View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4418_low_30 (Length: 277)
Name: NF4418_low_30
Description: NF4418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4418_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 5 - 267
Target Start/End: Original strand, 45699114 - 45699381
Alignment:
| Q |
5 |
ctccactaaaactaataaattgtggtgtccataaaaaattcgctcag-----gaaatgactaattcaacaactcatgagtacaccttatatgaatatatc |
99 |
Q |
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| T |
45699114 |
ctccactaaaactaataaattgtggtgtccataaaaaattcgctcagacgtggaaatgactaattcaacaactcatgagtacaccttatatgaatatatc |
45699213 |
T |
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| Q |
100 |
cacctgcatgcatgtcacaaattatgatatggaaaaacatttaggttaatggattctctcactagactcccttataaagtgttcaacatcaactatttca |
199 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45699214 |
cacctgcatgcatgtcgcaaattatgatatggaaaaacatttaggtttatggattcactcactagactcccttataaagtgttcaacatcaactatttca |
45699313 |
T |
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| Q |
200 |
tttaacgtgaaactcttactcaaaattaataatataccaagagaatttttgtttttgtttcacaggtt |
267 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45699314 |
tttaacgtgaaactcttactcaaaattaataatataccaagagaatttttgtttttgtttcacaggtt |
45699381 |
T |
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