View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4413-Insertion-6 (Length: 337)
Name: NF4413-Insertion-6
Description: NF4413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4413-Insertion-6 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 66 - 337
Target Start/End: Complemental strand, 17227476 - 17227205
Alignment:
| Q |
66 |
attaataacactcatagcccacttctttctcccatgcacttgtcctcttcatttcaacttcaacccactcctcttcactct-ttctccaaatttaatttt |
164 |
Q |
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| T |
17227476 |
attaataacacccatagcccacttctttctcccatgcacttgtcctcttcatt-caacttcaacccactcctcttcactctcttcgccaaatttaatttt |
17227378 |
T |
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| Q |
165 |
attatcataccttagcaacattacaaaaaacatataaccacttttatttatttctctcttaataaatactattcccttactctccatactcatttcacat |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17227377 |
attatcataccttagcaacattacaaaaaacatataaccacttttatttatttctctcttaataaatactattcccttactctccatactcatttcacat |
17227278 |
T |
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| Q |
265 |
aacttctcttcactttctccccttctttctctgacaaccaaccaacctcatttcatctctttctctttattta |
337 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17227277 |
aacttctcttcactttcttcccttctttctctgacaaccaaccaacctcatttcatctctttctctttattta |
17227205 |
T |
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