View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4417_low_1 (Length: 918)
Name: NF4417_low_1
Description: NF4417
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4417_low_1 |
 | |
|
| [»] scaffold0691 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 841; Significance: 0; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 841; E-Value: 0
Query Start/End: Original strand, 20 - 908
Target Start/End: Original strand, 2790509 - 2791397
Alignment:
| Q |
20 |
tctcaatcatacaccgtgagggggatattgatcaacatgatggaggaattttgcagcgaaactgaaggccctcttttgcagatgttacacaaaatggatg |
119 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2790509 |
tctcaatcattcaccgtgagggggatattgatcaacatgatggaggaattttgtagcgaaactgaaggccctcttttgcagatgttacacaaaatggatg |
2790608 |
T |
|
| Q |
120 |
acaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcgatgatgtatggcaagaagatttttccgaccagattga |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2790609 |
acaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcgatgatgtatggcaagaagatttttccgaccagattga |
2790708 |
T |
|
| Q |
220 |
atttgccattccaaataacaataaaggttgtaggatcataatcaccactagaatgatgcaagttgcagattttttcaagaaatcttttctagttcatgtt |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2790709 |
atttgccattccaaataacaataaaggttgtaggatcataatcaccactagaatgatgcaagttgcagattttttcaagaaatcttttctagttcatgtt |
2790808 |
T |
|
| Q |
320 |
cacaacttgcaacttttgacaccaaacaaagcatgggaactcttctgcaagaaagcattcagatttgagcttgatgggcattgtccaccagagcttaagt |
419 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
2790809 |
cacaacttgcaacttttgacaccaaacaaagcatgggaactcttctgcaagaaagcattcagatttgagcttggtgggcattgtccaccagagcttaagt |
2790908 |
T |
|
| Q |
420 |
ccatgtcaaaagaaattgttcgaaaatgcaatcagctacccctggcaattgtagctgtcagtggtctactttcaacaaaagctaaaaccgtgactgaatg |
519 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2790909 |
tcatgtcaaaagaaattgttcgaaaatgcaagcagctacccctggcaattgtagccgtcagtggtctactttcaacaaaagctaaaaccgtgactgaatg |
2791008 |
T |
|
| Q |
520 |
gaaaatggtgagtcaaaacctgaacctggagttgggacgtaatgcccatttatctagtctaacaaagattttatctctcagttatgatagcctgccctac |
619 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2791009 |
gaaaatggtgagtcaaaacctgaacctggagttgggacgtaatgcccatttatctagtctaacaaagattttatctctgagttatgatagcctgccctac |
2791108 |
T |
|
| Q |
620 |
tacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaactcgacaatggatagccgaagggtttatta |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2791109 |
tacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaactcgacaatggatagccgaagggtttatta |
2791208 |
T |
|
| Q |
720 |
aatgttatgagagacgaactccagaggaagtggcagaggagtacttgtctgaattgattcatagaagtttagttcaagtgtcaattgttgaagggaaagt |
819 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
2791209 |
aatgttatgagagacgaactccagaggaagttgcagaggagtacttgtctgaattgattcatagaagtttagttcaagtctcaattgttgaagggaaagt |
2791308 |
T |
|
| Q |
820 |
tcaaacatgtcaagtccatgatttattccgggaagctctcattagaaaaatgaaggacttaagtttctgtcattgtgtgcatgatgatg |
908 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2791309 |
tcaaacatgtcaagtccatgatttattctgggaagttctcatcagaaaaatgaaggacttaagtttctgtcattgtgtgcatgatgatg |
2791397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 569; E-Value: 0
Query Start/End: Original strand, 20 - 901
Target Start/End: Original strand, 2797550 - 2798437
Alignment:
| Q |
20 |
tctcaatcatacaccgtgagggggatattgatcaacatgatggaggaattttgcagcgaaactgaaggccctcttttgcagatgttacacaaaatggatg |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
2797550 |
tctcaatcatacaccgtgagggggatattgatcaacatgatggaggaattttgtagcgaaactgaaagccctcttttgcagatgttacacaaaatggatg |
2797649 |
T |
|
| Q |
120 |
acaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcgatgatgtatggcaagaagatttttccgaccagattga |
219 |
Q |
| |
|
|||||||| | ||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| |||| |
|
|
| T |
2797650 |
acaagtcattgattatacaagtgaggcaatacctgcaacataaaaagtatttgatattctttgatgatgtatggcaagaagacttttctgaccaggttga |
2797749 |
T |
|
| Q |
220 |
atttgccattccaaataacaataaaggttgtaggatcataatcaccactagaatgatgcaagttgcagattttttcaagaaatcttttctagttcatgtt |
319 |
Q |
| |
|
||||||||| || |||||||| |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
2797750 |
atttgccatgcctaataacaacaaagcaaataggatcatcatcaccacgagaatgatgcaagttgcagattttttcaagaaatcctttcaagttcatgtt |
2797849 |
T |
|
| Q |
320 |
cacaacttgcaacttttgacaccaaacaaagcatgggaactcttctgcaagaaagcattcagatttgagcttgatgggcattgtccaccagagcttaagt |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| | |
|
|
| T |
2797850 |
cacaacttgcaacttttgacaccaaacaaatcatgggaactcttctgcaagaaagcattcagatttgaggttggtgggcattgtccaccagagcttaact |
2797949 |
T |
|
| Q |
420 |
ccatgtcaaaagaaattgttcgaaaatgcaatcagctacccctggcaattgtagctgtcagtggtctactttcaacaaaagctaaaaccgtgactgaatg |
519 |
Q |
| |
|
||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| | |||||||| |||| |||||||||||||| ||||||||||| |
|
|
| T |
2797950 |
ccatgtcaatagaaatagttcgaaaatgcaagcagctacccctggcaattgtagccattggtggtctattttcgacaaaagctaaaactgtgactgaatg |
2798049 |
T |
|
| Q |
520 |
gaaaatggtgagtcaaaacctgaacctggagttgggacgtaatgcccatttatctagtctaacaaagattttatctctcagttatgatagcctgccctac |
619 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||| |||||||| || | |
|
|
| T |
2798050 |
gaaaatggtgagtcaaaatctgaacctggagttgggacgcaatgcccatttaactagtcttacaaagattttatctcttagttacgatagccttcctttt |
2798149 |
T |
|
| Q |
620 |
tacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaactcgacaatggatagccgaagggtttatta |
719 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| ||||||||| | ||| |||||||||||||||||||||||||||| ||||||||| ||| |
|
|
| T |
2798150 |
tacttgaaaccatgcattttgtattttgctatatatcctcaggactattctatcaatcataagagattaactcgacaatggatagctgaagggtttgtta |
2798249 |
T |
|
| Q |
720 |
aatgttatgagagacgaactccagaggaagtggcagaggagtacttgtctgaattgattcatagaagtttagttcaagtgtcaattg------ttgaagg |
813 |
Q |
| |
|
||| | ||||||||||||||| |||| ||| ||||| ||||| ||||||||| | ||||| |||||| | ||||| || |||| || ||||||| |
|
|
| T |
2798250 |
aatctgatgagagacgaactcaagagatagttgcagaagagtatttgtctgaactaattcacagaagtatggttcaggtctcaaatgttggatttgaagg |
2798349 |
T |
|
| Q |
814 |
gaaagttcaaacatgtcaagtccatgatttattccgggaagctctcattagaaaaatgaaggacttaagtttctgtcattgtgtgcat |
901 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
2798350 |
gaaagttcaaacatgccgagtccatgatttattccgggaagtgctcattagaaaaatgaaggatttaagattctgtcattgtgtgcat |
2798437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 545; E-Value: 0
Query Start/End: Original strand, 20 - 907
Target Start/End: Original strand, 2769258 - 2770145
Alignment:
| Q |
20 |
tctcaatcatacaccgtgagggggatattgatcaacatgatggaggaattttg-cagcgaaactgaaggccctcttttgcagatgttacacaaaatggat |
118 |
Q |
| |
|
|||||||||||||| ||||| ||| || |||| || ||||||||| ||||||| ||| |||||||||| ||||| | |||||||||||||||||||| |
|
|
| T |
2769258 |
tctcaatcatacactgtgagagggttactgataaaaatgatggagcaattttgtcag-gaaactgaagaacctctgctaaagatgttacacaaaatggat |
2769356 |
T |
|
| Q |
119 |
gacaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcgatgatgtatggcaagaagatttttccgaccagattg |
218 |
Q |
| |
|
|||| |||||| | || | || ||| ||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
2769357 |
gacatgtcactggtaatagaggtaaggaaatacctacaacataagaggtatttgatattctttgatgatgtatggcaagaagatttttccgaccaggttg |
2769456 |
T |
|
| Q |
219 |
aatttgccattccaaataacaataaaggttgtaggatcataatcaccactagaatgatgcaagttgcagattttttcaagaaatcttttctagttcatgt |
318 |
Q |
| |
|
||||| |||| ||||||||||||||| || ||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2769457 |
aattttccatgccaaataacaataaacgtagtaggatcataataaccacaagaatgatgcatgttgcagattttttcaagaaatcctttctagttcatgt |
2769556 |
T |
|
| Q |
319 |
tcacaacttgcaacttttgacaccaaacaaagcatgggaactcttctgcaagaaagcattcagatttgagcttgatgggcattgtccaccagagcttaag |
418 |
Q |
| |
|
|| ||| ||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || |
|
|
| T |
2769557 |
tcttaacatgcaacttttgcctcctaacaaagcatgggaactcttctgcaagaaagcattcagatttgaacttgatgggcaatgtccaccagagcttcag |
2769656 |
T |
|
| Q |
419 |
tccatgtcaaaagaaattgttcgaaaatgcaatcagctacccctggcaattgtagctgtcagtggtctactttcaacaaaagctaaaaccgtgactgaat |
518 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| | |||||||| ||||||||||| ||||||| ||||||| |
|
|
| T |
2769657 |
tccatgtctaaagaaattgttcgaaaatgcaagcagctacctctggcaattgtagccattggtggtctattttcaacaaaatctaaaacaagaactgaat |
2769756 |
T |
|
| Q |
519 |
ggaaaatggtgagtcaaaacctgaacctggagttgggacgtaatgcccatttatctagtctaacaaagattttatctctcagttatgatagcctgcccta |
618 |
Q |
| |
|
|| ||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||| || || |
|
|
| T |
2769757 |
ggcaaaaggtgagtcaaaagctaaacctggagttgggacgtaatgcccatttatctagtctaacaaagattttgtctcttagttatgatggccttcctta |
2769856 |
T |
|
| Q |
619 |
ctacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaactcgacaatggatagccgaagggtttatt |
718 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||| |||||||||||| |
|
|
| T |
2769857 |
ctacttgaaaccatgcattttgtattttggtatatatcctcaagactattctattaataataagagattaacacggcaatggatagctgaagggtttatt |
2769956 |
T |
|
| Q |
719 |
aaatgttatgagagacgaactccagaggaagtggcagaggagtacttgtctgaattgattcatagaagtttagttcaagtgtcaattgttgaagggaaag |
818 |
Q |
| |
|
|||| | ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
2769957 |
aaatctgatgagagacgaaccccagaagaagttgcagaggagtacttgtctgaattgattcatagaagtttagttcaagtctcaattgttgaagggaaaa |
2770056 |
T |
|
| Q |
819 |
ttcaaacatgtcaagtccatgatttattccgggaagctctcattagaaaaatgaaggacttaagtttctgtcattgtgtgcatgatgat |
907 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2770057 |
ttcaaacatgtcaagtccatgatttattccaggaagttttcattaaaaaaatgaaggacttaagtttctgtcattgtgtgcatgatgat |
2770145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 20 - 899
Target Start/End: Original strand, 2807456 - 2808341
Alignment:
| Q |
20 |
tctcaatcatacaccgtgagggggatattgatcaacatgatggaggaattttg-cagcgaaactgaaggccctcttttgcagatgttacacaaaatggat |
118 |
Q |
| |
|
|||||||||||||| ||||| ||| | |||| |||||||||||| ||||||| ||| |||||||||| ||||||| | | ||||| |||| ||||| |
|
|
| T |
2807456 |
tctcaatcatacactgtgagagggttgatgataaacatgatggagcaattttgtcag-gaaactgaagaccctcttccaaataagttacgcaaattggat |
2807554 |
T |
|
| Q |
119 |
gacaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcgatgatgtatggcaagaagatttttccgaccagattg |
218 |
Q |
| |
|
||||| ||||| ||| || ||||||||||||||||| ||||||| | ||||||||||||||| |||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
2807555 |
gacaaatcactgattgtagaagtgaggcaatacctgcaacataagaggtatttgatattctttgatgatgtatggcaagaagatttttctgaccaggttg |
2807654 |
T |
|
| Q |
219 |
aatttgccattccaaataacaataaaggttgtaggatcataatcaccactagaatgatgcaagttgcagattttttcaagaaatcttttctagttcatgt |
318 |
Q |
| |
|
||||||| || || || |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2807655 |
aatttgctatgcctaacaacaataaaggtagtaggatcataatcacaactagaatgatgcaagttgcagattttttcaagaaatcctttctagttcatgt |
2807754 |
T |
|
| Q |
319 |
tcacaacttgcaacttttgacaccaaacaaagcatgggaactcttctgcaagaaagcattcagatttgagcttgatgggcattgtccaccagagcttaag |
418 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| || ||||||||||| |||||||| |||||| || |
|
|
| T |
2807755 |
tcacaacttgcaacttttgactccaaacaaagcatgggaactcttctgcaagaaagtatttagattcgatcttgatgggcactgtccaccggagcttgag |
2807854 |
T |
|
| Q |
419 |
tccatgtcaaaagaaattgttcgaaaatgcaatcagctacccctggcaattgtagctgtcagtggtctactttcaacaaaagctaaaaccgtgactgaat |
518 |
Q |
| |
|
| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||||| | | |||||||||||||||||| |||||| | | |||| |
|
|
| T |
2807855 |
gctatgtcaatagatattgttcgaaaatgcaagcagctacctttggcaattgtagctattggcggtctactttcaacaaaatataaaacaataatggaat |
2807954 |
T |
|
| Q |
519 |
ggaaaatggtgagtcaaaacctgaacctggagttgggacgtaatgcccatttatctagtctaacaaagattttatctctcagttatgatagcctgcccta |
618 |
Q |
| |
|
|| ||| |||||||||||| |||| | |||||||||||||||||||||||||| | |||||||||||||||||||| || ||||| ||| || ||||||| |
|
|
| T |
2807955 |
gggaaaaggtgagtcaaaatctgagcttggagttgggacgtaatgcccatttaacaagtctaacaaagattttatcactgagttacgatggcttgcccta |
2808054 |
T |
|
| Q |
619 |
ctacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaactcgacaatggatagccgaagggtttatt |
718 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| | ||||| ||| ||||| |||||||||||||||||||||||||||| ||||||||| || |
|
|
| T |
2808055 |
ctacttgaaaccctgcattttgtattttggtatatatccagaggactactctattaatcataagagattaactcgacaatggatagctgaagggtttgtt |
2808154 |
T |
|
| Q |
719 |
aaatgttatgagagacgaactccagaggaagtggcagaggagtacttgtctgaattgattcatagaagtttagttcaagtgtcaattg------ttgaag |
812 |
Q |
| |
|
|||| |||||||| ||||||||||| | | |||||||| ||||||| |||||||||||| |||||| | ||||| || |||| || |||||| |
|
|
| T |
2808155 |
aaatcagatgagagaagaactccagagcatatagcagaggaatacttgtatgaattgattcacagaagtctggttcaggtctcaaatgttggctttgaag |
2808254 |
T |
|
| Q |
813 |
ggaaagttcaaacatgtcaagtccatgatttattccgggaagctctcattagaaaaatgaaggacttaagtttctgtcattgtgtgc |
899 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||| ||| ||| ||||||| ||||||||||| |||||||| ||||||| ||||| |
|
|
| T |
2808255 |
gaaaagttcaaatatgtcaagtccatgatttattgcggcaagtgatcattaggaaaatgaaggatttaagtttttgtcattctgtgc |
2808341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 20 - 903
Target Start/End: Complemental strand, 2838549 - 2837660
Alignment:
| Q |
20 |
tctcaatcatacaccgtgagggggatattgatcaacatgatggaggaattttgcagcgaaactgaaggccctcttttgcagatgttacacaaaatggatg |
119 |
Q |
| |
|
|||||||||||||| ||||| || | ||||| |||||||||||| ||||||| | | |||||||| ||||||| |||||||| ||||||| ||||| |
|
|
| T |
2838549 |
tctcaatcatacactgtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccacagatgttgcacaaaaaggatg |
2838450 |
T |
|
| Q |
120 |
acaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcgatgatgtatggcaagaagatttttccgaccagattga |
219 |
Q |
| |
|
|| ||||||| ||| | |||||||||||||||| ||||||| | ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
2838449 |
accagtcactgattgaagaagtgaggcaatacctccaacataagaggtacttgatattctttgatgatgtttggcaagaagatttttccgaccagattga |
2838350 |
T |
|
| Q |
220 |
atttgccattccaaataacaataaaggttgtaggatcataatcaccactagaatgatgcaagttgcagattttttcaagaaatcttttctagttcatgtt |
319 |
Q |
| |
|
||||||||| || ||||||||||||||| |||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||| |||| || |
|
|
| T |
2838349 |
atttgccatgcctaataacaataaaggtagtaggatcataatcactactagaatgatgcatgttgcagaatttttcaagaaatcctttctaactcatatt |
2838250 |
T |
|
| Q |
320 |
cacaacttgcaacttttgacaccaaacaaagcatgggaactcttctgcaagaaagcattcagatttgagcttgatgggcattgtccaccagagcttaagt |
419 |
Q |
| |
|
|| ||| ||||||||||| | |||||||||||||||||||||||||| ||||||| ||| |||||||| | || ||||||||||||||||||||||||| |
|
|
| T |
2838249 |
cataacctgcaacttttgcctccaaacaaagcatgggaactcttctgtaagaaagtatttagatttgaacctggtgggcattgtccaccagagcttaagg |
2838150 |
T |
|
| Q |
420 |
ccatgtcaaaagaaattgttcgaaaatgcaatcagctacccctggcaattgtagctgtcagtggtctactttcaacaaaagctaaaaccgtgactgaatg |
519 |
Q |
| |
|
| |||||||||||||||||| ||||||||| |||||||| |||||||||||||| | |||||||||||||||||||| ||||||| ||| |||||| |
|
|
| T |
2838149 |
ctgtgtcaaaagaaattgttcaaaaatgcaagcagctacctctggcaattgtagccattggtggtctactttcaacaaaatctaaaacaatgattgaatg |
2838050 |
T |
|
| Q |
520 |
gaaaatggtgagtcaaaacctgaacctggagttgggacgtaatgcccatttatctagtctaacaaagattttatctctcagttatgatagcctgccctac |
619 |
Q |
| |
|
| ||| |||||| |||| ||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
2838049 |
gcaaaacgtgagtgaaaatatgagactggaattgggacgtaatgcccatttaactagtctaacaaagattttatctctcagttatgacagcctgccgtac |
2837950 |
T |
|
| Q |
620 |
tacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaactcgacaatggatagccgaagggtttatta |
719 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||| | || || || ||||| ||| |||| ||||| | ||||||||||| || |||||| | | |
|
|
| T |
2837949 |
tatttaaaaccatgcattttgtattttggtatatatccagaggattactccattaatcataggagactaactaggcaatggatagctgaggggtttgtca |
2837850 |
T |
|
| Q |
720 |
aatgttatgagagacgaactccagaggaagtggcagaggagtacttgtctgaattgattcatagaagtttagttcaagtgtcaattg------ttgaagg |
813 |
Q |
| |
|
||| | |||||||| ||||| ||| ||||||| ||||| |||||||| ||||||||||| |||||| | |||| || |||| || ||||||| |
|
|
| T |
2837849 |
aatctgatgagagaagaactttggagcaagtggctgaggaatacttgtcagaattgattcacagaagtctgattcaggtctcaaatgttggctttgaagg |
2837750 |
T |
|
| Q |
814 |
gaaagttcaaacatgtcaagtccatgatttattccgggaagctctcattagaaaaatgaaggacttaagtttctgtcattgtgtgcatga |
903 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||||| | |||||||||||||||| ||||||||| |
|
|
| T |
2837749 |
gaaagttaaaacatgtcaagtccatgatttattgcgggaagttatcattagaaaaatgaagaatttaagtttctgtcattttgtgcatga |
2837660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 20 - 903
Target Start/End: Complemental strand, 2855759 - 2854870
Alignment:
| Q |
20 |
tctcaatcatacaccgtgagggggatattgatcaacatgatggaggaattttgcagcgaaactgaaggccctcttttgcagatgttacacaaaatggatg |
119 |
Q |
| |
|
|||||||||||||| ||||| || | ||||| |||||||||||| ||||||| | | |||||||| ||||||| | |||||| ||||||||||||| |
|
|
| T |
2855759 |
tctcaatcatacactgtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagaccctcttccactgatgttgcacaaaatggatg |
2855660 |
T |
|
| Q |
120 |
acaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcgatgatgtatggcaagaagatttttccgaccagattga |
219 |
Q |
| |
|
|| ||||||| ||| ||||||| |||||||||||| ||||||| | ||||||| ||||||| |||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
2855659 |
accagtcactgattatacaagtaaggcaatacctgcaacataagaggtatttggtattctttgatgatgtttggcaagaagatttttccgaccaggttga |
2855560 |
T |
|
| Q |
220 |
atttgccattccaaataacaataaaggttgtaggatcataatcaccactagaatgatgcaagttgcagattttttcaagaaatcttttctagttcatgtt |
319 |
Q |
| |
|
||||||||| || ||||||||||||||| |||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||| |||| || |
|
|
| T |
2855559 |
atttgccatgcctaataacaataaaggtagtaggatcataatcactactagaatgatgcatgttgcagaatttttcaagaaatcctttctaactcatatt |
2855460 |
T |
|
| Q |
320 |
cacaacttgcaacttttgacaccaaacaaagcatgggaactcttctgcaagaaagcattcagatttgagcttgatgggcattgtccaccagagcttaagt |
419 |
Q |
| |
|
|| ||| ||||||||||| | |||||||||||||||||||||||||| ||||||| ||| |||||||| | || |||||||||||||||||||||| || |
|
|
| T |
2855459 |
cataacctgcaacttttgcctccaaacaaagcatgggaactcttctgtaagaaagtatttagatttgaacctggtgggcattgtccaccagagcttgagg |
2855360 |
T |
|
| Q |
420 |
ccatgtcaaaagaaattgttcgaaaatgcaatcagctacccctggcaattgtagctgtcagtggtctactttcaacaaaagctaaaaccgtgactgaatg |
519 |
Q |
| |
|
| |||||||||||||||||| ||||||||| |||||||| |||||||||||||| | |||||||||||||||||||| ||||||| ||| |||||| |
|
|
| T |
2855359 |
ctgtgtcaaaagaaattgttctaaaatgcaagcagctacctctggcaattgtagccattggtggtctactttcaacaaaatctaaaacaatgattgaatg |
2855260 |
T |
|
| Q |
520 |
gaaaatggtgagtcaaaacctgaacctggagttgggacgtaatgcccatttatctagtctaacaaagattttatctctcagttatgatagcctgccctac |
619 |
Q |
| |
|
| ||| |||||| |||| ||| |||| ||||||||||||||||||||| | | |||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
2855259 |
gcaaaacgtgagtgaaaatatgagattggaattgggacgtaatgcccatttaaccaatctaacaaagattttatctctcagttatgacagcctgccgtac |
2855160 |
T |
|
| Q |
620 |
tacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaactcgacaatggatagccgaagggtttatta |
719 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||| | || || || ||||| ||| |||| ||||| | ||||||||||| || |||||| | | |
|
|
| T |
2855159 |
tatttaaaaccatgcattttgtattttggtatatatccagaggattactccattaatcataggagactaactaggcaatggatagctgaggggtttgtca |
2855060 |
T |
|
| Q |
720 |
aatgttatgagagacgaactccagaggaagtggcagaggagtacttgtctgaattgattcatagaagtttagttcaagtgtcaattg------ttgaagg |
813 |
Q |
| |
|
||| | |||||||| ||||| ||| ||||||| ||||| |||||||| ||||||||||| |||||| | |||| || |||| || ||||||| |
|
|
| T |
2855059 |
aatctgatgagagaagaactttggagcaagtggctgaggaatacttgtcagaattgattcacagaagtctgattcaggtctcaaatgttggctttgaagg |
2854960 |
T |
|
| Q |
814 |
gaaagttcaaacatgtcaagtccatgatttattccgggaagctctcattagaaaaatgaaggacttaagtttctgtcattgtgtgcatga |
903 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||| |||||||| |
|
|
| T |
2854959 |
gaaagttaaaacatgtcaagtccatgatttattgcgggaagtgatcattagaaaaatgaagaatttaagtttctgtcatttcgtgcatga |
2854870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 20 - 908
Target Start/End: Original strand, 2759403 - 2760297
Alignment:
| Q |
20 |
tctcaatcatacaccgtgagggggatattgatcaacatgatggaggaattttg-cagcgaaactgaaggccctcttttgcagatgttacacaaaatggat |
118 |
Q |
| |
|
|||||||||||||| ||||| || || |||| || ||||||| | ||||||| ||| |||||||||| ||||||| ||| |||||||||||||||| |
|
|
| T |
2759403 |
tctcaatcatacactgtgagaggattactgataaaaatgatggcgcaattttgtcag-gaaactgaagaccctcttccaaagaagttacacaaaatggat |
2759501 |
T |
|
| Q |
119 |
gacaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcgatgatgtatggcaagaagatttttccgaccagattg |
218 |
Q |
| |
|
|||| |||||| ||| | | || ||| ||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
2759502 |
gacaggtcactgattacagaggtaaggaaatacctagaacataagaggtatttgatattctttgatgatgtatggcaagaagatttttccgaccaggttg |
2759601 |
T |
|
| Q |
219 |
aatttgccattccaaataacaataaaggttgtaggatcataatcaccactagaatgatgcaagttgcagattttttcaagaaatcttttctagttcatgt |
318 |
Q |
| |
|
|||||||||| || |||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2759602 |
aatttgccatgcctaataacaacaaaggtagtaggatcataatcaccactagaattatgcaagttgcagattttttcaagaaatcatttctagttcatgt |
2759701 |
T |
|
| Q |
319 |
tcacaacttgcaacttttgacaccaaacaaagcatgggaactcttctgcaagaaagcattcagatttgagcttgatgggcattgtccaccagagcttaag |
418 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| ||| |||| |||| ||||||||| |||||| || |
|
|
| T |
2759702 |
tcacaacttgcaacttttgactccaaacaaagcatgggaactcttctgcaagaaagtatttagatatgatcttggagggcgttgtccaccggagcttgag |
2759801 |
T |
|
| Q |
419 |
tccatgtcaaaagaaattgttcgaaaatgcaatcagctacccctggcaattgtagctgtcagtggtctactttcaacaaaagctaaaaccgtgactgaat |
518 |
Q |
| |
|
| || ||||||||||||| | ||| | ||| || ||||| || |||||||| || || ||||||||||||||||||| |||||||| ||| ||||| |
|
|
| T |
2759802 |
gctgtggcaaaagaaattgtgcaaaagttcaagcaactacctcttgcaattgtggccgttgctggtctactttcaacaaaatctaaaaccatgattgaat |
2759901 |
T |
|
| Q |
519 |
ggaaaatggtgagtcaaaacctgaacctggagttgggacgtaatgcccatttatctagtctaacaaagattttatctctcagttatgatagcctgcccta |
618 |
Q |
| |
|
|| ||| |||||||||||| ||| |||||||||||| ||||| |||||||| | ||||||||||||||||| || || ||||||||| ||||||| | |
|
|
| T |
2759902 |
ggcaaaaggtgagtcaaaatttgagcctggagttggggtgtaatacccatttaacgagtctaacaaagattttgtcgcttagttatgatggcctgcctca |
2760001 |
T |
|
| Q |
619 |
ctacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaactcgacaatggatagccgaagggtttatt |
718 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| | || | | || || || ||| ||||||||||| ||||||| ||| ||||||||| || |
|
|
| T |
2760002 |
ctacttgaaaccatgcattttgtattttggtttatatccagaggattttgctattcatcataggagattaactcaacaatgggcagctgaagggtttgtt |
2760101 |
T |
|
| Q |
719 |
aaatgttatgagagacgaactccagaggaagtggcagaggagtacttgtctgaattgattcatagaagtttagttcaagtgtcaattg------ttgaag |
812 |
Q |
| |
|
|||| | ||| |||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |||| ||||| || || |||||| |
|
|
| T |
2760102 |
aaatctgatgggagaagaactccagagcaagttgcagaggagtacttgtctgaattgattcagagaagtctagtccaagtctcggatgttaactttgaag |
2760201 |
T |
|
| Q |
813 |
ggaaagttcaaacatgtcaagtccatgatttattccgggaagctctcattagaaaaatgaaggacttaagtttctgtcattgtgtgcatgatgatg |
908 |
Q |
| |
|
||||||| || ||||||||||||||||||||||| ||||||| ||||||||||||||||||| || |||||||| |||||| |||||||||||| |
|
|
| T |
2760202 |
ggaaagtacatacatgtcaagtccatgatttattgcgggaagtgatcattagaaaaatgaaggatttgagtttctgccattgtatgcatgatgatg |
2760297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 20 - 900
Target Start/End: Original strand, 5413075 - 5413961
Alignment:
| Q |
20 |
tctcaatcatacaccgtgagggggatattgatcaacatgatggaggaattttgcagcgaaactgaaggccctcttttgcagatgttacacaaaatggatg |
119 |
Q |
| |
|
|||||||||||||| ||||| || | ||||| |||||||||||| ||||||| | | |||||||| | ||||| ||||||||||||||||||||||| |
|
|
| T |
5413075 |
tctcaatcatacactgtgagaggtttgttgataaacatgatggagcaattttgtcggggaactgaagactctcttccgcagatgttacacaaaatggatg |
5413174 |
T |
|
| Q |
120 |
acaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcgatgatgtatggcaagaagatttttccgaccagattga |
219 |
Q |
| |
|
|| |||||| ||| || ||||||||||||||||| ||||||| | ||||||||||||||| ||||||||||||||| ||||||| || |||||| |||| |
|
|
| T |
5413175 |
accggtcactgattatagaagtgaggcaatacctgcaacataagaggtatttgatattctttgatgatgtatggcaacaagatttctctgaccaggttga |
5413274 |
T |
|
| Q |
220 |
atttgccattccaaataacaataaaggttgtaggatcataatcaccactagaatgatgcaagttgcagattttttcaagaaatcttttctagttcatgtt |
319 |
Q |
| |
|
|||||| || || || |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||| |
|
|
| T |
5413275 |
atttgcgatgcctaaaaacaataaaggtagtaggatcataatcaccactagaatgatgcaagttgcggattttttcaaaaaatcctttctagtatatgtt |
5413374 |
T |
|
| Q |
320 |
cacaacttgcaacttttgacaccaaacaaagcatgggaactcttctgcaagaaagcattcagatttgagcttgatgggcattgtccaccagagcttaagt |
419 |
Q |
| |
|
|||||| ||||||||||| | |||||||||||||||||||| | ||||||||| | || ||||||| |||| |||| |||||||| | |||||| || |
|
|
| T |
5413375 |
cacaacctgcaacttttgcctccaaacaaagcatgggaactttactgcaagaaggtgtttggatttgaacttggtgggaattgtccatcggagcttcagg |
5413474 |
T |
|
| Q |
420 |
ccatgtcaaaagaaattgttcgaaaatgcaatcagctacccctggcaattgtagctgtcagtggtctactttcaacaaaagctaaaaccgtgactgaatg |
519 |
Q |
| |
|
| || ||||||||||||||||||||||| ||||| || || | ||||||||| | |||||||||||||||||||| ||||||| | | |||||| |
|
|
| T |
5413475 |
atgtatcgaaagaaattgttcgaaaatgcaagcagcttcctctagaaattgtagccattggtggtctactttcaacaaaatctaaaacaattattgaatg |
5413574 |
T |
|
| Q |
520 |
gaaaatggtgagtcaaaacctgaacctggagttgggacgtaatgcccatttatctagtctaacaaagattttatctctcagttatgatagcctgccctac |
619 |
Q |
| |
|
| ||| |||||||||||| |||| |||||| || |||||||||||||||||| | ||||||||||||||| | || || ||||| ||| |||| || ||| |
|
|
| T |
5413575 |
gcaaaaggtgagtcaaaatctgagcctggaattaggacgtaatgcccatttaacgagtctaacaaagattctgtcacttagttacgatggccttccttac |
5413674 |
T |
|
| Q |
620 |
tacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaactcgacaatggatagccgaagggtttatta |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| | |||||| | ||||| ||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
5413675 |
tacttgaaaccatgcattttgtattttggtttatatccagaggactatgttattaatcataggagattaactcgacaatggatagctgaagggtttgttc |
5413774 |
T |
|
| Q |
720 |
aatgttatgagagacgaactccagaggaagtggcagaggagtacttgtctgaattgattcatagaagtttagttcaagtgtcaattg------ttgaagg |
813 |
Q |
| |
|
||| | |||||| ||||||| ||| |||| |||||||| |||||||||||||||||||| |||||| | ||||| || |||| || ||||||| |
|
|
| T |
5413775 |
aattgcaagagagaagaactccggagcaagttgcagaggaatacttgtctgaattgattcaaagaagtctggttcaggtctcaaatgttggctttgaagg |
5413874 |
T |
|
| Q |
814 |
gaaagttcaaacatgtcaagtccatgatttattccgggaagctctcattagaaaaatgaaggacttaagtttctgtcattgtgtgca |
900 |
Q |
| |
|
|||||||||||||||||||| ||||||||| | ||||||| ||||||||||||||||||| ||||||||| ||||| ||||||| |
|
|
| T |
5413875 |
aaaagttcaaacatgtcaagtacatgatttactgcgggaagtgatcattagaaaaatgaaggatttaagtttcggtcatagtgtgca |
5413961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 90 - 903
Target Start/End: Original strand, 2749254 - 2750073
Alignment:
| Q |
90 |
ctcttttgcagatgttacacaaaatggatgacaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcgatgatgt |
189 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||| ||| || ||||||||||||||||| ||||||| | ||||||||||||||| ||||| || |
|
|
| T |
2749254 |
ctcttctgcagatgttacacaaaatggatgaccagtcactaattatagaagtgaggcaatacctgcaacataagaggtatttgatattctttgatgacgt |
2749353 |
T |
|
| Q |
190 |
atggcaagaagatttttccgaccagattgaatttgccattccaaataacaataaaggttgtaggatcataatcaccactagaatgatgcaagttgcagat |
289 |
Q |
| |
|
|||||||||||||||| | |||||| || |||||||||| |||||||||||||||||| ||||||| || |||||||||||||||||| | ||||||||| |
|
|
| T |
2749354 |
atggcaagaagattttgcggaccaggttcaatttgccatgccaaataacaataaaggtagtaggattatcatcaccactagaatgatgtatgttgcagat |
2749453 |
T |
|
| Q |
290 |
tttttcaagaaatcttttctagttcatgttcacaacttgcaacttttgacaccaaacaaagcatgggaactcttctgcaagaaagcattcagatttgagc |
389 |
Q |
| |
|
|||||||| ||||| |||||| |||| |||||||| ||||||||||| | |||||||||||||||||||| |||||||||| || ||| |||| ||||| |
|
|
| T |
2749454 |
tttttcaaaaaatcctttctaactcatattcacaacctgcaacttttgcctccaaacaaagcatgggaacttttctgcaagagagtatttagatatgagc |
2749553 |
T |
|
| Q |
390 |
ttgatgggcattgtccaccagagcttaagtccatgtcaaaagaaattgttcgaaaatgcaatcagctacccctggcaattgtagctgtcagtggtctact |
489 |
Q |
| |
|
||| ||| ||||||||| |||| ||| || | |||||||||||||||||| ||| |||| |||||||| || |||||||||||| | ||||| |||| |
|
|
| T |
2749554 |
ttggtggacattgtccatcagaacttgaggctgtgtcaaaagaaattgttcaaaagtgcaggcagctacctctagcaattgtagctattggtggtttact |
2749653 |
T |
|
| Q |
490 |
ttcaacaaaagctaaaaccgtgactgaatggaaaatggtgagtcaaaacctgaacctggagttgggacgtaatgcccatttatctagtctaacaaagatt |
589 |
Q |
| |
|
|||||||||| ||||||| ||| ||||||| ||| ||||||| |||| |||| ||||| || |||||||||||||||||| | ||||| ||||||| |
|
|
| T |
2749654 |
ttcaacaaaatctaaaacaatgattgaatggcaaaaggtgagtgaaaatctgagtctggaattaggacgtaatgcccatttaacgtgtctagtaaagatt |
2749753 |
T |
|
| Q |
590 |
ttatctctcagttatgatagcctgccctactacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaa |
689 |
Q |
| |
|
|||| || ||||||||| | || || || |||||||||||||||||||||||||||||| |||| || | |||||| | ||||| ||| |||||||| |
|
|
| T |
2749754 |
ctatcacttagttatgatggacttccttattacttgaaaccatgcattttgtattttggtttatacccagaggactatgcaattaatcataggagattaa |
2749853 |
T |
|
| Q |
690 |
ctcgacaatggatagccgaagggtttattaaatgttatgagagacgaactccagaggaagtggcagaggagtacttgtctgaattgattcatagaagttt |
789 |
Q |
| |
|
|||||||||||||||| ||||||||| | |||| | |||||| ||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
2749854 |
ctcgacaatggatagctgaagggtttgtaaaattggaagagagaagaactccagagcaagttgcagaagagtacttgtctgaattgattcagagaagttt |
2749953 |
T |
|
| Q |
790 |
agttcaagtgtcaattg------ttgaagggaaagttcaaacatgtcaagtccatgatttattccgggaagctctcattagaaaaatgaaggacttaagt |
883 |
Q |
| |
|
||||| || |||| || ||||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| |||| | |
|
|
| T |
2749954 |
ggttcaggtctcaaatgttggctttgaaggaaaagttcaaacatgtcaagtccatgatttaatgcgggaattgatcattagaaaaatgaaggatttaaat |
2750053 |
T |
|
| Q |
884 |
ttctgtcattgtgtgcatga |
903 |
Q |
| |
|
||| ||||||| ||||||| |
|
|
| T |
2750054 |
ttcggtcattgcatgcatga |
2750073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 99 - 908
Target Start/End: Original strand, 2818825 - 2819643
Alignment:
| Q |
99 |
agatgttacacaaaatggatgacaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcgatgatgtatggcaaga |
198 |
Q |
| |
|
|||| |||| |||||||||||||| || ||| ||| || | || ||| ||||||| ||||||| | |||||| |||||||| ||||||||||||||||| |
|
|
| T |
2818825 |
agattttacgcaaaatggatgacaggttactgattatagaggtaaggaaatacctagaacataagaggtatttaatattctttgatgatgtatggcaaga |
2818924 |
T |
|
| Q |
199 |
agatttttccgaccagattgaatttgccattccaaataacaataaaggttgtaggatcataatcaccactagaatgatgcaagttgcagattttttcaag |
298 |
Q |
| |
|
|||||||||||||||| ||||||||||||| || |||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
2818925 |
agatttttccgaccaggttgaatttgccatgcccaataacaacaaaggtagtaggatcataatcaccacaagaatgatgcaagttgcagattttttcaag |
2819024 |
T |
|
| Q |
299 |
aaatcttttctagttcatgttcacaacttgcaacttttgacaccaaacaaagcatgggaactcttctgcaagaaagcattcagatttgagcttgatgggc |
398 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| || | |||||||| ||| | |
|
|
| T |
2819025 |
aaatcatttctagttcatgttcacaacttgcaacttttgactccaaacaaagcatgggaactcttctgcaagaaagtatttaggtctgagcttggtggtc |
2819124 |
T |
|
| Q |
399 |
attgtccaccagagcttaagtccatgtcaaaagaaattgttcgaaaatgcaatcagctacccctggcaattgtagctgtcagtggtctactttcaacaaa |
498 |
Q |
| |
|
||||||||| || ||| || || ||||||||||||||| ||||| ||| || |||| ||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
2819125 |
gttgtccaccggaacttgaggttgtggcaaaagaaattgttcaaaaattcaagcaattacctttggcaatcgtagccattggtggtctactttcaacaaa |
2819224 |
T |
|
| Q |
499 |
agctaaaaccgtgactgaatggaaaatggtgagtcaaaacctgaacctggagttgggacgtaatgcccatttatctagtctaacaaagattttatctctc |
598 |
Q |
| |
|
| |||||||| ||| |||||| ||| |||||||||||| ||| ||||||||||| |||||||||||||||| | ||||||||||||||||| || || |
|
|
| T |
2819225 |
atctaaaaccatgatcgaatggcaaaaggtgagtcaaaatttgagcctggagttggaacgtaatgcccatttaacgagtctaacaaagattttgtcgctt |
2819324 |
T |
|
| Q |
599 |
agttatgatagcctgccctactacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaactcgacaat |
698 |
Q |
| |
|
||||||||| |||| || ||||| |||||||||||||||||||||||||| |||| || | |||||| || ||| | || |||| |||||||||||| |
|
|
| T |
2819325 |
agttatgatggcctccctcactacctgaaaccatgcattttgtattttggtttatacccagaggactatgctattagtcatgggagaataactcgacaat |
2819424 |
T |
|
| Q |
699 |
ggatagccgaagggtttatt-aaatgtta--tgagagacgaactccagaggaagtggcagaggagtacttgtctgaattgattcatagaagtttagttca |
795 |
Q |
| |
|
||||||| ||||||||| || |||| | | || |||| ||||||||||| |||| ||||||||||||||||||||| ||||||| |||||| | ||||| |
|
|
| T |
2819425 |
ggatagctgaagggtttgttcaaatatcagttgggagaagaactccagagcaagttgcagaggagtacttgtctgaactgattcagagaagtctggttca |
2819524 |
T |
|
| Q |
796 |
agtgtcaattg------ttgaagggaaagttcaaacatgtcaagtccatgatttattccgggaagctctcattagaaaaatgaaggacttaagtttctgt |
889 |
Q |
| |
|
||| || || ||||||| |||||| | | ||||||||||||||||||||| ||||||| |||||| |||||| ||||| ||||| || ||| |
|
|
| T |
2819525 |
agtctcggatgttgactttgaaggtaaagttgataaatgtcaagtccatgatttattgcgggaagtgatcattacaaaaataaaggatttaagattttgt |
2819624 |
T |
|
| Q |
890 |
cattgtgtgcatgatgatg |
908 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
2819625 |
cattgtgtgcatgatgatg |
2819643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 574 - 720
Target Start/End: Complemental strand, 3321627 - 3321481
Alignment:
| Q |
574 |
tagtctaacaaagattttatctctcagttatgatagcctgccctactacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgtt |
673 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||| ||| | |||||| ||||||| | |||||||||||||||||| | ||||| || | |
|
|
| T |
3321627 |
tagtctaacaaagattttatctcttagttatgatgatttgccttaccatttgaaatcatgcatgctatattttggtatatatcctgaggactactccatc |
3321528 |
T |
|
| Q |
674 |
aataataagagattaactcgacaatggatagccgaagggtttattaa |
720 |
Q |
| |
|
||| |||||| | ||||| |||||||| || ||||||||| |||| |
|
|
| T |
3321527 |
aatcggaagagacttactcggcaatggatggcagaagggtttgttaa |
3321481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 573 - 658
Target Start/End: Complemental strand, 3310029 - 3309944
Alignment:
| Q |
573 |
ctagtctaacaaagattttatctctcagttatgatagcctgccctactacttgaaaccatgcattttgtattttggtatatatcct |
658 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |||| || |||||||| | ||||| |||||||||||||||||||| |
|
|
| T |
3310029 |
ctagtctaacaaagattttatctcttagttatgatgatttgcctcaccacttgaaatcttgcatgctgtattttggtatatatcct |
3309944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 263 - 378
Target Start/End: Original strand, 3201376 - 3201491
Alignment:
| Q |
263 |
accactagaatgatgcaagttgcagattttttcaagaaatcttttctagttcatgttcacaacttgcaacttttgacaccaaacaaagcatgggaactct |
362 |
Q |
| |
|
|||| |||||||||||| || || || | ||| |||||||||||||| |||||| ||||| || | |||| |||| | ||||||||||| |||||||| | |
|
|
| T |
3201376 |
accagtagaatgatgcatgtagctgaatattttaagaaatcttttcttgttcatattcaccacctacaacctttgcctccaaacaaagcgtgggaactgt |
3201475 |
T |
|
| Q |
363 |
tctgcaagaaagcatt |
378 |
Q |
| |
|
| ||||| || ||||| |
|
|
| T |
3201476 |
tttgcaacaaggcatt |
3201491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 807 - 902
Target Start/End: Complemental strand, 3356522 - 3356427
Alignment:
| Q |
807 |
ttgaagggaaagttcaaacatgtcaagtccatgatttattccgggaagctctcattagaaaaatgaaggacttaagtttctgtcattgtgtgcatg |
902 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||||||||| || || |||| |||||| ||||||||| || |||||||| ||||||| ||||||| |
|
|
| T |
3356522 |
ttgatgggaaagttaaaagatgtcaagtccatgatttgttgcgtgaagtggtcattaaaaaaatgaaagatttaagtttttgtcattcagtgcatg |
3356427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0691 (Bit Score: 415; Significance: 0; HSPs: 1)
Name: scaffold0691
Description:
Target: scaffold0691; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 20 - 903
Target Start/End: Complemental strand, 6101 - 5212
Alignment:
| Q |
20 |
tctcaatcatacaccgtgagggggatattgatcaacatgatggaggaattttgcagcgaaactgaaggccctcttttgcagatgttacacaaaatggatg |
119 |
Q |
| |
|
|||||| ||||||||||||| ||| || | || |||||||||||| ||||||| | |||||||||| ||||||| ||| ||||||||||||||||||| |
|
|
| T |
6101 |
tctcaaacatacaccgtgagagggttactcataaacatgatggagcaattttgtcgggaaactgaagaccctcttccgcaaatgttacacaaaatggatg |
6002 |
T |
|
| Q |
120 |
acaagtcactcattctacaagtgaggcaatacctgaaacataaaaagtatttgatattcttcgatgatgtatggcaagaagatttttccgaccagattga |
219 |
Q |
| |
|
|||||||| | ||| || ||||||||||||||||| ||||||| | ||||||||||||||| |||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
6001 |
acaagtcattaattatagaagtgaggcaatacctgcaacataagaggtatttgatattctttgatgatgtatggcaagaagatttttctgaccaggttga |
5902 |
T |
|
| Q |
220 |
atttgccattccaaataacaataaaggttgtaggatcataatcaccactagaatgatgcaagttgcagattttttcaagaaatcttttctagttcatgtt |
319 |
Q |
| |
|
||||||||| || ||||||||||||||| ||||||| ||||||||||| |||||||||| ||||| || |||||||||||||| ||| ||||||||||| |
|
|
| T |
5901 |
atttgccatgcctaataacaataaaggtagtaggattataatcaccacaagaatgatgcttgttgccgaatttttcaagaaatcctttatagttcatgtt |
5802 |
T |
|
| Q |
320 |
cacaacttgcaacttttgacaccaaacaaagcatgggaactcttctgcaagaaagcattcagatttgagcttgatgggcattgtccaccagagcttaagt |
419 |
Q |
| |
|
||||| ||||||| ||| | |||||||||| |||||||||||||||||| |||| ||| |||||||| | || |||||||||||||| |||||| || |
|
|
| T |
5801 |
cacaaactgcaactcttgcctccaaacaaagtatgggaactcttctgcaaaaaagtatttagatttgaacctggtgggcattgtccacttgagcttgagg |
5702 |
T |
|
| Q |
420 |
ccatgtcaaaagaaattgttcgaaaatgcaatcagctacccctggcaattgtagctgtcagtggtctactttcaacaaaagctaaaaccgtgactgaatg |
519 |
Q |
| |
|
| | ||||||||||||||| ||||||||| |||||||| || ||||||||||| | |||||||||||||||||||| ||||||| || |||||| |
|
|
| T |
5701 |
ctgtatcaaaagaaattgttaaaaaatgcaagcagctacctcttgcaattgtagccattggtggtctactttcaacaaaatctaaaacaatggttgaatg |
5602 |
T |
|
| Q |
520 |
gaaaatggtgagtcaaaacctgaacctggagttgggacgtaatgcccatttatctagtctaacaaagattttatctctcagttatgatagcctgccctac |
619 |
Q |
| |
|
| ||| |||||||||||| ||| ||| ||||||| |||||||||||||||| | ||||||||||||||||| || || ||||||||| ||||||| ||| |
|
|
| T |
5601 |
gcaaaaggtgagtcaaaatttgagcctagagttggaacgtaatgcccatttaacgagtctaacaaagattttgtcacttagttatgatggcctgccttac |
5502 |
T |
|
| Q |
620 |
tacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaactcgacaatggatagccgaagggtttatta |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||||||||||| ||||||||||| ||||||||| ||| |
|
|
| T |
5501 |
tacttgaaaccatgcattttgtattttggtatatatccagaggactattctattaatcataagagattaactcgtcaatggatagctgaagggtttgtta |
5402 |
T |
|
| Q |
720 |
aatgttatgagagacgaactccagaggaagtggcagaggagtacttgtctgaattgattcatagaagtttagttcaagtgtcaattg------ttgaagg |
813 |
Q |
| |
|
| | | ||||||||| |||||| ||| |||| ||||| ||||||||||||||||||||||| |||||| | ||||| || |||| || |||| || |
|
|
| T |
5401 |
agtatgatgagagacaaactcccgagcaagttgcagatgagtacttgtctgaattgattcacagaagtctggttcaggtctcaaatgttggctttgaggg |
5302 |
T |
|
| Q |
814 |
gaaagttcaaacatgtcaagtccatgatttattccgggaagctctcattagaaaaatgaaggacttaagtttctgtcattgtgtgcatga |
903 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| |||| ||| ||||||||||||||||| |
|
|
| T |
5301 |
gaaagttcaaacatgtcaagtccatgatttattgcgtgaagtgatcattagaaaaatgaaggatttaactttttgtcattgtgtgcatga |
5212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 620 - 722
Target Start/End: Complemental strand, 11116848 - 11116747
Alignment:
| Q |
620 |
tacttgaaaccatgcattttgtattttggtatatatcctcaagactattctgttaataataagagattaactcgacaatggatagccgaagggtttatta |
719 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| | |||||| || ||||| | | |||||||||||||| ||||||||| ||||||||| ||| |
|
|
| T |
11116848 |
tacttgaaaccatgcattttgtattttggtgtatatccagaggactatgctattaatcacaggagattaactcgac-atggatagctgaagggtttgtta |
11116750 |
T |
|
| Q |
720 |
aat |
722 |
Q |
| |
|
||| |
|
|
| T |
11116749 |
aat |
11116747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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