View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4414-Insertion-4 (Length: 534)

Name: NF4414-Insertion-4
Description: NF4414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4414-Insertion-4
NF4414-Insertion-4
[»] chr8 (54 HSPs)
chr8 (92-534)||(2540589-2541030)
chr8 (114-534)||(2531253-2531685)
chr8 (27-108)||(34343415-34343496)
chr8 (32-108)||(35448579-35448655)
chr8 (27-108)||(17656782-17656863)
chr8 (27-107)||(23567607-23567687)
chr8 (27-105)||(1672895-1672973)
chr8 (166-326)||(1829582-1829743)
chr8 (166-326)||(1864027-1864188)
chr8 (8-61)||(10586023-10586076)
chr8 (27-108)||(15809804-15809885)
chr8 (27-83)||(1773114-1773170)
chr8 (9-61)||(1773251-1773303)
chr8 (472-534)||(1827850-1827912)
chr8 (472-534)||(1862295-1862357)
chr8 (27-105)||(27506708-27506786)
chr8 (12-61)||(185914-185963)
chr8 (27-112)||(10585855-10585940)
chr8 (8-61)||(34343278-34343331)
chr8 (27-83)||(17792716-17792772)
chr8 (13-61)||(27506868-27506916)
chr8 (27-98)||(28979291-28979362)
chr8 (51-113)||(10586049-10586111)
chr8 (27-112)||(21120290-21120373)
chr8 (8-50)||(32644220-32644262)
chr8 (27-108)||(186045-186126)
chr8 (8-61)||(5106697-5106750)
chr8 (51-108)||(15808884-15808941)
chr8 (12-61)||(17656651-17656700)
chr8 (38-111)||(32644043-32644115)
chr8 (15-55)||(2541157-2541197)
chr8 (44-108)||(23347702-23347766)
chr8 (58-113)||(17792887-17792942)
chr8 (8-46)||(15808914-15808952)
chr8 (27-113)||(23504488-23504573)
chr8 (8-50)||(23504666-23504708)
chr8 (27-81)||(41642173-41642227)
chr8 (27-108)||(45409404-45409486)
chr8 (32-89)||(204950-205007)
chr8 (32-89)||(319787-319844)
chr8 (51-108)||(17656617-17656674)
chr8 (51-108)||(23567485-23567542)
chr8 (8-61)||(24473207-24473259)
chr8 (11-48)||(35116774-35116811)
chr8 (57-113)||(35448228-35448284)
chr8 (11-50)||(18757218-18757257)
chr8 (14-60)||(6783468-6783514)
chr8 (51-108)||(34343248-34343305)
chr8 (31-75)||(2541031-2541075)
chr8 (51-83)||(5106723-5106755)
chr8 (27-95)||(18161453-18161521)
chr8 (12-44)||(28979438-28979470)
chr8 (26-62)||(34647532-34647568)
chr8 (26-62)||(40022749-40022785)
[»] chr3 (39 HSPs)
chr3 (8-108)||(50416509-50416609)
chr3 (27-108)||(19012526-19012607)
chr3 (27-112)||(36185721-36185806)
chr3 (27-108)||(8036799-8036880)
chr3 (27-104)||(21175232-21175309)
chr3 (27-112)||(47225812-47225897)
chr3 (27-112)||(12974007-12974092)
chr3 (8-61)||(36185867-36185920)
chr3 (31-112)||(49053220-49053301)
chr3 (27-83)||(38345444-38345500)
chr3 (27-112)||(47924157-47924245)
chr3 (8-60)||(20127136-20127188)
chr3 (27-106)||(27437833-27437912)
chr3 (8-61)||(14743572-14743625)
chr3 (51-108)||(20127161-20127218)
chr3 (8-61)||(27446175-27446228)
chr3 (51-108)||(36185893-36185950)
chr3 (51-108)||(49053414-49053471)
chr3 (51-108)||(50416479-50416536)
chr3 (11-61)||(16653528-16653578)
chr3 (11-61)||(19012423-19012473)
chr3 (51-108)||(16653496-16653552)
chr3 (51-108)||(19012391-19012447)
chr3 (55-108)||(38345279-38345332)
chr3 (27-108)||(47729220-47729301)
chr3 (8-61)||(49053388-49053441)
chr3 (8-48)||(8036964-8037004)
chr3 (31-75)||(51681146-51681190)
chr3 (11-61)||(12974153-12974203)
chr3 (51-108)||(8036977-8037034)
chr3 (63-108)||(19384380-19384425)
chr3 (8-61)||(47924328-47924381)
chr3 (57-113)||(12974185-12974240)
chr3 (26-62)||(23755921-23755957)
chr3 (8-60)||(30794878-30794930)
chr3 (26-62)||(34562762-34562798)
chr3 (31-75)||(35221580-35221624)
chr3 (57-105)||(47924360-47924408)
chr3 (68-108)||(49450493-49450533)
[»] chr7 (37 HSPs)
chr7 (27-112)||(44426763-44426848)
chr7 (27-108)||(5728844-5728925)
chr7 (27-113)||(46004335-46004421)
chr7 (27-108)||(26945513-26945594)
chr7 (27-104)||(32604724-32604801)
chr7 (27-112)||(34227671-34227756)
chr7 (27-112)||(41065763-41065848)
chr7 (8-61)||(5728709-5728762)
chr7 (27-108)||(7843518-7843599)
chr7 (27-88)||(31365434-31365495)
chr7 (27-104)||(38837543-38837620)
chr7 (27-112)||(6620762-6620846)
chr7 (11-60)||(7843682-7843731)
chr7 (8-61)||(26945676-26945729)
chr7 (51-108)||(26945702-26945759)
chr7 (8-61)||(44426627-44426680)
chr7 (31-112)||(45478482-45478563)
chr7 (8-60)||(34227839-34227891)
chr7 (51-113)||(44426592-44426654)
chr7 (7-60)||(45478342-45478395)
chr7 (27-83)||(6846603-6846659)
chr7 (9-61)||(41065931-41065983)
chr7 (8-55)||(46004503-46004550)
chr7 (11-61)||(31192518-31192568)
chr7 (11-61)||(43742281-43742331)
chr7 (27-61)||(44140520-44140554)
chr7 (51-108)||(34227864-34227921)
chr7 (51-108)||(46004523-46004580)
chr7 (8-48)||(5728654-5728694)
chr7 (57-108)||(43742248-43742299)
chr7 (27-61)||(32091312-32091346)
chr7 (27-61)||(48830380-48830414)
chr7 (51-108)||(38837717-38837774)
chr7 (26-62)||(24360412-24360448)
chr7 (26-62)||(25779363-25779399)
chr7 (13-61)||(31365305-31365353)
chr7 (26-62)||(48830246-48830282)
[»] chr4 (82 HSPs)
chr4 (8-113)||(25715637-25715742)
chr4 (27-112)||(53865207-53865292)
chr4 (27-114)||(31762922-31763009)
chr4 (27-113)||(36309581-36309667)
chr4 (31-108)||(6841820-6841897)
chr4 (27-108)||(8165761-8165842)
chr4 (11-83)||(6806507-6806579)
chr4 (27-107)||(38010674-38010754)
chr4 (27-113)||(2124338-2124424)
chr4 (27-108)||(12722736-12722818)
chr4 (31-108)||(33883293-33883370)
chr4 (8-61)||(37059877-37059930)
chr4 (8-61)||(31763070-31763123)
chr4 (27-112)||(37059706-37059791)
chr4 (8-60)||(27872962-27873014)
chr4 (27-111)||(38563801-38563885)
chr4 (27-106)||(54895547-54895626)
chr4 (11-61)||(8166040-8166090)
chr4 (51-108)||(2124533-2124590)
chr4 (8-61)||(12722900-12722953)
chr4 (51-108)||(12722926-12722983)
chr4 (27-108)||(17109718-17109799)
chr4 (27-108)||(30779342-30779423)
chr4 (27-108)||(43375485-43375566)
chr4 (27-108)||(53526416-53526497)
chr4 (8-61)||(54895433-54895486)
chr4 (27-83)||(9967705-9967761)
chr4 (12-60)||(41025226-41025274)
chr4 (9-61)||(43374477-43374529)
chr4 (51-113)||(36924235-36924297)
chr4 (8-61)||(1492701-1492754)
chr4 (27-108)||(1492825-1492906)
chr4 (8-61)||(2124507-2124560)
chr4 (8-61)||(6841982-6842035)
chr4 (8-61)||(21995699-21995752)
chr4 (51-108)||(25715715-25715772)
chr4 (8-61)||(33883445-33883498)
chr4 (51-108)||(54895403-54895460)
chr4 (46-114)||(562768-562836)
chr4 (8-48)||(6768432-6768472)
chr4 (27-83)||(9812969-9813025)
chr4 (8-60)||(10374072-10374124)
chr4 (27-103)||(51076901-51076977)
chr4 (27-110)||(8157108-8157190)
chr4 (37-108)||(36924418-36924489)
chr4 (8-50)||(9813118-9813160)
chr4 (11-61)||(16474982-16475032)
chr4 (41-83)||(22007705-22007747)
chr4 (8-74)||(33871227-33871293)
chr4 (51-113)||(33871266-33871328)
chr4 (51-105)||(33883471-33883525)
chr4 (8-50)||(36309445-36309487)
chr4 (51-113)||(43374441-43374503)
chr4 (51-113)||(47567890-47567952)
chr4 (51-113)||(53865058-53865120)
chr4 (51-108)||(1492671-1492728)
chr4 (8-61)||(8157251-8157304)
chr4 (51-108)||(21995669-21995726)
chr4 (51-108)||(31763096-31763153)
chr4 (8-61)||(36924270-36924323)
chr4 (31-112)||(41025056-41025137)
chr4 (27-80)||(47568049-47568102)
chr4 (62-114)||(17109917-17109969)
chr4 (11-55)||(38563929-38563973)
chr4 (12-60)||(53865097-53865145)
chr4 (8-60)||(55660405-55660457)
chr4 (57-108)||(9813139-9813190)
chr4 (64-111)||(33819687-33819734)
chr4 (57-104)||(36309419-36309466)
chr4 (13-48)||(53526285-53526320)
chr4 (27-61)||(38010498-38010532)
chr4 (31-108)||(6768565-6768642)
chr4 (51-108)||(16475008-16475065)
chr4 (8-61)||(17109881-17109933)
chr4 (8-61)||(47567925-47567978)
chr4 (26-62)||(1728982-1729018)
chr4 (57-105)||(8157283-8157331)
chr4 (26-62)||(29826065-29826101)
chr4 (26-62)||(38010540-38010576)
chr4 (51-103)||(42788663-42788715)
chr4 (26-62)||(49137488-49137524)
chr4 (26-62)||(50644349-50644385)
[»] chr5 (55 HSPs)
chr5 (27-114)||(35662197-35662284)
chr5 (23-110)||(42746803-42746890)
chr5 (27-104)||(5630235-5630312)
chr5 (27-108)||(11660792-11660873)
chr5 (27-108)||(22695504-22695585)
chr5 (27-112)||(22830752-22830837)
chr5 (27-113)||(16552241-16552327)
chr5 (8-61)||(39086546-39086599)
chr5 (28-107)||(22671962-22672041)
chr5 (27-98)||(39166160-39166231)
chr5 (27-108)||(15059597-15059679)
chr5 (27-108)||(20134198-20134279)
chr5 (27-111)||(7286918-7287001)
chr5 (8-60)||(23155554-23155606)
chr5 (27-105)||(703732-703810)
chr5 (11-61)||(42746551-42746601)
chr5 (8-113)||(15559078-15559183)
chr5 (27-112)||(36864232-36864317)
chr5 (13-61)||(15059467-15059515)
chr5 (27-83)||(33857378-33857434)
chr5 (27-107)||(39861579-39861659)
chr5 (27-105)||(23155807-23155885)
chr5 (8-50)||(39861753-39861795)
chr5 (51-113)||(39861768-39861830)
chr5 (8-61)||(7286782-7286835)
chr5 (8-61)||(11660944-11660997)
chr5 (8-61)||(39166302-39166355)
chr5 (51-107)||(11660970-11661026)
chr5 (8-46)||(3340619-3340657)
chr5 (12-50)||(20134372-20134410)
chr5 (51-113)||(20134387-20134449)
chr5 (8-50)||(35662096-35662138)
chr5 (27-105)||(39086670-39086748)
chr5 (27-108)||(3340743-3340824)
chr5 (12-61)||(11376543-11376592)
chr5 (51-108)||(35662066-35662123)
chr5 (51-108)||(36864066-36864123)
chr5 (12-61)||(36864100-36864149)
chr5 (51-108)||(39086516-39086573)
chr5 (57-113)||(5411750-5411806)
chr5 (31-83)||(20696152-20696204)
chr5 (51-106)||(23155526-23155581)
chr5 (14-61)||(33857505-33857552)
chr5 (51-113)||(39166328-39166390)
chr5 (23-61)||(42746683-42746721)
chr5 (51-108)||(3340589-3340646)
chr5 (26-55)||(33868793-33868822)
chr5 (51-108)||(42746518-42746575)
chr5 (8-60)||(5411719-5411771)
chr5 (29-61)||(8949471-8949503)
chr5 (26-62)||(8949511-8949547)
chr5 (27-83)||(11376405-11376461)
chr5 (26-62)||(16668201-16668237)
chr5 (29-61)||(16668245-16668277)
chr5 (62-106)||(30783586-30783630)
[»] chr2 (50 HSPs)
chr2 (27-113)||(16111668-16111755)
chr2 (27-113)||(30777289-30777375)
chr2 (27-108)||(12449053-12449134)
chr2 (27-112)||(42364657-42364742)
chr2 (27-108)||(20661395-20661476)
chr2 (27-107)||(31711663-31711742)
chr2 (27-108)||(22588317-22588398)
chr2 (31-112)||(37867323-37867404)
chr2 (8-60)||(15252983-15253035)
chr2 (8-60)||(42364521-42364573)
chr2 (27-106)||(34726605-34726684)
chr2 (8-61)||(19246691-19246744)
chr2 (27-108)||(22596303-22596384)
chr2 (27-108)||(25575322-25575403)
chr2 (8-61)||(37867183-37867236)
chr2 (27-108)||(44915290-44915371)
chr2 (38-98)||(15252848-15252908)
chr2 (51-107)||(20661583-20661639)
chr2 (9-61)||(31711540-31711592)
chr2 (57-108)||(34726790-34726841)
chr2 (8-50)||(20661568-20661610)
chr2 (8-61)||(24183559-24183612)
chr2 (51-108)||(31783792-31783849)
chr2 (8-61)||(31783822-31783875)
chr2 (8-61)||(34726758-34726811)
chr2 (51-108)||(44915479-44915536)
chr2 (9-61)||(3147248-3147300)
chr2 (9-61)||(22596466-22596518)
chr2 (10-50)||(35126666-35126706)
chr2 (14-61)||(1095330-1095377)
chr2 (51-114)||(42364485-42364548)
chr2 (51-113)||(20194015-20194077)
chr2 (51-105)||(22588506-22588560)
chr2 (27-108)||(31783946-31784030)
chr2 (51-108)||(22596492-22596549)
chr2 (51-108)||(31711509-31711566)
chr2 (27-83)||(1095203-1095259)
chr2 (8-48)||(12449218-12449258)
chr2 (8-60)||(16111542-16111594)
chr2 (27-71)||(24183433-24183477)
chr2 (8-60)||(44915454-44915506)
chr2 (41-108)||(15150269-15150336)
chr2 (14-61)||(30777488-30777535)
chr2 (51-105)||(19246664-19246718)
chr2 (8-50)||(20194000-20194042)
chr2 (8-50)||(22588491-22588533)
chr2 (27-61)||(36636172-36636206)
chr2 (51-104)||(16111516-16111569)
chr2 (27-80)||(20570929-20570982)
chr2 (26-62)||(43823329-43823365)
[»] chr1 (68 HSPs)
chr1 (27-113)||(17893066-17893152)
chr1 (27-113)||(45849102-45849188)
chr1 (27-108)||(33157144-33157225)
chr1 (27-112)||(18928921-18929004)
chr1 (8-61)||(17893235-17893288)
chr1 (27-112)||(18952402-18952487)
chr1 (27-112)||(46590553-46590638)
chr1 (27-111)||(17811247-17811331)
chr1 (27-107)||(49992682-49992762)
chr1 (7-61)||(31763803-31763857)
chr1 (27-108)||(1395315-1395396)
chr1 (27-108)||(42133943-42134024)
chr1 (27-83)||(12796593-12796649)
chr1 (32-107)||(11354324-11354399)
chr1 (8-62)||(42134094-42134148)
chr1 (8-61)||(12070572-12070625)
chr1 (27-108)||(14229171-14229252)
chr1 (8-61)||(14229323-14229376)
chr1 (27-108)||(14390008-14390089)
chr1 (9-54)||(24368445-24368490)
chr1 (51-108)||(32595103-32595160)
chr1 (8-61)||(32595133-32595186)
chr1 (51-112)||(42134121-42134182)
chr1 (27-112)||(24368580-24368661)
chr1 (12-60)||(29945250-29945298)
chr1 (27-113)||(29945382-29945466)
chr1 (12-61)||(11354473-11354522)
chr1 (51-108)||(14229349-14229406)
chr1 (8-61)||(14389873-14389926)
chr1 (51-108)||(17893261-17893318)
chr1 (8-61)||(18928807-18928860)
chr1 (27-108)||(31763937-31764018)
chr1 (51-104)||(45849297-45849350)
chr1 (41-113)||(32595261-32595333)
chr1 (51-110)||(9628587-9628646)
chr1 (51-114)||(12070598-12070661)
chr1 (10-49)||(15588548-15588587)
chr1 (57-108)||(33156991-33157042)
chr1 (7-46)||(35754597-35754636)
chr1 (32-83)||(35754737-35754788)
chr1 (27-82)||(47693691-47693746)
chr1 (27-70)||(51904730-51904773)
chr1 (8-50)||(6708346-6708388)
chr1 (8-61)||(1395193-1395246)
chr1 (8-61)||(9041013-9041066)
chr1 (8-61)||(9628561-9628614)
chr1 (27-104)||(15588635-15588711)
chr1 (8-61)||(33157021-33157073)
chr1 (8-61)||(45849271-45849324)
chr1 (16-61)||(47693828-47693873)
chr1 (51-108)||(47693854-47693911)
chr1 (24-60)||(12796474-12796510)
chr1 (13-61)||(18952548-18952596)
chr1 (51-98)||(14389853-14389900)
chr1 (49-108)||(32143755-32143814)
chr1 (46-108)||(10974632-10974694)
chr1 (55-113)||(12796417-12796475)
chr1 (51-108)||(9041039-9041096)
chr1 (63-108)||(23174401-23174446)
chr1 (26-62)||(10497900-10497936)
chr1 (27-75)||(12070453-12070501)
chr1 (26-62)||(20506669-20506705)
chr1 (26-62)||(21256200-21256236)
chr1 (26-62)||(23277327-23277363)
chr1 (26-62)||(23921298-23921334)
chr1 (26-62)||(31084048-31084084)
chr1 (29-61)||(35197618-35197650)
chr1 (26-62)||(37642765-37642801)
[»] chr6 (27 HSPs)
chr6 (27-108)||(25119105-25119186)
chr6 (27-108)||(21384788-21384869)
chr6 (27-108)||(22857487-22857568)
chr6 (27-112)||(14237773-14237858)
chr6 (31-112)||(10698572-10698653)
chr6 (27-112)||(20522664-20522749)
chr6 (8-61)||(10588915-10588968)
chr6 (27-112)||(19281278-19281363)
chr6 (8-61)||(22857639-22857692)
chr6 (8-62)||(7371059-7371113)
chr6 (15-61)||(11140418-11140464)
chr6 (43-108)||(129210-129274)
chr6 (8-61)||(20522810-20522863)
chr6 (51-108)||(22857665-22857722)
chr6 (8-60)||(21384952-21385004)
chr6 (14-62)||(30387161-30387209)
chr6 (51-113)||(21384977-21385039)
chr6 (51-108)||(7371086-7371143)
chr6 (51-108)||(10588941-10588998)
chr6 (11-60)||(25119433-25119482)
chr6 (51-108)||(25119458-25119515)
chr6 (12-44)||(14237958-14237990)
chr6 (8-60)||(19281447-19281499)
chr6 (31-112)||(25066204-25066282)
chr6 (8-54)||(19284400-19284446)
chr6 (16-50)||(25066367-25066401)
chr6 (51-108)||(19284370-19284427)
[»] scaffold0516 (1 HSPs)
scaffold0516 (27-108)||(1212-1293)
[»] scaffold0249 (1 HSPs)
scaffold0249 (27-108)||(23543-23624)
[»] scaffold0664 (1 HSPs)
scaffold0664 (31-112)||(3122-3203)
[»] scaffold0117 (1 HSPs)
scaffold0117 (7-108)||(17856-17956)
[»] scaffold0102 (4 HSPs)
scaffold0102 (27-108)||(15575-15656)
scaffold0102 (27-108)||(33781-33861)
scaffold0102 (51-108)||(33615-33672)
scaffold0102 (8-50)||(33645-33687)
[»] scaffold0129 (3 HSPs)
scaffold0129 (8-61)||(20082-20135)
scaffold0129 (27-73)||(19954-20000)
scaffold0129 (57-113)||(20114-20170)
[»] scaffold0019 (1 HSPs)
scaffold0019 (27-108)||(72666-72747)
[»] scaffold0291 (2 HSPs)
scaffold0291 (13-61)||(9672-9720)
scaffold0291 (27-83)||(9534-9590)
[»] scaffold0031 (3 HSPs)
scaffold0031 (31-83)||(80691-80743)
scaffold0031 (8-62)||(80828-80882)
scaffold0031 (49-108)||(80853-80912)
[»] scaffold0009 (2 HSPs)
scaffold0009 (8-72)||(51934-51998)
scaffold0009 (57-104)||(51908-51955)
[»] scaffold0004 (2 HSPs)
scaffold0004 (8-61)||(96028-96081)
scaffold0004 (51-105)||(96001-96055)
[»] scaffold0035 (1 HSPs)
scaffold0035 (27-83)||(75716-75772)
[»] scaffold0154 (1 HSPs)
scaffold0154 (27-61)||(37261-37295)
[»] scaffold0126 (1 HSPs)
scaffold0126 (8-50)||(37662-37704)


Alignment Details
Target: chr8 (Bit Score: 403; Significance: 0; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 92 - 534
Target Start/End: Complemental strand, 2541030 - 2540589
Alignment:
Q  92 ttatgcatcataaccgcgcccggtcagttgtttaagatgatacataccccaggtcgatcacatgatttgcattgccaccaagtcgaaccatctccatcga 191  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2541030 ttatgcaccataaccgcgcccggtcaattgtttaagatgatacataccccaggtcgatcacatgatttgcattgccaccaagtcgaaccatctccatcga 2540931  T
Q  192 gtactcctcgaccatgaccattaattgtgagtccttctacagattgcacggtaatccaatatgactgagctttccaatgtaccttagaaggtgcatctat 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2540930 gtactcctcgaccatgaccattaattgtgagtccttctacagattgcacggtaatccaatatgactgagctttccaatgtaccttagaaggtgcaactat 2540831  T
Q  292 tttcccttcaagctacaaaaagatagatggcaaaaatataaaacaaatataatttctttaatcattttaaaagccgcaattaaaacttatacatatgatt 391  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2540830 tttcccttcaagctacaaaaagatagatggcaaaaatacaaaacaaatataatttctttaatcattttaaaagccgcaattaaaacttataca-atgatt 2540732  T
Q  392 ataagtttattgtactaggttttaaaagtgaatgttagatatattaaatacctgaataagaatatgtttgttggtgcaaggaccgctaaaacttagtttc 491  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2540731 ataagtttattgtactaggtcttaaaagtgaatgttagatatattaaatacctgaataagaatatgtttgttggtgcaaggaccgttaaaacttagtttc 2540632  T
Q  492 gacaccataaatatttttcctgctggtataaccagtgttgaca 534  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  2540631 gacaccataaatgtttttcctactggtataaccagtgttgaca 2540589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 114 - 534
Target Start/End: Complemental strand, 2531685 - 2531253
Alignment:
Q  114 gtcagttgtttaagatgatacataccccaggtcgatcacatgatttgcattgccaccaagtcgaaccatctccatcgagtactcctcgaccatgaccatt 213  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |     
T  2531685 gtcaattgtataagatgatacataccccaggtcgagcacatgatttgcattgccaccaagtcgaaccatctccatcgagtactcctcgaccattaccttc 2531586  T
Q  214 aattgtgagtccttctacagattgcacggtaatccaatatgactgagctttccaatgtaccttagaaggtgcatctattttcccttcaagctacaaaaag 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||||||||||||    
T  2531585 aattgtgagtccttctacagattgcacggtaatccaatatgactgagctttccaacctacctttgaaggtgcaactattttcccttcaagctacaaaaag 2531486  T
Q  314 atagatggcaaaaatataaaacaaatataatttctttaatcattttaaaagccgcaatt------------aaaacttatacatatgattataagtttat 401  Q
    |||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||            |||||||||||||||||||||||||||||    
T  2531485 atagatggcaaaaatacaaaacaaatataatttctttaaatattttaaaagccgcaattaaaaatacaattaaaacttatacatatgattataagtttat 2531386  T
Q  402 tgtactaggttttaaaagtgaatgttagatatattaaatacctgaataagaatatgtttgttggtgcaaggaccgctaaaacttagtttcgacaccataa 501  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2531385 tgtactaggtcttaaaagtgaatgttagatatattaaatacctgaataagaatatttttgttggtgcaaggaccgctaaaacttagtttcgacaccataa 2531286  T
Q  502 atatttttcctgctggtataaccagtgttgaca 534  Q
    || |||||||| | ||||| |||||||||||||    
T  2531285 atgtttttcctacgggtatgaccagtgttgaca 2531253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 34343415 - 34343496
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||| ||||||||| | |||| ||||||| ||||||||||||||||||||||||| |||||||| |||||||||    
T  34343415 aatggttttggaatacaactcatagaaaccatttctgaatttatgcagggtgcataataatttccttatgcaccataaccgc 34343496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 35448579 - 35448655
Alignment:
Q  32 ttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  35448579 ttttggagtacaactcacataaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 35448655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 17656782 - 17656863
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||    |||||||| |||||||||    
T  17656782 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataagaaaaaccttatgcaccataaccgc 17656863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 23567607 - 23567687
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 107  Q
    |||| ||||||| ||||||||| | |||| ||||||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  23567607 aatgattttggaatacaactcatagaaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccg 23567687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 1672895 - 1672973
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 105  Q
    |||||||||| | ||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  1672895 aatggttttgaaatacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataac 1672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 166 - 326
Target Start/End: Complemental strand, 1829743 - 1829582
Alignment:
Q  166 ccaccaagtcgaaccatctccatcgagtactcctcgaccatgaccattaattgtgagtccttctacagattgcacggtaatccaatatgactgagctttc 265  Q
    ||||||||| ||||| |||||||| ||| ||||| |||||| ||||| |||||||||||| | |||| |||  |  |||| ||||||||| || ||||||    
T  1829743 ccaccaagtagaaccgtctccatcaagtcctccttgaccattaccatcaattgtgagtccatttacatattcaatagtaaaccaatatgattgtgctttc 1829644  T
Q  266 caatgtaccttagaaggtgcatctattttcccttcaagctacaa-aaagatagatggcaaaa 326  Q
     ||| | ||||||| |||||| |||| | ||||||||||| ||| | |||||||||| ||||    
T  1829643 gaatttgccttagagggtgcaactatctgcccttcaagctgcaatatagatagatggaaaaa 1829582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 166 - 326
Target Start/End: Complemental strand, 1864188 - 1864027
Alignment:
Q  166 ccaccaagtcgaaccatctccatcgagtactcctcgaccatgaccattaattgtgagtccttctacagattgcacggtaatccaatatgactgagctttc 265  Q
    ||||||||| ||||| |||||||| ||| ||||| |||||| ||||| |||||||||||| | |||| |||  |  |||| ||||||||| || ||||||    
T  1864188 ccaccaagtagaaccgtctccatcaagtcctccttgaccattaccatcaattgtgagtccatttacatattcaatagtaaaccaatatgattgtgctttc 1864089  T
Q  266 caatgtaccttagaaggtgcatctattttcccttcaagctacaa-aaagatagatggcaaaa 326  Q
     ||| | ||||||| |||||| |||| | ||||||||||| ||| | |||||||||| ||||    
T  1864088 gaatttgccttagagggtgcaactatctgcccttcaagctgcaatatagatagatggaaaaa 1864027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 10586076 - 10586023
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  10586076 caccctgcataaattcagaaatggttttggagtacaactcacagaaaccatttc 10586023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 15809804 - 15809885
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||| | |||| ||||||| ||||||| |||||||||||  |||| |||||||| |||||||||    
T  15809804 aatggttttggagtacaactcagagaaaccatttctgaatttatggagggtgcataaggatttccttatgcaccataaccgc 15809885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 1773170 - 1773114
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1773170 aatgattttggagtacaactcacaaaaaccatttctggatgtatgcagggtgcataa 1773114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 1773303 - 1773251
Alignment:
Q  9 accctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  1773303 accctgaataaattcagaaatggttttggagtacaactcacaaaaaccatttc 1773251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 472 - 534
Target Start/End: Complemental strand, 1827912 - 1827850
Alignment:
Q  472 gaccgctaaaacttagtttcgacaccataaatatttttcctgctggtataaccagtgttgaca 534  Q
    ||||||||||| ||| |||||||||||||||| |||||||||| |||||||| ||||||||||    
T  1827912 gaccgctaaaaattactttcgacaccataaatgtttttcctgccggtataactagtgttgaca 1827850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 472 - 534
Target Start/End: Complemental strand, 1862357 - 1862295
Alignment:
Q  472 gaccgctaaaacttagtttcgacaccataaatatttttcctgctggtataaccagtgttgaca 534  Q
    ||||||||||| ||| |||||||||||||||| |||||||||| |||||||| ||||||||||    
T  1862357 gaccgctaaaaattactttcgacaccataaatgtttttcctgccggtataactagtgttgaca 1862295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 27506786 - 27506708
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 105  Q
    |||||||||||| ||||||| ||| |||| |||| ||||||||||||||||||||||  |||| |||||||| ||||||    
T  27506786 aatggttttggaatacaacttacataaaccatttttggatttatgcagggtgcataaggatttccttatgcaccataac 27506708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 185914 - 185963
Alignment:
Q  12 ctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  185914 ctgcataaattcagaaatggttttggagtacaactcacagaaaccatttc 185963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 10585940 - 10585855
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||||||||||||||| | |||| |||||| |||||||||| |||||||||  |||| |||||||| | |||||| ||||    
T  10585940 aatggttttggagtacaactcatagaaaccatttctagatttatgcatggtgcataaggattttcttatgcaccgtaaccgagccc 10585855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 34343278 - 34343331
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  34343278 caccctacataaattcagaaatggttttgaagtacaactcacaaaaaccatttc 34343331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 17792772 - 17792716
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    ||||||||||| |||||||||| | |||| |||||||||||||||||||||||||||    
T  17792772 aatggttttggcgtacaactcaaagaaaccatttctggatttatgcagggtgcataa 17792716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 27506916 - 27506868
Alignment:
Q  13 tgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  27506916 tgcataaattcataaatggttttggagtacaactcacagaaactatttc 27506868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 28979362 - 28979291
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgca 98  Q
    |||| ||||| | |||||||||||||||  |||||||||||||||||||||||||||  |||| ||||||||    
T  28979362 aatgattttgaaatacaactcacaaaaatcatttctggatttatgcagggtgcataaggatttccttatgca 28979291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 10586049 - 10586111
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||||||||||||| ||||    
T  10586049 aaaaccatttctgaatttatgcagggtgcataaggatttccttatgcatcataaccgcacccg 10586111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 21120290 - 21120373
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||| |||||  |||||| |||| |||||||||||||| |||||||||||| ||||| |||| ||| |||| ||||||||    
T  21120290 aatggttttgaagtac--ctcacacaaaccatttctggatttatacagggtgcataagaattttcttacgcaccatagccgcgccc 21120373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 32644262 - 32644220
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  32644262 caccctgcataaatccagaaatggttttggagtacaactcaca 32644220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 186045 - 186126
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||| ||||| | |||||||||| ||||| |||||||||||||| ||||||||||||  |||| ||||| || |||||||||    
T  186045 aatgattttgaaatacaactcacgaaaaccatttctggatttatacagggtgcataaggatttccttatacaccataaccgc 186126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 5106750 - 5106697
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| ||||||||||||| || |||||||||||||||| |||||    
T  5106750 caccctgcataaatccagaaatggttttagaatacaactcacaaaaaccatttc 5106697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 15808941 - 15808884
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  15808941 aaaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataaccgc 15808884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 17656651 - 17656700
Alignment:
Q  12 ctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  17656651 ctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 17656700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 32644115 - 32644043
Alignment:
Q  38 agtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcc 111  Q
    ||||||||| ||| |||| |||||||||||||||||||||||||||  | || |||||||| ||||||||||||    
T  32644115 agtacaacttacataaaccatttctggatttatgcagggtgcataagga-ttccttatgcaccataaccgcgcc 32644043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 2541197 - 2541157
Alignment:
Q  15 cataaattcagaaatggttttggagtacaactcacaaaaac 55  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  2541197 cataaattcagaaatggttttggagtacaactcacagaaac 2541157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 23347702 - 23347766
Alignment:
Q  44 actcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||| |||| ||||||||||||||||||||| |||||  |||| |||||||| |||||||||    
T  23347702 actcacagaaaccatttctggatttatgcagggttcataaggattttcttatgcaccataaccgc 23347766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 17792887 - 17792942
Alignment:
Q  58 tttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||||||||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  17792887 tttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcacccg 17792942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 15808914 - 15808952
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaact 46  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  15808914 caccctgcataaatccagaaatggttttggagtacaact 15808952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 23504573 - 23504488
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    |||| |||||||||||||||||||||| | ||||||| |||||| ||||||||||||  ||||  |||||||  |||||| ||||||    
T  23504573 aatgattttggagtacaactcacaaaacc-atttctgaatttatacagggtgcataaggatttttttatgcactataaccacgcccg 23504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 23504708 - 23504666
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  23504708 caccctgcataaatctagaaatggttttggagtacaactcaca 23504666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 41642173 - 41642227
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcat 81  Q
    |||||||||||| |||||||||||  ||| |||||||||| ||||||||||||||    
T  41642173 aatggttttggaatacaactcacaggaacaatttctggatatatgcagggtgcat 41642227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 45409486 - 45409404
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa-taatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||| | |||| |||| | |||||||| |||||||||||  | ||| |||||||| |||||||||    
T  45409486 aatggttttggagtacaactcaaagaaaccattttttgatttatgtagggtgcataaggattttccttatgcaccataaccgc 45409404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 205007 - 204950
Alignment:
Q  32 ttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataattt 89  Q
    |||| |||||||||||||| |||  ||||||| ||||||||||||||||||| |||||    
T  205007 ttttagagtacaactcacagaaatcatttctgaatttatgcagggtgcataagaattt 204950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 319844 - 319787
Alignment:
Q  32 ttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataattt 89  Q
    |||| |||||||||||||| |||  ||||||| ||||||||||||||||||| |||||    
T  319844 ttttagagtacaactcacagaaatcatttctgaatttatgcagggtgcataagaattt 319787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 17656674 - 17656617
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||||||||||||||| ||||||||  |||| |||||||| |||||||||    
T  17656674 aaaaccatttctggatttatgcagagtgcataaggatttccttatgcaccataaccgc 17656617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 23567542 - 23567485
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||||||||||||||| ||||||||  |||| |||||||| |||||||||    
T  23567542 aaaaccatttctggatttatgcagagtgcataaggatttccttatgcaccataaccgc 23567485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 24473259 - 24473207
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||| |||||||||||| ||||||||||||||||||||||| ||| |||||    
T  24473259 caccctgtataaattcagaa-tggttttggagtacaactcacaacaaccatttc 24473207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 35116774 - 35116811
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactca 48  Q
    |||||||||||||||||||||||||| |||||||||||    
T  35116774 cctgcataaattcagaaatggttttgaagtacaactca 35116811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 35448284 - 35448228
Alignment:
Q  57 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||||||||||||| ||| |||| ||| |||| |||||||||||||||||| ||||    
T  35448284 atttctggatttatggaggttgcaaaatgatttccttatgcatcataaccgcacccg 35448228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 18757218 - 18757257
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  18757218 cctgcataaatttagagatggttttggagtacaactcaca 18757257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 6783468 - 6783514
Alignment:
Q  14 gcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||| | ||||| ||||||||||||||||||| |||||||||    
T  6783468 gcataaatttataaatgattttggagtacaactcacagaaactattt 6783514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 34343305 - 34343248
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||| ||||||| |||||||||||  |||| |||||||| |||||||||    
T  34343305 aaaaccatttctgaatttatgtagggtgcataaagatttccttatgcaccataaccgc 34343248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 2541075 - 2541031
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagg 75  Q
    |||||||||||||||||||| |||| ||||||  |||||||||||    
T  2541075 gttttggagtacaactcacagaaaccatttctaaatttatgcagg 2541031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 5106723 - 5106755
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataa 83  Q
    ||||| |||||||||||||||||||||||||||    
T  5106723 aaaaccatttctggatttatgcagggtgcataa 5106755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 18161453 - 18161521
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttat 95  Q
    |||||||||||| ||||||||||| |||| |||| | |||||||| | | |||||||  ||||||||||    
T  18161453 aatggttttggaatacaactcacagaaaccatttttagatttatggatgatgcataaggatttacttat 18161521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 28979470 - 28979438
Alignment:
Q  12 ctgcataaattcagaaatggttttggagtacaa 44  Q
    |||||||||| ||||||||||||||||||||||    
T  28979470 ctgcataaatccagaaatggttttggagtacaa 28979438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 34647568 - 34647532
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  34647568 aaatggttttggagtacaactcacagaaaccatttct 34647532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 40022785 - 40022749
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  40022785 aaatggttttggagtacaactcacagaaaccatttct 40022749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 4e-33; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 50416509 - 50416609
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 107  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||    
T  50416509 caccctgcataaatccagaaatggttttggagtacaattcacaaaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccg 50416608  T
Q  108 c 108  Q
    |    
T  50416609 c 50416609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 19012526 - 19012607
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  19012526 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 19012607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 36185806 - 36185721
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  36185806 aatggttttggagtacaactcacagaaaccatttctggatttatgcaggatgcataaggatttccttatgcaccataaccgcgccc 36185721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 8036880 - 8036799
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  8036880 aatggttttgaagtataactcacaaaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 8036799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 21175232 - 21175309
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 104  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||| || ||||| |||||    
T  21175232 aatggttttggagtacaactcacagaaactatttctggatttatgcagggtgcataaggatttcctcatgcaccataa 21175309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 47225812 - 47225897
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||||||||| |||||  |||| |||||||| |||||| ||||||    
T  47225812 aatggttttagagtacaactcacagaaaccatttctggatttatgcagggtacataaggatttccttatgcaccataactgcgccc 47225897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 12974092 - 12974007
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||| ||||| || |||||||||| |||| ||||||||||||| |||||||||||||  |||| |||||||| |||||||||||||    
T  12974092 aatgattttgcagaacaactcacagaaacaatttctggatttaggcagggtgcataaggatttccttatgcaccataaccgcgccc 12974007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 36185920 - 36185867
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  36185920 caccctgcataaatccagaaatggttttggagtacaactcacaaaaaccatttc 36185867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 49053301 - 49053220
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||| ||||||||||||| |||| ||||||| |||||||| |||||||||| ||||| |||||||| |||||| ||||||    
T  49053301 gttttgaagtacaactcacagaaaccatttctgaatttatgccgggtgcataagaatttccttatgcaccataactgcgccc 49053220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 38345444 - 38345500
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  38345444 aatggttttggagtacaactcacagaaattatttctggatttatgcaggatgcataa 38345500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 47924245 - 47924157
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcata---ataatttacttatgcatcataaccgcgccc 112  Q
    |||||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||   |  |||| |||||||| |||||||||||||    
T  47924245 aatggtattgaagtacaactcacagaaaccatttctggatttatgcagggtgcataaggaatatttccttatgcaccataaccgcgccc 47924157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 20127188 - 20127136
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  20127188 caccctgcataaattcagaaatagttttggagtataactcacaaaaaccattt 20127136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 27437912 - 27437833
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataacc 106  Q
    |||||||||||| ||||||| ||| |||| ||||||| ||||||||| ||||||||| ||||| ||||| || |||||||    
T  27437912 aatggttttggaatacaacttacagaaaccatttctgaatttatgcatggtgcataaaaatttccttatacaccataacc 27437833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 14743572 - 14743625
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||    
T  14743572 caccctgcataaatctagaaatggttttggagtacaactcacataaattatttc 14743625  T

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Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 20127161 - 20127218
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||||| |||||||||||||||||||  |||| ||||||||||||| ||||    
T  20127161 aaaactatttctgaatttatgcagggtgcataaggattttcttatgcatcatagccgc 20127218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 27446228 - 27446175
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||| |||||||||||||||||||||||||||||||| ||||| |||| |||||    
T  27446228 caccttgcataaattcagaaatggttttggagtacaattcacagaaaccatttc 27446175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 36185893 - 36185950
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  36185893 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 36185950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 49053414 - 49053471
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||||||||| ||||  |||| |||||||| |||||||||    
T  49053414 aaaactatttctggatttatgcagggtggataaagatttccttatgcaccataaccgc 49053471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 50416536 - 50416479
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  50416536 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 50416479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 16653528 - 16653578
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||| |||||    
T  16653528 cctgcataaatccagaaatggttttgaagtacaactcacagaaaccatttc 16653578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 19012423 - 19012473
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||| |||||    
T  19012423 cctgcataaatccagaaatggttttgaagtacaactcacagaaaccatttc 19012473  T

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Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 16653552 - 16653496
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||||||||||||| ||||||||| ||||| |||||||| |||||||||    
T  16653552 aaaaccatttctggatttatgca-ggtgcataagaatttccttatgcaccataaccgc 16653496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 19012447 - 19012391
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||||||||||||| ||||||||| ||||| |||||||| |||||||||    
T  19012447 aaaaccatttctggatttatgca-ggtgcataagaatttccttatgcaccataaccgc 19012391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 108
Target Start/End: Complemental strand, 38345332 - 38345279
Alignment:
Q  55 ctatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||||||||||  ||||  ||||||| |||||||||    
T  38345332 ctatttctggatttatgcagggtgcataaagatttctttatgcaccataaccgc 38345279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 47729220 - 47729301
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||| |||||||  ||||| |||| ||||||| ||||||| |||||||||||  |||| |||||||| || ||||||    
T  47729220 aatggtttttgagtacatttcacagaaaccatttctgaatttatgtagggtgcataaggatttccttatgcaccaaaaccgc 47729301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 49053441 - 49053388
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| ||||||| |||||| ||||||||||||| |||| |||||    
T  49053441 caccctgcataaatccagaaatagttttgaagtacaactcacagaaaccatttc 49053388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 8037004 - 8036964
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactca 48  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  8037004 caccctgcataaatccaaaaatggttttggagtacaactca 8036964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 51681190 - 51681146
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagg 75  Q
    |||||| | ||||||||||| ||||||||||||||||||||||||    
T  51681190 gttttgaaatacaactcacagaaactatttctggatttatgcagg 51681146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 12974203 - 12974153
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||| |||||||||| |||| |||||||||||| |||| |||||    
T  12974203 cctgcataaatccagaaatggtgttggtgtacaactcacagaaaccatttc 12974153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 8036977 - 8037034
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||| ||||||||||||||||||||||  |||| || ||||| |||||||||    
T  8036977 aaaaccatttttggatttatgcagggtgcataaggatttcctcatgcaccataaccgc 8037034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 19384425 - 19384380
Alignment:
Q  63 ggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||| ||||||||| ||||| |||||||| |||||||||    
T  19384425 ggatttatgcacggtgcataagaatttccttatgcaccataaccgc 19384380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 47924381 - 47924328
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||  ||||||| ||||| ||||||||||||| |||| |||||    
T  47924381 caccctgcataaatcaagaaatgattttgcagtacaactcacagaaaccatttc 47924328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 12974185 - 12974240
Alignment:
Q  57 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||||||||||||||| |||||||||  |||| |||||||| ||||||||| ||||    
T  12974185 atttctggatttatgca-ggtgcataaggatttccttatgcaccataaccgcacccg 12974240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 23755921 - 23755957
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  23755921 aaatggttttggagtacaactcacagaaaccatttct 23755957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 30794878 - 30794930
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||||||  |||||||||||||||||| | |||||| |||| ||||    
T  30794878 caccctgcataaatctagaaatggttttggagtatagctcacagaaaccattt 30794930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 34562798 - 34562762
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  34562798 aaatggttttggagtacaactcacagaaaccatttct 34562762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 35221624 - 35221580
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagg 75  Q
    |||||||||||||||||||| |||| ||||||  |||||||||||    
T  35221624 gttttggagtacaactcacagaaaccatttctaaatttatgcagg 35221580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 47924360 - 47924408
Alignment:
Q  57 atttctggatttatgcagggtgcataataatttacttatgcatcataac 105  Q
    |||||| ||||||||||||||||||||  |||| |||||||| ||||||    
T  47924360 atttcttgatttatgcagggtgcataaggatttccttatgcaccataac 47924408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 49450533 - 49450493
Alignment:
Q  68 tatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||||||||||||| |||||||| |||||||||    
T  49450533 tatgctgggtgcataataatttccttatgcaccataaccgc 49450493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 2e-26; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 44426763 - 44426848
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  44426763 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 44426848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 5728844 - 5728925
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  5728844 aatggttttggaatacaactcacagaaaccatttctggatttatgcagggtgcataagaattttcttatgcaccataaccgc 5728925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 46004421 - 46004335
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||  ||||  ||||||| |||||| |||||||    
T  46004421 aatggttttggagtacaactcacagaaaccatttctggatttatgcagagtgcataaggatttcgttatgcaccataactgcgcccg 46004335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 26945594 - 26945513
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||| |||||||| || |||| |||||||||| |||||||||||||||| ||||| |||||||| |||||||||    
T  26945594 aatggttttggaatacaactcgcagaaacaatttctggatatatgcagggtgcataagaatttccttatgcaccataaccgc 26945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 32604801 - 32604724
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 104  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||  |||| |||||||| |||||    
T  32604801 aatggttttggagtacaactcacagaaaccatttctgaatttatgcagggtgcataaagattttcttatgcaccataa 32604724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 34227756 - 34227671
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||| ||||||| ||||| |||||||||| ||||||||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  34227756 aatgtttttggaatacaattcacaaaaaccatttctggatttatgcaggttgcataaggatttccttatgcaccataaccgcgccc 34227671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 41065848 - 41065763
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||||||||||||||||| |||| ||||||  ||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  41065848 aatggttttggagtacaactcacagaaaccatttctaaatttatgcaggatgcataaagattttcttatgcaccataaccgcgccc 41065763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 5728709 - 5728762
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  5728709 caccctgcataaattcagaaatggttttggagtacaactcacagaaaccatttc 5728762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 7843599 - 7843518
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||  |||| ||||  || |||||||||    
T  7843599 aatggttttggagtacaactcacataaaccatttctggatttatgcagcgtgcataaggattttcttagacaccataaccgc 7843518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 31365434 - 31365495
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatt 88  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||||||||||||| ||||    
T  31365434 aatggttttggagtacaactcacagaaaccatttatggatttatgcagggtgcataagaatt 31365495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 38837620 - 38837543
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 104  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||  |||| | |||||| |||||    
T  38837620 aatggttttggagtacaactcacagaaaccatttctgaatttatgcagggtgcataaggatttccgtatgcaccataa 38837543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 6620762 - 6620846
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||||||||||||||||| |||| |||| ||||| || ||||||| |||||  |||| |||||||| |||||||||||||    
T  6620762 aatggttttggagtacaactcacagaaaccatttgtggatgtacgcagggt-cataaggatttccttatgcaccataaccgcgccc 6620846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 7843731 - 7843682
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  7843731 cctgcataaattcagaaatggttttggagtacaactcacagaaattattt 7843682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 26945729 - 26945676
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  26945729 caccctgcataaatccagaaatagttttggagtacaactcacagaaactatttc 26945676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 26945702 - 26945759
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  26945702 aaaactatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 26945759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 44426627 - 44426680
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  44426627 caccctgcataaatccagaaatggttttggagtacaactcacataaaccatttc 44426680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 45478482 - 45478563
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||| | |||||||||||||||| ||| ||||||||||||| | |||||||  |||| |||||||| |||||||||||||    
T  45478482 gttttgcaatacaactcacaaaaacaattactggatttatgcaagatgcataaggattttcttatgcaccataaccgcgccc 45478563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 34227891 - 34227839
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  34227891 caccctgcataaattcataaatggttttggagtacaactcacacaaaccattt 34227839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 44426654 - 44426592
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  44426654 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcacccg 44426592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 45478342 - 45478395
Alignment:
Q  7 acaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  45478342 acacgctgcataaattcagaaatggttttgaagtacaactcacagaaaccattt 45478395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 6846659 - 6846603
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||  ||||||||    
T  6846659 aatggttttggagtacaactcacagaaaccatttctgaatttatgcaaagtgcataa 6846603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 41065983 - 41065931
Alignment:
Q  9 accctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| |||||||||||| |||||||||||||| |||| |||||    
T  41065983 accctgcataaatttagaaatggttttcgagtacaactcacagaaaccatttc 41065931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 46004550 - 46004503
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaac 55  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||    
T  46004550 caccctgcataaattcagaaatggttttgaagtacaacacacagaaac 46004503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 31192568 - 31192518
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||| |||||||||||||||||||||| ||||| |||| |||||    
T  31192568 cctgcataaatccagaaatggttttggagtacaattcacagaaaccatttc 31192518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 43742281 - 43742331
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||| |||||    
T  43742281 cctgcataaatccagaaatgattttggagtacaactcacagaaaccatttc 43742331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 44140554 - 44140520
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||||||||||||||||||||||    
T  44140554 aatggttttggagtacaactcacaaaaactatttc 44140520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 34227864 - 34227921
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||| || ||||||||||||||||||| ||||| |||||||| |||||||||    
T  34227864 aaaaccatttatgaatttatgcagggtgcataagaatttccttatgcaccataaccgc 34227921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 46004523 - 46004580
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  46004523 aaaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 46004580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 5728654 - 5728694
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactca 48  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  5728654 caccttgcataaatccagaaatggttttggagtacaactca 5728694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 43742299 - 43742248
Alignment:
Q  57 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||||||||||| |||||||  |||| |||||||| |||||||||    
T  43742299 atttctggatttatgcaggatgcataaggatttccttatgcaccataaccgc 43742248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 32091312 - 32091346
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||||||||||| ||||||||||    
T  32091312 aatggttttggagtacaactcacagaaactatttc 32091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 48830380 - 48830414
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||||||||||| ||||||||||    
T  48830380 aatggttttggagtacaactcacagaaactatttc 48830414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 38837717 - 38837774
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||| |||||||||||| |||||||||  |||| |||||||| |||||||||    
T  38837717 aaaaccatttttggatttatgcaaggtgcataaggatttccttatgcaccataaccgc 38837774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 24360412 - 24360448
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  24360412 aaatggttttggagtacaactcacagaaaccatttct 24360448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 25779363 - 25779399
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  25779363 aaatggttttggagtacaactcacagaaaccatttct 25779399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 31365305 - 31365353
Alignment:
Q  13 tgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||| || ||||||||||||||||||| ||||| |||| |||||    
T  31365305 tgcataaatccataaatggttttggagtacaagtcacataaaccatttc 31365353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 48830246 - 48830282
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  48830246 aaatggttttggagtacaactcacagaaaccatttct 48830282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 25715742 - 25715637
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 107  Q
    |||||||||||||| |||||||||||||| | ||||||||||| |||| |||| ||||||||||||||||||||||  |||| |||||||| |||||||     
T  25715742 caccctgcataaatccagaaatggttttgaaatacaactcacagaaaccatttttggatttatgcagggtgcataaggatttccttatgcaccataacca 25715643  T
Q  108 cgcccg 113  Q
    ||||||    
T  25715642 cgcccg 25715637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 53865207 - 53865292
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  53865207 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcgccc 53865292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 31763009 - 31762922
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccgg 114  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||  |||| |||||||| |||||||||| ||||    
T  31763009 aatggttttggagtacaactcacaaaaaccatttctgaatttatgcaggatgcataaggatttccttatgcaccataaccgcgtccgg 31762922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 36309581 - 36309667
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    |||||||||| ||||||||||||| |||| |||||| ||||||||||||||||||||  |||| |||||||| ||||||||||||||    
T  36309581 aatggttttgaagtacaactcacagaaaccatttctagatttatgcagggtgcataaggattttcttatgcaccataaccgcgcccg 36309667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 6841897 - 6841820
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  6841897 gttttggagtacaactcacataaactatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 6841820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 8165842 - 8165761
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  8165842 aatggttttggaatacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 8165761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 6806507 - 6806579
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    |||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||||| |||||||||||    
T  6806507 cctgcataaattcagaaatggttttggagtacaactcaaagaaaccatttctagatttatgtagggtgcataa 6806579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 38010674 - 38010754
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 107  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||| | |||||| ||||||||    
T  38010674 aatggttttggagtacaactcacataaactatttctgaatttatgcagggtgcataaggatttccgtatgcaccataaccg 38010754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 2124424 - 2124338
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    |||||||||| ||||||||||||| |||| |||| || |||||||||||||||||||  |||| |||||||| ||||||||||||||    
T  2124424 aatggttttgaagtacaactcacataaaccatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgcgcccg 2124338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 12722818 - 12722736
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgc-agggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||  |||| |||||||| |||||||||    
T  12722818 aatggttttggagtacaactcacagaaaccatttctggatttatgcaagggtgcataaggatttccttatgcaccataaccgc 12722736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 33883370 - 33883293
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||||||||||  |||| |||||||| |||||||||    
T  33883370 gttttggagtacaactcacaaaaaccatttctgaatttatacagggtgcataaggatttccttatgcaccataaccgc 33883293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 37059930 - 37059877
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37059930 caccctgcataaattcagaaatggttttggagtacaactcacaaaaaccatttc 37059877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 31763123 - 31763070
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  31763123 caccctgcataaattcagaaatggttttggagtacaactcacagaaaccatttc 31763070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 37059791 - 37059706
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    ||||||||||||||| ||||| || |||  ||||||||||||||||| |||||||||  |||| |||||||| |||||||||||||    
T  37059791 aatggttttggagtataactcgcataaaacatttctggatttatgcaaggtgcataaggatttccttatgcaccataaccgcgccc 37059706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 27873014 - 27872962
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  27873014 caccctgcataaattcagaaatggttttgaagtacaactcacagaaactattt 27872962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 38563885 - 38563801
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcc 111  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||||| || ||||  |||| ||||||||  |||||||||||    
T  38563885 aatggttttggagtacaactcacacaaaccatttatggatttatgcaggatgtataaggatttccttatgcactataaccgcgcc 38563801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 54895547 - 54895626
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataacc 106  Q
    |||||||||| | ||||||||||| |||| |||| ||||||||||||||||||||||  |||| |||||||| |||||||    
T  54895547 aatggttttgaaatacaactcacagaaaccatttttggatttatgcagggtgcataaggatttccttatgcaccataacc 54895626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 8166090 - 8166040
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  8166090 cctgcataaattcagaaatggttttggagtacaactcacagaaaccatttc 8166040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 2124533 - 2124590
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  2124533 aaaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 2124590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 12722953 - 12722900
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  12722953 caccctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 12722900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 12722926 - 12722983
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  12722926 aaaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 12722983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 17109799 - 17109718
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||| ||||||||||| |||  ||||||||||||||||| ||| |||||  |||| |||||||| |||||||||    
T  17109799 aatggttttggaatacaactcacagaaatcatttctggatttatgcaaggtacataaggatttccttatgcaccataaccgc 17109718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 30779423 - 30779342
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||| ||||||||||||| | || |||| |||||||||||| |||||||||  |||| |||||||| |||||||||    
T  30779423 aatggttttgaagtacaactcacagagaccatttatggatttatgcaaggtgcataaggatttccttatgcaccataaccgc 30779342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 43375485 - 43375566
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||| |||||||||||| |||||  ||||||| |||||||||||||||||||  |||| | |||||| |||||||||    
T  43375485 aatggttttagagtacaactcaaaaaaatcatttctgaatttatgcagggtgcataaggatttccgtatgcaccataaccgc 43375566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 53526416 - 53526497
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||| ||||||||||||||||| | |||| ||||| | ||||||||||||| ||||| ||||| |||||||| |||||||||    
T  53526416 aatgattttggagtacaactcatagaaaccatttcggaatttatgcagggtacataagaatttccttatgcaccataaccgc 53526497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 54895433 - 54895486
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  54895433 caccctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 54895486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 9967761 - 9967705
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    |||| |||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  9967761 aatgattttggagtaaaactcacaaaaaccatttctgaatttatgcagggtgcataa 9967705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 41025274 - 41025226
Alignment:
Q  12 ctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  41025274 ctgcataaattcagaaatgattttggagtacaactcacagaaactattt 41025226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 43374477 - 43374529
Alignment:
Q  9 accctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  43374477 accctgcataaatccagaaatggttttggagtacaactcacataaaccatttc 43374529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 36924297 - 36924235
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    |||||||||| ||||||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  36924297 aaaactatttttggatttatgcagggtgcataaggatttccttatgcaccataaccgcacccg 36924235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 1492701 - 1492754
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||  ||||||||||||||||||||||||||| |||| |||||    
T  1492701 caccctgcataaatctagaaatggttttggagtacaactcacagaaaccatttc 1492754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 1492825 - 1492906
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||||||| ||||||||||||| |||| || ||||||||| |||||||||  |  | |||||||| |||||||||    
T  1492825 aatggttttggagtataactcacaaaaaccatttttgaatttatgcatggtgcataaggaaatccttatgcaccataaccgc 1492906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 2124560 - 2124507
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| ||||||||||||||||||| |||||||| |||| |||||    
T  2124560 caccctgcataaatccagaaatggttttggagtaaaactcacagaaaccatttc 2124507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 6842035 - 6841982
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| |||| |||||    
T  6842035 caccctgcataaattcaaaaatggttttggagtacaacttacagaaaccatttc 6841982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 21995699 - 21995752
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| || ||||||||||||||||||||||||| |||| |||||    
T  21995699 caccctgcataaatccataaatggttttggagtacaactcacagaaaccatttc 21995752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 25715715 - 25715772
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  25715715 aaaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataaccgc 25715772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 33883498 - 33883445
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| || ||||||||||||||||||||||||| |||| |||||    
T  33883498 caccctgcataaatccaaaaatggttttggagtacaactcacataaaccatttc 33883445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 54895460 - 54895403
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  54895460 aaaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataaccgc 54895403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 562836 - 562768
Alignment:
Q  46 tcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccgg 114  Q
    |||||||||| ||||||| ||||||||||||||||||   |||| |||||||| ||||||||| |||||    
T  562836 tcacaaaaaccatttctgaatttatgcagggtgcatagggatttccttatgcaccataaccgcacccgg 562768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 6768432 - 6768472
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactca 48  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  6768432 caccctgcataaatttagaaatggttttggagtacaactca 6768472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 9813025 - 9812969
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    |||| |||| |||||||||||||| ||||||||||||| |||||||| |||||||||    
T  9813025 aatgattttagagtacaactcacagaaactatttctgggtttatgcatggtgcataa 9812969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 10374072 - 10374124
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    |||||||||||||| |||||||| ||||||||||||||||||| |||| ||||    
T  10374072 caccctgcataaatccagaaatgattttggagtacaactcacagaaaccattt 10374124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 51076977 - 51076901
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcata 103  Q
    |||| ||||||||||||| |||| ||||| |||| | ||||||||||||||||||||  |||| |||||||| ||||    
T  51076977 aatgattttggagtacaattcactaaaaccatttatagatttatgcagggtgcataaggatttccttatgcaccata 51076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 8157190 - 8157108
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgc 110  Q
    |||| ||||||||||||||||||| |||  |||||||||||||| ||  |||||||  ||||| |||||||| |||||||||||    
T  8157190 aatgattttggagtacaactcacataaatcatttctggatttattca-agtgcataggaatttccttatgcaccataaccgcgc 8157108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 36924418 - 36924489
Alignment:
Q  37 gagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||| |||||||||| |||| |||||||||||||| | |||||  |||| |||||||| |||||||||    
T  36924418 gagtacaattcacaaaaaccatttatggatttatgcaggatacataaagatttccttatgcaccataaccgc 36924489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 9813160 - 9813118
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    ||||||||||||||||||||||| |||||||||| ||||||||    
T  9813160 caccctgcataaattcagaaatgattttggagtataactcaca 9813118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 16475032 - 16474982
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||| || ||||||||||||||||||||||||| |||| |||||    
T  16475032 cctgcataaatccataaatggttttggagtacaactcacagaaaccatttc 16474982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 83
Target Start/End: Original strand, 22007705 - 22007747
Alignment:
Q  41 acaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    |||| |||||||||||||||||| |||||||||||||||||||    
T  22007705 acaattcacaaaaactatttctgaatttatgcagggtgcataa 22007747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 33871293 - 33871227
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcag 74  Q
    ||||||||||| ||  | |||| |||||||||||||||| |||||||| |||||| |||||||||||    
T  33871293 caccctgcatagatctaaaaatagttttggagtacaacttacaaaaaccatttctagatttatgcag 33871227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 33871266 - 33871328
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    |||||||||| | ||| ||||||||||||||||  |||| |||||||||||||||||| ||||    
T  33871266 aaaactatttttagatctatgcagggtgcataaggatttccttatgcatcataaccgcacccg 33871328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 33883471 - 33883525
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 105  Q
    ||||| |||| ||||||||||||||||||||||| |||| |||||||| ||||||    
T  33883471 aaaaccatttttggatttatgcagggtgcataatgatttccttatgcaccataac 33883525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 36309445 - 36309487
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  36309445 caccctgcataaatccagaaatgattttggagtacaactcaca 36309487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 43374503 - 43374441
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||| ||||||||||||||||||||| |||||  |||| |||||||| ||||||||| ||||    
T  43374503 aaaaccatttctggatttatgcagggtacataaggatttccttatgcaccataaccgcacccg 43374441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 47567952 - 47567890
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||| ||||    
T  47567952 aaaactatttctggatttatgcaaggtgcataaggattttcttattcaccataaccgcacccg 47567890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 53865120 - 53865058
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||| |||||| ||||||||||| ||||||||  |||| |||||||||||||||||| ||||    
T  53865120 aaaaccatttctagatttatgcagagtgcataaagatttccttatgcatcataaccgcacccg 53865058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 1492728 - 1492671
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||| ||||||||||||||||||||  |||| |||||||| |||||||||    
T  1492728 aaaaccatttctagatttatgcagggtgcataaggatttccttatgcaccataaccgc 1492671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 8157304 - 8157251
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||  ||||||| ||||||||||||||||||| |||| |||||    
T  8157304 caccctgcataaatctagaaatgattttggagtacaactcacagaaaccatttc 8157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 21995726 - 21995669
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||| ||||||||||||||||||||||  |||| |||||||| |||||||||    
T  21995726 aaaaccatttatggatttatgcagggtgcataaggatttccttatgcaccataaccgc 21995669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 31763096 - 31763153
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  31763096 aaaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 31763153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 36924270 - 36924323
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| || |||| |||||||||||||||||||| |||| |||||    
T  36924270 caccctgcataaatccaaaaatagttttggagtacaactcacagaaaccatttc 36924323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 41025137 - 41025056
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    ||||| || ||||||| ||| |||| ||||||| |||||||||||||||||||  ||||  ||||| | |||||||||||||    
T  41025137 gttttagaatacaacttacagaaaccatttctgaatttatgcagggtgcataaggatttcattatgtaccataaccgcgccc 41025056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 47568049 - 47568102
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgca 80  Q
    |||| |||||||||| ||||||||||||| ||||||| ||||||||| ||||||    
T  47568049 aatgattttggagtataactcacaaaaaccatttctgaatttatgcatggtgca 47568102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 17109917 - 17109969
Alignment:
Q  62 tggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccgg 114  Q
    ||||||||||||||||||||||  |||| |||||||| ||||||||| |||||    
T  17109917 tggatttatgcagggtgcataaggatttccttatgcaccataaccgcacccgg 17109969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 38563973 - 38563929
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcacaaaaac 55  Q
    ||||||| |||||| ||||||||||||||||||||||||| ||||    
T  38563973 cctgcatgaattcataaatggttttggagtacaactcacagaaac 38563929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 53865097 - 53865145
Alignment:
Q  12 ctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||  |||||||||||||||||||||||||| ||||| ||||    
T  53865097 ctgcataaatctagaaatggttttggagtacaactcacgaaaaccattt 53865145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 55660457 - 55660405
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    |||| |||||||||||||||||| |||||||| ||| ||||||||||| ||||    
T  55660457 caccttgcataaattcagaaatgattttggagaacagctcacaaaaacaattt 55660405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 9813139 - 9813190
Alignment:
Q  57 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  9813139 atttctgaatttatgcagggtgcataaagatttccttatgcaccataaccgc 9813190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 33819734 - 33819687
Alignment:
Q  64 gatttatgcagggtgcataataatttacttatgcatcataaccgcgcc 111  Q
    ||||||||||||||||||||  |||| |||||||| ||||||||||||    
T  33819734 gatttatgcagggtgcataaggatttccttatgcaccataaccgcgcc 33819687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 36309466 - 36309419
Alignment:
Q  57 atttctggatttatgcagggtgcataataatttacttatgcatcataa 104  Q
    |||||||||||||||||||||||||||  |||| |||||||| |||||    
T  36309466 atttctggatttatgcagggtgcataaggatttccttatgcaccataa 36309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 53526285 - 53526320
Alignment:
Q  13 tgcataaattcagaaatggttttggagtacaactca 48  Q
    ||||||||| ||||||||||||||||||||||||||    
T  53526285 tgcataaatccagaaatggttttggagtacaactca 53526320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 38010498 - 38010532
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||||||||||||| |||||    
T  38010498 aatggttttggagtacaactcacaaaaaccatttc 38010532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 6768565 - 6768642
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||| ||||||||||| |||| |  ||| |||||||||||| |||||||  |||| ||||||||  ||||||||    
T  6768565 gttttggaatacaactcacagaaaccacatctagatttatgcaggatgcataaagatttccttatgcactataaccgc 6768642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 16475008 - 16475065
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||| |||||||||||||| |||||||  |||| |||||||| |||||||||    
T  16475008 aaaaccatttatggatttatgcaggatgcataaagatttccttatgcaccataaccgc 16475065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 17109933 - 17109881
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| || ||||| ||||||||||||||||||| |||| |||||    
T  17109933 caccctgcataaatcca-aaatgattttggagtacaactcacagaaaccatttc 17109881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 47567925 - 47567978
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||| ||||||||| ||||||| |||||||||||||| ||||| |||| |||||    
T  47567925 caccttgcataaatccagaaatagttttggagtacaattcacagaaaccatttc 47567978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 1729018 - 1728982
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  1729018 aaatggttttggagtacaactcacataaaccatttct 1728982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 8157283 - 8157331
Alignment:
Q  57 atttctggatttatgcagggtgcataataatttacttatgcatcataac 105  Q
    |||||| ||||||||||||||||||||  |||| |||||||| ||||||    
T  8157283 atttctagatttatgcagggtgcataaggatttccttatgcaccataac 8157331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 29826101 - 29826065
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  29826101 aaatggttttggagtacaactcacagaaaccatttct 29826065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 38010540 - 38010576
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  38010540 aaatggttttggagtacaactcacagaaaccatttct 38010576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 42788663 - 42788715
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcata 103  Q
    |||||||||||| |||||||||||| |||||||  |||| |||||||| ||||    
T  42788663 aaaactatttcttgatttatgcaggatgcataaggatttccttatgcaccata 42788715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 49137524 - 49137488
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  49137524 aaatggttttggagtacaactcacataaaccatttct 49137488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 50644349 - 50644385
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  50644349 aaatggttttggagtacaactcacagaaaccatttct 50644385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 35662197 - 35662284
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccgg 114  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||  |||| |||||||| |||||||||||||||    
T  35662197 aatggttttggagtacaactcacagaaaccatttatggatttatgcagggtgcataagtatttccttatgcaccataaccgcgcccgg 35662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 42746803 - 42746890
Alignment:
Q  23 cagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgc 110  Q
    |||| ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||  |||| ||||| ||||||||||||||    
T  42746803 cagacatggttttggagtacaactcacataaaccatttctgaatttatgcagggtgcataaagatttccttatacatcataaccgcgc 42746890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 5630235 - 5630312
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 104  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||| || ||||| |||||    
T  5630235 aatggttttggagtacaactcacagaaactatttctggatttatgcagggtgcataaggatttcctcatgcaccataa 5630312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 11660873 - 11660792
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||  |||| |||||||| |||||||||    
T  11660873 aatggttttggagtacaactcacaaaaaccatttctgaatttatgtagggtgcataaggatttccttatgcaccataaccgc 11660792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 22695504 - 22695585
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||  |||| |||||||| |||||||||    
T  22695504 aatggttttggaatacaactcacagaaactatttctggatttatgcaaggtgcataaggatttccttatgcaccataaccgc 22695585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 22830752 - 22830837
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||  |||| |||||||| |||||| ||||||    
T  22830752 aatggttttggagtacaactcacagaaaccatttctggatttatgcagtgtgcataaggatttccttatgcaccataactgcgccc 22830837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 16552327 - 16552241
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||   |||| |||||||| ||||||||| ||||    
T  16552327 aatggttttggagtacaactcacagaaaccatttctgaatttatgcagggtgcatacggatttccttatgcaccataaccgcacccg 16552241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 39086546 - 39086599
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39086546 caccctgcataaattcagaaatggttttggagtacaactcacaaaaaccatttc 39086599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 22671962 - 22672041
Alignment:
Q  28 atggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 107  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||| |||||||  |||| |||||||| ||||||||    
T  22671962 atggttttggagtacaactcataaaaatcatttctggatttatgcaggatgcataaggatttccttatgcaccataaccg 22672041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 39166231 - 39166160
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgca 98  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||||||||||||||| ||||| ||||||||    
T  39166231 aatggttttggagtacagctcacagaaatcatttctggatttatgcagggtgcataagaatttccttatgca 39166160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 15059597 - 15059679
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa-taatttacttatgcatcataaccgc 108  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||   |||| |||||||| |||||||||    
T  15059597 aatggttttggaatacaactcacagaaaccatttctggatttatgcagggtgcataagggatttccttatgcaccataaccgc 15059679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 20134279 - 20134198
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||| ||||||| ||||||||||| |||| ||||||||||||||||||| |||||||  |||| |||||||| |||||||||    
T  20134279 aatgattttggaatacaactcacagaaaccatttctggatttatgcaggctgcataaggatttccttatgcaccataaccgc 20134198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 7286918 - 7287001
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcc 111  Q
    |||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||  | || |||||||| ||||||||||||    
T  7286918 aatggttttgaagtacaactcacagaaaccatttccggatttatgcagggtgcataagga-ttccttatgcaccataaccgcgcc 7287001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 23155554 - 23155606
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  23155554 caccctgcataaattcagaaatggttttggagtacaactcacagaaaccattt 23155606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 703810 - 703732
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 105  Q
    |||| |||||||||||||||||||||||| ||||||  ||||||||||| |||||||  |||| |||||||| ||||||    
T  703810 aatgattttggagtacaactcacaaaaaccatttctaaatttatgcaggatgcataaggatttccttatgcaccataac 703732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 42746551 - 42746601
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  42746551 cctgcataaatccagaaatggttttggagtacaactcacataaactatttc 42746601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 15559078 - 15559183
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 107  Q
    |||| |||||||||||||||||| ||||| | |||||| |||| |||  |||||| |||||||||||| ||||||   |||| |||||||| |||||| |    
T  15559078 caccatgcataaattcagaaatgattttgaaatacaacccacataaatcatttctagatttatgcaggatgcatacggatttccttatgcaccataacag 15559177  T
Q  108 cgcccg 113  Q
    ||||||    
T  15559178 cgcccg 15559183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 36864232 - 36864317
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||| ||||||||||||||||||| |||  ||||||| |||||||||| ||||||||  |||| ||||| || |||||||||||||    
T  36864232 aatgattttggagtacaactcacataaatcatttctgaatttatgcagagtgcataaggatttccttatacaccataaccgcgccc 36864317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 15059467 - 15059515
Alignment:
Q  13 tgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  15059467 tgcataaatccagaaatggttttggagtacaactcacagaaactatttc 15059515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 33857434 - 33857378
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    |||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  33857434 aatggttttggagtacaactcacataaaccatttttggatttatgaagggtgcataa 33857378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 39861659 - 39861579
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 107  Q
    |||||||||| | ||||||||||  |||| |||||||||||||||||||||||||||  |||| |||||||  ||||||||    
T  39861659 aatggttttgaaatacaactcaccgaaaccatttctggatttatgcagggtgcataaggatttccttatgccccataaccg 39861579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 23155807 - 23155885
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 105  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| |||||||||  ||||  ||||||| ||||||    
T  23155807 aatggttttggagtacaactcatagaaacaatttttggatttatgcaaggtgcataaggatttcattatgcaccataac 23155885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 39861795 - 39861753
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  39861795 caccctgcataaatccagaaatggttttggagtacaactcaca 39861753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 39861768 - 39861830
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  39861768 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcacccg 39861830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 7286782 - 7286835
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||||||| |||||||||||||| |||| |||| |||||    
T  7286782 caccctgcataaattcagaaatgattttggagtacaacacacagaaaccatttc 7286835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 11660997 - 11660944
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| |||||||||||||||| ||||||||||| |||| |||||    
T  11660997 caccctgcataaatccagaaatggttttggaatacaactcacagaaaccatttc 11660944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 39166355 - 39166302
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||| |||||||||||||||||| |||||||| |||| |||||    
T  39166355 caccctgcataaatttagaaatggttttggagtataactcacagaaaccatttc 39166302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 11660970 - 11661026
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 107  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||    
T  11660970 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccg 11661026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 3340619 - 3340657
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaact 46  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  3340619 caccctgcataaatttagaaatggttttggagtacaact 3340657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 20134410 - 20134372
Alignment:
Q  12 ctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  20134410 ctgcataaatccagaaatggttttggagtacaactcaca 20134372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 20134387 - 20134449
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||| |||||||||||||||||| ||||||||  |||| |||||||| ||||||||| ||||    
T  20134387 aaaaccatttctggatttatgcagagtgcataaggatttccttatgcaccataaccgcacccg 20134449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 35662096 - 35662138
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||| ||||||| ||||||||||||||||||||||||||||    
T  35662096 caccctacataaatccagaaatggttttggagtacaactcaca 35662138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 39086670 - 39086748
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 105  Q
    ||||||||||||||||| |||||| |||| |||||| ||||||| ||  ||||||||  |||| |||||||| ||||||    
T  39086670 aatggttttggagtacagctcacagaaaccatttctagatttatacatagtgcataaggatttccttatgcaccataac 39086748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 3340743 - 3340824
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||||||| |||||||| |||| |||| ||||||||| ||  ||||||||  |||| |||| ||| |||||||||    
T  3340743 aatggttttggagtataactcacagaaaccatttatggatttatacatagtgcataaggatttccttacgcaccataaccgc 3340824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 11376592 - 11376543
Alignment:
Q  12 ctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||| |||||||| |||||||||| |||| |||||    
T  11376592 ctgcataaattcagaaatgattttggagaacaactcacagaaaccatttc 11376543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 35662123 - 35662066
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||||||||||| |||||||||||  |||| |||||||| |||||||||    
T  35662123 aaaaccatttctggatttatgtagggtgcataaggatttccttatgcaccataaccgc 35662066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 36864123 - 36864066
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||| ||||||||||| |||||||| ||||| |||||||| |||||||||    
T  36864123 aaaaccatttctagatttatgcagtgtgcataagaatttccttatgcaccataaccgc 36864066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 36864100 - 36864149
Alignment:
Q  12 ctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||  ||||||||||||||| ||||||||||| ||||||||||    
T  36864100 ctgcataaatctagaaatggttttggaatacaactcacagaaactatttc 36864149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 39086573 - 39086516
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  39086573 aaaaccatttctgaatttatgcagggtgcataaggattttcttatgcaccataaccgc 39086516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 5411750 - 5411806
Alignment:
Q  57 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||||| ||||||| ||||||||||| ||||| |||||||| ||||||||| ||||    
T  5411750 atttctgaatttatgaagggtgcataagaatttccttatgcaccataaccgcacccg 5411806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 20696204 - 20696152
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    |||||| ||||||||||||| |||| ||||||||||||||| ||||| |||||    
T  20696204 gttttgaagtacaactcacagaaaccatttctggatttatgtagggtacataa 20696152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 23155581 - 23155526
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataacc 106  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||| |||||||    
T  23155581 aaaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataacc 23155526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 33857552 - 33857505
Alignment:
Q  14 gcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||| ||||||||||||| ||||| |||| |||||    
T  33857552 gcataaattcagaaatgattttggagtacaattcacagaaaccatttc 33857505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 39166328 - 39166390
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||| ||||||  |||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  39166328 aaaaccatttctaaatttatgcagggtgcataaggattttcttatgcaccataaccgcacccg 39166390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 42746683 - 42746721
Alignment:
Q  23 cagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  42746683 cagacatggttttggagtacaactcacataaactatttc 42746721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 3340646 - 3340589
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||  |||||||||||||||||||  |||| |||||||| |||||||||    
T  3340646 aaaaccatttctaaatttatgcagggtgcataaggatttccttatgcaccataaccgc 3340589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 55
Target Start/End: Original strand, 33868793 - 33868822
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaac 55  Q
    ||||||||||||||||||||||||||||||    
T  33868793 aaatggttttggagtacaactcacaaaaac 33868822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 42746575 - 42746518
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||||||||||||||| | |||||  |||| |||||||| |||||||||    
T  42746575 aaaaccatttctggatttatgcaggattcataaggatttccttatgcaccataaccgc 42746518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 5411771 - 5411719
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    |||||| |||||||||||||||| |||||| ||| |||||||| ||| |||||    
T  5411771 cacccttcataaattcagaaatgattttggggtataactcacagaaattattt 5411719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 8949471 - 8949503
Alignment:
Q  29 tggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||||||||||| |||||    
T  8949471 tggttttggagtacaactcacaaaaaccatttc 8949503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 8949511 - 8949547
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  8949511 aaatggttttggagtacaactcacagaaaccatttct 8949547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 11376461 - 11376405
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    |||| ||||| ||||||||||||| |||| ||||||  ||||||||||| |||||||    
T  11376461 aatgattttgaagtacaactcacagaaaccatttctaaatttatgcaggatgcataa 11376405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 16668237 - 16668201
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  16668237 aaatggttttggagtacaactcacagaaaccatttct 16668201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 16668277 - 16668245
Alignment:
Q  29 tggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||||||||||| |||||    
T  16668277 tggttttggagtacaactcacaaaaaccatttc 16668245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 30783586 - 30783630
Alignment:
Q  62 tggatttatgcagggtgcataataatttacttatgcatcataacc 106  Q
    |||||||||||| |||||||||  |||| ||||||||||||||||    
T  30783586 tggatttatgcacggtgcataaggatttccttatgcatcataacc 30783630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 16111668 - 16111755
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactattt-ctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||| |||||||| ||||||||||||||    
T  16111668 aatggttttggagtacaactcacaaaaaccattttctggatttatgcagggtgcataaagatttccttatgcaccataaccgcgcccg 16111755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 30777375 - 30777289
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  ||||  ||||||| ||||||||||||||    
T  30777375 aatggttttggagtacaactcacataaaccatttctggatttatgcagggtgcataaggatttttttatgcaccataaccgcgcccg 30777289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 12449134 - 12449053
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||  |||| |||||||| |||||||||    
T  12449134 aatggttttggagtacaactcacaaaaaccatttctgaatttatgcagtgtgcataaggatttccttatgcaccataaccgc 12449053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 42364657 - 42364742
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||  |||| ||| |||| |||||||||||||    
T  42364657 aatggttttggagtacaactaacagaaaccatttctggatttatgcagggtgcataaggatttccttttgcaccataaccgcgccc 42364742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 20661476 - 20661395
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||| |||||||||||||||| |||| | ||||||||||||||||||||  |||| |||||||| |||||||||    
T  20661476 aatggttttggaatacaactcacaaaaaccatttatagatttatgcagggtgcataaggatttccttatgcaccataaccgc 20661395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 31711663 - 31711742
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 107  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |  |||| |||||||| ||||||||    
T  31711663 aatggttttggagtacaactcacaaaaaccatttctgaatttatgcagggtgcatgaggattt-cttatgcaccataaccg 31711742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 22588398 - 22588317
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||  |  | |||||||| |||||||||    
T  22588398 aatgattttggagtacaactcacaaaaaccatttctgaatttatgcagggtgcataaggaaatccttatgcaccataaccgc 22588317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 37867323 - 37867404
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    ||||||||||| |||||||| |||| ||||||| |||||||||||||||||||  |||| |||||||| | |||||||||||    
T  37867323 gttttggagtataactcacagaaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccgtaaccgcgccc 37867404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 15253035 - 15252983
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  15253035 caccctgcataaattcagaaatggttttggagtacaacttacaaaaaccattt 15252983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 42364521 - 42364573
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  42364521 caccctgcataaattcagaaatggttttggagtacaactcacagaaaccattt 42364573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 34726684 - 34726605
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataacc 106  Q
    |||||||||| ||||||||||| | |||| |||| ||||||||||||||||||||||  |||| |||||||| |||||||    
T  34726684 aatggttttgaagtacaactcatagaaaccatttatggatttatgcagggtgcataaggatttccttatgcaccataacc 34726605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 19246691 - 19246744
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  19246691 caccctgcataaattcagaaattgttttggagtacaactcacagaaaccatttc 19246744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 22596384 - 22596303
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||| ||||||| ||||| |||| | |||||||||||||||||||||||||  |||| ||||| || |||||||||    
T  22596384 aatggttttgtagtacaattcacagaaaccaattctggatttatgcagggtgcataaggatttccttatacaccataaccgc 22596303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 25575403 - 25575322
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||| || || ||||||||||||| ||||||| ||||||||||| |||||||  |||| |||||||| |||||||||    
T  25575403 aatggttttagaatataactcacaaaaaccatttctgaatttatgcaggatgcataaggatttccttatgcaccataaccgc 25575322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 37867183 - 37867236
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  37867183 caccctgcataaattcagaaatgattttggagtacaactcacagaaaccatttc 37867236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 44915371 - 44915290
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||||| |||  ||||||  ||||||||||| |||||||  |||| |||||||| |||||||||    
T  44915371 aatggttttggagtacaactcacataaatcatttctaaatttatgcaggctgcataaagatttccttatgcaccataaccgc 44915290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 15252908 - 15252848
Alignment:
Q  38 agtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgca 98  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||  |||| ||||||||    
T  15252908 agtacaactcacataaaccatttctggatttatgcagggtgcataaggatttccttatgca 15252848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 51 - 107
Target Start/End: Original strand, 20661583 - 20661639
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 107  Q
    ||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  20661583 aaaaccatttctggatttatgcagggtgcataatgatttccttatgcaccataaccg 20661639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 31711540 - 31711592
Alignment:
Q  9 accctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  31711540 accctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 31711592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 34726790 - 34726841
Alignment:
Q  57 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  34726790 atttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 34726841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 20661610 - 20661568
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  20661610 caccctgcataaatccagaaatggttttggagtacaactcaca 20661568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 24183612 - 24183559
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||||| |||| ||||||||||||||||||| |||| |||||    
T  24183612 caccctgcataaattcaggaatgattttggagtacaactcacataaaccatttc 24183559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 31783849 - 31783792
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  31783849 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 31783792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 31783822 - 31783875
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| |||||||||||||| ||||||||||||| |||| |||||    
T  31783822 caccctgcataaatccagaaatggttttgaagtacaactcacagaaaccatttc 31783875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 34726811 - 34726758
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| |||||||| ||||||||||||||||||| |||| |||||    
T  34726811 caccctgcataaatccagaaatgattttggagtacaactcacagaaaccatttc 34726758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 44915479 - 44915536
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  44915479 aaaacaatttctggatttatgcagggtgcataagcatttccttatgcaccataaccgc 44915536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 3147300 - 3147248
Alignment:
Q  9 accctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||| ||||||||||||||| |||||||||||||||||||| |||| |||||    
T  3147300 accctccataaattcagaaatagttttggagtacaactcacataaaccatttc 3147248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 22596518 - 22596466
Alignment:
Q  9 accctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| ||||||||||    
T  22596518 accctgcataaatccagaaattgttttggtgtacaactcacagaaactatttc 22596466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 35126706 - 35126666
Alignment:
Q  10 ccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  35126706 ccctgcataaatccagaaatggttttggagtacaactcaca 35126666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 1095377 - 1095330
Alignment:
Q  14 gcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||    
T  1095377 gcataagttcagaaatggttttggagtacaactcacagaaaccatttc 1095330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 42364548 - 42364485
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccgg 114  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||| ||||||||| |||||    
T  42364548 aaaaccatttctgaatttatgcagggtgcataaggattttcttatgcaccataaccgcacccgg 42364485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 20194015 - 20194077
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||| |||||| |||||||| ||||||||||| ||||| |||||||| ||||||||| ||||    
T  20194015 aaaaccatttctagatttatgtagggtgcataagaatttccttatgcaccataaccgcacccg 20194077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 22588506 - 22588560
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 105  Q
    ||||||||||||||||||||| |||||||||||  |||| |||| ||||||||||    
T  22588506 aaaactatttctggatttatgtagggtgcataaggatttccttacgcatcataac 22588560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 31783946 - 31784030
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcag---ggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||  ||||||||||||| |||| ||||||| ||||||||||   |||||||||  |||| |||||||| |||||||||    
T  31783946 aatggttttttagtacaactcacagaaaccatttctgaatttatgcagggtggtgcataaggatttccttatgcaccataaccgc 31784030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 22596492 - 22596549
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||||||||||||||||| |||||  |||| |||||||| |||||||||    
T  22596492 aaaacaatttctggatttatgcagggtacataaggatttccttatgcaccataaccgc 22596549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 31711566 - 31711509
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||||||||||||||||| |||||  |||| |||||||| |||||||||    
T  31711566 aaaaccatttctggatttatgcagggtacataaggatttccttatgcaccataaccgc 31711509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 1095259 - 1095203
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    |||||||||| | |||||||||||||||  ||||||  |||||||||||||||||||    
T  1095259 aatggttttgaaatacaactcacaaaaatcatttctaaatttatgcagggtgcataa 1095203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 12449258 - 12449218
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactca 48  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  12449258 caccttgcataaatttagaaatggttttggagtacaactca 12449218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 16111542 - 16111594
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||||||| | |||| |||||||||||||||||||| |||| ||||    
T  16111542 caccctgcataaatttaaaaatagttttggagtacaactcacagaaaccattt 16111594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 24183477 - 24183433
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatg 71  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||    
T  24183477 aatggttttggaatacaactcacataaaccatttctggatttatg 24183433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 44915506 - 44915454
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    |||||||||||||| ||||||| |||||||||||||| ||||| |||| ||||    
T  44915506 caccctgcataaatccagaaattgttttggagtacaattcacagaaaccattt 44915454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 15150269 - 15150336
Alignment:
Q  41 acaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||| ||||  |||||| ||||||||||| |||||||  |||| |||||||| |||||||||    
T  15150269 acaactcacagaaaccttttctgaatttatgcaggatgcataaggattttcttatgcaccataaccgc 15150336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 30777535 - 30777488
Alignment:
Q  14 gcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||| || ||||||||||||||||||||||||| |||| |||||    
T  30777535 gcataaatccataaatggttttggagtacaactcacagaaaccatttc 30777488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 19246718 - 19246664
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 105  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||| ||||||    
T  19246718 aaaacaatttctgaatttatgcagggtgcataaggatttccttatgcaccataac 19246664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 20194042 - 20194000
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||| |||||||  |||||||||||||||||||||||||||    
T  20194042 caccctacataaatctagaaatggttttggagtacaactcaca 20194000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 22588533 - 22588491
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||    
T  22588533 caccctacataaatccagaaatagttttggagtacaactcaca 22588491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 61
Target Start/End: Complemental strand, 36636206 - 36636172
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||||||||||||| |||||    
T  36636206 aatggttttggagtacaactcacaaaaaccatttc 36636172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 16111569 - 16111516
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 104  Q
    |||||||||| |  ||||||||||||||||||| ||||| |||||||| |||||    
T  16111569 aaaactatttttaaatttatgcagggtgcataagaattttcttatgcaccataa 16111516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 20570929 - 20570982
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgca 80  Q
    |||||||||| ||||||||| ||| |||| |||| | |||||||||||||||||    
T  20570929 aatggttttgaagtacaacttacagaaaccatttttagatttatgcagggtgca 20570982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 43823329 - 43823365
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  43823329 aaatggttttggagtacaactcacataaaccatttct 43823365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 9e-25; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 17893152 - 17893066
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| ||||||| ||||||    
T  17893152 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccacgcccg 17893066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 45849188 - 45849102
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| ||||| ||||||||    
T  45849188 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataatcgcgcccg 45849102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 33157144 - 33157225
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||| || |||||||||    
T  33157144 aatggttttagagtacaactcacagaaaccatttctggatttatgcagggtgcataatgatttccttatccaccataaccgc 33157225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 18928921 - 18929004
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    ||||||||||||||| ||||||||||  | |||||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  18928921 aatggttttggagtataactcacaaa--ccatttctggatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 18929004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 17893288 - 17893235
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17893288 caccctgcataaattcagaaatagttttggagtacaactcacaaaaactatttc 17893235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 18952487 - 18952402
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||  ||||  |||||||  ||||||||||||    
T  18952487 aatggttttggagtacaactcacataaaccatttctggatttatgtagggtgcataaggatttctttatgcacgataaccgcgccc 18952402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 46590638 - 46590553
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||| |||| ||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||| |||||||| ||||| |||||||    
T  46590638 aatgattttagagtacaactcacaaaaaccatttctggattaatgcaggatgcataagaattttcttatgcaccataatcgcgccc 46590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 17811247 - 17811331
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcc 111  Q
    |||||||||||||||||||||| | |||| ||||||| |||||| ||||||||||||  |||| |||||||| ||||||||||||    
T  17811247 aatggttttggagtacaactcatagaaaccatttctgaatttatacagggtgcataaggatttccttatgcaccataaccgcgcc 17811331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 49992682 - 49992762
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 107  Q
    |||| ||||||| ||||||||||| |||| ||||||| ||||||||||||||||||| ||||| | |||||||||||||||    
T  49992682 aatgattttggaatacaactcacagaaaccatttctgaatttatgcagggtgcataagaattttcatatgcatcataaccg 49992762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 31763803 - 31763857
Alignment:
Q  7 acaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  31763803 acaccctgcataaattcaaaaatggttttggagtacaactcacaaaaaccatttc 31763857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 1395315 - 1395396
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||| |||| ||||||||||||||||||| ||||||| ||||||||| |||||||||  |||| |||||||| |||||||||    
T  1395315 aatgatttttgagtacaactcacaaaaaccatttctgaatttatgcatggtgcataaggatttccttatgcaccataaccgc 1395396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 42134024 - 42133943
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||| ||||| ||||||||||||| ||||||||||| |||||||||||| |||||||  |||| |||||||| |||||||||    
T  42134024 aatgattttgaagtacaactcacagaaactatttctagatttatgcaggatgcataaggatttccttatgcaccataaccgc 42133943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 12796593 - 12796649
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  12796593 aatggttttagagtacaactcacagaaaccatttctggatttatgcagggtgcataa 12796649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 11354399 - 11354324
Alignment:
Q  32 ttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 107  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||| ||||| |||| |||||||| | ||||||    
T  11354399 ttttggagtacaactcacaaaaaccatttctgaatttatggagggtgtataatgatttccttatgcaccgtaaccg 11354324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 42134148 - 42134094
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttct 62  Q
    |||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  42134148 caccctgcataaatccagaaatggttttagagtacaactcacataaactatttct 42134094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 12070625 - 12070572
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| |||||    
T  12070625 caccctgcataaattccgaaatggttttggagtacaactcacagaaaccatttc 12070572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 14229252 - 14229171
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||| ||||| ||||| |||||||||||| |||| || |||||||||||||||||||  |||| |||||||| |||||||||    
T  14229252 aatgattttgtagtacgactcacaaaaaccatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 14229171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 14229376 - 14229323
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  14229376 caccctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 14229323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 14390008 - 14390089
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||||| |||| ||||||  |||||||||||||||||||  |  | |||||||| |||||||||    
T  14390008 aatggttttggagtacaactcacagaaaccatttctaaatttatgcagggtgcataaggaaatccttatgcaccataaccgc 14390089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 24368445 - 24368490
Alignment:
Q  9 accctgcataaattcagaaatggttttggagtacaactcacaaaaa 54  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  24368445 accctgcataaattcagaaatggttttgaagtacaactcacaaaaa 24368490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 32595160 - 32595103
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  32595160 aaaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 32595103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 32595133 - 32595186
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  32595133 caccctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 32595186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 42134121 - 42134182
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  42134121 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcgccc 42134182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 24368580 - 24368661
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||    |||||||||  |||| |||||||| |||||||||||||    
T  24368580 aatggttttggagtacaactcacagaaaccatttctgaatttat----ggtgcataaggattttcttatgcaccataaccgcgccc 24368661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 29945250 - 29945298
Alignment:
Q  12 ctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  29945250 ctgcataaattcagaaatggttttggagtacaactcacagaaaccattt 29945298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Original strand, 29945382 - 29945466
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    |||||||||||||||||||||| |||  | ||||||  |||||||||| ||||||||  |||| |||||||| ||||||||||||||    
T  29945382 aatggttttggagtacaactcagaaa--ccatttctaaatttatgcagagtgcataaggatttccttatgcaccataaccgcgcccg 29945466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 11354522 - 11354473
Alignment:
Q  12 ctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  11354522 ctgcataaattcataaatggttttggagtacaactcacagaaaccatttc 11354473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 14229349 - 14229406
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  14229349 aaaaccatttctggatttatgcagggtgcataaagatttccttatgcaccataaccgc 14229406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 14389873 - 14389926
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| ||||||||||||||||||| |||||||| |||| |||||    
T  14389873 caccctgcataaatccagaaatggttttggagtataactcacagaaaccatttc 14389926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 17893261 - 17893318
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  17893261 aaaactatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 17893318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 18928807 - 18928860
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| ||||| |||||||||||||||||||||| |||| |||||    
T  18928807 caccctgcataaatccagaattggttttggagtacaactcacagaaaccatttc 18928860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 31763937 - 31764018
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||| ||||||| | |||| ||||||||  ||||||||||||||| |||||||||||  |||| |||||||| |||||||||    
T  31763937 aatgattttggaatgcaacccacaaaaatcatttctggatttatgtagggtgcataaggatttccttatgcaccataaccgc 31764018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 45849297 - 45849350
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 104  Q
    |||||||||| |||||||||||||||||||||| ||||| |||||||| |||||    
T  45849297 aaaactatttatggatttatgcagggtgcataagaatttccttatgcaccataa 45849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 32595261 - 32595333
Alignment:
Q  41 acaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    |||||||||| |||| |||||| |||||| |||||||||||||  |||| |||||||| ||||||| ||||||    
T  32595261 acaactcacagaaacaatttctagatttaagcagggtgcataaggatttccttatgcaccataaccacgcccg 32595333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 9628587 - 9628646
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgc 110  Q
    ||||| ||| |||||||||||||||||||||||  |||| |||||||| |||||||||||    
T  9628587 aaaacaattactggatttatgcagggtgcataaggatttccttatgcaccataaccgcgc 9628646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 12070598 - 12070661
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccgg 114  Q
    ||||| ||||| | ||||||||||||||||||| ||||| |||||||| ||||||||| |||||    
T  12070598 aaaaccatttcggaatttatgcagggtgcataagaatttccttatgcaccataaccgcacccgg 12070661  T

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Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 15588548 - 15588587
Alignment:
Q  10 ccctgcataaattcagaaatggttttggagtacaactcac 49  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  15588548 ccctgcataaattcagaaatggttttgaagtacaactcac 15588587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 33157042 - 33156991
Alignment:
Q  57 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  33157042 atttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 33156991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 35754597 - 35754636
Alignment:
Q  7 acaccctgcataaattcagaaatggttttggagtacaact 46  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  35754597 acaccctgcataaattcataaatggttttggagtacaact 35754636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 35754737 - 35754788
Alignment:
Q  32 ttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    ||||||||||||||||||| |||| |||||||||||||||||  ||||||||    
T  35754737 ttttggagtacaactcacagaaaccatttctggatttatgcattgtgcataa 35754788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 47693746 - 47693691
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcata 82  Q
    ||||||||| || |||||||||||||||| |||| || ||||||||||||||||||    
T  47693746 aatggttttagaatacaactcacaaaaaccatttttgaatttatgcagggtgcata 47693691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 51904773 - 51904730
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttat 70  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  51904773 aatggttttggagtacaactcacataaattatttctggatttat 51904730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 6708346 - 6708388
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  6708346 caccctgcataaatgcagaaatgattttggagtacaactcaca 6708388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 1395193 - 1395246
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||| ||||| || ||||| ||||||||||||||||||| ||||||||||    
T  1395193 caccctgcttaaatccataaatgattttggagtacaactcacagaaactatttc 1395246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 9041066 - 9041013
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||| |||||||||||||||||||||||| ||| | |||| |||||    
T  9041066 caccctgcataatttcagaaatggttttggagtacaattcatagaaaccatttc 9041013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 9628614 - 9628561
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| ||| ||| |||||||||||||||||||| |||| |||||    
T  9628614 caccctgcataaatccagtaattgttttggagtacaactcacagaaaccatttc 9628561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 15588635 - 15588711
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 104  Q
    |||||||||||||||||| ||||| |||| |||| || |||||||||| ||||||||  |||| |||||||| |||||    
T  15588635 aatggttttggagtacaagtcacagaaaccatttatgaatttatgcagagtgcataa-gatttccttatgcaccataa 15588711  T

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Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 33157021 - 33157073
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| |||||||| ||||||||||||||||||| |||| |||||    
T  33157021 caccctgcataaatccagaaatg-ttttggagtacaactcacagaaaccatttc 33157073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 45849324 - 45849271
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| || |||| |||||||||||||||| |||||||| |||||    
T  45849324 caccctgcataaatccataaatagttttggagtacaactaacaaaaaccatttc 45849271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 47693873 - 47693828
Alignment:
Q  16 ataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||    
T  47693873 ataaatccagaaatggttttggagtacaactcacacaaaccatttc 47693828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 47693854 - 47693911
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||||||||||  |||||||||||  |||| ||||||||||||||||||    
T  47693854 aaaaccatttctggatttataaagggtgcataaagatttccttatgcatcataaccgc 47693911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 12796474 - 12796510
Alignment:
Q  24 agaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||||||||||||||||||| |||||||||    
T  12796474 agaaatggttttggagtacaactcacagaaactattt 12796510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 18952596 - 18952548
Alignment:
Q  13 tgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||  ||||||||||||||||||||||||||| |||| |||||    
T  18952596 tgcataaatctagaaatggttttggagtacaactcacagaaaccatttc 18952548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 14389900 - 14389853
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgca 98  Q
    ||||| |||||||||||||||||||||||||||  |||| ||||||||    
T  14389900 aaaaccatttctggatttatgcagggtgcataaggatttccttatgca 14389853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 32143755 - 32143814
Alignment:
Q  49 caaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||| |||||| ||||||||||| ||||||||  |||| |||||||| |||||||||    
T  32143755 caaaaaccatttctagatttatgcagagtgcataaggatttccttatgcaccataaccgc 32143814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 10974694 - 10974632
Alignment:
Q  46 tcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||| |||| || |||||||||||||||||||  |||| |||||||| |||||||||    
T  10974694 tcacagaaaccatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 10974632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 12796475 - 12796417
Alignment:
Q  55 ctatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||||||||||||||||| |||||| ||  |||| |||||||| ||||||||| ||||    
T  12796475 ctatttctggatttatgcaaggtgcagaaggatttccttatgcaccataaccgcacccg 12796417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 9041039 - 9041096
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||| | |||||||||||||||||  |||| |||||||| |||||||||    
T  9041039 aaaaccatttctgaaattatgcagggtgcataaggatttccttatgcaccataaccgc 9041096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Complemental strand, 23174446 - 23174401
Alignment:
Q  63 ggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||| ||||||||| ||||| |||||||| |||||||||    
T  23174446 ggatttatgcacggtgcataagaattttcttatgcaccataaccgc 23174401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 10497900 - 10497936
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  10497900 aaatggttttggagtacaactcacagaaaccatttct 10497936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 12070501 - 12070453
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagg 75  Q
    ||||||||||||||||||||||||||||  |||| |  |||||||||||    
T  12070501 aatggttttggagtacaactcacaaaaatcatttataaatttatgcagg 12070453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 20506705 - 20506669
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  20506705 aaatggttttggagtacaactcacataaaccatttct 20506669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 21256236 - 21256200
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  21256236 aaatggttttggagtacaactcacagaaaccatttct 21256200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 23277363 - 23277327
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  23277363 aaatggttttggagtacaactcacagaaaccatttct 23277327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 23921334 - 23921298
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  23921334 aaatggttttggagtacaactcacagaaaccatttct 23921298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 31084048 - 31084084
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  31084048 aaatggttttggagtacaactcacagaaaccatttct 31084084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 35197650 - 35197618
Alignment:
Q  29 tggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||||||||||| |||||    
T  35197650 tggttttggagtacaactcacaaaaaccatttc 35197618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 37642765 - 37642801
Alignment:
Q  26 aaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  37642765 aaatggttttggagtacaactcacagaaaccatttct 37642801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 4e-24; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 25119186 - 25119105
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||| |||||||| |||||||||    
T  25119186 aatggttttggagtacaactcacagaaaccatttctgaatttatgcagggtgcataagaatttccttatgcaccataaccgc 25119105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 21384869 - 21384788
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||||| ||||||| ||||| |||||||| |||||||||    
T  21384869 aatggttttggaatacaactcacagaaaccatttctggatttatgcaggatgcataagaatttccttatgcaccataaccgc 21384788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 22857568 - 22857487
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  22857568 aatggttttgaagtacaactcacaaaaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 22857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 14237858 - 14237773
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||| |||||||||||  |||| |||||||| ||||||| |||||    
T  14237858 aatgattttggagtacaactcacataaacaatttctggatttatgtagggtgcataaggatttccttatgcaccataacctcgccc 14237773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 10698653 - 10698572
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||| ||||||||| |||| |||||| ||||||||||||||||| ||  |||| |||||||| |||||||||||||    
T  10698653 gttttggagtgcaactcacagaaaccatttcttgatttatgcagggtgcacaaggatttccttatgcaccataaccgcgccc 10698572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 20522749 - 20522664
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    ||||||| |||||||||||||| | |||| ||||||| |||||||||||||||||||  |||| |||||||| ||||||| |||||    
T  20522749 aatggttctggagtacaactcaaagaaaccatttctgaatttatgcagggtgcataaatatttccttatgcaccataaccacgccc 20522664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 10588968 - 10588915
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  10588968 caccctgcataaattcaaaaatagttttggagtacaactcacagaaactatttc 10588915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 19281363 - 19281278
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||||||||||||| | | |||  ||||||| |||||||||||||||| ||  |||| |||||||| |||||||||||||    
T  19281363 aatggttttggagtacaacttatagaaagcatttctgaatttatgcagggtgcacaaggatttccttatgcaccataaccgcgccc 19281278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 22857692 - 22857639
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  22857692 caccctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 22857639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 7371113 - 7371059
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttct 62  Q
    |||||||| ||||| |||||||||||||||||||||||||||| |||| ||||||    
T  7371113 caccctgcttaaatccagaaatggttttggagtacaactcacagaaaccatttct 7371059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 11140464 - 11140418
Alignment:
Q  15 cataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  11140464 cataaattcagaaatggttttggagtacaactcacagaaattatttc 11140418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 129274 - 129210
Alignment:
Q  43 aactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||| |||||||||||||||||||  ||||||||||| ||||| |||||||| |||||||||    
T  129274 aactcacataaactatttctggatttatatagggtgcataa-aatttccttatgcaccataaccgc 129210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 20522863 - 20522810
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||| |||||||||||||||||||||||||||||||||| | |||| |||||    
T  20522863 caccctacataaattcagaaatggttttggagtacaactcatagaaaccatttc 20522810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 22857665 - 22857722
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  22857665 aaaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataaccgc 22857722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 21385004 - 21384952
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||||||  ||||||||||||||||||||||||||| |||| ||||    
T  21385004 caccctgcataaatctagaaatggttttggagtacaactcacagaaaccattt 21384952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 30387209 - 30387161
Alignment:
Q  14 gcataaattcagaaatggttttggagtacaactcacaaaaactatttct 62  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  30387209 gcataaatccagaaatggttttggagtacaactcacagaaaccatttct 30387161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 21384977 - 21385039
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||| |||||| ||||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  21384977 aaaaccatttctagatttatgcagggtgcataaggatttccttatgcaccataaccgcacccg 21385039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 7371086 - 7371143
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||||||||| |||||||||||||  |||| |||||||| |||||||||    
T  7371086 aaaaccatttctggatttaagcagggtgcataaagattttcttatgcaccataaccgc 7371143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 10588941 - 10588998
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||| || |||||||||||||||||||  |||| |||||||| |||||||||    
T  10588941 aaaactatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 10588998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 25119482 - 25119433
Alignment:
Q  11 cctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||| ||||    
T  25119482 cctgcataaatccagaaatggttttggagtacaactgacagaaaccattt 25119433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 25119458 - 25119515
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| ||||||||||||||||||| |||||||  |||| |||||||| |||||||||    
T  25119458 aaaaccatttctggatttatgcaggctgcataaggatttccttatgcaccataaccgc 25119515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 14237990 - 14237958
Alignment:
Q  12 ctgcataaattcagaaatggttttggagtacaa 44  Q
    |||||||||||||||||||||||||||||||||    
T  14237990 ctgcataaattcagaaatggttttggagtacaa 14237958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 19281499 - 19281447
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 60  Q
    ||||||||||||||  | |||| |||||||||||||||||||| |||||||||    
T  19281499 caccctgcataaatctaaaaatagttttggagtacaactcacagaaactattt 19281447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 25066282 - 25066204
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||| ||||||||||||| |||   |||||  ||||||||||||||||||| ||||| |||||  | |||||||||||||    
T  25066282 gttttgaagtacaactcacagaaa---tttctaaatttatgcagggtgcataagaatttccttatataccataaccgcgccc 25066204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 19284400 - 19284446
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaa 54  Q
    ||||||||||||||  | ||||||||||||||||||||||| |||||    
T  19284400 caccctgcataaatctaaaaatggttttggagtacaactcataaaaa 19284446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 25066401 - 25066367
Alignment:
Q  16 ataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||||||||||| ||||||||||||||||||||    
T  25066401 ataaattcagaaatagttttggagtacaactcaca 25066367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 19284427 - 19284370
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||| | ||||||||||||||||||||  |||| |||||||| |||||||||    
T  19284427 aaaaccatttttagatttatgcagggtgcataaggatttccttatgcaccataaccgc 19284370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 1212 - 1293
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  1212 aatgattttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 1293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 23624 - 23543
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  23624 aatggttttggagtacaactcacggaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 23543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 3122 - 3203
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 112  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| ||||||||  ||||| ||||||    
T  3122 gttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaagatttccttatgcacgataacagcgccc 3203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 17956 - 17856
Alignment:
Q  7 acaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataacc 106  Q
    |||||||||||||||||| ||||| |||||  |||||||| |||  ||| ||||||||||||||||| |||||||||| |||| |||||||| |||||||    
T  17956 acaccctgcataaattcaaaaatgattttgaggtacaacttacagcaaccatttctggatttatgca-ggtgcataatgattttcttatgcaccataacc 17858  T
Q  107 gc 108  Q
    ||    
T  17857 gc 17856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 46; Significance: 5e-17; HSPs: 4)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 15656 - 15575
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||||| |||||||| ||  | |||||||| |||||||||    
T  15656 aatggttttgaagtacaactcacagaaaccatttctggatttatgcagagtgcataagaaaatccttatgcaccataaccgc 15575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 33781 - 33861
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    |||||||||||||||||| | ||| |||| |||| |||||||||||| ||||||||| ||||| |||||||| |||||||||    
T  33781 aatggttttggagtacaaatgacagaaaccatttttggatttatgca-ggtgcataagaatttccttatgcaccataaccgc 33861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 33672 - 33615
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||| |||||| ||||||||||||||||||||  |||| |||||||| |||||||||    
T  33672 aaaaccatttctagatttatgcagggtgcataaggatttccttatgcaccataaccgc 33615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 33645 - 33687
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    ||||||||||||||  ||||||||||||||| |||||||||||    
T  33645 caccctgcataaatctagaaatggttttggaatacaactcaca 33687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 20135 - 20082
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||    
T  20135 caccctgcataaattcagaaatggtgttggagtacaactcacagaaacaatttc 20082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 20000 - 19954
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgca 73  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||    
T  20000 aatggtttttgagtacaactcacagaaaccatttctggatttatgca 19954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 20114 - 20170
Alignment:
Q  57 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 113  Q
    ||||||| |||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  20114 atttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgcacccg 20170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 72666 - 72747
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||||||||||||||||||||||||  ||||||  |||||||||| ||||||||  ||||  ||||||| |||||||||    
T  72666 aatggttttggagtacaactcacaaaaatcatttctaaatttatgcagagtgcataaggatttcgttatgcaccataaccgc 72747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 9720 - 9672
Alignment:
Q  13 tgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  9720 tgcataaatccagaaatggttttggagtacaactcacataaactatttc 9672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 9590 - 9534
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||||| ||||||||    
T  9590 aatggttttggagtataactcacagaaaccatttctgaatttatgcagagtgcataa 9534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 80743 - 80691
Alignment:
Q  31 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    ||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  80743 gttttggggtacaactcacagaaaccatttctggatttatgcggggtgcataa 80691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 80882 - 80828
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttct 62  Q
    ||||||||| |||||||||||||||||| ||||| |||||||| |||| ||||||    
T  80882 caccctgcaaaaattcagaaatggtttttgagtataactcacagaaaccatttct 80828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 80853 - 80912
Alignment:
Q  49 caaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 108  Q
    ||||||| ||||||| |||| ||||||||||||||  |||| |||||||| |||||||||    
T  80853 caaaaaccatttctgaatttttgcagggtgcataaggattttcttatgcaccataaccgc 80912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 51934 - 51998
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgc 72  Q
    |||||||||||||| |||||||| ||||||||||||| | |||||||| ||||||  ||||||||    
T  51934 caccctgcataaatccagaaatgattttggagtacaattgacaaaaaccatttctaaatttatgc 51998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 51955 - 51908
Alignment:
Q  57 atttctggatttatgcagggtgcataataatttacttatgcatcataa 104  Q
    |||||||||||||||||||||||||||  |||| |||||||| |||||    
T  51955 atttctggatttatgcagggtgcataaggatttccttatgcaccataa 51908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 96028 - 96081
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 61  Q
    ||||||||||||||  ||||||||||||||||||||| ||||| |||| |||||    
T  96028 caccctgcataaatctagaaatggttttggagtacaaatcacagaaaccatttc 96081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 96055 - 96001
Alignment:
Q  51 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 105  Q
    ||||| |||||| ||||||||||||||||||||  |||| |||||||| ||||||    
T  96055 aaaaccatttctagatttatgcagggtgcataaggattttcttatgcaccataac 96001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 75772 - 75716
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 83  Q
    |||||||||||| ||||||| ||| |||| |||| | ||||||||||||||||||||    
T  75772 aatggttttggaatacaacttacagaaaccatttttagatttatgcagggtgcataa 75716  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 61
Target Start/End: Original strand, 37261 - 37295
Alignment:
Q  27 aatggttttggagtacaactcacaaaaactatttc 61  Q
    |||||||||||||||||||| ||||||||||||||    
T  37261 aatggttttggagtacaactgacaaaaactatttc 37295  T

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Target: scaffold0126 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 37662 - 37704
Alignment:
Q  8 caccctgcataaattcagaaatggttttggagtacaactcaca 50  Q
    |||||| ||||||| || |||||||||||||||||||||||||    
T  37662 caccctacataaatccataaatggttttggagtacaactcaca 37704  T

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