View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4417_low_14 (Length: 207)
Name: NF4417_low_14
Description: NF4417
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4417_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 7468454 - 7468626
Alignment:
| Q |
18 |
caggctacatatgcgatccaagtttggatcccaaaaattagcaaaagaaaaaccttcttgattacctgcagttgtggttccatcctttttgaatgcaggt |
117 |
Q |
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| T |
7468454 |
caggctacatatgcgatccaagtttggatcccaaaaattagcaaaagaaaaaccttcttgattacctgcagttgtggttccatcctttttgaatgcaggt |
7468553 |
T |
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| Q |
118 |
ttcagctttgcaagatctaccaaatttgcatttggccggataccatcatcaacagaaacaataatttgtttct |
190 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7468554 |
ttcagctttgcaagatctaccaaatttgcatttggccggataccatcatcaacagaaacaataatttgtttct |
7468626 |
T |
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