View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4417-Insertion-10 (Length: 249)
Name: NF4417-Insertion-10
Description: NF4417
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4417-Insertion-10 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 8 - 249
Target Start/End: Original strand, 33210009 - 33210250
Alignment:
| Q |
8 |
acaataagacctaaattttatcgagaaataaagaaagtgtcagtattttagattttgcttattatagaaatcagggttgctttgctcattgtaaagaacc |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33210009 |
acaataagacctaaattttatcgagaaataaagaaagtgtcagtattttagattttacttattatagaaatcagggttgctttgctcattgtaaagaacc |
33210108 |
T |
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| Q |
108 |
agaaagtgtcagtattttaatactcgattgagtgagtttttgtgaccgtaatcaaaagcaattggtgctggtggataaacacagcacgtattattattat |
207 |
Q |
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|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |
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| T |
33210109 |
agaaagtgtcagtattttaatacttggttgagtgagtttttgtgaccgtaatcaaaagcaattggtgttggtggataaacacagcacatattattattat |
33210208 |
T |
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| Q |
208 |
ttaatgaaacaacataaaccttaatctattggtcatagtcag |
249 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
33210209 |
ttaatgaaacaacataaaccttaatctattggtcatagtcag |
33210250 |
T |
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