View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4415_high_3 (Length: 303)
Name: NF4415_high_3
Description: NF4415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4415_high_3 |
 | |
|
| [»] scaffold0044 (1 HSPs) |
| | |
|
| [»] scaffold0440 (2 HSPs) |
| | |
|
Alignment Details
Target: scaffold0044 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 45000 - 45301
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45000 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
45099 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45100 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
45199 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45200 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
45299 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
45300 |
at |
45301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 302; Significance: 1e-170; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 197819 - 198120
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
197819 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
197918 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
197919 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
198018 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
198019 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
198118 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
198119 |
at |
198120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 312656 - 312957
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312656 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
312755 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312756 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
312855 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312856 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
312955 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
312956 |
at |
312957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 43807618 - 43807919
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
43807618 |
acttgaattaaaacaagctaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatg |
43807717 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
43807718 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggcttc |
43807817 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43807818 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
43807917 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
43807918 |
at |
43807919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 30405938 - 30406239
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
30405938 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaatcttcaatg |
30406037 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
30406038 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgcagtgctcccttgttcacttgttcccttagaaaatggaactttgcttc |
30406137 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30406138 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
30406237 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
30406238 |
at |
30406239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 10 - 302
Target Start/End: Complemental strand, 1291337 - 1291045
Alignment:
| Q |
10 |
aaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgccttagtga |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||||||| |
|
|
| T |
1291337 |
aaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagtttgatgaatctgtcaaccttcaaagctttagtga |
1291238 |
T |
|
| Q |
110 |
atatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttctatgtgctt |
209 |
Q |
| |
|
|||| ||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
1291237 |
atatatctgcaagctgatgctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctccctcagaaaatgaaacttggcttctatatgctt |
1291138 |
T |
|
| Q |
210 |
gcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctccat |
302 |
Q |
| |
|
|||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||||||| |||| ||||||||||| |
|
|
| T |
1291137 |
gcttctcccaagcagaactggatttcttgccaagcttatagtagatttgttgtctatgaacaatattataggtctgttaacttctatctccat |
1291045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 2 - 302
Target Start/End: Complemental strand, 41949823 - 41949531
Alignment:
| Q |
2 |
cttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgc |
101 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
41949823 |
cttgaattaaaagaaactaacatcctcccttaattcaagtttccacttccttcattcaaatcaagcttctgagcttgatgaaactgtcaaccttcaatgc |
41949724 |
T |
|
| Q |
102 |
cttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttct |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| ||||| |||| | |
|
|
| T |
41949723 |
cttagtgaatatgtctgcaagctgcagctcagtagagcaatgaacaatctgtag--------tgttcacttgctccctcaaaaaatggaacttagcttat |
41949632 |
T |
|
| Q |
202 |
atgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcca |
301 |
Q |
| |
|
|||||||||||||| |||| || || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
41949631 |
atgtgcttgcttctcccatacaaaattggatttcttgctaagcttatagcagatttgttgtccatgaacaattctataggtctgctaacctctatctcca |
41949532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 35 - 300
Target Start/End: Original strand, 31473324 - 31473589
Alignment:
| Q |
35 |
ttcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatgtctgcaagctgcagctcagt |
134 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
31473324 |
ttcaagtttccacttccttcatggcagtcaaacttcttagcttgatgaacctgtcaaccttcaataccttagtgaatatgtctgcaagctgcagctcagt |
31473423 |
T |
|
| Q |
135 |
agaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttctatgtgcttgcttcttccatgcagaactggattt |
234 |
Q |
| |
|
|| ||||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||| ||||||| |
|
|
| T |
31473424 |
ggagcaatggacaatctgcagttctcccttgttcacttgctccctcagaaaatggaacttagcttctatatgcttgcttcttccatgaagaattggattt |
31473523 |
T |
|
| Q |
235 |
cttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||| |||| | |||||||||||||| ||||||||| |
|
|
| T |
31473524 |
cttgctaagcttatagaagatttgttatctatgaacaatgcaataggtctgctaacttctatctcc |
31473589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 24 - 302
Target Start/End: Original strand, 27435339 - 27435617
Alignment:
| Q |
24 |
tcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatgtctgcaagc |
123 |
Q |
| |
|
||||| |||||||||||||| |||||| ||||| ||||||||||| | ||||||||||| |||||| ||||||||| |||||||||||| ||||||||| |
|
|
| T |
27435339 |
tcctctcttaattcaagttttcacttctttcatgccaatcaaactctttagcttgatgaacctgtcatccttcaatggcttagtgaatatttctgcaagc |
27435438 |
T |
|
| Q |
124 |
tgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttctatgtgcttgcttcttccatgca |
223 |
Q |
| |
|
||||||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||||| ||| |
|
|
| T |
27435439 |
tgcagcttagtgaaacaatgaacaatctgcaatgctcccttgttcacttgctccctcagaaaatggaacttagcctctatgtgtttgcttcttccaagca |
27435538 |
T |
|
| Q |
224 |
gaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctccat |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||| ||| |||| ||| |||||||| || ||||||||||| |
|
|
| T |
27435539 |
aaactggatttcttgctaagcttatagcagatctgttatctttgaacaatgttattggtctgctcacttctatctccat |
27435617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 17782356 - 17782570
Alignment:
| Q |
16 |
aactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatgt |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||| |||||||| ||||| ||||||||||| ||||||| |||| | ||| |||| | | |
|
|
| T |
17782356 |
aactaacatcctcccttaattcaagtttccactttcaccataccaatcaagcttcttagcttgatgaacctgtcaaatttcagaggtttaatgaacaaat |
17782455 |
T |
|
| Q |
116 |
ctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttctatgtgcttgcttct |
215 |
Q |
| |
|
|| ||| |||||| |||||||||||||| ||||||| | |||| ||||||| ||||| || || ||||||| | || ||||| ||||| |||||||| |
|
|
| T |
17782456 |
ctacaatctgcagttcagtagaacaatggacaatcttcaatgcttccttgtttacttgttctctaagaaaatcgattttggcttcaatgtgtttgcttct |
17782555 |
T |
|
| Q |
216 |
tccatgcagaactgg |
230 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
17782556 |
tccatgcaaaactgg |
17782570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 44912831 - 44912931
Alignment:
| Q |
99 |
tgccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgct |
198 |
Q |
| |
|
|||||||||||||||||| | ||| |||||||||||||||||||| | ||||| ||| || || ||||| |||| ||||| ||||||||||||||| || |
|
|
| T |
44912831 |
tgccttagtgaatatgtcaggaagttgcagctcagtagaacaatgga-aatctttagagcccctttgtttacttattccctaagaaaatgaaactttact |
44912929 |
T |
|
| Q |
199 |
tc |
200 |
Q |
| |
|
|| |
|
|
| T |
44912930 |
tc |
44912931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 302; Significance: 1e-170; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 54167479 - 54167780
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54167479 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
54167578 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54167579 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
54167678 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54167679 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
54167778 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
54167779 |
at |
54167780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 21850222 - 21849920
Alignment:
| Q |
1 |
acttgaattaaaa-caaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaat |
99 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||| |
|
|
| T |
21850222 |
acttgaattaaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaataaagcttctgagcttgttgaatctgtcaaccttcaat |
21850123 |
T |
|
| Q |
100 |
gccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgctt |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
21850122 |
gccttagtgaatatgtctgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgctt |
21850023 |
T |
|
| Q |
200 |
ctatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctc |
299 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21850022 |
ctatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctc |
21849923 |
T |
|
| Q |
300 |
cat |
302 |
Q |
| |
|
||| |
|
|
| T |
21849922 |
cat |
21849920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 43554314 - 43554013
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
43554314 |
acttgaattaaaacaaactaacatctccccttaattcaagtttccacttccttcattcaaatcaagcttctgagcttgatgaacctgtcaaccttcaatg |
43554215 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||| ||||||||||||| | |||| ||||||||||| |||||||||||||||||||||| ||||| |
|
|
| T |
43554214 |
ccttagtgaatatgtttgcaagctgcagctcaatagagcaatgaacaatctacaatgcttccttgttcactagctccctcagaaaatgaaacttggcttc |
43554115 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| |||| | |||||||||||||||| ||||||| |
|
|
| T |
43554114 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagattataccatatttgttgtctatgaacaatgccataggtctgctaacctatatctcc |
43554015 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
43554014 |
at |
43554013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 15 - 303
Target Start/End: Original strand, 53353126 - 53353419
Alignment:
| Q |
15 |
aaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgat-----gaatctgtcaaccttcaatgccttagtga |
109 |
Q |
| |
|
|||||| ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||| ||| ||||||||||||||||| || |||| |
|
|
| T |
53353126 |
aaactagcatcctctcttaatttaagtttccacttccttcatgccaatcaagcttctgagcttgatatgatgaacctgtcaaccttcaatgcttttgtga |
53353225 |
T |
|
| Q |
110 |
atatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttctatgtgctt |
209 |
Q |
| |
|
||||||||||||||||||||||||| || ||||| |||||||| | ||| || ||||||||||||||||| |||||||| || || || | ||| ||||| |
|
|
| T |
53353226 |
atatgtctgcaagctgcagctcagtggagcaatggacaatctgcaatgcacctttgttcacttgctcccttagaaaatggaatttagcctttatatgctt |
53353325 |
T |
|
| Q |
210 |
gcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctccatt |
303 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
53353326 |
gcttctcccatgcagaactggatttattgctaagcttatagcatatttgttgtcgatgaacaatgctataggtctgctaacctctatctccatt |
53353419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 1299075 - 1298999
Alignment:
| Q |
15 |
aaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaa |
91 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||| |||||||| ||| | |||| | |||||||||||| |
|
|
| T |
1299075 |
aaactaacatcctcccttaattcaagtttccaattctaccataccaatcaagcttttaagctcgttgaatctgtcaa |
1298999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0440 (Bit Score: 290; Significance: 1e-163; HSPs: 2)
Name: scaffold0440
Description:
Target: scaffold0440; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 7528 - 7227
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
7528 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaacctttaatg |
7429 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7428 |
ccttagtgaatatgtctgcaagctacagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
7329 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7328 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
7229 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
7228 |
at |
7227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0440; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 3002 - 2731
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
3002 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaacctttaatg |
2903 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
2902 |
ccttagtgaatatgtctgcaagcttcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgtaactttgcttc |
2803 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaa |
272 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2802 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaa |
2731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 290; Significance: 1e-163; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 12023311 - 12023010
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
12023311 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatg |
12023212 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12023211 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
12023112 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
12023111 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagtaattctataggtctgctaacctctatctcc |
12023012 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
12023011 |
at |
12023010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 7099509 - 7099810
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
7099509 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatg |
7099608 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
7099609 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggcttc |
7099708 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7099709 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
7099808 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
7099809 |
at |
7099810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 16798691 - 16798390
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
16798691 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatg |
16798592 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
16798591 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggcttc |
16798492 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16798491 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
16798392 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
16798391 |
at |
16798390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 37682058 - 37681757
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
37682058 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatg |
37681959 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
37681958 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcatttgctccctcagaaaatgaaactttgcttc |
37681859 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
37681858 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcaaatttgttgtctatgagtaattctataggtctactaacctctatctcc |
37681759 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
37681758 |
at |
37681757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 40367735 - 40368036
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
40367735 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatg |
40367834 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
40367835 |
ccttagtgaatatgtctgcaagctgcagcttagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaacttggcttc |
40367934 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40367935 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
40368034 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
40368035 |
at |
40368036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 10277226 - 10276925
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
10277226 |
acttgaattaaaacaaactaacatcctctcttaattcgagtttccacttccttcattccaatcaagcttctgagcttgatgaacctgtcaaccttcaatg |
10277127 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10277126 |
ccttagtgaatatgtccgcaagctgtagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctccctcagaaaatgaaacttggcttc |
10277027 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
10277026 |
tatatgcttgcttcttccatgcagaattggatttcttactaagcttatagcagatttgttgtatatgaacaattatataggtctgctaacctctatctcc |
10276927 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
10276926 |
at |
10276925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 26336942 - 26337111
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
26336942 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaacctgtcaaccttcaatg |
26337041 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcac |
170 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||||||||||||||| |
|
|
| T |
26337042 |
ccttagtgaatatgtctacaagctgcagctcagtagagcaatgaaaaatctgcagtgctcccttgttcac |
26337111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 302
Target Start/End: Original strand, 26454406 - 26454693
Alignment:
| Q |
15 |
aaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatg |
114 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||| ||||||| || || |||||||||||| ||||||||||||| | ||||||||||| |
|
|
| T |
26454406 |
aaactaacttcctcccttaattcaagtttccacttcaaccataccaatcatgctccttagcttgatgaatatgtcaaccttcaaaggtttagtgaatata |
26454505 |
T |
|
| Q |
115 |
tctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttctatgtgcttgcttc |
214 |
Q |
| |
|
|||||||| ||||||||| | |||||||||||||| || | ||| ||||||| ||||| ||||||||||| |||||||| |||| ||||| || || |
|
|
| T |
26454506 |
tctgcaagttgcagctcaatggaacaatgaacaatttgcaatgcctccttgttaacttgttccctcagaaagtgaaacttaacttcaatgtgtttactca |
26454605 |
T |
|
| Q |
215 |
ttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctccat |
302 |
Q |
| |
|
||||||||| || |||||| |||||||| | |||| |||||||| ||||||| |||| |||| || || |||| ||||| ||||| |
|
|
| T |
26454606 |
ttccatgcaaaattggattatttgctaagttaatagatgatttgttatctatgaacaatgatataagtatgttaacttctatttccat |
26454693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 30067094 - 30066992
Alignment:
| Q |
163 |
ttgttcacttgctccctcagaaaatgaaactttgcttctatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgt |
262 |
Q |
| |
|
||||||||||| || || |||||||||||||||||||| || ||||||||||||||||||| || ||||| | |||||| |||| ||||||| |||| |
|
|
| T |
30067094 |
ttgttcacttgttctctgagaaaatgaaactttgcttcaatatgcttgcttcttccatgcaacacatgatttttggctaagtttatggcagattgattgt |
30066995 |
T |
|
| Q |
263 |
cta |
265 |
Q |
| |
|
||| |
|
|
| T |
30066994 |
cta |
30066992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 263
Target Start/End: Complemental strand, 25632735 - 25632487
Alignment:
| Q |
15 |
aaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatg |
114 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||| | ||| ||||||| ||||| || |||||||| |||||||||||| | |||||||| || |
|
|
| T |
25632735 |
aaactaacatccttccttaattcaagttttcactctcaccataccaatcaggcttctcagtttgatgaacatgtcaaccttcacaggtttagtgaacata |
25632636 |
T |
|
| Q |
115 |
tctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttctatgtgcttgcttc |
214 |
Q |
| |
|
|| | ||| | | |||||||| ||||| | ||| | ||||| | ||||| ||||| || | ||||||||| || ||||| ||||| |||| | |
|
|
| T |
25632635 |
tcaggaagttttatatcagtagatcaatggataatattcagtgcctctttgtttacttgtaatctaataaaatgaaagttggcttcagtgtgcgtgctcc |
25632536 |
T |
|
| Q |
215 |
ttccatgcagaactggatttcttgctaagcttatagcagatttgttgtc |
263 |
Q |
| |
|
||||| |||||||||||||| | || ||| ||||||| ||||||||||| |
|
|
| T |
25632535 |
ttccaagcagaactggatttttagccaagtttatagctgatttgttgtc |
25632487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 286; Significance: 1e-160; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 8055414 - 8055113
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8055414 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatg |
8055315 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8055314 |
ccttagtgaatatgtctgcaaactgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
8055215 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8055214 |
tatatgcttgcttcttccatgtagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
8055115 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
8055114 |
at |
8055113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 36675073 - 36674772
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
36675073 |
acttgaattaaaacaaactaacatcctcccgtaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatg |
36674974 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
36674973 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggcttc |
36674874 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36674873 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
36674774 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
36674773 |
at |
36674772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 35950573 - 35950874
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| |
|
|
| T |
35950573 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctaagcttgatgaacctgtcaaccttcaatg |
35950672 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
35950673 |
ccttagtgaatatgtctgcaagctgtagctcagtggagcaatgaacaatctgcagtgctcccttgttcacttgctccctcagaaaatgaaacttggcttc |
35950772 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
35950773 |
tatatgcttgcttcttccatgcataactggatttattgctaagcttatagcagatttgttgtctatgaacaattatataggtctgctaacctctatctcc |
35950872 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
35950873 |
at |
35950874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 7940218 - 7940519
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
7940218 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatg |
7940317 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
7940318 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggcttc |
7940417 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7940418 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
7940517 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
7940518 |
at |
7940519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 27761419 - 27761118
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
27761419 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatg |
27761320 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
27761319 |
ccttagtgaatatgtctgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgttcacttgctcccttagaaaatgaaactttgtttc |
27761220 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27761219 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
27761120 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
27761119 |
at |
27761118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 17 - 302
Target Start/End: Original strand, 13828256 - 13828540
Alignment:
| Q |
17 |
actaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatgtc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||| ||||| |||||||||||||| |
|
|
| T |
13828256 |
actaacatcctcccttaattcaagtttccacttccttcatgccaatcaaacttctgagcttgatgaacccgtcaacctttaatgc-ttagtgaatatgtc |
13828354 |
T |
|
| Q |
117 |
tgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttctatgtgcttgcttctt |
216 |
Q |
| |
|
|||||| ||||||||||| || ||||| ||||||| | ||| || ||||| ||||||||||||| |||||||||||| || |||||||| ||||||||| |
|
|
| T |
13828355 |
tgcaagttgcagctcagtggagcaatggacaatctacaatgcacctttgtttacttgctccctcaaaaaatgaaacttagcctctatgtgtttgcttctt |
13828454 |
T |
|
| Q |
217 |
ccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctccat |
302 |
Q |
| |
|
||||||| |||||||||||||||||||||||| | ||||||||| ||||||| |||| | |||||| | ||||| ||||||||||| |
|
|
| T |
13828455 |
ccatgcaaaactggatttcttgctaagcttattgtagatttgttatctatgaacaatgcaataggtatactaacttctatctccat |
13828540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 22580938 - 22580648
Alignment:
| Q |
12 |
aacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgccttagtgaat |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||| | ||| | ||||| ||||||||||| |||||||||||| | || ||||| |
|
|
| T |
22580938 |
aacaaactaacatcctcccttaattcaagtttccactttcaccatactaattatgcttcttagcttgatgaacgtgtcaaccttcataggtttggtgaac |
22580839 |
T |
|
| Q |
112 |
atgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttctatgtgcttgc |
211 |
Q |
| |
|
| |||||||||||||| ||||| || || |||||||||| | |||| ||||||| ||||| || | |||||||| || || || || |||||||||| |
|
|
| T |
22580838 |
aaatctgcaagctgcagttcagtggagcagtgaacaatcttcaatgcttccttgtttacttgttctataagaaaatggaatttggcctcaatgtgcttgc |
22580739 |
T |
|
| Q |
212 |
ttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctccat |
302 |
Q |
| |
|
| |||||||| | |||||||||| | |||||| |||||| |||||||||||||| | ||| |||||||| || ||||||| || ||||| |
|
|
| T |
22580738 |
tccttccatgtaaaactggatttttagctaagtttatagttgatttgttgtctataaacaaacctataggtttgttaacctcaatttccat |
22580648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 282; Significance: 1e-158; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 8315639 - 8315940
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8315639 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaacctttaatg |
8315738 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8315739 |
ccttagtgaatatgtctgcaagcttcagctcagtagatcaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
8315838 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8315839 |
tatatgcttgcttcttccatgcagaactggatttcttgctaaacttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
8315938 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
8315939 |
at |
8315940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 17886978 - 17887281
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccac--ttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaa |
98 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
17886978 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaa |
17887077 |
T |
|
| Q |
99 |
tgccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgct |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| || || ||| |
|
|
| T |
17887078 |
tgccttagtgaatatgtctgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgtttacttgctccctcagaaaatggaagttagct |
17887177 |
T |
|
| Q |
199 |
tctatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatct |
298 |
Q |
| |
|
|||| || || |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
17887178 |
tctacatgtttacttcttccatgcagaactagatttcttgctaagcttatagctgatttgttgtctatgaacaattctataggtctgctaacctctatct |
17887277 |
T |
|
| Q |
299 |
ccat |
302 |
Q |
| |
|
|||| |
|
|
| T |
17887278 |
ccat |
17887281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 27552245 - 27552453
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
27552245 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatatgtcaaccttcaatg |
27552344 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
27552345 |
ccttagtgaatatgtctgcaagctgcagctcagtagagcaatgaacaatctgcagtgctcccttgtttacttgctcccttagaaaatgaaacttggcttc |
27552444 |
T |
|
| Q |
201 |
tatgtgctt |
209 |
Q |
| |
|
||| ||||| |
|
|
| T |
27552445 |
tatatgctt |
27552453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 17163633 - 17163431
Alignment:
| Q |
15 |
aaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatg |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17163633 |
aaactaacatcctcccttaattcaagtttccacttccttcataccaatcaagcttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatg |
17163534 |
T |
|
| Q |
115 |
tctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttctatgtgcttgcttc |
214 |
Q |
| |
|
|||||||| |||||||||| || ||||| |||||||| | ||| || |||||||||| ||||||||||||||| |||||||| |||| ||| ||||||| |
|
|
| T |
17163533 |
tctgcaagaagcagctcagtggagcaatggacaatctgcaatgcacctttgttcactttctccctcagaaaatggaactttgcctctacgtgtttgcttc |
17163434 |
T |
|
| Q |
215 |
ttc |
217 |
Q |
| |
|
||| |
|
|
| T |
17163433 |
ttc |
17163431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 207 - 302
Target Start/End: Original strand, 27568524 - 27568619
Alignment:
| Q |
207 |
cttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctccat |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27568524 |
cttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctccat |
27568619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 115 - 262
Target Start/End: Complemental strand, 3596480 - 3596333
Alignment:
| Q |
115 |
tctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttctatgtgcttgcttc |
214 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||| | |||| |||||| ||||| ||||| ||||| |||||||| ||||| |||||||| || | |
|
|
| T |
3596480 |
tctgcaagttgcagctcagtagaacaatggacaatcttcaatgcttgcttgtttacttgttccctaagaaagtgaaacttagcttcaatgtgcttcctcc |
3596381 |
T |
|
| Q |
215 |
ttccatgcagaactggatttcttgctaagcttatagcagatttgttgt |
262 |
Q |
| |
|
||||||||| ||||||||| || ||||| ||||||| |||||||||| |
|
|
| T |
3596380 |
ttccatgcaaaactggattctttactaagtttatagccgatttgttgt |
3596333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 8855275 - 8855339
Alignment:
| Q |
15 |
aaactaacatcctcccttaattcaagttt-ccacttccttcattccaatcaaacttctgagcttg |
78 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| | | |||||||||||| |||||||||||| |
|
|
| T |
8855275 |
aaactaacatcctcccttaattcaagttttccaacttcaccattccaatcaagcttctgagcttg |
8855339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 23256385 - 23256303
Alignment:
| Q |
15 |
aaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttca |
97 |
Q |
| |
|
|||| |||||||||||||||||| ||||||| || | || ||| |||| ||||| ||||||||||| ||||||||||||| |
|
|
| T |
23256385 |
aaaccaacatcctcccttaattctggtttccattttcaccaaaccagtcaagcttcttagcttgatgaacctgtcaaccttca |
23256303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 3597625 - 3597592
Alignment:
| Q |
16 |
aactaacatcctcccttaattcaagtttccactt |
49 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
3597625 |
aactaacatcctcccttaattcaagtttcaactt |
3597592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 282; Significance: 1e-158; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 26316035 - 26315734
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26316035 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatg |
26315936 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
26315935 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggcttc |
26315836 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26315835 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
26315736 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
26315735 |
at |
26315734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 43591956 - 43592257
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| |
|
|
| T |
43591956 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttctacttccttcattccaatcaagcttttgagcttgatgaacctgtcaaccttcaatg |
43592055 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||| ||||||||||||| || ||||||||||||||||| ||||||| |||||| ||||| |||| |
|
|
| T |
43592056 |
ccttagtgaatatgtctgcaagttgtagctcagtagagcaatgaacaatctacagagctcccttgttcacttggtccctcataaaatggaacttagcttt |
43592155 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
43592156 |
tatatgcttgcttctcccatgcagaactgaatttcttgctaagcttatagcagatttgttgtctatgaacaattatataggtctgctaacctctatctcc |
43592255 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
43592256 |
at |
43592257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 266
Target Start/End: Complemental strand, 30647373 - 30647122
Alignment:
| Q |
15 |
aaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatg |
114 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||| ||| |||||||| ||||| |||||| | || ||| ||| ||||| ||||||||||| || |
|
|
| T |
30647373 |
aaactaacatcctcccttaaatcaagtttccaattctaccatgccaatcaagcttctaagcttgttaaacctgacaatcttcatagccttagtgaacata |
30647274 |
T |
|
| Q |
115 |
tctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttctatgtgcttgcttc |
214 |
Q |
| |
|
| |||||||||| ||||| |||||||| |||| || ||| ||||| ||| | | || ||||| |||||||| ||||||||||| ||||| ||||| | |
|
|
| T |
30647273 |
ttcgcaagctgcaaatcagtggaacaatggacaacctttagagctcctttggttaactgttccctaagaaaatggaactttgcttcaatgtgtttgctcc |
30647174 |
T |
|
| Q |
215 |
ttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctat |
266 |
Q |
| |
|
||||||||| |||||| ||| | | |||| |||||| | ||||||||||| |
|
|
| T |
30647173 |
ttccatgcaaaactgggtttttggataagtttatagttaacttgttgtctat |
30647122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 278; Significance: 1e-155; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 44151580 - 44151279
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
44151580 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagcttctgagcttgatgaatctgtcaaccttcaatg |
44151481 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
44151480 |
ccttagtgaatatgtctgcaagctgcagcttagtagaacaatgaacaatctgaagtgctcccttgttcacttgctccctcagaaaatggaacttggcttc |
44151381 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44151380 |
tatatgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
44151281 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
44151280 |
at |
44151279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 8892756 - 8893057
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
8892756 |
acttgaattaaaacaaactaacatcctcccttaattcaaatttccacttccttcattccaatcaaccttttgagcttgatgaatctgtcaaccttcaatg |
8892855 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
8892856 |
ccttagtgaatatgtctgcaagttgcagctcagtagagcaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatggaactcagcttc |
8892955 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8892956 |
tatatgtttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgattaattctataggtctgctaacctctatctcc |
8893055 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
8893056 |
at |
8893057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 2 - 302
Target Start/End: Original strand, 50628066 - 50628366
Alignment:
| Q |
2 |
cttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgc |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
50628066 |
cttgaattaaaacaaactaacatcctcccttaattcaagtttccactgccttcattccaatcaagcttctgagcttgatgaacctgtcaaccttcaatgc |
50628165 |
T |
|
| Q |
102 |
cttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttct |
201 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
50628166 |
cttagtgaatatgtctgcaagctgcagctcagtagagcaatgaacaatctacagtgctcccttgttcacttgctccctcagaaaatgaaacttggcttct |
50628265 |
T |
|
| Q |
202 |
atgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcca |
301 |
Q |
| |
|
|| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
50628266 |
atatgcttgcttcttccatgcggaactgaatttcttgctaagcttatagcagatttgttgtctatgaacaattctataggtctgctaacttctatctcca |
50628365 |
T |
|
| Q |
302 |
t |
302 |
Q |
| |
|
| |
|
|
| T |
50628366 |
t |
50628366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 31359173 - 31358873
Alignment:
| Q |
1 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| |
|
|
| T |
31359173 |
acttgaattaaaacaaactaacatcctcccttaattcaagtttccacttccttcattccaatcaagct-ctgagcttgatgaacctgtcaaccttcaatg |
31359075 |
T |
|
| Q |
101 |
ccttagtgaatatgtctgcaagctgcagctcagtagaacaatgaacaatctgtagtgctcccttgttcacttgctccctcagaaaatgaaactttgcttc |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
31359074 |
ccttaatgaatatgtctgcaagctgcagctcagtagagcaatgaacaatctacagtgctcccttgttcacttgctccctcagaaaatgaaacttgacttc |
31358975 |
T |
|
| Q |
201 |
tatgtgcttgcttcttccatgcagaactggatttcttgctaagcttatagcagatttgttgtctatgagcaattctataggtctgctaacctctatctcc |
300 |
Q |
| |
|
||| ||||||||||| ||||||| |||| |||||||| ||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
31358974 |
tatatgcttgcttctcccatgcataactagatttctttctaagcttataacagatttgttgtctatgaacaatgctataggtctgctaacctctatctcc |
31358875 |
T |
|
| Q |
301 |
at |
302 |
Q |
| |
|
|| |
|
|
| T |
31358874 |
at |
31358873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 29258396 - 29258261
Alignment:
| Q |
16 |
aactaacatcctcccttaattcaagtttccacttccttcattccaatcaaacttctgagcttgatgaatctgtcaaccttcaatgccttagtgaatatgt |
115 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||| |||| |||||||| | ||| || ||||| || || ||||| || | | |||||||| | | |
|
|
| T |
29258396 |
aactaatatcctcccttaattcaagtttaaacttttgtcataccaatcaagcctcttagtttgattaacctttcaacttttagaggtttagtgaacaaat |
29258297 |
T |
|
| Q |
116 |
ctgcaagctgcagctcagtagaacaatgaacaatct |
151 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29258296 |
ctgcaagctgtagctcagtagaacaatgaacaatct |
29258261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 43
Target Start/End: Complemental strand, 1834115 - 1834087
Alignment:
| Q |
15 |
aaactaacatcctcccttaattcaagttt |
43 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1834115 |
aaactaacatcctcccttaattcaagttt |
1834087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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