ||| ||||||||||    
T  44730725 agagggtaagaatataatgtgaatatgaaagagaaatttttatctaaaaattat-aaaaaatggttgtacaaatatcatttctc 44730643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 45350091 - 45350166
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||| ||||| ||| |||||||||||||| |||||| |||||  || || ||| ||||||||||    
T  45350091 taagaatataatgtgagtatgagagaaaaaattatctaaaaattatcacaaaataattgtacaaatatcatttctc 45350166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 11460870 - 11460816
Alignment:
Q  21 gtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaat 75  Q
    ||||||||||||||||||||| | |||||||||| | |||||||||||| |||||    
T  11460870 gtaagaatataatgtgaatataagagagaaaattgtgtaaaagttatcacaaaat 11460816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 36930744 - 36930821
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcattt 94  Q
    |||||||||||||||||||||| ||||| ||||||| || |||||||||| ||| |||||| || || ||| |||||||    
T  36930744 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagtt-tcacaaaatgattgtacaaatatcattt 36930821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 38019505 - 38019575
Alignment:
Q  27 atataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||| |||||| |||||| || |||||||||||||| |||||  ||||| ||| ||||||||||    
T  38019505 atataatgtgagtatgaaggagaaagttgtctaaaagttatcacaaaataattatacaaatatcatttctc 38019575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 48325303 - 48325257
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaa 62  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||    
T  48325303 agagagtaaaaatataatgtgagtatgagagagaaaattatctaaaa 48325257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 12708171 - 12708090
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| || ||||||||| |||||||||||||||| || ||||||| | | ||||||||| || ||| ||||||||||    
T  12708171 agagaataaaaacataatgtgattatgaaagagaaaattgtcaaaaagttgttagaaaatggttctacaaatatcatttctc 12708090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 12717716 - 12717635
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| || ||||||||| |||||||||||||||| || ||||||| | | ||||||||| || ||| ||||||||||    
T  12717716 agagaataaaaacataatgtgagtatgaaagagaaaattgtcaaaaagttgttagaaaatggttctacaaatatcatttctc 12717635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 18541041 - 18541122
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||| ||||||||||||||| ||||||| || || ||||||| | | ||||||||| || ||| ||||||||||    
T  18541041 agagaataagaagataatgtgaatatgagagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 18541122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 23554832 - 23554751
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||| ||| || | ||||| |||||| ||||||||| || ||| ||||||||||    
T  23554832 agagaataagaatataatgtgagtatgagagataaagttgtttaaaaattatcaaaaaatggttgtacaaatatcatttctc 23554751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 24775056 - 24774975
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| |||||  ||||||||| || ||||||| | ||||| ||||| |  ||| ||||||||||    
T  24775056 agagagtaagaatataatgtgagtatgagtgagaaaattgtcaaaaagttgtaataaagtggttgttcaaatatcatttctc 24774975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 25098778 - 25098859
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||  || |||||||||| | | ||| ||||| || ||| ||||||||||    
T  25098778 agagagtaagaatataatgtgagtatgagagagaaggttgtctaaaagttgttacaaagtggttgtacaaatatcatttctc 25098859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 46003549 - 46003468
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||  |||||||||||||||||||||||||| |  |||| || ||| ||||||| |||| | | ||||||||||    
T  46003549 agagagtaagaggataatgtgaatatgaaagagaaaattgttaaaaaattgtcacaaaatggatatacatatatcatttctc 46003468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 49596316 - 49596235
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||||||| || || |||| || | ||||||||||| || ||| ||||||||||    
T  49596316 agagaataagaatataatgtgagtatgagagagaaagttgtcaaaaaattgtaataaaatggttgtacaaatatcatttctc 49596235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 16658518 - 16658438
Alignment:
Q  17 gagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||| ||||||| ||||| ||||||| || |||||||||| ||| ||  ||||| || ||| ||||||||||    
T  16658518 gagagtaagaatagaatgtgagtatgagagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcatttctc 16658438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 51038054 - 51037978
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttct 96  Q
    ||||| ||||||||||||| |||||| ||||| ||||||||| ||| ||| |||||| || || ||| |||||||||    
T  51038054 agtaaaaatataatgtgaacatgaaaaagaaagttatctaaatgttgtcaaaaaatgattgtataaatatcatttct 51037978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 366732 - 366657
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||| ||||| ||||||| || || ||||||||||| ||| ||||| || ||| ||||||||||    
T  366732 taagagtataatgtgagtatgagagagaaagttgtcaaaaagttatcagaaagtggttgtataaatatcatttctc 366657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 50118896 - 50118967
Alignment:
Q  26 aatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||| ||| ||| || || ||||||| | ||||| |||||||| ||| ||||||||||    
T  50118896 aatataatgtgaatatgagagataaagttgtcaaaaagttgtaataaagtggttatataaatatcatttctc 50118967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 25702205 - 25702287
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctcg 98  Q
    |||||||||||||||||||||| ||||| ||| ||| || |||| ||||| | | |||||  || |||||| |||||||||||    
T  25702205 agagagtaagaatataatgtgagtatgagagataaagttgtctacaagttgttaaaaaataattgtagaaatatcatttctcg 25702287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 49645420 - 49645362
Alignment:
Q  39 tatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||| |  ||||||| |||||||||| ||||| ||| ||||||||||    
T  49645420 tatgaaagagaaaattgtacaaaagttgtcataaaatgattatacaaatatcatttctc 49645362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 586980 - 586899
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||| | ||||| ||| ||| || ||||||| |||||| ||| || || || ||| ||||||||||    
T  586980 agagagtaagaatataatgtaagtatgagagaaaaagttgtctaaaaattatcacaaagtgattgtacaaatatcatttctc 586899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 3919381 - 3919300
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||||||||||| || ||||| ||||||| || || |||| |||| | ||||||||| || ||| ||||||||||    
T  3919381 agagaataagaatataatgcgagtatgagagagaaagttgtccaaaaattataacaaaatggttgtacaaatatcatttctc 3919300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 14002732 - 14002812
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||| ||||||| | ||||| || | ||||| |||||| |||| |||| || ||| ||||||||||    
T  14002732 agagagtaagaatataatgtaaatatgagaaagaaagttgtataaaaattatca-aaaaaggttgtacaaatatcatttctc 14002812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 26839461 - 26839383
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttct 96  Q
    |||| ||||||||||||||||| |||||  |||||| || |  ||||||||||||||||||||| || ||| | |||||||    
T  26839461 agagggtaagaatataatgtgagtatga--gagaaagttgtacaaaagttatcataaaatggttgtacaaataccatttct 26839383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 30519618 - 30519655
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatc 57  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  30519618 agtaaaaatataatgagaatatgaaagagaaaattatc 30519655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 34941914 - 34941991
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||| ||||| ||||||| || ||||||| || ||| |||||| |  || ||| ||||||||||    
T  34941914 agtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaaatgatagtacaaatatcatttctc 34941991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 40605415 - 40605492
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||| | ||| | ||||||| || ||||||| |||||| |||| |||| || ||| ||||||||||    
T  40605415 agtaagaatataatgtaagtataagagagaaagttgtctaaaaattatcaaaaaaaggttgtacaaatatcatttctc 40605492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 11068506 - 11068426
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttct 96  Q
    ||||| ||||||||||||||||| |||| ||||||| || || |||| || | ||||| ||||| || ||| |||||||||    
T  11068506 agagaataagaatataatgtgaacatgagagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttct 11068426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 33660106 - 33660062
Alignment:
Q  32 atgtgaatatgaaagagaaaattatctaaaagttatcataaaatg 76  Q
    |||||| ||||||||||||||||||| |||| |||| ||||||||    
T  33660106 atgtgagtatgaaagagaaaattatccaaaaattattataaaatg 33660062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 34173658 - 34173598
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatg 76  Q
    ||||||||| |||| ||||||| ||||| | ||||| ||||| ||||||||||| ||||||    
T  34173658 agagagtaaaaatacaatgtgagtatgagaaagaaatttatccaaaagttatcacaaaatg 34173598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 52368749 - 52368670
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttct 96  Q
    ||||||||||||||||| |||| ||||| ||||||| || | ||||| || ||| |||| ||||||| ||| |||||||||    
T  52368749 agagagtaagaatataacgtgagtatgagagagaaagttgtgtaaaaattgtca-aaaaaggttatacaaatatcatttct 52368670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 6849251 - 6849332
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||||||| ||| || |||||||||| ||| ||||||||| || ||| ||||||||||    
T  6849251 agagagtaagaatataatgtgagtatgaaagataaagttgtctaaaagttgtcacaaaatggttgtataaatatcatttctc 6849332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 12045643 - 12045724
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| || |||||||||| |||  |||||||| || ||| ||||||||||    
T  12045643 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatggttgtacaaatatcatttctc 12045724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 14548813 - 14548894
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| || ||||||| |||| | ||||||||| || ||| ||||||||||    
T  14548813 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcatttctc 14548894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 20853000 - 20852919
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||||||||| |||| ||||| | ||||| || ||||||| |||||||||||||||| || ||| ||||||||||    
T  20853000 agagaataagaatataacgtgagtatgagaaagaaagttgtctaaaaattatcataaaatggttgtacaaatatcatttctc 20852919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 33863238 - 33863319
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||| |||||| ||||||| |||||| ||||||||| || | | ||||||||||    
T  33863238 agagaataagaatataatgtgagtatgagagataaaattgtctaaaaattatcagaaaatggttgtacatatatcatttctc 33863319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 6005025 - 6004944
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| || ||||||| || ||| ||| | ||| || ||| ||||||||||    
T  6005025 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtagttgtacaaatatcatttctc 6004944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 9048306 - 9048387
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| || ||||||||| ||||| |||||||||| || ||||||| | | |||||||||||| ||| ||||||||||    
T  9048306 agagaataaaaacataatgtgagtatgagagagaaaattgtcaaaaagttgttagaaaatggttatacaaatatcatttctc 9048387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 27630978 - 27630897
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||||||| || || |||| || ||||||||||| | || ||| ||||||||||    
T  27630978 agagaataagaatataatgtgagtatgagagagaaagttgtcaaaaaattgtcataaaatggatgtacaaatatcatttctc 27630897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 39021433 - 39021514
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| || ||||||||| ||||||||||| | || || ||||||||||| ||||||||| || ||| ||||||||||    
T  39021433 agagaataaaaacataatgtgagtatgaaagagagagttgtcaaaaagttatcacaaaatggttgtacaaatatcatttctc 39021514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 42443185 - 42443104
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| |||||||||||| ||||| ||||||| || |||||||||| |||  ||||| || || ||| ||||||||||    
T  42443185 agagagtaataatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatgattgtacaaatatcatttctc 42443104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 44380604 - 44380685
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||| |||||||||||||| ||||| ||||||| || | |||| ||| ||| ||||||||| || ||| ||||||||||    
T  44380604 agagagtcagaatataatgtgagtatgagagagaaagttgtttaaaggttgtcacaaaatggttgtacaaatatcatttctc 44380685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 9046234 - 9046171
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggtt 79  Q
    ||||||||| |||||||||||||||| | ||| ||| || ||||||| |||||| |||||||||    
T  9046234 agagagtaataatataatgtgaatataagagataaatttgtctaaaaattatcacaaaatggtt 9046171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 25911263 - 25911188
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||| |||||| ||||||||| || | ||||| || | | ||||||||| |||||| ||||||||||    
T  25911263 taagaatataatgcgaatatcaaagagaaagttgtgtaaaaattgtgacaaaatggttgtagaaatatcatttctc 25911188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 29910208 - 29910283
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||| ||||||||||||| || || |||| |||| ||||| ||||| |  ||| ||||||||||    
T  29910208 taagaatataatgtgagtatgaaagagaaagttgtcaaaaaattataataaagtggttgtgcaaatatcatttctc 29910283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 32234442 - 32234493
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttat 67  Q
    ||||| |||||| |||||||||||||||||||||||||| | ||||| ||||    
T  32234442 agagaataagaagataatgtgaatatgaaagagaaaattgtataaaaattat 32234493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 9001004 - 9001050
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaa 62  Q
    |||||||||||||||||||||| ||||| ||| |||||| |||||||    
T  9001004 agagagtaagaatataatgtgagtatgagagaaaaaattgtctaaaa 9001050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 33605067 - 33605149
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattat-ctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| || | ||||||| ||||| |||||||||| | | ||||||||||||||||||||| |  ||| ||||||||||    
T  33605067 agagagtaaaaacacaatgtgagtatgagagagaaaattgttccaaaagttatcataaaatggttgttcaaatatcatttctc 33605149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 37873118 - 37873176
Alignment:
Q  39 tatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||||| || || ||||||||||||||||||||| || ||| ||||||||||    
T  37873118 tatgacagagaaagttgtcaaaaagttatcataaaatggttttacaaatatcatttctc 37873176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 38844784 - 38844861
Alignment:
Q  19 gagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| || |||||||| ||  ||||||| ||||||||||||| ||| ||||||||| || ||| ||||||||||    
T  38844784 gagtaagaa-atgatgtgaatgtgggagagaaagttatctaaaagttgtcacaaaatggttgtacaaatatcatttctc 38844861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 45504639 - 45504561
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatc-taaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||| ||||| |||||||||| || ||||| |||||  ||||||||| || ||| ||||||||||    
T  45504639 agtaaaaatataatgtgagtatgatagagaaaattttcataaaaattatcccaaaatggttttaaaaatatcatttctc 45504561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 6162029 - 6161948
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| || ||||||||| ||||||||||| | || || ||| ||| ||||||||||||| || ||| ||||||||||    
T  6162029 agagaataaaaacataatgtgagtatgaaagagagagttgtcaaaaggttgtcataaaatggttgtacaaatatcatttctc 6161948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 7678813 - 7678732
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| |||||||||||| ||||| |||||||||| ||  |||||| ||| ||| ||||| || ||| ||||||||||    
T  7678813 agagaataaaaatataatgtgagtatgagagagaaaattgtcacaaagttgtcaaaaagtggttgtacaaatatcatttctc 7678732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 9895083 - 9895038
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttat 67  Q
    |||||||||||||| |||||||||||||||||| | ||||| ||||    
T  9895083 taagaatataatgtaaatatgaaagagaaaattgtataaaaattat 9895038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 27055353 - 27055421
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||| | ||||||||||||| ||||| |||  || | |||||||||||||| ||| ||||||||||    
T  27055353 ataatgtaagtatgaaagagaaagttatcaaaacattgtaataaaatggttatataaatatcatttctc 27055421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 30608711 - 30608747
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  30608711 ataatgtgaatatgaaagagaaagttatcaaaaagtt 30608747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 8173306 - 8173383
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| |||||  | ||| ||||||||||    
T  8173306 agtaaaaatataatgtgaatatgaaagagaaaattgtctaaaagttatcacaaagtggttgcacaaatatcatttctc 8173383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 3089054 - 3088973
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| | ||| |||||||||| |||||||||| |||  |||||||| || ||| ||||||||||    
T  3089054 agagagtaagaatataatgtgagtgtgagagagaaaattgtctaaaagttgtcactaaatggttgtacaaatatcatttctc 3088973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 16743256 - 16743337
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| || ||||||| |||| | ||||||||| || ||| ||||||||||    
T  16743256 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcatttctc 16743337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 23633313 - 23633394
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||||||| || || ||||||||| ||||| ||||| |||||| ||||||||||    
T  23633313 agagaataagaatataatgtgagtatgagagagaaagttgtcaaaaagttataataaagtggttgtagaaatatcatttctc 23633394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 32729970 - 32729889
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| || | |||||||| ||| ||||||||| || ||| ||||||||||    
T  32729970 agagagtaagaatataatgtgagtatgagagagaaagttgtataaaagttgtcagaaaatggttgtacaaatatcatttctc 32729889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 9188934 - 9189015
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||| ||| || |||||||||| | | ||||||||| || ||| ||||||||||    
T  9188934 agagagtaagaatataatgtgagtatgagagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctc 9189015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 12044413 - 12044332
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| |||||||||||| ||||| ||||||| || |||||||||| ||| ||||| ||| || ||| ||||||||||    
T  12044413 agagagtaaaaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatagttgtataaatatcatttctc 12044332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 34490426 - 34490350
Alignment:
Q  18 agagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcattt 94  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||| || | | ||||||||| || ||| |||||||    
T  34490426 agagtaagaatataatgtgagtatgagagagaaaattgtctaaaaattgttaaaaaatggttgtacaaatatcattt 34490350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 12187026 - 12186979
Alignment:
Q  18 agagtaagaatataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    ||||||| |||||||||||||||| ||| |||||||||||||||||||    
T  12187026 agagtaaaaatataatgtgaatataaaatagaaaattatctaaaagtt 12186979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 11742972 - 11743053
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| |||||||||||| ||||| ||| |||||| ||||||| |||||| ||||| ||| || ||| || |||||||    
T  11742972 agagagtaaaaatataatgtgagtatgagagaaaaaattgtctaaaaattatcaaaaaatagttgtacaaatattatttctc 11743053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 11785436 - 11785355
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||||||||| | ||||| || || |||| || ||| ||||||||| || ||| ||||||||||    
T  11785436 agagaataagaatataatgtgaatatgagatagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctc 11785355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 19789066 - 19789147
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||| |||||||||| ||||| ||||||| || || ||||||| | ||||||||||| || ||| ||||||||||    
T  19789066 agagaataagactataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctc 19789147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 28647425 - 28647506
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||| | ||||| |||||||||| || |||| || | ||||||| |||||| ||| ||||||||||    
T  28647425 agagaataagaatataatgtaagtatgagagagaaaattgtcaaaaaattgtaataaaatagttatacaaatatcatttctc 28647506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 29173058 - 29172993
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcattt 94  Q
    ||||||||| ||||||| ||||| ||||  ||||||||||||||||||||| || ||| |||||||    
T  29173058 ataatgtgagtatgaaaaagaaagttattaaaaagttatcataaaatggttgtacaaatatcattt 29172993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 32253855 - 32253780
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||| ||||| |||||||||||||  ||| |||||| ||| ||||| || ||| ||||||||||    
T  32253855 taagagtataatgtgagtatgagagagaaaattatcacaaaattatcaaaaagtggttgtacaaatatcatttctc 32253780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 11635691 - 11635617
Alignment:
Q  23 aagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||| ||| ||||||||||||| ||||  |||| |||||||||||| ||| || ||| ||||||||||    
T  11635691 aagaacataatttgagtatgaaagagaaagttattaaaaaattatcataaaattgttgtacaaatatcatttctc 11635617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 23653887 - 23653941
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaa 74  Q
    ||||| |||||||||||| ||||| ||||||| || |||||||||||||| ||||    
T  23653887 agtaaaaatataatgtgagtatgagagagaaagttgtctaaaagttatcaaaaaa 23653941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 32881269 - 32881215
Alignment:
Q  43 aaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||| | |||||||||||| |||||||||||| ||  ||||||||||    
T  32881269 aaagagaaaattgtttaaaagttatcacaaaatggttatataactatcatttctc 32881215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 2333446 - 2333365
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| |||||||||| | ||||||||||||| ||||| ||||||| | ||||| ||||| || ||  ||||||||||    
T  2333446 agagaataaaaatataatgtaagtatgaaagagaaagttatcaaaaagttgtaataaagtggttgtacaattatcatttctc 2333365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 12177645 - 12177612
Alignment:
Q  18 agagtaagaatataatgtgaatatgaaagagaaa 51  Q
    |||||||||||||||||||| |||||||||||||    
T  12177645 agagtaagaatataatgtgagtatgaaagagaaa 12177612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 7144658 - 7144577
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||| ||| ||||| ||||||| || | |||||||||||||||||||||| || ||| ||||||||||    
T  7144658 agagagtaagaatataatatgagtatgagagagaaagttgtttaaaagttatcataaaatggttgtacaaatatcatttctc 7144577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 29803306 - 29803225
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||||||||| ||||||| || | |||||||| ||| ||||| ||| || ||| ||||||||||    
T  29803306 agagagtaagaatataatgtgaatatgagagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctc 29803225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 36624399 - 36624346
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatca 69  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  36624399 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaagttatca 36624346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 582857 - 582938
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||| ||| ||||| |||||||||| | |||||||||||| ||||| ||| || ||| ||||||||||    
T  582857 agagaataagaatataatatgagtatgagagagaaaattgtttaaaagttatcacaaaatagttgtaaaaatatcatttctc 582938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 5698318 - 5698399
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| |||||||||||| ||||| | ||||| ||||||||||||||| | ||||||||| || ||| || |||||||    
T  5698318 agagagtaaaaatataatgtgagtatgagaaagaaagttatctaaaagttattacaaaatggttgtacaaatatgatttctc 5698399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 15639466 - 15639385
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||| ||| || |||||||||| |||  |||||||| || ||| ||||||||||    
T  15639466 agagagtaagaatataatgtgagtatgagagaaaaagttgtctaaaagttgtcaccaaatggttgtacaaatatcatttctc 15639385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 19437338 - 19437257
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||| |||||||||||||||||||| ||||||| || | |||| ||||||| ||||||||| || ||  ||||||||||    
T  19437338 agagagtcagaatataatgtgaatatgagagagaaagttgtttaaaggttatcacaaaatggttgtacaagtatcatttctc 19437257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 5996742 - 5996667
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| |||||||||| ||||||| || | | ||||| ||| || ||| ||||||||||    
T  5996742 taagaatataatgtgaatatgagagagaaaattgtctaaaaattgttaaaaaatagttgtacaaatatcatttctc 5996667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 35098724 - 35098803
Alignment:
Q  18 agagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||| ||| ||||| ||| |||||| | |||| ||||||| ||||||||| || ||| ||||||||||    
T  35098724 agagtaagaatataatatgagtatgagagaaaaaattgtttaaatgttatcaaaaaatggttgtacaaatatcatttctc 35098803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 27340950 - 27340869
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| |||||||||| || |||| |||| ||||| || || || ||| ||||||||||    
T  27340950 agagaataagaatataatgtgagtatgagagagaaaattgtcaaaaaattataataaagtgattgtacaaatatcatttctc 27340869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 28811509 - 28811429
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||| |||||||||| |||| |||||||||||||| ||||||| ||| ||| ||||| || ||| ||||||||||    
T  28811509 agagaataagagtataatgtgagtatgtaagagaaaattatc-aaaagttgtcacaaagtggttgtacaaatatcatttctc 28811429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 26627406 - 26627362
Alignment:
Q  21 gtaagaatataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    ||||||||||||||||| ||||||||||||| || ||||||||||    
T  26627406 gtaagaatataatgtgagtatgaaagagaaagttgtctaaaagtt 26627362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 28904071 - 28903991
Alignment:
Q  17 gagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||| ||||||| ||||| ||||||| || |||||||||| ||| ||  ||||| || ||| ||||||||||    
T  28904071 gagagtaagaatagaatgtgagtatgagagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcatttctc 28903991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 28940466 - 28940386
Alignment:
Q  17 gagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||| ||||||| ||||| ||||||| || |||||||||| ||| ||  ||||| || ||| ||||||||||    
T  28940466 gagagtaagaatagaatgtgagtatgagagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcatttctc 28940386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 14914446 - 14914372
Alignment:
Q  23 aagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| || ||||||||||| |||||||| || || ||||||| ||| ||||||||| || ||| ||||||||||    
T  14914446 aagaacatcatgtgaatatgtaagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttctc 14914372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 34767411 - 34767465
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatg 76  Q
    ||||| |||||||||| ||||| |||||| |||||| |||| |||||||||||||    
T  34767411 taagagtataatgtgagtatgagagagaatattatcaaaaatttatcataaaatg 34767465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 91296 - 91247
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    |||||||||||||||||||||| ||||| ||||||| || || |||||||    
T  91296 agagagtaagaatataatgtgagtatgagagagaaagttgtccaaaagtt 91247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 11880977 - 11881026
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    |||||||||||| ||||||||| ||||| ||||||| || ||||||||||    
T  11880977 agagagtaagaagataatgtgagtatgagagagaaagttgtctaaaagtt 11881026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 18638815 - 18638896
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||| ||| || || ||||||| | ||||||||||| |  ||| ||||||||||    
T  18638815 agagaataagaatataatgtgagtatgagagataaatttgtcaaaaagttgtaataaaatggttgtgcaaatatcatttctc 18638896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 20040869 - 20040820
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    |||||||||||||||||||||| ||||||| ||||| || | ||||||||    
T  20040869 agagagtaagaatataatgtgagtatgaaaaagaaagttgtgtaaaagtt 20040820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 33743323 - 33743404
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||| | ||||| ||||||| || || |||| || | ||||| |||||||| ||| ||||||||||    
T  33743323 agagaataagaatataatgtaagtatgagagagaaagttgtcaaaaaattgtaataaagtggttatacaaatatcatttctc 33743404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 36572772 - 36572691
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| || ||||||||| ||||||||||| | || || ||||||| ||| ||||| |||||| ||| ||||||||||    
T  36572772 agagaataaaaacataatgtgagtatgaaagagagagttgtcaaaaagttgtcacaaaatagttatacaaatatcatttctc 36572691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 39840699 - 39840780
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||||||| || || ||||||| | ||||| ||||| || ||| || |||||||    
T  39840699 agagaataagaatataatgtgagtatgagagagaaatttgtcaaaaagttgtaataaagtggttgtacaaatattatttctc 39840780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 41460197 - 41460116
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||| ||| || | |||||||| ||| |||||| || || ||| ||||||||||    
T  41460197 agagaataagaatataatgtgagtatgagagataaagttgtttaaaagttgtcaaaaaatgattgtataaatatcatttctc 41460116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 6538938 - 6538870
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||||||||||||| || || |||| |||||| |||||  || || ||| ||||||||||    
T  6538938 ataatgtgaatatgaaagagaaagttgtcaaaaaattatcacaaaataattgtacaaatatcatttctc 6538870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 8897450 - 8897382
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| ||||||||||| | || || ||| ||| ||||||||||||| || ||| ||||||||||    
T  8897450 ataatgtgagtatgaaagagagagttgtcaaaaggttgtcataaaatggttgtacaaatatcatttctc 8897382  T

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Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 36869827 - 36869908
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| || |||||||||| ||| ||||||||| || ||| ||||||||||    
T  36869827 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcaaaaaatggttgtacaaatatcatttctc 36869908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 43499552 - 43499632
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||| ||||| || ||| ||||||||||    
T  43499552 agagagtaagaatataatgtgagtatgaaa-agaaaattgtccaaaagttatcataaagtggttgtacaaatatcatttctc 43499632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 46315945 - 46316026
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| |||||||||||| |||||| ||||||| ||||||| ||||| || ||| ||||||||||    
T  46315945 agagaataagaatataatgtgagtatgaaagagaagattatcaaaaagttgtcataaagtggttgtacaaatatcatttctc 46316026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 1901916 - 1901997
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| || |||||||||| ||| ||| ||||| || ||| ||||||||||    
T  1901916 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttctc 1901997  T

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Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 1911362 - 1911443
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| || |||||||||| ||| ||| ||||| || ||| ||||||||||    
T  1911362 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttctc 1911443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 34607910 - 34607991
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||| || ||| ||| ||||| || ||| ||||||||||    
T  34607910 agagagtaagaatagaatatgagtatgaaagagaaaattatctaaaaattgtcacaaagtggttgtacaaatatcatttctc 34607991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 462391 - 462472
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||||||||| |||| ||||| ||||||| || |||||||||| ||| ||||||||| || ||| ||||||||||    
T  462391 agagaataagaatataacgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatggttgtacaaatatcatttctc 462472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 1295413 - 1295332
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||| ||| || || ||||||||||| ||||| ||| || ||| ||||||||||    
T  1295413 agagagtaagaatataatgtgagtatgagagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcatttctc 1295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 7867701 - 7867782
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| | |||||||| | |||||||| ||| ||||| ||| || ||| ||||||||||    
T  7867701 agagagtaagaatataatgtgagtatgagaaagaaaattgtttaaaagttgtcacaaaatagttgtacaaatatcatttctc 7867782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 18181524 - 18181443
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||| | ||| | | | ||| |||||||||||||||| |||| ||||| |||||| ||||||||||    
T  18181524 agagagtaagaatataatgtaagtatcagataaaaagttatctaaaagttatcgtaaagtggttgtagaaatatcatttctc 18181443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 32795911 - 32795830
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| |||||||||||| ||||| |||||||||| |||||||||| | | ||  |||||||| ||| ||||||||||    
T  32795911 agagagtaataatataatgtgagtatgagagagaaaattgtctaaaagttgttacaatgtggttatataaatatcatttctc 32795830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 35376541 - 35376622
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||| ||| ||||| ||||||| || ||||||| || ||| ||||||||| || ||| ||||||||||    
T  35376541 agagagtaagaatataatatgagtatgagagagaaagttgtctaaaaattgtcacaaaatggttgtacaaatatcatttctc 35376622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 37035691 - 37035618
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatc-ataaaatggttatagaaacatcattt 94  Q
    ||||||||||| |||||||||| |||||||||| |||||||||| || | |||||||||||| ||| |||||||    
T  37035691 taagaatataacgtgaatatgagagagaaaattgtctaaaagttgtcaaaaaaatggttatacaaatatcattt 37035618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 45150256 - 45150337
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| || |||||||||| ||| ||||| ||| || ||  ||||||||||    
T  45150256 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaaatagttgtataagtatcatttctc 45150337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 47773965 - 47774046
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| |||||||| ||||||||| ||| ||| ||||||||||||||||| ||||||  | || ||| ||||||||||    
T  47773965 agagagtaaaaatataatatgaatatgagagataaagttatctaaaagttatcacaaaatgaatgtacaaatatcatttctc 47774046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 16139285 - 16139348
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggtt 79  Q
    ||||| |||||||||||||||  ||||| |||||||||| |  |||||||||||||||||||||    
T  16139285 agagaataagaatataatgtgtttatgagagagaaaattgttcaaaagttatcataaaatggtt 16139348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 55344296 - 55344367
Alignment:
Q  26 aatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| || |||||||||||||||| || | ||||||||| ||||||||| || ||| ||||||||||    
T  55344296 aatataatgcgagtatgaaagagaaaattgtcaagaagttatcacaaaatggttgtacaaatatcatttctc 55344367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 275307 - 275226
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| |||| |||||||| || | |||||||| |||  ||||| || || ||| ||||||||||    
T  275307 agagagtaagaatataatgtgagtatggaagagaaagttttttaaaagttgtcaataaatgattgtacaaatatcatttctc 275226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 9027941 - 9027872
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctcg 98  Q
    ||||||||| ||||| ||||||| ||||| ||||||||||| ||| ||||| || ||| |||||||||||    
T  9027941 ataatgtgagtatgagagagaaagttatcaaaaagttatcacaaagtggttgtacaaatatcatttctcg 9027872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 29705984 - 29705903
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||  ||||||||| ||||||||||||||||||| |||| |||||| |||||  || || ||| ||||||||||    
T  29705984 agagaataagagaataatgtgagtatgaaagagaaaattatcaaaaaattatcacaaaataattgtataaatatcatttctc 29705903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 31326791 - 31326710
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||||||| |||| ||||||||||||| |||| ||||| || | | ||| ||||| || ||| ||||||||||    
T  31326791 agagagtaagaatataaagtgagtatgaaagagaaagttatttaaaaattctgagaaagtggttgtacaaatatcatttctc 31326710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 32981111 - 32981192
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| |||||||||||| ||||| ||||||| || |||||||||| |||  |||||||| || ||| || |||||||    
T  32981111 agagagtaataatataatgtgagtatgagagagaaagttgtctaaaagttgtcactaaatggttgtacaaatataatttctc 32981192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 43900747 - 43900828
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||||||| || || ||||||| | ||||| ||||| || ||| ||||||||||    
T  43900747 agagaataagaatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctc 43900828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 45517647 - 45517728
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||| ||||||||||||||||| ||||| ||||  |||||||||   ||||||||| || ||| ||||||||||    
T  45517647 agagaataagaagataatgtgaatatgaaaaagaaagttatacaaaagttatacaaaaatggttgtacaaatatcatttctc 45517728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 45528932 - 45529013
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||| |||||||| ||||| | ||||| || |||||||||| ||| ||||| ||| || ||| ||||||||||    
T  45528932 agagagtaagaatctaatgtgagtatgagaaagaaatttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctc 45529013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 3648657 - 3648597
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatc-taaaagttatcataaaatggtt 79  Q
    ||||| |||| ||||||||||||| |||||||||| ||  |||||||||||||||||||||    
T  3648657 agtaaaaatacaatgtgaatatgagagagaaaattgtcacaaaagttatcataaaatggtt 3648597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 33374564 - 33374492
Alignment:
Q  26 aatataatgtgaatatgaaagagaaaattatc-taaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||| ||||| ||||||| ||||| ||||| || |||||||||||||||  ||| ||||||||||    
T  33374564 aatataatgtgagtatgagagagaaagttatcataaaaattgtcataaaatggttattcaaatatcatttctc 33374492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 40419648 - 40419712
Alignment:
Q  32 atgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttct 96  Q
    |||||||||||| |||||||||| ||||||| |||||| |||||| || || ||| |||||||||    
T  40419648 atgtgaatatgagagagaaaattgtctaaaaattatcacaaaatgattgtacaaatatcatttct 40419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 51410874 - 51410806
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||||||| || ||||||| | | ||| ||||| || ||| ||||||||||    
T  51410874 ataatgtgaatatgaaagagaaaattgtcaaaaagttgtgagaaagtggttgtacaaatatcatttctc 51410806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 7210 - 7285
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||| ||||| ||||||| || || ||||||| ||| |||||| || || ||| ||||||||||    
T  7210 taagaatataatgtgagtatgagagagaaagttgtccaaaagttgtcagaaaatgattgtacaaatatcatttctc 7285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 8868951 - 8868872
Alignment:
Q  18 agagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||| ||||| ||||||| || ||| |||||| ||| |||| | || || ||| ||||||||||    
T  8868951 agagtaagaatataatgtgagtatgagagagaaagttgtctgaaagttgtcaaaaaaagattgtacaaatatcatttctc 8868872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 25959536 - 25959595
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggtt 79  Q
    ||||| |||||||||||| ||||| ||||||| || |||||||||||||| ||| |||||    
T  25959536 agtaaaaatataatgtgagtatgagagagaaagttgtctaaaagttatcacaaagtggtt 25959595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 36799473 - 36799398
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||| ||||| | | |||||| | |||||||||||| ||||| ||| || ||| ||||||||||    
T  36799473 taagaatataatgtgagtatgagaaataaaattgtttaaaagttatcaaaaaatagttgtacaaatatcatttctc 36799398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 37134602 - 37134677
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||| ||||||||||||||||| || |  |||| || ||||||||| ||| || ||| ||||||||||    
T  37134602 taagaatataatatgaatatgaaagagaaagttgttaaaaaattgtcataaaatagttgtacaaatatcatttctc 37134677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 43409354 - 43409433
Alignment:
Q  18 agagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||| ||| | ||||||| || || |||| |||||| ||| ||||| || ||| ||||||||||    
T  43409354 agagtaagaatataatgtgagtataagagagaaagttttccaaaaattatcacaaagtggttgtacaaatatcatttctc 43409433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 52678573 - 52678648
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||||||||||| || || |||| |||| | ||| ||||| || |||  |||||||||    
T  52678573 taagaatataatgtgaatatgaaagagaaagttgtcaaaaaattattagaaattggttgtacaaatgtcatttctc 52678648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 41717531 - 41717465
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttata 82  Q
    ||||| ||| || ||||||||| ||||||||||| | || || ||||||| ||||||||||||||||    
T  41717531 agagaataaaaacataatgtgagtatgaaagagagagttgtcaaaaagttgtcataaaatggttata 41717465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 11335292 - 11335373
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||| ||| ||||||||||| ||||||| || || ||||||| | | ||||||||| || ||| ||||||||||    
T  11335292 agagaataagaagatattgtgaatatgagagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 11335373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 14957917 - 14957836
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||| |||||||||||||||| ||| |||||| |  ||||||| ||| ||| ||||| || ||| ||||||||||    
T  14957917 agagaataagagtataatgtgaatatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttctc 14957836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 20549375 - 20549456
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||| ||||||||||||||| ||||||  ||||  |||| |||||||||||| | | || ||| ||||||||||    
T  20549375 agagaataagaagataatgtgaatatgagagagaatgttatacaaaaattatcataaaatagatgtacaaatatcatttctc 20549456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 26668923 - 26668842
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||||||||||| | ||| || || || |||||| |||||||| || || ||| || |||||||    
T  26668923 agagaataagaatataatgtgaatatgaaaaaaaaagttgtcaaagagttataataaaatgattgtacaaatattatttctc 26668842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 28300367 - 28300286
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||| ||| ||| ||||| ||| || || |||| |||| ||||||||||| || ||| ||||||||||    
T  28300367 agagaataagaatataatttgagtataaaagaaaaagttgtcaaaaaattataataaaatggttgtacaaatatcatttctc 28300286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 28625274 - 28625351
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| || ||||||||| ||||| |||||||||| |  ||  ||||||||||||||||| |||| | ||||||||||    
T  28625274 agtaaaaacataatgtgagtatgagagagaaaattgttcaagcgttatcataaaatggttgtagacatatcatttctc 28625351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 34208348 - 34208299
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    ||||| ||| || ||||| |||||||||||||||||||||| ||||||||    
T  34208348 agagaataaaaacataatatgaatatgaaagagaaaattatataaaagtt 34208299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 43333660 - 43333741
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| |||||||||||| ||||||||||| | || || ||||||| ||||||||||  | || ||| ||||||||||    
T  43333660 agagaataaaaatataatgtgagtatgaaagagagagttgtcaaaaagttgtcataaaatgactgtacaaatatcatttctc 43333741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 44334791 - 44334872
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| |||||||||||| ||||| ||||||| || || ||||||| | ||||| ||||| || ||| ||||||||||    
T  44334791 agagaataaaaatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctc 44334872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 50280093 - 50280158
Alignment:
Q  32 atgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||| || |  ||||||| ||||| ||||||| || ||| ||||||||||    
T  50280093 atgtgaatatgaaagagaaagttgtacaaaagttgtcatagaatggttgtacaaatatcatttctc 50280158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 12044744 - 12044796
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatc 68  Q
    ||||| ||||||| | | |||||||||| ||||||||||||| ||||||||||    
T  12044744 agagaataagaatctcacgtgaatatgagagagaaaattatccaaaagttatc 12044796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 18713684 - 18713604
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttct 96  Q
    ||||| ||| |||||||||||| ||||| ||||| |||| || ||||||  | ||||||||||| || ||| |||||||||    
T  18713684 agagaataaaaatataatgtgagtatgagagagagaattgtcaaaaagtattaataaaatggttgtacaaatatcatttct 18713604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 44910765 - 44910697
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||| ||||| |||||| |||||  ||||||||||||||||||  | || ||| ||||||||||    
T  44910765 ataatgtgagtatgagagagaagattatacaaaagttatcataaaatgaatgtacaaatatcatttctc 44910697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 54
Target Start/End: Original strand, 51465742 - 51465770
Alignment:
Q  26 aatataatgtgaatatgaaagagaaaatt 54  Q
    |||||||||||||||||||||||||||||    
T  51465742 aatataatgtgaatatgaaagagaaaatt 51465770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 54134919 - 54134852
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||||| ||||||| |||| |||||||| | | ||||||||| || ||| ||||||||||    
T  54134919 ataatgtgaatatgagagagaaagttat-taaaagttgtaaaaaaatggttgtacaaatatcatttctc 54134852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 8352916 - 8352835
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| |||||||||| |||||||||||| | ||||| ||| || ||| ||||||||||    
T  8352916 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaagttattaaaaaatagttgtacaaatatcatttctc 8352835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 1052486 - 1052567
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||||||||| ||| ||| || |||||||||| | | ||||||||| || ||| ||||||||||    
T  1052486 agagagtaagaatataatgtgaatatgagagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctc 1052567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 28165210 - 28165129
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| |||||||||| |||||||||| ||| ||||||||| || ||  ||||||||||    
T  28165210 agagattaagaatataatgtgagtatgagagagaaaattgtctaaaagttgtcacaaaatggttgtacaagtatcatttctc 28165129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 9202519 - 9202586
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttct 96  Q
    ||||||||||||||||||||||| || || |||| || ||||||||||||| |||||| |||||||||    
T  9202519 ataatgtgaatatgaaagagaaagttgtcaaaaaattgtcataaaatggttgtagaaatatcatttct 9202586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 30856885 - 30856807
Alignment:
Q  19 gagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||||||||| ||||| ||||||| || |||||||||| ||| ||| ||||| || ||| ||||||||||    
T  30856885 gagtaagaatataatgtgagtatgagagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttctc 30856807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 36763514 - 36763572
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaa 74  Q
    |||||||||||||||||||||| ||||||||||||| || | |||||||||||| ||||    
T  36763514 agagagtaagaatataatgtgagtatgaaagagaaagttgtataaaagttatcaaaaaa 36763572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 13553228 - 13553147
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||| ||| ||||| |||||||||| || |||| |||||| ||| ||||| || ||| ||||||||||    
T  13553228 agagagtaagaatataatatgagtatgagagagaaaattgtccaaaaattatcacaaagtggttgtacaaatatcatttctc 13553147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 21805776 - 21805857
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||| | ||||| |||||||||| |||||||||| |||  ||||| || || ||| ||||||||||    
T  21805776 agagagtaagaatataatgtaagtatgagagagaaaattgtctaaaagttgtcactaaatgattgtacaaatatcatttctc 21805857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 16447246 - 16447314
Alignment:
Q  26 aatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcattt 94  Q
    |||||||||||||||||| ||||||||||||| |||| || | ||||||||||| || ||| |||||||    
T  16447246 aatataatgtgaatatgagagagaaaattatcaaaaaattgtaataaaatggttgtacaaatatcattt 16447314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 3959969 - 3959894
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||| ||||| |||||||||| | |||||||| ||| |||| |||| || ||| ||||||||||    
T  3959969 taagaatataatgtgagtatgagagagaaaattgtgtaaaagttgtcaaaaaaaggttgtacaaatatcatttctc 3959894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 5167730 - 5167776
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaa 62  Q
    |||||||||||||||||||||| ||||| |||||||||| |||||||    
T  5167730 agagagtaagaatataatgtgagtatgagagagaaaattgtctaaaa 5167776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 15283243 - 15283321
Alignment:
Q  19 gagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||||||||| ||||| ||||||| || ||||||| || ||| ||| ||||| || ||| ||||||||||    
T  15283243 gagtaagaatataatgtgagtatgagagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttctc 15283321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 39454237 - 39454307
Alignment:
Q  24 agaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcattt 94  Q
    ||||||||||| || ||||  ||||||||||||| ||||||| ||| |||||||||||| ||| |||||||    
T  39454237 agaatataatgcgagtatgtgagagaaaattatcaaaaagttgtcacaaaatggttatacaaatatcattt 39454307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 3091809 - 3091740
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctcg 98  Q
    ||||||||| ||||| |||||||||| || ||||||||||| ||||| ||| || ||| |||||||||||    
T  3091809 ataatgtgagtatgagagagaaaattgtcaaaaagttatcacaaaatagttgtacaaatatcatttctcg 3091740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 7497981 - 7498062
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| |||||||||||| ||||| ||||||| || || ||||||| | ||||||||||| || ||| ||||||||||    
T  7497981 agagaataaaaatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctc 7498062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 18508159 - 18508078
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||| ||||||||| ||||| ||||||  ||||  ||||||||||||||||||| | || ||| ||||||||||    
T  18508159 agagaataagaagataatgtgagtatgagagagaatgttatacaaaagttatcataaaatggatgtacaaatatcatttctc 18508078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 34913161 - 34913092
Alignment:
Q  28 tataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||| ||||| ||||||| ||||||||||||||| | |||||| || || ||| ||||||||||    
T  34913161 tataatgtgagtatgagagagaaatttatctaaaagttattaaaaaatgattgtacaaatatcatttctc 34913092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 37966661 - 37966585
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||| |||||||||||||||| || ||||||| |  |||||||||| || ||| ||||||||||    
T  37966661 agtaaaaatataatgtgagtatgaaagagaaaattgtc-aaaagttgttttaaaatggttgtataaatatcatttctc 37966585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 26321687 - 26321767
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttct 96  Q
    ||||| |||||  ||||||||| ||||| |||| ||||| || ||||||||||| ||||||||| || ||| |||||||||    
T  26321687 agagaataagatgataatgtgagtatgatagaggaaattgtcaaaaagttatcacaaaatggttgtacaaatatcatttct 26321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 36816419 - 36816487
Alignment:
Q  29 ataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||||||||||| | || || |||| |||||||||||| ||| || ||| ||||||||||    
T  36816419 ataatgtgaatatgaaagagagagttgtcaaaaaattatcataaaatagttgtataaatatcatttctc 36816487  T

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Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 42530225 - 42530305
Alignment:
Q  18 agagtaagaatataatgtgaatatgaaagagaaaattatc-taaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||| || ||||||||||||||||| |||||||||||  ||||||  ||| ||||||||| || ||| ||||||||||    
T  42530225 agagtaaaaacataatgtgaatatgaaaaagaaaattatcacaaaagtcgtcaaaaaatggttgtaaaaatatcatttctc 42530305  T

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Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 5606645 - 5606606
Alignment:
Q  26 aatataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  5606645 aatataatgtgaatatgagagagaaaattatcaaaaagtt 5606606  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 8555281 - 8555327
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaa 62  Q
    |||||||||||||||||||||| ||||| ||||||| || |||||||    
T  8555281 agagagtaagaatataatgtgagtatgagagagaaagttgtctaaaa 8555327  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 11741904 - 11741858
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaa 62  Q
    ||||| ||| |||||||||||||||||| ||||||||||||| ||||    
T  11741904 agagaataaaaatataatgtgaatatgatagagaaaattatcaaaaa 11741858  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 18619387 - 18619469
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctcg 98  Q
    ||||| |||||||||||||||| || || ||||||| || || ||||||| | ||||| ||||||| |||| | |||||||||    
T  18619387 agagaataagaatataatgtgagtacgagagagaaagttgtcaaaaagttgtaataaagtggttatggaaataccatttctcg 18619469  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 21738609 - 21738687
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatc-taaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||| ||||| |||||||||||||  |||| |||| | ||||||||| || ||| ||||||||||    
T  21738609 agtaaaaatataatgtgagtatgagagagaaaattatcacaaaaattattagaaaatggttgtacaaatatcatttctc 21738687  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 42554857 - 42554775
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctcg 98  Q
    ||||| |||||||||||||||| ||||| ||||||| || |  ||||||| | ||||| ||||| || ||| |||||||||||    
T  42554857 agagaataagaatataatgtgagtatgagagagaaagttgtaaaaaagttgtaataaagtggttgtacaaatatcatttctcg 42554775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 5954473 - 5954554
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||||| | ||||||||| || ||||||| || || ||||||||||| | ||||||| || ||| ||||||||||    
T  5954473 agagaataagaatctcatgtgaataggagagagaaagttgtccaaaagttatcacataatggttgtacaaatatcatttctc 5954554  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 10288231 - 10288150
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||| ||| ||| ||||| ||| ||| || ||||||| |||||| ||||| ||| || ||| ||||||||||    
T  10288231 agagagtaagaatagaatatgagtatgagagaaaaagttgtctaaaaattatcacaaaatagttgtacaaatatcatttctc 10288150  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 10749669 - 10749750
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||| || ||||||||| ||||||||||| |||| || |||  || ||||||||||||| || ||| ||||||||||    
T  10749669 agagaataaaaacataatgtgagtatgaaagagagaattgtcaaaagattgtcataaaatggttgtacaaatatcatttctc 10749750  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 12208523 - 12208442
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||| ||||||||| ||||||||||||| ||||  ||||||| |   ||||||||| || ||| ||||||||||    
T  12208523 agagaataagaaaataatgtgagtatgaaagagaaagttatacaaaagttgtacaaaaatggttgtacaaatatcatttctc 12208442  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 16051407 - 16051456
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    ||||| |||||| ||||||||| ||||| ||||||||||||| |||||||    
T  16051407 agagaataagaagataatgtgagtatgagagagaaaattatcaaaaagtt 16051456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 19668177 - 19668222
Alignment:
Q  18 agagtaagaatataatgtgaatatgaaagagaaaattatctaaaag 63  Q
    |||||||||||| ||||||| ||||| |||||||||| ||||||||    
T  19668177 agagtaagaatagaatgtgagtatgagagagaaaattgtctaaaag 19668222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 23358573 - 23358618
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    |||||||||||||||||| ||||| ||||||| || ||||||||||    
T  23358573 agtaagaatataatgtgagtatgagagagaaagttgtctaaaagtt 23358618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 35792446 - 35792527
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| | | ||| || ||||||| |||||| ||| | ||| || ||| ||||||||||    
T  35792446 agagagtaagaatataatgtgagtatgagataaaaagttgtctaaaaattatcacaaagttgttgtacaaatatcatttctc 35792527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 36180570 - 36180525
Alignment:
Q  30 taatgtgaatatgaaagagaaaattatctaaaagttatcataaaat 75  Q
    |||||||||||||||||||| |||| || |||| ||||||||||||    
T  36180570 taatgtgaatatgaaagagataattgtcaaaaaattatcataaaat 36180525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 36795805 - 36795752
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaat 75  Q
    |||||||||||||||| ||||||||||||| || || |||| |||| |||||||    
T  36795805 taagaatataatgtgagtatgaaagagaaagttgtcaaaaaattataataaaat 36795752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 42251910 - 42251959
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    ||||| ||| |||||||||||||||||| ||||||| ||||| |||||||    
T  42251910 agagaataaaaatataatgtgaatatgagagagaaagttatcaaaaagtt 42251959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 42665802 - 42665883
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| ||||||| || || ||||||| | ||||| || || || ||| ||||||||||    
T  42665802 agagaataagaatataatgtgagtatgagagagaaagttgtcaaaaagttgtaataaagtgattgtacaaatatcatttctc 42665883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 4842515 - 4842559
Alignment:
Q  21 gtaagaatataatgtgaatatgaaagagaaaattatctaaaagtt 65  Q
    ||||||||||||||||| ||||| ||||||| || ||||||||||    
T  4842515 gtaagaatataatgtgagtatgagagagaaagttgtctaaaagtt 4842559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 6742404 - 6742460
Alignment:
Q  20 agtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatg 76  Q
    |||||||| ||||||||||||||||||||||| || |  ||||||| ||| ||||||    
T  6742404 agtaagaagataatgtgaatatgaaagagaaagttgttcaaaagttgtcacaaaatg 6742460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 26321871 - 26321935
Alignment:
Q  32 atgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttct 96  Q
    |||||| ||||| |||| ||||| || ||||||||||| ||||||||| || ||| |||||||||    
T  26321871 atgtgagtatgatagaggaaattgtcaaaaagttatcacaaaatggttgtacaaatatcatttct 26321935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 35965650 - 35965578
Alignment:
Q  22 taagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcattt 94  Q
    |||||||||||||||| ||||||||||||| || || |||| || | ||||| ||||| || ||| |||||||    
T  35965650 taagaatataatgtgagtatgaaagagaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcattt 35965578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 4396 - 4315
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| ||||| | ||||| || || ||||||||||||||||||||| || ||| ||||||||||    
T  4396 agagaataagaatataatgtgagtatgagatagaaagttgtcaaaaagttatcataaaatggttgtacaaatatcatttctc 4315  T

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Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 337199 - 337118
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||||||||||| ||||| ||||||| ||||  ||||||| ||| ||||||||| || ||| ||||||||||    
T  337199 agagagtaagaatataatgtgagtatgagagagaaagttattcaaaagttgtcagaaaatggttgtacaaatatcatttctc 337118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 60543 - 60469
Alignment:
Q  23 aagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||||||||||||||||||||||| ||| || || ||||||| | ||||||||||| || ||| ||||||||||    
T  60543 aagaatataatgtgaatatgaaagaaaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctc 60469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 440799 - 440718
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    |||||||||||||| ||||||| ||||| ||||||| || |||||||||| ||||||| | ||| || ||| ||||||||||    
T  440799 agagagtaagaatagaatgtgagtatgagagagaaagttgtctaaaagttgtcataaagtagttgtacaaatatcatttctc 440718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 6508 - 6427
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| ||||| |||||||||| ||||| ||||||  || || ||||||| ||||||||||| | || ||| ||||||||||    
T  6508 agagaataagagtataatgtgagtatgagagagaatgttgtcaaaaagttgtcataaaatggatgtacaaatatcatttctc 6427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 155987 - 155906
Alignment:
Q  16 agagagtaagaatataatgtgaatatgaaagagaaaattatctaaaagttatcataaaatggttatagaaacatcatttctc 97  Q
    ||||| |||||||||||||||| || || ||||||| || || ||||||| | ||||||||||| || ||| ||||||||||    
T  155987 agagaataagaatataatgtgagtacgagagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctc 155906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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