View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4413_high_8 (Length: 250)
Name: NF4413_high_8
Description: NF4413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4413_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 53055699 - 53055940
Alignment:
| Q |
1 |
attattagaataaagtagaaactaatctaagaatgtgagtacatgaaccatctaaattcagtggtccatgtagagttgaaaggttacaaatacaaagaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53055699 |
attattagaataaagtagaaactaatctaagaatgtgaatacatgaaccatctaaattcagtggtccatgtagagttgaaaggttacaaatacaaagaaa |
53055798 |
T |
|
| Q |
101 |
caaacaagttaataaacttctatttaagctgtaaaccttgagtaaatgtcacactgttgctcctaatggggttggttgtgtcactgcattctcctaattg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
53055799 |
caaacaagttaataaacttctatttaagctgtaaaccttgagtaaatgtcacactgttactcctaatggggttggttgtgtcactgcattctcctaattg |
53055898 |
T |
|
| Q |
201 |
aagtttcatattagaattcttaagctggctacctcctatgct |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
53055899 |
aagtttcatattagaattcttaagctggctacctcctatgct |
53055940 |
T |
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