View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4412_low_2 (Length: 554)
Name: NF4412_low_2
Description: NF4412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4412_low_2 |
 |  |
|
| [»] scaffold0024 (5 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 129; Significance: 2e-66; HSPs: 19)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 241 - 437
Target Start/End: Complemental strand, 2986957 - 2986761
Alignment:
| Q |
241 |
taatcaatttaccatttactcaagtgttgcactctcttattttgtcgatgttcctcttctttttcaatcatttaaactaatttgtattaattcacactca |
340 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||| || | |||||||| ||| |
|
|
| T |
2986957 |
taataaatttaccatttactcaagtgttgcactctcttattttatcgatgttcctcttctttttcaattatataaactaaatttcgtcaattcacattca |
2986858 |
T |
 |
| Q |
341 |
aaagtaatttggatctaaattatccaaacaacttgaataatgaaaaatcacttttcaattaaggtattaaatcataaatcacgttacattaaactca |
437 |
Q |
| |
|
||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| |
|
|
| T |
2986857 |
aaaataattttgatttaaattatccaaacaacttgaataatgataaatcacttttcaattaaggtatcaaaacataaatcatgttacattaaactca |
2986761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 2987228 - 2987015
Alignment:
| Q |
35 |
tttaagtaaaatggagagtgagagcataaatgtagggatatatgataaaaa-----taattaatgtggtgcttttttggttgtga-------gttggaag |
122 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||||||| |||||| |||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
2987228 |
tttaagtaaaatggagggtgagagcataaatgtaaggatatatggtaaaaaaataataattaatgtcgtgcttttttggttgtgacttgtgagttggaag |
2987129 |
T |
 |
| Q |
123 |
acatgcgacgtaagttcacaagatcaaacgtgagttatgtactaaatcaacttgtc-gtggaaactctaaataattttaagtgattgttgttcgaaaatc |
221 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||| ||| || |
|
|
| T |
2987128 |
acacttgacgtaagttcacaagatcaaacgtgagttatgtactaaatcaacttgtcaatggaaactgttaataattttaagtgattgttgttccaaattc |
2987029 |
T |
 |
| Q |
222 |
gattcaaggttgga |
235 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
2987028 |
gattcaaggttgga |
2987015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 241 - 437
Target Start/End: Complemental strand, 2928318 - 2928127
Alignment:
| Q |
241 |
taatcaatttaccatttactcaagtgttgcactctcttattttgtcgatgttcctcttctttttcaatcatttaaactaatttgtattaattcacactca |
340 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| | | || |||||||||||| ||||||| |||| | ||| | |||||||||||| |
|
|
| T |
2928318 |
taatcaatttaccatttactcaag-----cactctcttattttattaacgtgcctcttcttttttaatcattcaaaccagttttggtaaattcacactca |
2928224 |
T |
 |
| Q |
341 |
aaagtaatttggatctaaattatccaaacaacttgaataatgaaaaatcacttttcaattaaggtattaaatcataaatcacgttacattaaactca |
437 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| ||| ||||| |||| ||| ||||||||| |
|
|
| T |
2928223 |
aaagtaattttgatctaaattatctaaacaacttgaattatgaaaaatcacttttcaatcaaggtatcaaaacataagtcaccttaacttaaactca |
2928127 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 241 - 406
Target Start/End: Complemental strand, 2935828 - 2935663
Alignment:
| Q |
241 |
taatcaatttaccatttactcaagtgttgcactctcttattttgtcgatgttcctcttctttttcaatcatttaaactaatttgtattaattcacactca |
340 |
Q |
| |
|
|||||||||||||||||| ||||||||| || | ||||||||| | || ||||||||||||||| ||||||| |||| ||| || |||||||| ||| |
|
|
| T |
2935828 |
taatcaatttaccatttagtcaagtgtttcattgtcttattttattgacgttcctcttcttttttaatcattcaaacgcgttttgataaattcacattca |
2935729 |
T |
 |
| Q |
341 |
aaagtaatttggatctaaattatccaaacaacttgaataatgaaaaatcacttttcaattaaggta |
406 |
Q |
| |
|
||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| |
|
|
| T |
2935728 |
aaaacaattttgatctaaattatccaaacaacatgaattatgaaaaatcacttttcaatcaaggta |
2935663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 276 - 433
Target Start/End: Complemental strand, 2953140 - 2952983
Alignment:
| Q |
276 |
cttattttgtcgatgttcctcttctttttcaatcatttaaactaatttgtattaattcacactcaaaagtaatttggatctaaattatccaaacaacttg |
375 |
Q |
| |
|
|||||||| | |||||||||||||||||| ||||||| |||||| ||| || ||||||| || ||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
2953140 |
cttattttatggatgttcctcttcttttttaatcattcaaactagttttgataaattcactcttaaaagtaattttgatctaaattctccaaacaacttg |
2953041 |
T |
 |
| Q |
376 |
aataatgaaaaatcacttttcaattaaggtattaaatcataaatcacgttacattaaa |
433 |
Q |
| |
|
||| |||||||||||||||||||| ||| ||| || ||||||||| | ||||||||| |
|
|
| T |
2953040 |
aattatgaaaaatcacttttcaatcaagatatccaaacataaatcatgatacattaaa |
2952983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 35 - 235
Target Start/End: Complemental strand, 2986155 - 2985959
Alignment:
| Q |
35 |
tttaagtaaaatgga-gagtgagagcataaatgtagggatatatgataaaaataattaatgtggtgcttttttggttgtgagttggaagacatgcgacgt |
133 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||| ||||||| ||||| || || |||||| ||||||||||||||||||| || ||||| |
|
|
| T |
2986155 |
tttaagtaaaatggaagagtgagactataaatgtaggggtatatgaaaaaaaagat----gtcgtgcttgtttggttgtgagttggaaggcacttgacgt |
2986060 |
T |
 |
| Q |
134 |
aagttcacaagatcaaacgtgagttatgtactaaatcaacttgtcgtggaaactctaaataattttaagtgattgttgttcgaaaatcgattcaaggttg |
233 |
Q |
| |
|
||||||| | | ||||||| ||||||||| ||||||||| |||| ||| ||||||| |||||||| ||||||||||||| ||| | |||| ||||||| |
|
|
| T |
2986059 |
aagttcatagggtcaaacgagagttatgttctaaatcaaattgt-ttggggactctaactaattttatgtgattgttgttccaaactggatttaaggttg |
2985961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 439 - 539
Target Start/End: Original strand, 3002848 - 3002960
Alignment:
| Q |
439 |
ttcattcaaaaacaattattatcaccgtggaaccaaacacac------------attagtttggagtttctacctgcacccctagattttgccatccaca |
526 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3002848 |
ttcattcaaaaacaattgttatcaccgtggaaccaaacgcacgcgagacacgacattagtttgaagtttctacctgcacccctagattttgccaaccaca |
3002947 |
T |
 |
| Q |
527 |
ctatcagacccat |
539 |
Q |
| |
|
||||||||||||| |
|
|
| T |
3002948 |
ctatcagacccat |
3002960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 479 - 539
Target Start/End: Complemental strand, 2955027 - 2954967
Alignment:
| Q |
479 |
acattagtttggagtttctacctgcacccctagattttgccatccacactatcagacccat |
539 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
2955027 |
acattagttaggagtttctacctgcaaccctagattttgccaaccacactatcagacccat |
2954967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 479 - 539
Target Start/End: Complemental strand, 2986672 - 2986612
Alignment:
| Q |
479 |
acattagtttggagtttctacctgcacccctagattttgccatccacactatcagacccat |
539 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
2986672 |
acattagttaggagtttctagttgcacccctagattttgccaaccacactatcagacccat |
2986612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 479 - 536
Target Start/End: Complemental strand, 2952895 - 2952838
Alignment:
| Q |
479 |
acattagtttggagtttctacctgcacccctagattttgccatccacactatcagacc |
536 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
2952895 |
acattagttaggaatttctacctgcacccctagattttgccaacaacactatcagacc |
2952838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 479 - 533
Target Start/End: Complemental strand, 2974944 - 2974890
Alignment:
| Q |
479 |
acattagtttggagtttctacctgcacccctagattttgccatccacactatcag |
533 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| ||| | |||||||||| |
|
|
| T |
2974944 |
acattagttaggagtttctacctgcacccctagatttttccaacaacactatcag |
2974890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 378
Target Start/End: Complemental strand, 2955373 - 2955324
Alignment:
| Q |
329 |
aattcacactcaaaagtaatttggatctaaattatccaaacaacttgaat |
378 |
Q |
| |
|
|||||||| ||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2955373 |
aattcacattcagaagtaattttgatctaaattatccaaacaacttgaat |
2955324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 433
Target Start/End: Complemental strand, 2955292 - 2955220
Alignment:
| Q |
361 |
tatccaaacaacttgaataatgaaaaatcacttttcaattaaggtattaaatcataaatcacgttacattaaa |
433 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||||||||| | ||||||| | ||||||||||| |
|
|
| T |
2955292 |
tatccaaaacacttgaattatgaaaaatcacttttcaattaaggtatcctaacataaattatgttacattaaa |
2955220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 479 - 520
Target Start/End: Complemental strand, 2935549 - 2935508
Alignment:
| Q |
479 |
acattagtttggagtttctacctgcacccctagattttgcca |
520 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2935549 |
acattagttatgagtttctacctgcacccctagattttgcca |
2935508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 483 - 536
Target Start/End: Complemental strand, 2965457 - 2965404
Alignment:
| Q |
483 |
tagtttggagtttctacctgcacccctagattttgccatccacactatcagacc |
536 |
Q |
| |
|
||||| |||||||||||||| | ||||||||||||||| | ||||||||||||| |
|
|
| T |
2965457 |
tagttaggagtttctacctgaaaccctagattttgccaacaacactatcagacc |
2965404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 440
Target Start/End: Original strand, 3002775 - 3002820
Alignment:
| Q |
395 |
tcaattaaggtattaaatcataaatcacgttacattaaactcattt |
440 |
Q |
| |
|
||||||||||||||||| ||||||||| |||||| ||||||||||| |
|
|
| T |
3002775 |
tcaattaaggtattaaaacataaatcatgttacactaaactcattt |
3002820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 539
Target Start/End: Complemental strand, 2928051 - 2927989
Alignment:
| Q |
479 |
acattagtttggagtttctacctgcacccctaga--ttttgccatccacactatcagacccat |
539 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||| |||||||| |||| ||||||||||||| |
|
|
| T |
2928051 |
acattagtcaggagtttctacctgcaccccaagattttttgccaaccacgctatcagacccat |
2927989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 373
Target Start/End: Complemental strand, 2985878 - 2985775
Alignment:
| Q |
271 |
actctcttattttgtcgatgttcctcttct-ttttcaatcatttaaactaatttgtattaattcacactcaaaagtaatttggatctaaattatccaaac |
369 |
Q |
| |
|
|||||||||||| | |||| ||||||||| |||| ||||||| |||||| ||| | ||| ||||||||| |||||||| ||| ||||||| |||||| |
|
|
| T |
2985878 |
actctcttatttgattgatgctcctcttctttttttaatcattcaaactagttttggtaaatgcacactcaagagtaatttcgatttaaattacccaaac |
2985779 |
T |
 |
| Q |
370 |
aact |
373 |
Q |
| |
|
|||| |
|
|
| T |
2985778 |
aact |
2985775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 518
Target Start/End: Complemental strand, 2983798 - 2983761
Alignment:
| Q |
481 |
attagtttggagtttctacctgcacccctagattttgc |
518 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
2983798 |
attagttaggagtttttacctgcacccctagattttgc |
2983761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 106; Significance: 9e-53; HSPs: 5)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 243 - 440
Target Start/End: Original strand, 43204 - 43401
Alignment:
| Q |
243 |
atcaatttaccatttactcaagtgttgcactctcttattttgtcgatgttcctcttctttttcaatcatttaaactaatttgtattaattcacactcaaa |
342 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| |||||| ||| || |||||||||| ||| |
|
|
| T |
43204 |
atcaattcaccatttactcaagtgttgcagtctcttattttattgatgttcctcttctttttcaatcattcaaactagttttgataaattcacacttaaa |
43303 |
T |
 |
| Q |
343 |
agtaatttggatctaaattatccaaacaacttgaataatgaaaaatcacttttcaattaaggtattaaatcataaatcacgttacattaaactcattt |
440 |
Q |
| |
|
||| |||| |||| |||||||||||||||||||||| ||||||||||| |||||||| ||| |||| || ||||||||| ||| |||||| |||||| |
|
|
| T |
43304 |
agtcatttcgatcaaaattatccaaacaacttgaattatgaaaaatcatttttcaatcaagatattcaaacataaatcatattatattaaagtcattt |
43401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 332 - 433
Target Start/End: Original strand, 33991 - 34092
Alignment:
| Q |
332 |
tcacactcaaaagtaatttggatctaaattatccaaacaacttgaataatgaaaaatcacttttcaattaaggtattaaatcataaatcacgttacatta |
431 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||| || |||||||| ||||||||| |
|
|
| T |
33991 |
tcacactcaaaagtaattttgatctaaattatccaaataacttgaattatgaaaaatcacttttcaatcaagctatccaaatataaatcatgttacatta |
34090 |
T |
 |
| Q |
432 |
aa |
433 |
Q |
| |
|
|| |
|
|
| T |
34091 |
aa |
34092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 479 - 536
Target Start/End: Original strand, 34180 - 34237
Alignment:
| Q |
479 |
acattagtttggagtttctacctgcacccctagattttgccatccacactatcagacc |
536 |
Q |
| |
|
|||||| || ||||||||||| ||||||| |||||||||||| | ||||||||||||| |
|
|
| T |
34180 |
acattacttaggagtttctacttgcacccgtagattttgccaacaacactatcagacc |
34237 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 33739 - 33829
Alignment:
| Q |
148 |
aaacgtgagttatgtact----aaatcaacttgtcgtggaaactctaaataattttaagtgattgttgttcgaaaatcgattcaaggttgga |
235 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||| |||| || |||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
33739 |
aaacgtgagttatgtacttaataaatcaacttgtt-tggatgctctttatcattttacgtgattgttgttccaaaatcgatttaaggttgga |
33829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 43082 - 43131
Alignment:
| Q |
186 |
ctctaaataattttaagtgattgttgttcgaaaatcgattcaaggttgga |
235 |
Q |
| |
|
|||| |||||||||| ||||||||||||| |||||| ||| ||||||||| |
|
|
| T |
43082 |
ctcttaataattttatgtgattgttgttccaaaatcaatttaaggttgga |
43131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 241 - 407
Target Start/End: Complemental strand, 3340223 - 3340056
Alignment:
| Q |
241 |
taatcaatttaccatttactcaagtgttgcactctcttattttgtcgatgttcctcttctttttc-aatcatttaaactaatttgtattaattcacactc |
339 |
Q |
| |
|
||||||||||| |||||| |||||||||||||||||||||||| | || |||||| |||||||| ||||||| |||| | ||| || ||||||||||| |
|
|
| T |
3340223 |
taatcaatttatcatttagtcaagtgttgcactctcttattttattgacgttccttttctttttttaatcattaaaaccagttttgataaattcacactc |
3340124 |
T |
 |
| Q |
340 |
aaaagtaatttggatctaaattatccaaacaacttgaataatgaaaaatcacttttcaattaaggtat |
407 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| ||||||| | |||||||||| ||||||| |
|
|
| T |
3340123 |
aaaagtaattttaatctaaattatccaaacaacttgaattatgaaaatttacttttcaatcaaggtat |
3340056 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 479 - 539
Target Start/End: Complemental strand, 3339941 - 3339881
Alignment:
| Q |
479 |
acattagtttggagtttctacctgcacccctagattttgccatccacactatcagacccat |
539 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||||||| ||| | |||||||||||| |
|
|
| T |
3339941 |
acattagttaggagtttctacatgcacccctagattttgccaaccatattatcagacccat |
3339881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 169
Target Start/End: Complemental strand, 3340396 - 3340362
Alignment:
| Q |
135 |
agttcacaagatcaaacgtgagttatgtactaaat |
169 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |
|
|
| T |
3340396 |
agttcacatgatcaaacgtgagttatgtactaaat |
3340362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 274
Target Start/End: Complemental strand, 7473140 - 7473110
Alignment:
| Q |
244 |
tcaatttaccatttactcaagtgttgcactc |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
7473140 |
tcaatttaccatttactcaagtgttgcactc |
7473110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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