View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4417-Insertion-5 (Length: 332)
Name: NF4417-Insertion-5
Description: NF4417
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4417-Insertion-5 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 8 - 332
Target Start/End: Original strand, 27428894 - 27429234
Alignment:
| Q |
8 |
caaacaaataatagcgctcatgttctcgcacatacttatcgcagttattttaatgtcattcctta-----------ctatttgtatgaatgttgtaatgc |
96 |
Q |
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| T |
27428894 |
caaacaaataatagcgctcatgttctcgcacatacttatcgcagttattttaatgtcattccttattgtattgctactatttgtatgaatgttgtaatgc |
27428993 |
T |
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| Q |
97 |
taaatttttgaaagtggatatgaccaaacaacatgagaagaatgaagga-----taggataggatatctttgtcctttgcaggccataggtatgtctcaa |
191 |
Q |
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| T |
27428994 |
taaatttttgaaagtggatatgaccaaacaacatgagaagaatgaaggataggataggataggatatctttgtcctttgcaggccataggtatgtctcaa |
27429093 |
T |
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| Q |
192 |
aaatgaaaggctttagagtaggagccaaggattatggacccattacaccttgcattgagacaaacactgcaactaaaacaatgatgattagtgtaataaa |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27429094 |
aaatgaaaggctttagagtaggagccaaggattatggacccattacaccttgcattgagacaaacactgcaactaaaacaatgatgattagtgtaataaa |
27429193 |
T |
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| Q |
292 |
gctttacctccactacctttaccatttaattattggtatta |
332 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
27429194 |
gctttacctccactacctttaccatttaattattggtatta |
27429234 |
T |
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