View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4413_low_10 (Length: 219)

Name: NF4413_low_10
Description: NF4413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4413_low_10
NF4413_low_10
[»] chr4 (23 HSPs)
chr4 (1-200)||(45830194-45830393)
chr4 (1-59)||(50678777-50678835)
chr4 (1-67)||(36096473-36096539)
chr4 (1-59)||(56505691-56505749)
chr4 (1-58)||(293215-293272)
chr4 (3-60)||(16555512-16555569)
chr4 (1-34)||(24775781-24775814)
chr4 (1-58)||(36095816-36095873)
chr4 (1-62)||(39744463-39744524)
chr4 (1-57)||(50679422-50679478)
chr4 (3-58)||(8488187-8488242)
chr4 (3-54)||(13198606-13198657)
chr4 (3-58)||(13198906-13198961)
chr4 (3-34)||(22681597-22681628)
chr4 (1-56)||(43292038-43292093)
chr4 (5-63)||(47219203-47219261)
chr4 (1-62)||(9023239-9023300)
chr4 (1-58)||(9023678-9023735)
chr4 (4-57)||(23540253-23540306)
chr4 (1-58)||(43051250-43051307)
chr4 (1-29)||(169437-169465)
chr4 (1-57)||(4239364-4239420)
chr4 (1-57)||(16555815-16555871)
[»] chr8 (23 HSPs)
chr8 (1-62)||(22851385-22851446)
chr8 (1-62)||(9822743-9822804)
chr8 (1-58)||(9823359-9823416)
chr8 (1-62)||(39724046-39724107)
chr8 (5-61)||(13026631-13026687)
chr8 (3-63)||(41662101-41662161)
chr8 (1-63)||(13027279-13027341)
chr8 (3-57)||(15156185-15156239)
chr8 (3-68)||(12281426-12281491)
chr8 (3-60)||(15155880-15155937)
chr8 (1-57)||(3307338-3307394)
chr8 (1-59)||(13937387-13937445)
chr8 (1-67)||(23123328-23123394)
chr8 (3-57)||(37752416-37752470)
chr8 (3-57)||(41662403-41662457)
chr8 (3-57)||(43245871-43245925)
chr8 (1-34)||(6092798-6092831)
chr8 (5-58)||(12281123-12281176)
chr8 (3-63)||(18020088-18020146)
chr8 (3-67)||(34313755-34313817)
chr8 (1-54)||(34498125-34498178)
chr8 (3-55)||(765736-765788)
chr8 (1-29)||(25439124-25439152)
[»] chr7 (24 HSPs)
chr7 (1-70)||(44599476-44599545)
chr7 (1-62)||(13863308-13863369)
chr7 (1-58)||(44600133-44600190)
chr7 (3-61)||(9412325-9412383)
chr7 (1-61)||(8643764-8643824)
chr7 (1-61)||(46816309-46816369)
chr7 (3-58)||(9412022-9412077)
chr7 (3-57)||(3687656-3687710)
chr7 (1-59)||(33628658-33628716)
chr7 (1-34)||(5349731-5349764)
chr7 (1-58)||(13863955-13864011)
chr7 (1-58)||(16198975-16199032)
chr7 (1-58)||(17156966-17157023)
chr7 (1-58)||(20419322-20419379)
chr7 (1-58)||(22740155-22740212)
chr7 (9-62)||(23686723-23686776)
chr7 (1-34)||(30857902-30857935)
chr7 (1-34)||(35080221-35080254)
chr7 (4-57)||(38191566-38191619)
chr7 (1-29)||(13744231-13744259)
chr7 (1-29)||(18863995-18864023)
chr7 (1-29)||(22740589-22740617)
chr7 (1-29)||(36527411-36527439)
chr7 (1-29)||(48359347-48359375)
[»] chr2 (23 HSPs)
chr2 (1-61)||(26841583-26841643)
chr2 (1-59)||(2639480-2639538)
chr2 (1-63)||(18055314-18055376)
chr2 (1-58)||(18296691-18296748)
chr2 (3-68)||(20347152-20347217)
chr2 (1-58)||(2638819-2638876)
chr2 (1-34)||(7591848-7591881)
chr2 (1-54)||(26692399-26692452)
chr2 (5-62)||(29230277-29230334)
chr2 (4-68)||(32672831-32672895)
chr2 (1-57)||(26842236-26842292)
chr2 (3-59)||(30190921-30190977)
chr2 (5-60)||(17346037-17346091)
chr2 (1-56)||(18296077-18296132)
chr2 (3-58)||(20347464-20347519)
chr2 (1-66)||(24832321-24832387)
chr2 (1-63)||(41790910-41790972)
chr2 (1-34)||(7591224-7591257)
chr2 (1-58)||(8851580-8851637)
chr2 (1-29)||(7664671-7664699)
chr2 (3-67)||(11883926-11883989)
chr2 (1-29)||(18750124-18750152)
chr2 (1-29)||(41790518-41790546)
[»] chr6 (7 HSPs)
chr6 (1-64)||(33828983-33829046)
chr6 (1-59)||(33829634-33829692)
chr6 (3-58)||(18241853-18241908)
chr6 (1-58)||(7654546-7654603)
chr6 (1-29)||(2354808-2354836)
chr6 (1-57)||(3403717-3403773)
chr6 (3-59)||(3403989-3404045)
[»] chr5 (18 HSPs)
chr5 (1-64)||(18816945-18817008)
chr5 (1-57)||(18817609-18817665)
chr5 (3-63)||(25116061-25116121)
chr5 (3-63)||(25175151-25175211)
chr5 (3-59)||(33324838-33324894)
chr5 (3-62)||(5187830-5187889)
chr5 (3-58)||(18433316-18433371)
chr5 (1-59)||(11351425-11351483)
chr5 (4-54)||(23011383-23011432)
chr5 (1-62)||(12498562-12498623)
chr5 (1-58)||(19514961-19515018)
chr5 (5-34)||(31569929-31569958)
chr5 (5-58)||(34147512-34147565)
chr5 (1-29)||(10098939-10098967)
chr5 (1-57)||(18433015-18433071)
chr5 (3-59)||(25115755-25115811)
chr5 (3-59)||(25174847-25174903)
chr5 (1-29)||(26570757-26570785)
[»] chr1 (18 HSPs)
chr1 (1-67)||(6002227-6002293)
chr1 (1-62)||(48190766-48190827)
chr1 (1-58)||(49284408-49284465)
chr1 (1-59)||(48191353-48191411)
chr1 (1-58)||(8108991-8109048)
chr1 (1-58)||(39691998-39692055)
chr1 (3-62)||(17518298-17518356)
chr1 (3-66)||(31848192-31848255)
chr1 (3-58)||(47955305-47955360)
chr1 (1-35)||(49285053-49285087)
chr1 (1-29)||(20480195-20480223)
chr1 (1-29)||(26814722-26814750)
chr1 (1-29)||(28634155-28634183)
chr1 (1-65)||(32163041-32163105)
chr1 (1-61)||(44911021-44911081)
chr1 (3-59)||(47955608-47955664)
chr1 (1-29)||(50615619-50615647)
chr1 (1-29)||(50623447-50623475)
[»] chr3 (19 HSPs)
chr3 (5-61)||(14015690-14015746)
chr3 (3-57)||(10293608-10293662)
chr3 (5-62)||(47665906-47665963)
chr3 (3-62)||(10293909-10293968)
chr3 (3-57)||(20969019-20969073)
chr3 (1-62)||(21895652-21895714)
chr3 (1-59)||(40848959-40849017)
chr3 (1-34)||(1928432-1928465)
chr3 (4-57)||(8314013-8314066)
chr3 (1-62)||(10348797-10348858)
chr3 (10-63)||(10771498-10771550)
chr3 (1-30)||(21896509-21896538)
chr3 (1-62)||(28702273-28702333)
chr3 (1-58)||(53687887-53687944)
chr3 (1-29)||(3353155-3353183)
chr3 (1-29)||(22429594-22429622)
chr3 (1-29)||(26007209-26007237)
chr3 (1-29)||(42673294-42673322)
chr3 (1-29)||(53766191-53766219)
[»] scaffold0802 (2 HSPs)
scaffold0802 (3-57)||(1118-1172)
scaffold0802 (3-57)||(1420-1474)
[»] scaffold1221 (1 HSPs)
scaffold1221 (1-57)||(1511-1566)
[»] scaffold0328 (2 HSPs)
scaffold0328 (1-57)||(6152-6208)
scaffold0328 (1-57)||(6793-6849)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-34)||(411945-411976)
[»] scaffold0110 (1 HSPs)
scaffold0110 (3-60)||(45807-45863)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-58)||(38693-38750)
[»] scaffold0001 (1 HSPs)
scaffold0001 (7-59)||(439203-439255)


Alignment Details
Target: chr4 (Bit Score: 172; Significance: 1e-92; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 45830194 - 45830393
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaataaaatgttttatcagcgaatatttcatctcatcacat 100  Q
    |||||||| |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45830194 atggggtgtaaaatcgcacaattgacaaaagataggggtgaaaagtgcgattaagcctaaaataaaatgttttatcagcgaatatttcatctcatcacat 45830293  T
Q  101 gaaaggaaaatgtcaaaatagacaataaattgctacaaatgaatgtctatctattttttaaagagccttgcactgaaactcacacaaactatatgcagaa 200  Q
    |||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45830294 gaaaggaaaatgtcaaaatagacaataatttattacaaatgaatgtctatctattttttaaagagccttgcactgaaactcacacaaactatatgcagaa 45830393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 50678835 - 50678777
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| ||||||||||    
T  50678835 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 50678777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36096473 - 36096539
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaataaaa 67  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| ||||| || |||| ||||    
T  36096473 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccaaaaaaaaaa 36096539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 56505749 - 56505691
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    |||||||||||||||||||||||| |||||||||  ||  |||||||| ||||||||||    
T  56505749 atggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 56505691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 293215 - 293272
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||||||||  |||  || ||||||||| |||||||||    
T  293215 atggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcct 293272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 16555569 - 16555512
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaa 60  Q
    ||||||||||||||||||||| ||||||||||  ||  |||||||| |||||||||||    
T  16555569 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcctaa 16555512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 24775781 - 24775814
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagata 34  Q
    ||||||||||||||||||||||||||||||||||    
T  24775781 atggggtgcaaaatcgcacaattgacaaaagata 24775814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 36095873 - 36095816
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||| |||||||||  ||| |||| ||| |||||||||    
T  36095873 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 36095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39744463 - 39744524
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    |||||||||||||||||||||||||||||  |||  ||  |||||||| |||||||||||||    
T  39744463 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctaaaa 39744524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 50679422 - 50679478
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||| ||||||| |||||||||  ||| |||||||| ||||||||    
T  50679422 atggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 8488242 - 8488187
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    ||||||||||||||||||||| ||||||||||| |  ||||| ||| |||||||||    
T  8488242 ggggtgcaaaatcgcacaattaacaaaagatatggaaaaaaaatgcaattaagcct 8488187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 13198657 - 13198606
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaa 54  Q
    |||||||||||||||||||||| ||||||||| |||  |||||||| |||||    
T  13198657 ggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgcaattaa 13198606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 13198906 - 13198961
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    ||||||||||||||||||||| ||||||||||  ||  |||||||| |||||||||    
T  13198906 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 13198961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 22681628 - 22681597
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagata 34  Q
    ||||||||||||||||||||||||||||||||    
T  22681628 ggggtgcaaaatcgcacaattgacaaaagata 22681597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 43292093 - 43292038
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagc 56  Q
    |||||||||||||||||||||||||||||  |||  || ||||||||| |||||||    
T  43292093 atggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaagc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 47219203 - 47219261
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaat 63  Q
    |||||||||||||||||||  ||||||||| |||| |||| ||| ||||| ||||||||    
T  47219203 ggtgcaaaatcgcacaattagcaaaagatagaggtgaaaaatgcaattaaacctaaaat 47219261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9023300 - 9023239
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    |||||||||||||||||||||||| ||||  |||  ||  |||||||| |||||||||||||    
T  9023300 atggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcctaaaa 9023239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9023678 - 9023735
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||||||||  |||  ||  |||||||| |||||||||    
T  9023678 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 9023735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 23540253 - 23540306
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    ||||||||||||||||||||||||||  |||  ||| |||||||| ||||||||    
T  23540253 gggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaagcc 23540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43051250 - 43051307
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    ||||||||||||||| |||||||| |||||||||  ||| |||| ||| |||||||||    
T  43051250 atggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcct 43051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 169437 - 169465
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  169437 atggggtgcaaaatcgcacaattgacaaa 169465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4239364 - 4239420
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||||||||||| ||||  |||  || ||||||||| ||||||||    
T  4239364 atggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4239420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16555815 - 16555871
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||||||||||  |||||||||  ||  |||||||| ||||||||    
T  16555815 atggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22851446 - 22851385
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||| |||||||| ||||    
T  22851446 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagccaaaaa 22851385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 9822804 - 9822743
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    ||||||||||||||||||||||||| ||||||||  ||| |||||||| |||||||| ||||    
T  9822804 atggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagccaaaaa 9822743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9823359 - 9823416
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| |||||||||    
T  9823359 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 9823416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39724046 - 39724107
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| |||||||| ||||    
T  39724046 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaaa 39724107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 13026687 - 13026631
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaa 61  Q
    |||||||||||||||||||| |||||||||  ||| |||||||| ||||||||||||    
T  13026687 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctaaa 13026631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 41662161 - 41662101
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaat 63  Q
    ||||||||||||||||||||| ||||||||||| || |||| |||| ||||||||| ||||    
T  41662161 ggggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtgcaattaagccttaaat 41662101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13027279 - 13027341
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaat 63  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| ||||| || |||||    
T  13027279 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccaaaaat 13027341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 15156185 - 15156239
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    ||||||||||||||||||||||||||||||||  ||  |||||||| ||||||||    
T  15156185 ggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaagcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 12281426 - 12281491
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaataaaat 68  Q
    ||||||||||||||||||||| ||||||||||  ||  |||||||| |||||||| |||| |||||    
T  12281426 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagccaaaaaaaaaat 12281491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 15155937 - 15155880
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaa 60  Q
    ||||||||||||||||||||| ||||||||||  ||  |||||||| |||||||||||    
T  15155937 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctaa 15155880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3307394 - 3307338
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    ||||| ||||||||||||||||||||||||||||  ||| |||| ||| ||||||||    
T  3307394 atgggatgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaagcc 3307338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13937387 - 13937445
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    |||||||||||| ||||||||||||||||| |||  ||  |||||||| ||||||||||    
T  13937387 atggggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagccta 13937445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23123394 - 23123328
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaataaaa 67  Q
    |||||||| |||||||||||||||||||||||||   |  |||||||| |||||||| || ||||||    
T  23123394 atggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagccaaagataaaa 23123328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 37752416 - 37752470
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    ||||||||||||||||||||| ||||||||||  ||  |||||||| ||||||||    
T  37752416 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 41662403 - 41662457
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||||||||| |||||||||  ||  |||||||| ||||||||    
T  41662403 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 43245925 - 43245871
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||||||||  |||||||||  || ||||||||| ||||||||    
T  43245925 ggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaagcc 43245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6092831 - 6092798
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagata 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  6092831 atgggatgcaaaatcgcacaattgacaaaagata 6092798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 12281176 - 12281123
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||| |||||||||  ||  |||||||| |||||||||    
T  12281176 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 12281123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 18020088 - 18020146
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaat 63  Q
    ||||||||||||||||||||| |||||||  |||||  |||||||| ||||||||| ||||    
T  18020088 ggggtgcaaaatcgcacaattaacaaaag--atagggtaaaagtgcaattaagccttaaat 18020146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 34313817 - 34313755
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaataaaa 67  Q
    ||||||||||||||||||||| |||||||  |||||  |||||||| |||||||| |||| ||||    
T  34313817 ggggtgcaaaatcgcacaattaacaaaag--ataggggaaaagtgcaattaagccaaaaaaaaaa 34313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34498178 - 34498125
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaa 54  Q
    |||||||||||||||||||||||||||||  |||  || ||||||||| |||||    
T  34498178 atggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 765788 - 765736
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaag 55  Q
    |||||||||||||||||||||| |||||||||  ||  |||||||| ||||||    
T  765788 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 25439124 - 25439152
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  25439124 atggggtgcaaaatcgcacaattgacaaa 25439152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44599545 - 44599476
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaataaaatgt 70  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| |||||||| ||||| ||||||    
T  44599545 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaaattaaatgt 44599476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13863369 - 13863308
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    |||||||||||||||||||||||| |||||||||  ||| |||| ||| |||||||||||||    
T  13863369 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcctaaaa 13863308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44600133 - 44600190
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| |||||||||    
T  44600133 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 44600190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 9412325 - 9412383
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaa 61  Q
    |||||||||||||||||||||| |||||||||  ||  |||||||| ||||||||||||    
T  9412325 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctaaa 9412383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8643764 - 8643824
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaa 61  Q
    ||||||||||||||||||||||||  ||||||||  | | |||||||| ||||||||||||    
T  8643764 atggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagcctaaa 8643824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 46816309 - 46816369
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaa 61  Q
    |||||||||||||||||| |||||  ||||||||  || ||||||||| ||||||||||||    
T  46816309 atggggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaagcctaaa 46816369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 9412077 - 9412022
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    ||||||||||||||||||||| ||||||||||  ||  |||||||| |||||||||    
T  9412077 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcct 9412022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 3687656 - 3687710
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||||||||| |||||||||  ||  |||||||| ||||||||    
T  3687656 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33628658 - 33628716
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    |||||||||||||||||||||||   |||||||| ||| ||||||||| ||| ||||||    
T  33628658 atggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatttagccta 33628716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 5349731 - 5349764
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagata 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  5349731 atggggtgcaaaatcgcacaattaacaaaagata 5349764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13863955 - 13864011
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||| ||||||||||| |||||||||  ||| |||||||| |||||||||    
T  13863955 atggggtgcaaa-tcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 13864011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16198975 - 16199032
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||| ||||  |||  || ||||||||| |||||||||    
T  16198975 atggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcct 16199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17157023 - 17156966
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||||||||  |||  ||  |||||||| |||||||||    
T  17157023 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 17156966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20419322 - 20419379
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||||||||  |||  ||  |||||||| |||||||||    
T  20419322 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 20419379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22740212 - 22740155
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||||||||  |||  ||  |||||||| |||||||||    
T  22740212 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 22740155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 23686723 - 23686776
Alignment:
Q  9 caaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    |||||||||||||||  |||||||||  || ||||||||| |||||||||||||    
T  23686723 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcctaaaa 23686776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30857902 - 30857935
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagata 34  Q
    |||||||||||||| |||||||||||||||||||    
T  30857902 atggggtgcaaaattgcacaattgacaaaagata 30857935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 35080221 - 35080254
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagata 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  35080221 atggggtgcaaaatcgcacaattaacaaaagata 35080254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 38191566 - 38191619
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    ||||||||||||||| |||| ||||||||||  |||||||| ||| ||||||||    
T  38191566 gggtgcaaaatcgcataattaacaaaagataggggtaaaaaatgcaattaagcc 38191619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 13744231 - 13744259
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  13744231 atggggtgcaaaatcgcacaattgacaaa 13744259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 18864023 - 18863995
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  18864023 atggggtgcaaaatcgcacaattgacaaa 18863995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 22740589 - 22740617
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  22740589 atggggtgcaaaatcgcacaattgacaaa 22740617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 36527439 - 36527411
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  36527439 atggggtgcaaaatcgcacaattgacaaa 36527411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 48359375 - 48359347
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  48359375 atggggtgcaaaatcgcacaattgacaaa 48359347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26841643 - 26841583
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaa 61  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| ||||||||||||    
T  26841643 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctaaa 26841583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2639480 - 2639538
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| ||||||||||    
T  2639480 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 2639538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18055314 - 18055376
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaat 63  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||| ||||| || |||||    
T  18055314 atggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaaaccaaaaat 18055376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18296691 - 18296748
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| |||||||||    
T  18296691 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 18296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 20347217 - 20347152
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaataaaat 68  Q
    ||||||||||||||||||||| |||||||||| |||  |||||||  |||||||||| ||||||||    
T  20347217 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagcctataataaaat 20347152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2638876 - 2638819
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||| |||||||||  ||| |||| ||| |||||||||    
T  2638876 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 2638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 7591848 - 7591881
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagata 34  Q
    ||||||||||||||||||||||||||||||||||    
T  7591848 atggggtgcaaaatcgcacaattgacaaaagata 7591881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26692452 - 26692399
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaa 54  Q
    |||||||||||||||||||||||||||||  ||| ||| ||||||||| |||||    
T  26692452 atggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaa 26692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 29230334 - 29230277
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    ||||||||||| |||||||||||||||||| ||   |||||||| |||||||||||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaagcctaaaa 29230277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 32672895 - 32672831
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagatataggta-aaaagtgcgattaagcctaaaataaaat 68  Q
    |||||||||||||||||||| |||||||||| ||| | |||||||| |||||||| ||||||||||    
T  32672895 gggtgcaaaatcgcacaattaacaaaagata-aggaacaaaagtgcaattaagccaaaaataaaat 32672831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26842236 - 26842292
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||||||||||| |||||||||  ||| ||||||||  |||||||    
T  26842236 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 30190977 - 30190921
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    |||||||||||||||||||||| |||||||||  ||  |||||||| ||||||||||    
T  30190977 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 30190921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 17346037 - 17346091
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaa 60  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||| |||||||||||    
T  17346037 ggtgcaaaatcgcacaattagcaaaagataaagg-aaaaagtgcaattaagcctaa 17346091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18296132 - 18296077
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagc 56  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||| | |||||||    
T  18296132 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 20347464 - 20347519
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||| |||||||||  ||  |||||||| |||||||||    
T  20347464 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 20347519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24832387 - 24832321
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc-taaaataaa 66  Q
    |||||||||||||||||||||||  |||||||||  ||  |||||||| |||||||| |||||||||    
T  24832387 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccttaaaataaa 24832321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41790910 - 41790972
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaat 63  Q
    |||||| ||||||||||||||||| ||||| |||  ||  |||||||| ||||||||||||||    
T  41790910 atggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagcctaaaat 41790972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 7591257 - 7591224
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagata 34  Q
    |||||||||||||||||||||||| |||||||||    
T  7591257 atggggtgcaaaatcgcacaattggcaaaagata 7591224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8851580 - 8851637
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||||||||  |||  ||  |||||||| |||||||||    
T  8851580 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 8851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 7664671 - 7664699
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  7664671 atggggtgcaaaatcgcacaattgacaaa 7664699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 11883926 - 11883989
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaataaaa 67  Q
    |||||||||||||||||||||  |||||||||  ||  |||||||| |||||||| |||||||||    
T  11883926 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc-aaaataaaa 11883989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 18750124 - 18750152
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  18750124 atggggtgcaaaatcgcacaattgacaaa 18750152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 41790546 - 41790518
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  41790546 atggggtgcaaaatcgcacaattgacaaa 41790518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33829046 - 33828983
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaata 64  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| |||||||| ||||||    
T  33829046 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaaata 33828983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33829634 - 33829692
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| ||||||||||    
T  33829634 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 33829692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 18241908 - 18241853
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    ||||||||||||||||||||| ||||||||||  ||  |||||||| |||||||||    
T  18241908 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18241853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7654546 - 7654603
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||||||||  |||  ||  |||||||| |||||||||    
T  7654546 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 7654603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 2354808 - 2354836
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  2354808 atggggtgcaaaatcgcacaattgacaaa 2354836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3403773 - 3403717
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||||||||||  |||||||||  ||  |||||||| ||||||||    
T  3403773 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 3403989 - 3404045
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    |||||||||||||||||||||  |||||||||  ||  |||||||| ||||||||||    
T  3403989 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccta 3404045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18817008 - 18816945
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaata 64  Q
    |||||||||||||||||||||||| |||||||||  ||| |||| ||| |||||||||||||||    
T  18817008 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcctaaaata 18816945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18817609 - 18817665
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| ||||||||    
T  18817609 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 25116061 - 25116121
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaat 63  Q
    ||||||||||||||||||||| ||||||||||  ||  |||||||| ||||||||||||||    
T  25116061 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctaaaat 25116121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 25175151 - 25175211
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaat 63  Q
    ||||||||||||||||||||| ||||||||||  ||  |||||||| ||||||||||||||    
T  25175151 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctaaaat 25175211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 33324838 - 33324894
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    ||||||||||||| ||||||||||||||||||  || ||||||||| ||||||||||    
T  33324838 ggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagccta 33324894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 5187830 - 5187889
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    |||||||||||| |||||||| ||||||||||  ||  |||||||| |||||||||||||    
T  5187830 ggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagcctaaaa 5187889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 18433316 - 18433371
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    ||||||||||||||||||||| ||||||||||  ||  |||||||| |||||||||    
T  18433316 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11351425 - 11351483
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    |||||||||||||||||||||||| |||||||||   || |||||||| ||||| ||||    
T  11351425 atggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaaaccta 11351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 23011383 - 23011432
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaa 54  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||| |||||    
T  23011383 gggtgcaaaatcgcacaattaacaaaagata-agggaaaaagtgcaattaa 23011432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12498623 - 12498562
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    |||||||||||||||||||||||| ||||  |||  ||  |||||||| |||||||||||||    
T  12498623 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctaaaa 12498562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19514961 - 19515018
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||||||||  |||  ||  |||||||| |||||||||    
T  19514961 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 19515018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 31569958 - 31569929
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagata 34  Q
    ||||||||||||||||||||||||||||||    
T  31569958 ggtgcaaaatcgcacaattgacaaaagata 31569929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 34147512 - 34147565
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||||  |||  || ||||||||| |||||||||    
T  34147512 ggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcct 34147565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 10098939 - 10098967
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  10098939 atggggtgcaaaatcgcacaattgacaaa 10098967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18433071 - 18433015
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||||||||||  |||||||||  ||  |||||||| ||||||||    
T  18433071 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 25115811 - 25115755
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    ||||||||||||| |||||||| |||||||||  ||  |||||||| ||||||||||    
T  25115811 ggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagccta 25115755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 25174903 - 25174847
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    ||||||||||||| |||||||| |||||||||  ||  |||||||| ||||||||||    
T  25174903 ggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagccta 25174847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 26570785 - 26570757
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  26570785 atggggtgcaaaatcgcacaattgacaaa 26570757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6002293 - 6002227
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaataaaa 67  Q
    ||||||||||||||| ||||||||||||||||||  ||| |||||||| |||||||| |||| ||||    
T  6002293 atggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagccaaaaaaaaaa 6002227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48190827 - 48190766
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| |||||||| ||||    
T  48190827 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaaa 48190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49284465 - 49284408
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||| |||||||||  ||| |||||||| |||||||||    
T  49284465 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 49284408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 48191353 - 48191411
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    ||||||||||||||||||| |||| |||||||||  ||| |||||||| ||||||||||    
T  48191353 atggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagccta 48191411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8108991 - 8109048
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||| |||||||||  ||  |||||||| |||||||||    
T  8108991 atggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 8109048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 39691998 - 39692055
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||||||||| |||  ||  |||||||| |||||||||    
T  39691998 atggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagcct 39692055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 17518356 - 17518298
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    ||||||||||||||||||||| |||||||||| |||  ||| |||| |||||||||||||    
T  17518356 ggggtgcaaaatcgcacaattaacaaaagata-aggggaaaggtgcaattaagcctaaaa 17518298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 31848192 - 31848255
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaataaa 66  Q
    |||||||||||||| |||||| ||||||||||  ||  |||||||| |||||||||| ||||||    
T  31848192 ggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaagcctataataaa 31848255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 47955360 - 47955305
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||| |||||||||  ||  |||||||| |||||||||    
T  47955360 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 47955305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 49285053 - 49285087
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  49285053 atggggtgcaaaatcgcacaattggcaaaagatat 49285087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 20480223 - 20480195
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  20480223 atggggtgcaaaatcgcacaattgacaaa 20480195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 26814750 - 26814722
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  26814750 atggggtgcaaaatcgcacaattgacaaa 26814722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 28634155 - 28634183
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  28634155 atggggtgcaaaatcgcacaattgacaaa 28634183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 32163041 - 32163105
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaataa 65  Q
    |||||||||||||||||||||||| ||||  |||  ||  |||||||| |||||||||| |||||    
T  32163041 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctacaataa 32163105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 44911081 - 44911021
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaa 61  Q
    |||||||||||||||||||||||| ||||| |||  ||   ||||||| ||||||||||||    
T  44911081 atggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagcctaaa 44911021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 47955608 - 47955664
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    ||||||||||||||||||||| | ||||||||  ||  |||||||| ||||||||||    
T  47955608 ggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccta 47955664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 50615619 - 50615647
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  50615619 atggggtgcaaaatcgcacaattgacaaa 50615647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 50623447 - 50623475
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  50623447 atggggtgcaaaatcgcacaattgacaaa 50623475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 14015746 - 14015690
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaa 61  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||| ||||| ||||||    
T  14015746 ggtgcaaaatcgcacgattgacaaaagataaaggaaaaaagtgcaattaaacctaaa 14015690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 10293662 - 10293608
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    ||||||||||||||||||||||||||||||||  || ||||| ||| ||||||||    
T  10293662 ggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaattaagcc 10293608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 47665963 - 47665906
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    |||||||||||||||||||||||||  |||  || ||||||||| |||||||||||||    
T  47665963 ggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagcctaaaa 47665906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 10293909 - 10293968
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    ||||||||||||||||||||| ||||||||||  ||  |||||||| |||||||| ||||    
T  10293909 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccaaaaa 10293968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 20969019 - 20969073
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||||||||| |||||||||  ||  |||||||| ||||||||    
T  20969019 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21895714 - 21895652
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagata-taggtaaaaagtgcgattaagcctaaaa 62  Q
    ||||||||||||||| |||||||| ||||| ||| | || ||||||||| |||||||||||||    
T  21895714 atggggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagcctaaaa 21895652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 40848959 - 40849017
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    |||||||||||||||||||||||| ||||  ||| |||  |||||||| ||||||||||    
T  40848959 atggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagccta 40849017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1928432 - 1928465
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagata 34  Q
    |||||||||||||||||||||||| |||||||||    
T  1928432 atggggtgcaaaatcgcacaattggcaaaagata 1928465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 8314066 - 8314013
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    ||||||||||||||||||||||||||| |||  ||  |||||||| ||||||||    
T  8314066 gggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10348797 - 10348858
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    |||||||||||||||||||||||| ||||  ||||  | ||||||||| |||||||| ||||    
T  10348797 atggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaagccaaaaa 10348858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 10771550 - 10771498
Alignment:
Q  10 aaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaat 63  Q
    |||||||||||||||||||||||||  || ||||| ||| ||||||||||||||    
T  10771550 aaaatcgcacaattgacaaaagata-gggaaaaaaatgcaattaagcctaaaat 10771498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 21896509 - 21896538
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  21896509 atggggtgcaaaatcgcacaattgacaaaa 21896538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28702333 - 28702273
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaaaa 62  Q
    |||| ||||||||||||| ||||||||||||||| ||| ||||||||  |||||||| ||||    
T  28702333 atggagtgcaaaatcgcataattgacaaaagatagagg-aaaaagtgaaattaagccaaaaa 28702273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 53687944 - 53687887
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||||||||  |||  ||  |||||||| |||||||||    
T  53687944 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 53687887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 3353183 - 3353155
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  3353183 atggggtgcaaaatcgcacaattgacaaa 3353155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 22429594 - 22429622
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  22429594 atggggtgcaaaatcgcacaattgacaaa 22429622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 26007237 - 26007209
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  26007237 atggggtgcaaaatcgcacaattgacaaa 26007209  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 42673294 - 42673322
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  42673294 atggggtgcaaaatcgcacaattgacaaa 42673322  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 53766219 - 53766191
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaa 29  Q
    |||||||||||||||||||||||||||||    
T  53766219 atggggtgcaaaatcgcacaattgacaaa 53766191  T

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Target: scaffold0802 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 1172 - 1118
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    ||||||||||||||||||||| ||||||||||  || ||||||||| ||||||||    
T  1172 ggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaagcc 1118  T

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Target: scaffold0802; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 1420 - 1474
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||||||||| |||||||||  || ||||||||| ||||||||    
T  1420 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 1474  T

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Target: scaffold1221 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1566 - 1511
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    ||||||||||||||| |||||||| ||||||||| ||| ||||||||| ||||||||    
T  1566 atggggtgcaaaatcacacaattggcaaaagatagagg-aaaaagtgcaattaagcc 1511  T

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Target: scaffold0328 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6208 - 6152
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||| ||||||||||||||  ||||||||| |||| |||||||| ||||||||    
T  6208 atggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaagcc 6152  T

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Target: scaffold0328; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6793 - 6849
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcc 57  Q
    |||||||||||||||||||||||| |||||||||  ||| |||| ||| ||||||||    
T  6793 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 411976 - 411945
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagata 34  Q
    ||||||||||||||||||||||||||||||||    
T  411976 ggggtgcaaaatcgcacaattgacaaaagata 411945  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 45807 - 45863
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcctaa 60  Q
    |||||||||||||||||||||| |||||||||  ||  |||||||| |||||||||||    
T  45807 ggggtgcaaaatcgcacaattggcaaaagata-gggggaaaagtgcaattaagcctaa 45863  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 38693 - 38750
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagcct 58  Q
    |||||||||||||||||||||||| ||||  |||  || ||||||||| |||||||||    
T  38693 atggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcct 38750  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 439203 - 439255
Alignment:
Q  7 tgcaaaatcgcacaattgacaaaagatataggtaaaaagtgcgattaagccta 59  Q
    |||||||||||||||||  |||||||||  || ||||||||| ||||||||||    
T  439203 tgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagccta 439255  T

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