View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4417_high_6 (Length: 284)
Name: NF4417_high_6
Description: NF4417
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4417_high_6 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 10 - 284
Target Start/End: Complemental strand, 50235384 - 50235110
Alignment:
| Q |
10 |
agcaaaggcaataacagcaccaatgaatctgaatgtggcacgagaagaggcactaggagcaggagcaggtgcatcaccaaaactctcaggtgactcagca |
109 |
Q |
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| T |
50235384 |
agcaaaggcaataacagcaccaatgaatctgaatgtggcacgagaagaggcactaggagcaggagcaggtgcatcaccaaaactctcaggtgactcagca |
50235285 |
T |
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| Q |
110 |
atcaccacagaaggtgatgctgctggtgttgtaacctgaccggcaccggatgttggcacagctgctggtgttgcaacctcaccggcactggatgttgaca |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50235284 |
atcaccacagaaggtgatgctgctggtgttgtaacctgaccggcaccggatgctggcacagctgctggtgttgcaacctcaccggcactggatgttgaca |
50235185 |
T |
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| Q |
210 |
cagctgcaggtgttgctggttttgatagtgttgctggagttgccggagctgaagcaccaaccttaacaattggct |
284 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
50235184 |
cagctgcaggtgttgctggttttgatagtgttgctggagttgctggagctgaagcaccaaccttaacaattggct |
50235110 |
T |
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